Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:02:59 (2706380): wrapper (7.7.26015): starting
00:02:59 (2706380): wrapper: running run_atlas (--nthreads 12)
[2026-01-09 00:02:59] Arguments: --nthreads 12
[2026-01-09 00:02:59] Threads: 12
[2026-01-09 00:02:59] Checking for CVMFS
[2026-01-09 00:03:00] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 00:03:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 00:03:01] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 00:03:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 00:03:02] 2.13.3.0 5924 21064 178900 154931 3 90 35906252 39288833 9070 16776704 0 9180894 99.561 15512004 42289 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-09 00:03:02] CVMFS is ok
[2026-01-09 00:03:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 00:03:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 00:03:02] Further information can be found at the LHC@home message board.
[2026-01-09 00:03:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 00:03:02] Checking for apptainer binary...
[2026-01-09 00:03:02] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 00:03:02] Running /usr/bin/apptainer --version
[2026-01-09 00:03:03] apptainer version 1.4.5-2.el9
[2026-01-09 00:03:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 00:03:04] c-210-3.aglt2.org
[2026-01-09 00:03:04] apptainer works
[2026-01-09 00:03:04] Set ATHENA_PROC_NUMBER=12
[2026-01-09 00:03:04] Set ATHENA_CORE_NUMBER=12
[2026-01-09 00:03:04] Starting ATLAS job with PandaID=6963152175
[2026-01-09 00:03:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 13:59:20]  *** The last 200 lines of the pilot log: ***
[2026-01-09 13:59:20] 2026-01-09 18:58:47,206 | INFO     | sufficient remaining disk space (53302263808 B)
[2026-01-09 13:59:20] 2026-01-09 18:58:47,207 | INFO     | work directory size check will use 4404019200 B as a max limit (20% grace limit added, divider=1)
[2026-01-09 13:59:20] 2026-01-09 18:58:47,211 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6963152175/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 13:59:20] 2026-01-09 18:58:47,212 | INFO     | extracted standard info from prmon json
[2026-01-09 13:59:20] 2026-01-09 18:58:47,212 | INFO     | size of work directory /tmp/boinchome/slots/2/PanDA_Pilot-6963152175: 4425277 B (within 4404019200 B limit)
[2026-01-09 13:59:20] 2026-01-09 18:58:47,212 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 13:59:20] 2026-01-09 18:58:47,212 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 13:59:20] 2026-01-09 18:58:47,213 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 13:59:20] 2026-01-09 18:58:47,213 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 13:59:20] 2026-01-09 18:58:47,212 | INFO     | pfn file=/tmp/boinchome/slots/2/PanDA_Pilot-6963152175/HITS.47898826._028976.pool.root.1 does not exist (skip from workdir size calculation)
[2026-01-09 13:59:20] 2026-01-09 18:58:47,214 | INFO     | total size of present files: 0 B (workdir size: 4425277 B)
[2026-01-09 13:59:20] 2026-01-09 18:58:47,230 | INFO     | fitting pss+swap vs Time
[2026-01-09 13:59:20] 2026-01-09 18:58:47,232 | INFO     | sum of square deviations: 170347277273.03308
[2026-01-09 13:59:20] 2026-01-09 18:58:47,232 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/2/PanDA_Pilot-6963152175/HITS.47898826._028976.pool.root.1 since it does not exist
[2026-01-09 13:59:20] 2026-01-09 18:58:47,248 | INFO     | sum of deviations: 716661547068.4484
[2026-01-09 13:59:20] 2026-01-09 18:58:47,248 | INFO     | mean x: 1767960149.4542124
[2026-01-09 13:59:20] 2026-01-09 18:58:47,248 | INFO     | mean y: 2668004.9719169717
[2026-01-09 13:59:20] 2026-01-09 18:58:47,249 | INFO     | intersect: -7435249854.04043
[2026-01-09 13:59:20] 2026-01-09 18:58:47,250 | INFO     | chi2: 4.217843362773301
[2026-01-09 13:59:20] 2026-01-09 18:58:47,251 | INFO     | sum of square deviations: 167246773074.89447
[2026-01-09 13:59:20] 2026-01-09 18:58:47,268 | INFO     | sum of deviations: 770695130305.9972
[2026-01-09 13:59:20] 2026-01-09 18:58:47,268 | INFO     | mean x: 1767959996.963145
[2026-01-09 13:59:20] 2026-01-09 18:58:47,268 | INFO     | mean y: 2670647.7665847666
[2026-01-09 13:59:20] 2026-01-09 18:58:47,268 | INFO     | intersect: -8144321579.253166
[2026-01-09 13:59:20] 2026-01-09 18:58:47,270 | INFO     | chi2: 3.4224078503229363
[2026-01-09 13:59:20] 2026-01-09 18:58:47,270 | INFO     | current chi2=3.4224078503229363 (change=18.85882058757519 %)
[2026-01-09 13:59:20] 2026-01-09 18:58:47,270 | INFO     | right removable region: 813
[2026-01-09 13:59:20] 2026-01-09 18:58:47,271 | INFO     | sum of square deviations: 167246046564.89444
[2026-01-09 13:59:20] 2026-01-09 18:58:47,287 | INFO     | sum of deviations: 485667001850.14966
[2026-01-09 13:59:20] 2026-01-09 18:58:47,288 | INFO     | mean x: 1767960301.963145
[2026-01-09 13:59:20] 2026-01-09 18:58:47,288 | INFO     | mean y: 2679353.2383292383
[2026-01-09 13:59:20] 2026-01-09 18:58:47,289 | INFO     | intersect: -5131313329.2814245
[2026-01-09 13:59:20] 2026-01-09 18:58:47,290 | INFO     | chi2: 1.618001229373212
[2026-01-09 13:59:20] 2026-01-09 18:58:47,290 | INFO     | current chi2=1.618001229373212 (change=61.639134263408266 %)
[2026-01-09 13:59:20] 2026-01-09 18:58:47,291 | INFO     | sum of square deviations: 164182726931.5674
[2026-01-09 13:59:20] 2026-01-09 18:58:47,306 | INFO     | sum of deviations: 395549862980.8606
[2026-01-09 13:59:20] 2026-01-09 18:58:47,306 | INFO     | mean x: 1767960454.4709518
[2026-01-09 13:59:20] 2026-01-09 18:58:47,306 | INFO     | mean y: 2683837.674907293
[2026-01-09 13:59:20] 2026-01-09 18:58:47,307 | INFO     | intersect: -4256695505.0317426
[2026-01-09 13:59:20] 2026-01-09 18:58:47,309 | INFO     | chi2: 1.2880773707089108
[2026-01-09 13:59:20] 2026-01-09 18:58:47,309 | INFO     | current chi2=1.2880773707089108 (change=20.3908286764472 %)
[2026-01-09 13:59:20] 2026-01-09 18:58:47,309 | INFO     | left removable region: 20
[2026-01-09 13:59:20] 2026-01-09 18:58:47,311 | INFO     | sum of square deviations: 154633369655.81815
[2026-01-09 13:59:20] 2026-01-09 18:58:47,329 | INFO     | sum of deviations: 348337003194.59015
[2026-01-09 13:59:20] 2026-01-09 18:58:47,329 | INFO     | mean x: 1767960576.476671
[2026-01-09 13:59:20] 2026-01-09 18:58:47,330 | INFO     | mean y: 2691770.950819672
[2026-01-09 13:59:20] 2026-01-09 18:58:47,330 | INFO     | intersect: -3979929123.535341
[2026-01-09 13:59:20] 2026-01-09 18:58:47,331 | INFO     | chi2: 0.2969819417754191
[2026-01-09 13:59:20] 2026-01-09 18:58:47,332 | INFO     | current memory leak: 2.25 B/s (using 793 data points, chi2=0.30)
[2026-01-09 13:59:20] 2026-01-09 18:58:47,333 | INFO     | could have reported an average CPU frequency of 2599 MHz (31 samples)
[2026-01-09 13:59:20] 2026-01-09 18:58:47,333 | INFO     | ..............................
[2026-01-09 13:59:20] 2026-01-09 18:58:47,334 | INFO     | . Timing measurements:
[2026-01-09 13:59:20] 2026-01-09 18:58:47,334 | INFO     | . get job = 0 s
[2026-01-09 13:59:20] 2026-01-09 18:58:47,334 | INFO     | . initial setup = 8 s
[2026-01-09 13:59:20] 2026-01-09 18:58:47,334 | INFO     | . payload setup = 44 s
[2026-01-09 13:59:20] 2026-01-09 18:58:47,334 | INFO     | . stage-in = 0 s
[2026-01-09 13:59:20] 2026-01-09 18:58:47,334 | INFO     | . payload execution = 49943 s
[2026-01-09 13:59:20] 2026-01-09 18:58:47,335 | INFO     | . stage-out = 2 s
[2026-01-09 13:59:20] 2026-01-09 18:58:47,335 | INFO     | . log creation = 0 s
[2026-01-09 13:59:20] 2026-01-09 18:58:47,335 | INFO     | ..............................
[2026-01-09 13:59:20] 2026-01-09 18:58:47,545 | INFO     | 
[2026-01-09 13:59:20] 2026-01-09 18:58:47,545 | INFO     | job summary report
[2026-01-09 13:59:20] 2026-01-09 18:58:47,545 | INFO     | --------------------------------------------------
[2026-01-09 13:59:20] 2026-01-09 18:58:47,546 | INFO     | PanDA job id: 6963152175
[2026-01-09 13:59:20] 2026-01-09 18:58:47,546 | INFO     | task id: 47898826
[2026-01-09 13:59:20] 2026-01-09 18:58:47,546 | INFO     | errors: (none)
[2026-01-09 13:59:20] 2026-01-09 18:58:47,546 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 13:59:20] 2026-01-09 18:58:47,546 | INFO     | pilot state: finished 
[2026-01-09 13:59:20] 2026-01-09 18:58:47,546 | INFO     | transexitcode: 0
[2026-01-09 13:59:20] 2026-01-09 18:58:47,547 | INFO     | exeerrorcode: 0
[2026-01-09 13:59:20] 2026-01-09 18:58:47,547 | INFO     | exeerrordiag: 
[2026-01-09 13:59:20] 2026-01-09 18:58:47,547 | INFO     | exitcode: 0
[2026-01-09 13:59:20] 2026-01-09 18:58:47,547 | INFO     | exitmsg: OK
[2026-01-09 13:59:20] 2026-01-09 18:58:47,547 | INFO     | cpuconsumptiontime: 68882 s
[2026-01-09 13:59:20] 2026-01-09 18:58:47,547 | INFO     | nevents: 400
[2026-01-09 13:59:20] 2026-01-09 18:58:47,548 | INFO     | neventsw: 0
[2026-01-09 13:59:20] 2026-01-09 18:58:47,548 | INFO     | pid: 2719367
[2026-01-09 13:59:20] 2026-01-09 18:58:47,548 | INFO     | pgrp: 2719367
[2026-01-09 13:59:20] 2026-01-09 18:58:47,548 | INFO     | corecount: 12
[2026-01-09 13:59:20] 2026-01-09 18:58:47,548 | INFO     | event service: False
[2026-01-09 13:59:20] 2026-01-09 18:58:47,549 | INFO     | sizes: {0: 2283799, 1: 2283998, 2: 2284026, 13: 2284026, 24: 2284082, 29: 2284372, 35: 2284528, 49991: 2331429, 49992: 2331428, 49994: 2340482, 49995: 2340538, 499
[2026-01-09 13:59:20] 2026-01-09 18:58:47,549 | INFO     | --------------------------------------------------
[2026-01-09 13:59:20] 2026-01-09 18:58:47,549 | INFO     | 
[2026-01-09 13:59:20] 2026-01-09 18:58:47,549 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-01-09 13:59:20] 2026-01-09 18:58:47,568 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 13:59:20] 2026-01-09 18:58:47,569 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 13:59:20] 2026-01-09 18:58:47,569 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 13:59:20] 2026-01-09 18:58:47,569 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 13:59:20] 2026-01-09 18:58:47,570 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 13:59:20] 2026-01-09 18:58:47,570 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 13:59:20] 2026-01-09 18:58:47,570 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 13:59:20] 2026-01-09 18:58:47,570 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 13:59:20] 2026-01-09 18:58:47,570 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 13:59:20] 2026-01-09 18:58:47,570 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 13:59:20] 2026-01-09 18:58:47,571 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 13:59:20] 2026-01-09 18:58:47,571 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 13:59:20] 2026-01-09 18:58:47,571 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 13:59:20] 2026-01-09 18:58:47,571 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 13:59:20] 2026-01-09 18:58:47,571 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 13:59:20] 2026-01-09 18:58:47,571 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 13:59:20] 2026-01-09 18:58:47,571 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 13:59:20] 2026-01-09 18:58:47,572 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 13:59:20] 2026-01-09 18:58:47,572 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 13:59:20] 2026-01-09 18:58:47,572 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 13:59:20] 2026-01-09 18:58:47,572 | INFO     | job 6963152175 has completed (purged errors)
[2026-01-09 13:59:20] 2026-01-09 18:58:47,573 | INFO     | overall cleanup function is called
[2026-01-09 13:59:20] 2026-01-09 18:58:47,814 | INFO     | number of running child processes to parent process 2719367: 1
[2026-01-09 13:59:20] 2026-01-09 18:58:47,814 | INFO     | maximum number of monitored processes: 6
[2026-01-09 13:59:20] 2026-01-09 18:58:47,814 | INFO     | aborting job monitoring since job object (job id=6963152175) has expired
[2026-01-09 13:59:20] 2026-01-09 18:58:47,986 | INFO     | PID=2710780 has CPU usage=13.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-01-09 13:59:20] 2026-01-09 18:58:47,986 | INFO     | .. there are 7 such processes running
[2026-01-09 13:59:20] 2026-01-09 18:58:48,589 | INFO     | --- collectZombieJob: --- 10, [2719367]
[2026-01-09 13:59:20] 2026-01-09 18:58:48,589 | INFO     | zombie collector waiting for pid 2719367
[2026-01-09 13:59:20] 2026-01-09 18:58:48,589 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 13:59:20] 2026-01-09 18:58:48,589 | INFO     | collected zombie processes
[2026-01-09 13:59:20] 2026-01-09 18:58:48,589 | INFO     | will attempt to kill all subprocesses of pid=2719367
[2026-01-09 13:59:20] 2026-01-09 18:58:48,797 | INFO     | process IDs to be killed: [2719367] (in reverse order)
[2026-01-09 13:59:20] 2026-01-09 18:58:48,863 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 13:59:20] 2026-01-09 18:58:48,864 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 13:59:20] 2026-01-09 18:58:48,871 | INFO     | did not find any defunct processes belonging to 2719367
[2026-01-09 13:59:20] 2026-01-09 18:58:48,878 | INFO     | did not find any defunct processes belonging to 2719367
[2026-01-09 13:59:20] 2026-01-09 18:58:48,878 | INFO     | ready for new job
[2026-01-09 13:59:20] 2026-01-09 18:58:48,878 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 13:59:20] 2026-01-09 18:58:48,882 | INFO     | ***************************************
[2026-01-09 13:59:20] 2026-01-09 18:58:48,882 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 13:59:20] 2026-01-09 18:58:48,882 | INFO     | ***************************************
[2026-01-09 13:59:20] 2026-01-09 18:58:48,882 | INFO     | 
[2026-01-09 13:59:20] 2026-01-09 18:58:48,884 | INFO     | architecture information:
[2026-01-09 13:59:20] 2026-01-09 18:58:48,884 | INFO     | executing command: cat /etc/os-release
[2026-01-09 13:59:20] 2026-01-09 18:58:48,897 | INFO     | cat /etc/os-release:
[2026-01-09 13:59:20] NAME="CentOS Linux"
[2026-01-09 13:59:20] VERSION="7 (Core)"
[2026-01-09 13:59:20] ID="centos"
[2026-01-09 13:59:20] ID_LIKE="rhel fedora"
[2026-01-09 13:59:20] VERSION_ID="7"
[2026-01-09 13:59:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 13:59:20] ANSI_COLOR="0;31"
[2026-01-09 13:59:20] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 13:59:20] HOME_URL="https://www.centos.org/"
[2026-01-09 13:59:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 13:59:20] 
[2026-01-09 13:59:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 13:59:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 13:59:20] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 13:59:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 13:59:20] 
[2026-01-09 13:59:20] 2026-01-09 18:58:48,898 | INFO     | ***************************************
[2026-01-09 13:59:20] 2026-01-09 18:58:49,400 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-01-09 13:59:20] 2026-01-09 18:58:49,418 | INFO     | sufficient remaining disk space (53312749568 B)
[2026-01-09 13:59:20] 2026-01-09 18:58:49,418 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 13:59:20] 2026-01-09 18:58:49,419 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 13:59:20] 2026-01-09 18:58:49,419 | INFO     | update_server=False
[2026-01-09 13:59:20] 2026-01-09 18:58:49,419 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 13:59:20] 2026-01-09 18:58:49,419 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 13:59:20] 2026-01-09 18:58:49,420 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 13:59:20] 2026-01-09 18:58:49,420 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 13:59:20] 2026-01-09 18:58:49,420 | INFO     | aborting loop
[2026-01-09 13:59:20] 2026-01-09 18:58:49,846 | INFO     | all data control threads have been joined
[2026-01-09 13:59:20] 2026-01-09 18:58:50,348 | INFO     | all job control threads have been joined
[2026-01-09 13:59:20] 2026-01-09 18:58:50,424 | INFO     | [job] retrieve thread has finished
[2026-01-09 13:59:20] 2026-01-09 18:58:50,425 | INFO     | [job] queue monitor thread has finished
[2026-01-09 13:59:20] 2026-01-09 18:58:50,425 | INFO     | [job] job monitor thread has finished
[2026-01-09 13:59:20] 2026-01-09 18:58:50,586 | INFO     | all payload control threads have been joined
[2026-01-09 13:59:20] 2026-01-09 18:58:50,790 | INFO     | [payload] failed_post thread has finished
[2026-01-09 13:59:20] 2026-01-09 18:58:50,794 | INFO     | [data] copytool_in thread has finished
[2026-01-09 13:59:20] 2026-01-09 18:58:50,851 | INFO     | [data] control thread has finished
[2026-01-09 13:59:20] 2026-01-09 18:58:50,864 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 13:59:20] 2026-01-09 18:58:51,058 | INFO     | [job] validate thread has finished
[2026-01-09 13:59:20] 2026-01-09 18:58:51,132 | INFO     | [payload] validate_post thread has finished
[2026-01-09 13:59:20] 2026-01-09 18:58:51,354 | INFO     | [job] control thread has finished
[2026-01-09 13:59:20] 2026-01-09 18:58:51,383 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 13:59:20] 2026-01-09 18:58:51,413 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 13:59:20] 2026-01-09 18:58:51,495 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 13:59:20] 2026-01-09 18:58:51,559 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 13:59:20] 2026-01-09 18:58:51,591 | INFO     | [payload] control thread has finished
[2026-01-09 13:59:20] 2026-01-09 18:58:52,876 | INFO     | [data] copytool_out thread has finished
[2026-01-09 13:59:20] 2026-01-09 18:58:53,426 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 13:59:20] 2026-01-09 18:59:04,448 | INFO     | [monitor] cgroup control has ended
[2026-01-09 13:59:20] 2026-01-09 18:59:05,327 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139974300374848)>', '<ExcThread(monitor, started 139973957236480)>']
[2026-01-09 13:59:20] 2026-01-09 18:59:10,352 | INFO     | all workflow threads have been joined
[2026-01-09 13:59:20] 2026-01-09 18:59:10,352 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 13:59:20] 2026-01-09 18:59:10,352 | INFO     | traces error code: 0
[2026-01-09 13:59:20] 2026-01-09 18:59:10,352 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 13:59:20] 2026-01-09 18:59:20,355 | INFO     | PID=2710780 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 13:59:20] 2026-01-09 18:59:20,356 | INFO     | .. there are 7 such processes running
[2026-01-09 13:59:20] 2026-01-09 18:59:20,356 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 13:59:20] 2026-01-09 18:59:20,357 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 13:59:20] 2026-01-09 18:59:20,357 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 13:59:20] 2026-01-09 18:59:20,357 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 13:59:20] 2026-01-09 18:59:20,357 | INFO     | [monitor] control thread has ended
[2026-01-09 13:59:20] 2026-01-09 18:59:20,496 [wrapper] ==== pilot stdout END ====
[2026-01-09 13:59:20] 2026-01-09 18:59:20,500 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 13:59:20] 2026-01-09 18:59:20,503 [wrapper] pilotpid: 2710780
[2026-01-09 13:59:20] 2026-01-09 18:59:20,506 [wrapper] Pilot exit status: 0
[2026-01-09 13:59:20] 2026-01-09 18:59:20,518 [wrapper] pandaids: 6963152175
[2026-01-09 13:59:20] 2026-01-09 18:59:20,571 [wrapper] cleanup supervisor_pilot 3928810 2710782
[2026-01-09 13:59:20] 2026-01-09 18:59:20,575 [wrapper] Test setup, not cleaning
[2026-01-09 13:59:20] 2026-01-09 18:59:20,578 [wrapper] apfmon messages muted
[2026-01-09 13:59:20] 2026-01-09 18:59:20,581 [wrapper] ==== wrapper stdout END ====
[2026-01-09 13:59:20] 2026-01-09 18:59:20,584 [wrapper] ==== wrapper stderr END ====
[2026-01-09 13:59:20]  *** Error codes and diagnostics ***
[2026-01-09 13:59:20]     "exeErrorCode": 0,
[2026-01-09 13:59:20]     "exeErrorDiag": "",
[2026-01-09 13:59:20]     "pilotErrorCode": 0,
[2026-01-09 13:59:20]     "pilotErrorDiag": "",
[2026-01-09 13:59:20]  *** Listing of results directory ***
[2026-01-09 13:59:20] total 451444
[2026-01-09 13:59:20] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 11:02 pilot3.tar.gz
[2026-01-09 13:59:20] -rwx------. 1 boincer umatlas     36322 Jan  8 11:03 runpilot2-wrapper.sh
[2026-01-09 13:59:20] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 11:04 queuedata.json
[2026-01-09 13:59:20] -rw-r--r--. 1 boincer umatlas       100 Jan  9 00:02 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 13:59:20] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 00:02 run_atlas
[2026-01-09 13:59:20] -rw-r--r--. 1 boincer umatlas       105 Jan  9 00:02 job.xml
[2026-01-09 13:59:20] -rw-r--r--. 2 boincer umatlas 224053182 Jan  9 00:02 EVNT.47898824._001135.pool.root.1
[2026-01-09 13:59:20] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 00:02 start_atlas.sh
[2026-01-09 13:59:20] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 00:02 shared
[2026-01-09 13:59:20] -rw-r--r--. 2 boincer umatlas    592397 Jan  9 00:02 input.tar.gz
[2026-01-09 13:59:20] -rw-r--r--. 1 boincer umatlas         0 Jan  9 00:02 boinc_lockfile
[2026-01-09 13:59:20] -rw-r--r--. 1 boincer umatlas      2519 Jan  9 00:03 pandaJob.out
[2026-01-09 13:59:20] -rw-------. 1 boincer umatlas        57 Jan  9 00:03 setup.sh.local
[2026-01-09 13:59:20] -rw-------. 1 boincer umatlas    989771 Jan  9 00:04 agis_schedconf.cvmfs.json
[2026-01-09 13:59:20] drwx------. 5 boincer umatlas      4096 Jan  9 00:04 pilot3
[2026-01-09 13:59:20] -rw-r--r--. 1 boincer umatlas      6657 Jan  9 13:54 init_data.xml
[2026-01-09 13:59:20] -rw-------. 1 boincer umatlas 220501447 Jan  9 13:58 HITS.47898826._028976.pool.root.1
[2026-01-09 13:59:20] -rw-r--r--. 1 boincer umatlas       531 Jan  9 13:58 boinc_task_state.xml
[2026-01-09 13:59:20] -rw-------. 1 boincer umatlas      1040 Jan  9 13:58 memory_monitor_summary.json
[2026-01-09 13:59:20] -rw-------. 1 boincer umatlas   1516240 Jan  9 13:58 agis_ddmendpoints.agis.ALL.json
[2026-01-09 13:59:20] -rw-------. 1 boincer umatlas    939141 Jan  9 13:58 log.47898826._028976.job.log.tgz.1
[2026-01-09 13:59:20] -rw-------. 1 boincer umatlas      7822 Jan  9 13:58 heartbeat.json
[2026-01-09 13:59:20] -rw-r--r--. 1 boincer umatlas      8192 Jan  9 13:59 boinc_mmap_file
[2026-01-09 13:59:20] -rw-r--r--. 1 boincer umatlas        28 Jan  9 13:59 wrapper_checkpoint.txt
[2026-01-09 13:59:20] -rw-------. 1 boincer umatlas        95 Jan  9 13:59 pilot_heartbeat.json
[2026-01-09 13:59:20] -rw-------. 1 boincer umatlas       822 Jan  9 13:59 pilotlog.txt
[2026-01-09 13:59:20] -rw-------. 1 boincer umatlas   5966910 Jan  9 13:59 log.47898826._028976.job.log.1
[2026-01-09 13:59:20] -rw-------. 1 boincer umatlas       357 Jan  9 13:59 output.list
[2026-01-09 13:59:20] -rw-r--r--. 1 boincer umatlas       620 Jan  9 13:59 runtime_log
[2026-01-09 13:59:20] -rw-------. 1 boincer umatlas   6922240 Jan  9 13:59 result.tar.gz
[2026-01-09 13:59:20] -rw-r--r--. 1 boincer umatlas      9340 Jan  9 13:59 runtime_log.err
[2026-01-09 13:59:20] -rw-------. 1 boincer umatlas       657 Jan  9 13:59 KfSNDmTf7x8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmNjfKDmIRi80n.diag
[2026-01-09 13:59:20] -rw-r--r--. 1 boincer umatlas     21715 Jan  9 13:59 stderr.txt
[2026-01-09 13:59:20] HITS file was successfully produced:
[2026-01-09 13:59:20] -rw-------. 1 boincer umatlas 220501447 Jan  9 13:58 shared/HITS.pool.root.1
[2026-01-09 13:59:20]  *** Contents of shared directory: ***
[2026-01-09 13:59:20] total 441504
[2026-01-09 13:59:20] -rw-r--r--. 2 boincer umatlas 224053182 Jan  9 00:02 ATLAS.root_0
[2026-01-09 13:59:20] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 00:02 start_atlas.sh
[2026-01-09 13:59:20] -rw-r--r--. 2 boincer umatlas    592397 Jan  9 00:02 input.tar.gz
[2026-01-09 13:59:20] -rw-------. 1 boincer umatlas 220501447 Jan  9 13:58 HITS.pool.root.1
[2026-01-09 13:59:20] -rw-------. 1 boincer umatlas   6922240 Jan  9 13:59 result.tar.gz
13:59:22 (2706380): run_atlas exited; CPU time 69999.782636
13:59:22 (2706380): called boinc_finish(0)

</stderr_txt>
]]>

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