Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:02:53 (3439725): wrapper (7.7.26015): starting
00:02:53 (3439725): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 00:02:53] Arguments: --nthreads 8
[2026-01-09 00:02:53] Threads: 8
[2026-01-09 00:02:53] Checking for CVMFS
[2026-01-09 00:02:53] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 00:02:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 00:02:54] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 00:02:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 00:02:55] 2.13.3.0 8207 20632 186708 154931 0 369 39864227 40960001 7544 16776704 0 10795866 99.704 9309875 33646 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-09 00:02:55] CVMFS is ok
[2026-01-09 00:02:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 00:02:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 00:02:55] Further information can be found at the LHC@home message board.
[2026-01-09 00:02:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 00:02:55] Checking for apptainer binary...
[2026-01-09 00:02:55] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 00:02:55] Running /usr/bin/apptainer --version
[2026-01-09 00:02:55] apptainer version 1.4.5-2.el9
[2026-01-09 00:02:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 00:02:56] c-211-11.aglt2.org
[2026-01-09 00:02:56] apptainer works
[2026-01-09 00:02:56] Set ATHENA_PROC_NUMBER=8
[2026-01-09 00:02:56] Set ATHENA_CORE_NUMBER=8
[2026-01-09 00:02:56] Starting ATLAS job with PandaID=6963148394
[2026-01-09 00:02:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 22:09:17]  *** The last 200 lines of the pilot log: ***
[2026-01-09 22:09:17] 2026-01-10 03:08:09,315 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 22:09:17] 2026-01-10 03:08:09,407 | INFO     | found 24 cores (12 cores per socket, 2 sockets) HT, CPU MHz: 2588.4013958333335
[2026-01-09 22:09:17] 2026-01-10 03:08:09,426 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6963148394/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 22:09:17] 2026-01-10 03:08:09,427 | INFO     | extracted standard info from prmon json
[2026-01-09 22:09:17] 2026-01-10 03:08:09,427 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 22:09:17] 2026-01-10 03:08:09,427 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 22:09:17] 2026-01-10 03:08:09,432 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 22:09:17] 2026-01-10 03:08:09,432 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 22:09:17] 2026-01-10 03:08:09,482 | INFO     | fitting pss+swap vs Time
[2026-01-09 22:09:17] 2026-01-10 03:08:09,488 | INFO     | sum of square deviations: 679674971345.7965
[2026-01-09 22:09:17] 2026-01-10 03:08:09,577 | INFO     | sum of deviations: 948316710339.1111
[2026-01-09 22:09:17] 2026-01-10 03:08:09,578 | INFO     | mean x: 1767974807.8752887
[2026-01-09 22:09:17] 2026-01-10 03:08:09,578 | INFO     | mean y: 2493118.3710546573
[2026-01-09 22:09:17] 2026-01-10 03:08:09,578 | INFO     | intersect: -2464274269.645233
[2026-01-09 22:09:17] 2026-01-10 03:08:09,580 | INFO     | chi2: 4.997357934296515
[2026-01-09 22:09:17] 2026-01-10 03:08:09,585 | INFO     | sum of square deviations: 671856808773.9641
[2026-01-09 22:09:17] 2026-01-10 03:08:09,674 | INFO     | sum of deviations: 1108059338206.1338
[2026-01-09 22:09:17] 2026-01-10 03:08:09,675 | INFO     | mean x: 1767974655.3771253
[2026-01-09 22:09:17] 2026-01-10 03:08:09,679 | INFO     | mean y: 2496226.815301391
[2026-01-09 22:09:17] 2026-01-10 03:08:09,679 | INFO     | intersect: -2913334648.1851444
[2026-01-09 22:09:17] 2026-01-10 03:08:09,681 | INFO     | chi2: 3.6188202156297953
[2026-01-09 22:09:17] 2026-01-10 03:08:09,682 | INFO     | current chi2=3.6188202156297953 (change=27.585330824632603 %)
[2026-01-09 22:09:17] 2026-01-10 03:08:09,683 | INFO     | sum of square deviations: 664098596211.3867
[2026-01-09 22:09:17] 2026-01-10 03:08:09,773 | INFO     | sum of deviations: 1102637703023.7346
[2026-01-09 22:09:17] 2026-01-10 03:08:09,774 | INFO     | mean x: 1767974502.8766487
[2026-01-09 22:09:17] 2026-01-10 03:08:09,778 | INFO     | mean y: 2496120.2435996896
[2026-01-09 22:09:17] 2026-01-10 03:08:09,778 | INFO     | intersect: -2932964601.971087
[2026-01-09 22:09:17] 2026-01-10 03:08:09,780 | INFO     | chi2: 3.618475015030043
[2026-01-09 22:09:17] 2026-01-10 03:08:09,781 | INFO     | current chi2=3.618475015030043 (change=0.009539037011599812 %)
[2026-01-09 22:09:17] 2026-01-10 03:08:09,781 | INFO     | right removable region: 1288
[2026-01-09 22:09:17] 2026-01-10 03:08:09,786 | INFO     | sum of square deviations: 671856273314.4524
[2026-01-09 22:09:17] 2026-01-10 03:08:09,877 | INFO     | sum of deviations: 570415204576.9789
[2026-01-09 22:09:17] 2026-01-10 03:08:09,877 | INFO     | mean x: 1767974960.3786707
[2026-01-09 22:09:17] 2026-01-10 03:08:09,877 | INFO     | mean y: 2500486.057187017
[2026-01-09 22:09:17] 2026-01-10 03:08:09,877 | INFO     | intersect: -1498534539.9853122
[2026-01-09 22:09:17] 2026-01-10 03:08:09,908 | INFO     | chi2: 1.9446970395718957
[2026-01-09 22:09:17] 2026-01-10 03:08:09,908 | INFO     | current chi2=1.9446970395718957 (change=61.085496273429264 %)
[2026-01-09 22:09:17] 2026-01-10 03:08:09,930 | INFO     | sum of square deviations: 664098077953.1211
[2026-01-09 22:09:17] 2026-01-10 03:08:10,048 | INFO     | sum of deviations: 432973754606.9686
[2026-01-09 22:09:17] 2026-01-10 03:08:10,049 | INFO     | mean x: 1767975112.8789759
[2026-01-09 22:09:17] 2026-01-10 03:08:10,049 | INFO     | mean y: 2503187.0062063616
[2026-01-09 22:09:17] 2026-01-10 03:08:10,049 | INFO     | intersect: -1150168154.9050186
[2026-01-09 22:09:17] 2026-01-10 03:08:10,051 | INFO     | chi2: 1.5767202341444935
[2026-01-09 22:09:17] 2026-01-10 03:08:10,055 | INFO     | current chi2=1.5767202341444935 (change=18.92206333118131 %)
[2026-01-09 22:09:17] 2026-01-10 03:08:10,055 | INFO     | left removable region: 20
[2026-01-09 22:09:17] 2026-01-10 03:08:10,057 | INFO     | sum of square deviations: 632165619521.7251
[2026-01-09 22:09:17] 2026-01-10 03:08:10,143 | INFO     | sum of deviations: 461533473051.39557
[2026-01-09 22:09:17] 2026-01-10 03:08:10,147 | INFO     | mean x: 1767975082.3832808
[2026-01-09 22:09:17] 2026-01-10 03:08:10,147 | INFO     | mean y: 2508860.1884858045
[2026-01-09 22:09:17] 2026-01-10 03:08:10,147 | INFO     | intersect: -1288259974.5007925
[2026-01-09 22:09:17] 2026-01-10 03:08:10,149 | INFO     | chi2: 0.012337803153839795
[2026-01-09 22:09:17] 2026-01-10 03:08:10,150 | INFO     | current memory leak: 0.73 B/s (using 1268 data points, chi2=0.01)
[2026-01-09 22:09:17] 2026-01-10 03:08:10,155 | INFO     | could have reported an average CPU frequency of 2609 MHz (46 samples)
[2026-01-09 22:09:17] 2026-01-10 03:08:10,155 | INFO     | ..............................
[2026-01-09 22:09:17] 2026-01-10 03:08:10,155 | INFO     | . Timing measurements:
[2026-01-09 22:09:17] 2026-01-10 03:08:10,156 | INFO     | . get job = 0 s
[2026-01-09 22:09:17] 2026-01-10 03:08:10,156 | INFO     | . initial setup = 5 s
[2026-01-09 22:09:17] 2026-01-10 03:08:10,156 | INFO     | . payload setup = 40 s
[2026-01-09 22:09:17] 2026-01-10 03:08:10,156 | INFO     | . stage-in = 0 s
[2026-01-09 22:09:17] 2026-01-10 03:08:10,156 | INFO     | . payload execution = 79255 s
[2026-01-09 22:09:17] 2026-01-10 03:08:10,156 | INFO     | . stage-out = 9 s
[2026-01-09 22:09:17] 2026-01-10 03:08:10,156 | INFO     | . log creation = 3 s
[2026-01-09 22:09:17] 2026-01-10 03:08:10,156 | INFO     | ..............................
[2026-01-09 22:09:17] 2026-01-10 03:08:10,301 | INFO     | 
[2026-01-09 22:09:17] 2026-01-10 03:08:10,301 | INFO     | job summary report
[2026-01-09 22:09:17] 2026-01-10 03:08:10,301 | INFO     | --------------------------------------------------
[2026-01-09 22:09:17] 2026-01-10 03:08:10,301 | INFO     | PanDA job id: 6963148394
[2026-01-09 22:09:17] 2026-01-10 03:08:10,301 | INFO     | task id: 47898826
[2026-01-09 22:09:17] 2026-01-10 03:08:10,302 | INFO     | errors: (none)
[2026-01-09 22:09:17] 2026-01-10 03:08:10,302 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 22:09:17] 2026-01-10 03:08:10,302 | INFO     | pilot state: finished 
[2026-01-09 22:09:17] 2026-01-10 03:08:10,302 | INFO     | transexitcode: 0
[2026-01-09 22:09:17] 2026-01-10 03:08:10,302 | INFO     | exeerrorcode: 0
[2026-01-09 22:09:17] 2026-01-10 03:08:10,302 | INFO     | exeerrordiag: 
[2026-01-09 22:09:17] 2026-01-10 03:08:10,302 | INFO     | exitcode: 0
[2026-01-09 22:09:17] 2026-01-10 03:08:10,303 | INFO     | exitmsg: OK
[2026-01-09 22:09:17] 2026-01-10 03:08:10,303 | INFO     | cpuconsumptiontime: 75002 s
[2026-01-09 22:09:17] 2026-01-10 03:08:10,303 | INFO     | nevents: 400
[2026-01-09 22:09:17] 2026-01-10 03:08:10,303 | INFO     | neventsw: 0
[2026-01-09 22:09:17] 2026-01-10 03:08:10,303 | INFO     | pid: 3494069
[2026-01-09 22:09:17] 2026-01-10 03:08:10,303 | INFO     | pgrp: 3494069
[2026-01-09 22:09:17] 2026-01-10 03:08:10,303 | INFO     | corecount: 8
[2026-01-09 22:09:17] 2026-01-10 03:08:10,303 | INFO     | event service: False
[2026-01-09 22:09:17] 2026-01-10 03:08:10,304 | INFO     | sizes: {0: 2283800, 1: 2283999, 12: 2283999, 24: 2284027, 34: 2284317, 35: 2284345, 46: 2284501, 79302: 2343617, 79303: 2343616, 79314: 2352670, 79317: 2352726, 79
[2026-01-09 22:09:17] 2026-01-10 03:08:10,304 | INFO     | --------------------------------------------------
[2026-01-09 22:09:17] 2026-01-10 03:08:10,304 | INFO     | 
[2026-01-09 22:09:17] 2026-01-10 03:08:10,304 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-01-09 22:09:17] 2026-01-10 03:08:10,328 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 22:09:17] 2026-01-10 03:08:10,329 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 22:09:17] 2026-01-10 03:08:10,329 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 22:09:17] 2026-01-10 03:08:10,329 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 22:09:17] 2026-01-10 03:08:10,329 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 22:09:17] 2026-01-10 03:08:10,329 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 22:09:17] 2026-01-10 03:08:10,329 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 22:09:17] 2026-01-10 03:08:10,330 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 22:09:17] 2026-01-10 03:08:10,330 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 22:09:17] 2026-01-10 03:08:10,330 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 22:09:17] 2026-01-10 03:08:10,330 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 22:09:17] 2026-01-10 03:08:10,330 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 22:09:17] 2026-01-10 03:08:10,330 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 22:09:17] 2026-01-10 03:08:10,330 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 22:09:17] 2026-01-10 03:08:10,331 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 22:09:17] 2026-01-10 03:08:10,331 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 22:09:17] 2026-01-10 03:08:10,331 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 22:09:17] 2026-01-10 03:08:10,331 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 22:09:17] 2026-01-10 03:08:10,331 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 22:09:17] 2026-01-10 03:08:10,331 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 22:09:17] 2026-01-10 03:08:10,331 | INFO     | job 6963148394 has completed (purged errors)
[2026-01-09 22:09:17] 2026-01-10 03:08:10,332 | INFO     | overall cleanup function is called
[2026-01-09 22:09:17] 2026-01-10 03:08:11,341 | INFO     | --- collectZombieJob: --- 10, [3494069]
[2026-01-09 22:09:17] 2026-01-10 03:08:11,341 | INFO     | zombie collector waiting for pid 3494069
[2026-01-09 22:09:17] 2026-01-10 03:08:11,341 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 22:09:17] 2026-01-10 03:08:11,342 | INFO     | collected zombie processes
[2026-01-09 22:09:17] 2026-01-10 03:08:11,342 | INFO     | will attempt to kill all subprocesses of pid=3494069
[2026-01-09 22:09:17] 2026-01-10 03:08:12,413 | INFO     | process IDs to be killed: [3494069] (in reverse order)
[2026-01-09 22:09:17] 2026-01-10 03:08:12,699 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 22:09:17] 2026-01-10 03:08:12,700 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 22:09:17] 2026-01-10 03:08:12,719 | INFO     | did not find any defunct processes belonging to 3494069
[2026-01-09 22:09:17] 2026-01-10 03:08:12,736 | INFO     | did not find any defunct processes belonging to 3494069
[2026-01-09 22:09:17] 2026-01-10 03:08:12,736 | INFO     | ready for new job
[2026-01-09 22:09:17] 2026-01-10 03:08:12,736 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 22:09:17] 2026-01-10 03:08:12,748 | INFO     | ***************************************
[2026-01-09 22:09:17] 2026-01-10 03:08:12,749 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 22:09:17] 2026-01-10 03:08:12,749 | INFO     | ***************************************
[2026-01-09 22:09:17] 2026-01-10 03:08:12,749 | INFO     | 
[2026-01-09 22:09:17] 2026-01-10 03:08:12,756 | INFO     | architecture information:
[2026-01-09 22:09:17] 2026-01-10 03:08:12,756 | INFO     | executing command: cat /etc/os-release
[2026-01-09 22:09:17] 2026-01-10 03:08:12,805 | INFO     | cat /etc/os-release:
[2026-01-09 22:09:17] NAME="CentOS Linux"
[2026-01-09 22:09:17] VERSION="7 (Core)"
[2026-01-09 22:09:17] ID="centos"
[2026-01-09 22:09:17] ID_LIKE="rhel fedora"
[2026-01-09 22:09:17] VERSION_ID="7"
[2026-01-09 22:09:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 22:09:17] ANSI_COLOR="0;31"
[2026-01-09 22:09:17] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 22:09:17] HOME_URL="https://www.centos.org/"
[2026-01-09 22:09:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 22:09:17] 
[2026-01-09 22:09:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 22:09:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 22:09:17] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 22:09:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 22:09:17] 
[2026-01-09 22:09:17] 2026-01-10 03:08:12,806 | INFO     | ***************************************
[2026-01-09 22:09:17] 2026-01-10 03:08:13,311 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-01-09 22:09:17] 2026-01-10 03:08:13,385 | INFO     | sufficient remaining disk space (61694017536 B)
[2026-01-09 22:09:17] 2026-01-10 03:08:13,386 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 22:09:17] 2026-01-10 03:08:13,386 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 22:09:17] 2026-01-10 03:08:13,386 | INFO     | update_server=False
[2026-01-09 22:09:17] 2026-01-10 03:08:13,386 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 22:09:17] 2026-01-10 03:08:13,386 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 22:09:17] 2026-01-10 03:08:13,466 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-09 22:09:17] 2026-01-10 03:08:13,466 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-09 22:09:17] 2026-01-10 03:08:13,466 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 22:09:17] 2026-01-10 03:08:13,467 | INFO     | will abort loop
[2026-01-09 22:09:17] 2026-01-10 03:08:14,222 | INFO     | all data control threads have been joined
[2026-01-09 22:09:17] 2026-01-10 03:08:14,305 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 22:09:17] 2026-01-10 03:08:14,392 | INFO     | [job] retrieve thread has finished
[2026-01-09 22:09:17] 2026-01-10 03:08:14,476 | INFO     | [job] job monitor thread has finished
[2026-01-09 22:09:17] 2026-01-10 03:08:14,495 | INFO     | all job control threads have been joined
[2026-01-09 22:09:17] 2026-01-10 03:08:14,636 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 22:09:17] 2026-01-10 03:08:14,637 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 22:09:17] 2026-01-10 03:08:14,637 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 22:09:17] 2026-01-10 03:08:14,637 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 22:09:17] 2026-01-10 03:08:14,638 | INFO     | [job] validate thread has finished
[2026-01-09 22:09:17] 2026-01-10 03:08:14,638 | INFO     | [data] copytool_in thread has finished
[2026-01-09 22:09:17] 2026-01-10 03:08:14,646 | INFO     | [payload] validate_post thread has finished
[2026-01-09 22:09:17] 2026-01-10 03:08:14,758 | INFO     | all payload control threads have been joined
[2026-01-09 22:09:17] 2026-01-10 03:08:15,228 | INFO     | [data] control thread has finished
[2026-01-09 22:09:17] 2026-01-10 03:08:15,334 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 22:09:17] 2026-01-10 03:08:15,503 | INFO     | [job] control thread has finished
[2026-01-09 22:09:17] 2026-01-10 03:08:15,766 | INFO     | [payload] control thread has finished
[2026-01-09 22:09:17] 2026-01-10 03:08:15,874 | INFO     | [payload] failed_post thread has finished
[2026-01-09 22:09:17] 2026-01-10 03:08:16,325 | INFO     | [data] copytool_out thread has finished
[2026-01-09 22:09:17] 2026-01-10 03:08:16,346 | INFO     | [job] queue monitor thread has finished
[2026-01-09 22:09:17] 2026-01-10 03:08:17,400 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 22:09:17] 2026-01-10 03:08:46,431 | INFO     | PID=3455017 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 22:09:17] 2026-01-10 03:08:46,431 | INFO     | .. there are 11 such processes running
[2026-01-09 22:09:17] 2026-01-10 03:08:46,432 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 22:09:17] 2026-01-10 03:08:46,432 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 22:09:17] 2026-01-10 03:08:46,432 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 22:09:17] 2026-01-10 03:08:48,534 | INFO     | [monitor] cgroup control has ended
[2026-01-09 22:09:17] 2026-01-10 03:08:50,141 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140617139898176)>', '<ExcThread(monitor, started 140616642041600)>']
[2026-01-09 22:09:17] 2026-01-10 03:08:50,467 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 22:09:17] 2026-01-10 03:08:50,467 | INFO     | [monitor] control thread has ended
[2026-01-09 22:09:17] 2026-01-10 03:08:55,167 | INFO     | all workflow threads have been joined
[2026-01-09 22:09:17] 2026-01-10 03:08:55,167 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 22:09:17] 2026-01-10 03:08:55,168 | INFO     | traces error code: 0
[2026-01-09 22:09:17] 2026-01-10 03:08:55,168 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 22:09:17] 2026-01-10 03:08:55,942 [wrapper] ==== pilot stdout END ====
[2026-01-09 22:09:17] 2026-01-10 03:08:55,973 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 22:09:17] 2026-01-10 03:08:56,015 [wrapper] pilotpid: 3455017
[2026-01-09 22:09:17] 2026-01-10 03:08:56,040 [wrapper] Pilot exit status: 0
[2026-01-09 22:09:17] 2026-01-10 03:08:56,169 [wrapper] pandaids: 6963148394
[2026-01-09 22:09:17] 2026-01-10 03:08:56,417 [wrapper] cleanup supervisor_pilot 1581665 3455018
[2026-01-09 22:09:17] 2026-01-10 03:08:56,443 [wrapper] Test setup, not cleaning
[2026-01-09 22:09:17] 2026-01-10 03:08:56,456 [wrapper] apfmon messages muted
[2026-01-09 22:09:17] 2026-01-10 03:08:56,485 [wrapper] ==== wrapper stdout END ====
[2026-01-09 22:09:17] 2026-01-10 03:08:56,522 [wrapper] ==== wrapper stderr END ====
[2026-01-09 22:09:17]  *** Error codes and diagnostics ***
[2026-01-09 22:09:17]     "exeErrorCode": 0,
[2026-01-09 22:09:17]     "exeErrorDiag": "",
[2026-01-09 22:09:17]     "pilotErrorCode": 0,
[2026-01-09 22:09:17]     "pilotErrorDiag": "",
[2026-01-09 22:09:17]  *** Listing of results directory ***
[2026-01-09 22:09:17] total 455408
[2026-01-09 22:09:17] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 11:02 pilot3.tar.gz
[2026-01-09 22:09:17] -rwx------. 1 boincer umatlas     36322 Jan  8 11:06 runpilot2-wrapper.sh
[2026-01-09 22:09:17] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 11:09 queuedata.json
[2026-01-09 22:09:17] -rw-r--r--. 1 boincer umatlas       100 Jan  9 00:02 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 22:09:17] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 00:02 run_atlas
[2026-01-09 22:09:17] -rw-r--r--. 1 boincer umatlas       105 Jan  9 00:02 job.xml
[2026-01-09 22:09:17] -rw-r--r--. 2 boincer umatlas 226069866 Jan  9 00:02 EVNT.47898824._001107.pool.root.1
[2026-01-09 22:09:17] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 00:02 start_atlas.sh
[2026-01-09 22:09:17] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 00:02 shared
[2026-01-09 22:09:17] -rw-r--r--. 2 boincer umatlas    592399 Jan  9 00:02 input.tar.gz
[2026-01-09 22:09:17] -rw-r--r--. 1 boincer umatlas         0 Jan  9 00:02 boinc_lockfile
[2026-01-09 22:09:17] -rw-r--r--. 1 boincer umatlas      2520 Jan  9 00:02 pandaJob.out
[2026-01-09 22:09:17] -rw-------. 1 boincer umatlas        57 Jan  9 00:02 setup.sh.local
[2026-01-09 22:09:17] -rw-------. 1 boincer umatlas    989771 Jan  9 00:04 agis_schedconf.cvmfs.json
[2026-01-09 22:09:17] drwx------. 5 boincer umatlas      4096 Jan  9 00:04 pilot3
[2026-01-09 22:09:17] -rw-r--r--. 1 boincer umatlas      6611 Jan  9 22:03 init_data.xml
[2026-01-09 22:09:17] -rw-------. 1 boincer umatlas 215541645 Jan  9 22:04 HITS.47898826._028065.pool.root.1
[2026-01-09 22:09:17] -rw-r--r--. 1 boincer umatlas       531 Jan  9 22:04 boinc_task_state.xml
[2026-01-09 22:09:17] -rw-------. 1 boincer umatlas      1040 Jan  9 22:07 memory_monitor_summary.json
[2026-01-09 22:09:17] -rw-------. 1 boincer umatlas   1516240 Jan  9 22:07 agis_ddmendpoints.agis.ALL.json
[2026-01-09 22:09:17] -rw-------. 1 boincer umatlas   1239357 Jan  9 22:07 log.47898826._028065.job.log.tgz.1
[2026-01-09 22:09:17] -rw-------. 1 boincer umatlas      7827 Jan  9 22:08 heartbeat.json
[2026-01-09 22:09:17] -rw-------. 1 boincer umatlas        95 Jan  9 22:08 pilot_heartbeat.json
[2026-01-09 22:09:17] -rw-------. 1 boincer umatlas      5010 Jan  9 22:08 pilotlog.txt
[2026-01-09 22:09:17] -rw-------. 1 boincer umatlas   9170778 Jan  9 22:08 log.47898826._028065.job.log.1
[2026-01-09 22:09:17] -rw-------. 1 boincer umatlas       357 Jan  9 22:08 output.list
[2026-01-09 22:09:17] -rw-r--r--. 1 boincer umatlas      8192 Jan  9 22:08 boinc_mmap_file
[2026-01-09 22:09:17] -rw-r--r--. 1 boincer umatlas        28 Jan  9 22:08 wrapper_checkpoint.txt
[2026-01-09 22:09:17] -rw-r--r--. 1 boincer umatlas       620 Jan  9 22:08 runtime_log
[2026-01-09 22:09:17] -rw-------. 1 boincer umatlas  10424320 Jan  9 22:08 result.tar.gz
[2026-01-09 22:09:17] -rw-------. 1 boincer umatlas       658 Jan  9 22:08 SzDLDmAi7x8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmzpfKDmCgRhom.diag
[2026-01-09 22:09:17] -rw-r--r--. 1 boincer umatlas      9343 Jan  9 22:08 runtime_log.err
[2026-01-09 22:09:17] -rw-r--r--. 1 boincer umatlas     21221 Jan  9 22:09 stderr.txt
[2026-01-09 22:09:17] HITS file was successfully produced:
[2026-01-09 22:09:17] -rw-------. 1 boincer umatlas 215541645 Jan  9 22:04 shared/HITS.pool.root.1
[2026-01-09 22:09:17]  *** Contents of shared directory: ***
[2026-01-09 22:09:17] total 442044
[2026-01-09 22:09:17] -rw-r--r--. 2 boincer umatlas 226069866 Jan  9 00:02 ATLAS.root_0
[2026-01-09 22:09:17] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 00:02 start_atlas.sh
[2026-01-09 22:09:17] -rw-r--r--. 2 boincer umatlas    592399 Jan  9 00:02 input.tar.gz
[2026-01-09 22:09:17] -rw-------. 1 boincer umatlas 215541645 Jan  9 22:04 HITS.pool.root.1
[2026-01-09 22:09:17] -rw-------. 1 boincer umatlas  10424320 Jan  9 22:08 result.tar.gz
22:09:19 (3439725): run_atlas exited; CPU time 77667.997690
22:09:19 (3439725): called boinc_finish(0)

</stderr_txt>
]]>

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