Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:03:17 (3636105): wrapper (7.7.26015): starting
00:03:17 (3636105): wrapper: running run_atlas (--nthreads 12)
[2026-01-09 00:03:17] Arguments: --nthreads 12
[2026-01-09 00:03:17] Threads: 12
[2026-01-09 00:03:17] Checking for CVMFS
[2026-01-09 00:03:18] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 00:03:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 00:03:18] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 00:03:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 00:03:19] 2.13.3.0 6683 13543 157848 154931 2 181 31567282 40960001 19583 16776704 0 17989134 99.723 16151116 40032 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-09 00:03:19] CVMFS is ok
[2026-01-09 00:03:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 00:03:19] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 00:03:19] Further information can be found at the LHC@home message board.
[2026-01-09 00:03:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 00:03:19] Checking for apptainer binary...
[2026-01-09 00:03:19] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 00:03:19] Running /usr/bin/apptainer --version
[2026-01-09 00:03:19] apptainer version 1.4.5-2.el9
[2026-01-09 00:03:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 00:03:20] c-211-35-3.aglt2.org
[2026-01-09 00:03:20] apptainer works
[2026-01-09 00:03:20] Set ATHENA_PROC_NUMBER=12
[2026-01-09 00:03:20] Set ATHENA_CORE_NUMBER=12
[2026-01-09 00:03:20] Starting ATLAS job with PandaID=6963151602
[2026-01-09 00:03:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 10:12:01]  *** The last 200 lines of the pilot log: ***
[2026-01-09 10:12:01] 2026-01-09 15:11:03,507 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 10:12:01] 2026-01-09 15:11:03,507 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 10:12:01] 2026-01-09 15:11:03,507 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 10:12:01] 2026-01-09 15:11:03,517 | INFO     | fitting pss+swap vs Time
[2026-01-09 10:12:01] 2026-01-09 15:11:03,518 | INFO     | sum of square deviations: 64985895841.22554
[2026-01-09 10:12:01] 2026-01-09 15:11:03,526 | INFO     | sum of deviations: 435986788091.512
[2026-01-09 10:12:01] 2026-01-09 15:11:03,526 | INFO     | mean x: 1767953348.86532
[2026-01-09 10:12:01] 2026-01-09 15:11:03,526 | INFO     | mean y: 2643066.8063973063
[2026-01-09 10:12:01] 2026-01-09 15:11:03,527 | INFO     | intersect: -11858458362.812473
[2026-01-09 10:12:01] 2026-01-09 15:11:03,527 | INFO     | chi2: 5.8618580540906695
[2026-01-09 10:12:01] 2026-01-09 15:11:03,528 | INFO     | sum of square deviations: 63358610583.05263
[2026-01-09 10:12:01] 2026-01-09 15:11:03,536 | INFO     | sum of deviations: 473077747353.26306
[2026-01-09 10:12:01] 2026-01-09 15:11:03,536 | INFO     | mean x: 1767953196.368421
[2026-01-09 10:12:01] 2026-01-09 15:11:03,536 | INFO     | mean y: 2646516.2614601017
[2026-01-09 10:12:01] 2026-01-09 15:11:03,536 | INFO     | intersect: -13198074078.260088
[2026-01-09 10:12:01] 2026-01-09 15:11:03,537 | INFO     | chi2: 5.128111049720942
[2026-01-09 10:12:01] 2026-01-09 15:11:03,537 | INFO     | current chi2=5.128111049720942 (change=12.517311023211933 %)
[2026-01-09 10:12:01] 2026-01-09 15:11:03,537 | INFO     | right removable region: 588
[2026-01-09 10:12:01] 2026-01-09 15:11:03,538 | INFO     | sum of square deviations: 63358478213.05262
[2026-01-09 10:12:01] 2026-01-09 15:11:03,546 | INFO     | sum of deviations: 238166804437.8421
[2026-01-09 10:12:01] 2026-01-09 15:11:03,546 | INFO     | mean x: 1767953501.368421
[2026-01-09 10:12:01] 2026-01-09 15:11:03,546 | INFO     | mean y: 2661591.1850594226
[2026-01-09 10:12:01] 2026-01-09 15:11:03,546 | INFO     | intersect: -6643139376.440862
[2026-01-09 10:12:01] 2026-01-09 15:11:03,547 | INFO     | chi2: 2.2749528146423734
[2026-01-09 10:12:01] 2026-01-09 15:11:03,547 | INFO     | current chi2=2.2749528146423734 (change=61.19058507302461 %)
[2026-01-09 10:12:01] 2026-01-09 15:11:03,548 | INFO     | sum of square deviations: 61758492376.1097
[2026-01-09 10:12:01] 2026-01-09 15:11:03,556 | INFO     | sum of deviations: 139126969335.5136
[2026-01-09 10:12:01] 2026-01-09 15:11:03,556 | INFO     | mean x: 1767953653.869863
[2026-01-09 10:12:01] 2026-01-09 15:11:03,556 | INFO     | mean y: 2671022.796232877
[2026-01-09 10:12:01] 2026-01-09 15:11:03,556 | INFO     | intersect: -3980101618.261814
[2026-01-09 10:12:01] 2026-01-09 15:11:03,557 | INFO     | chi2: 1.407933052300411
[2026-01-09 10:12:01] 2026-01-09 15:11:03,557 | INFO     | current chi2=1.407933052300411 (change=38.11154924891308 %)
[2026-01-09 10:12:01] 2026-01-09 15:11:03,558 | INFO     | sum of square deviations: 60185634215.41952
[2026-01-09 10:12:01] 2026-01-09 15:11:03,565 | INFO     | sum of deviations: 71220145561.02068
[2026-01-09 10:12:01] 2026-01-09 15:11:03,566 | INFO     | mean x: 1767953806.373057
[2026-01-09 10:12:01] 2026-01-09 15:11:03,566 | INFO     | mean y: 2677604.7962003453
[2026-01-09 10:12:01] 2026-01-09 15:11:03,566 | INFO     | intersect: -2089415119.264363
[2026-01-09 10:12:01] 2026-01-09 15:11:03,567 | INFO     | chi2: 1.0183438993387661
[2026-01-09 10:12:01] 2026-01-09 15:11:03,567 | INFO     | current chi2=1.0183438993387661 (change=27.670999862180818 %)
[2026-01-09 10:12:01] 2026-01-09 15:11:03,568 | INFO     | sum of square deviations: 58639777673.71585
[2026-01-09 10:12:01] 2026-01-09 15:11:03,575 | INFO     | sum of deviations: 25018217137.200348
[2026-01-09 10:12:01] 2026-01-09 15:11:03,575 | INFO     | mean x: 1767953958.8728223
[2026-01-09 10:12:01] 2026-01-09 15:11:03,576 | INFO     | mean y: 2682161.6602787455
[2026-01-09 10:12:01] 2026-01-09 15:11:03,576 | INFO     | intersect: -751602008.3405731
[2026-01-09 10:12:01] 2026-01-09 15:11:03,577 | INFO     | chi2: 0.8360396042665599
[2026-01-09 10:12:01] 2026-01-09 15:11:03,577 | INFO     | current chi2=0.8360396042665599 (change=17.902036354377003 %)
[2026-01-09 10:12:01] 2026-01-09 15:11:03,577 | INFO     | left removable region: 40
[2026-01-09 10:12:01] 2026-01-09 15:11:03,577 | INFO     | sum of square deviations: 51026517451.56209
[2026-01-09 10:12:01] 2026-01-09 15:11:03,584 | INFO     | sum of deviations: 27303139039.153286
[2026-01-09 10:12:01] 2026-01-09 15:11:03,584 | INFO     | mean x: 1767954385.8759124
[2026-01-09 10:12:01] 2026-01-09 15:11:03,585 | INFO     | mean y: 2689861.443430657
[2026-01-09 10:12:01] 2026-01-09 15:11:03,585 | INFO     | intersect: -943302669.955029
[2026-01-09 10:12:01] 2026-01-09 15:11:03,585 | INFO     | chi2: 0.0015426773194920206
[2026-01-09 10:12:01] 2026-01-09 15:11:03,586 | INFO     | current memory leak: 0.54 B/s (using 548 data points, chi2=0.00)
[2026-01-09 10:12:01] 2026-01-09 15:11:03,587 | INFO     | could have reported an average CPU frequency of 2668 MHz (23 samples)
[2026-01-09 10:12:01] 2026-01-09 15:11:03,587 | INFO     | ..............................
[2026-01-09 10:12:01] 2026-01-09 15:11:03,587 | INFO     | . Timing measurements:
[2026-01-09 10:12:01] 2026-01-09 15:11:03,587 | INFO     | . get job = 0 s
[2026-01-09 10:12:01] 2026-01-09 15:11:03,587 | INFO     | . initial setup = 10 s
[2026-01-09 10:12:01] 2026-01-09 15:11:03,587 | INFO     | . payload setup = 55 s
[2026-01-09 10:12:01] 2026-01-09 15:11:03,587 | INFO     | . stage-in = 0 s
[2026-01-09 10:12:01] 2026-01-09 15:11:03,587 | INFO     | . payload execution = 36215 s
[2026-01-09 10:12:01] 2026-01-09 15:11:03,587 | INFO     | . stage-out = 3 s
[2026-01-09 10:12:01] 2026-01-09 15:11:03,587 | INFO     | . log creation = 0 s
[2026-01-09 10:12:01] 2026-01-09 15:11:03,587 | INFO     | ..............................
[2026-01-09 10:12:01] 2026-01-09 15:11:03,925 | INFO     | 
[2026-01-09 10:12:01] 2026-01-09 15:11:03,927 | INFO     | job summary report
[2026-01-09 10:12:01] 2026-01-09 15:11:03,927 | INFO     | --------------------------------------------------
[2026-01-09 10:12:01] 2026-01-09 15:11:03,927 | INFO     | PanDA job id: 6963151602
[2026-01-09 10:12:01] 2026-01-09 15:11:03,927 | INFO     | task id: 47898826
[2026-01-09 10:12:01] 2026-01-09 15:11:03,927 | INFO     | errors: (none)
[2026-01-09 10:12:01] 2026-01-09 15:11:03,927 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 10:12:01] 2026-01-09 15:11:03,927 | INFO     | pilot state: finished 
[2026-01-09 10:12:01] 2026-01-09 15:11:03,927 | INFO     | transexitcode: 0
[2026-01-09 10:12:01] 2026-01-09 15:11:03,928 | INFO     | exeerrorcode: 0
[2026-01-09 10:12:01] 2026-01-09 15:11:03,928 | INFO     | exeerrordiag: 
[2026-01-09 10:12:01] 2026-01-09 15:11:03,928 | INFO     | exitcode: 0
[2026-01-09 10:12:01] 2026-01-09 15:11:03,928 | INFO     | exitmsg: OK
[2026-01-09 10:12:01] 2026-01-09 15:11:03,928 | INFO     | cpuconsumptiontime: 60957 s
[2026-01-09 10:12:01] 2026-01-09 15:11:03,928 | INFO     | nevents: 400
[2026-01-09 10:12:01] 2026-01-09 15:11:03,928 | INFO     | neventsw: 0
[2026-01-09 10:12:01] 2026-01-09 15:11:03,928 | INFO     | pid: 3680832
[2026-01-09 10:12:01] 2026-01-09 15:11:03,928 | INFO     | pgrp: 3680832
[2026-01-09 10:12:01] 2026-01-09 15:11:03,928 | INFO     | corecount: 12
[2026-01-09 10:12:01] 2026-01-09 15:11:03,928 | INFO     | event service: False
[2026-01-09 10:12:01] 2026-01-09 15:11:03,929 | INFO     | sizes: {0: 2283800, 1: 2283999, 2: 2284027, 13: 2284027, 25: 2284083, 36: 2284111, 38: 2284529, 47: 2284557, 36276: 2325052, 36280: 2334050, 36283: 2334106, 36292:
[2026-01-09 10:12:01] 2026-01-09 15:11:03,929 | INFO     | --------------------------------------------------
[2026-01-09 10:12:01] 2026-01-09 15:11:03,929 | INFO     | 
[2026-01-09 10:12:01] 2026-01-09 15:11:03,929 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2026-01-09 10:12:01] 2026-01-09 15:11:03,956 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 10:12:01] 2026-01-09 15:11:03,956 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 10:12:01] 2026-01-09 15:11:03,956 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 10:12:01] 2026-01-09 15:11:03,956 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 10:12:01] 2026-01-09 15:11:03,957 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 10:12:01] 2026-01-09 15:11:03,957 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 10:12:01] 2026-01-09 15:11:03,957 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 10:12:01] 2026-01-09 15:11:03,957 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 10:12:01] 2026-01-09 15:11:03,957 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 10:12:01] 2026-01-09 15:11:03,957 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 10:12:01] 2026-01-09 15:11:03,957 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 10:12:01] 2026-01-09 15:11:03,957 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 10:12:01] 2026-01-09 15:11:03,957 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 10:12:01] 2026-01-09 15:11:03,957 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 10:12:01] 2026-01-09 15:11:03,958 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 10:12:01] 2026-01-09 15:11:03,958 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 10:12:01] 2026-01-09 15:11:03,958 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 10:12:01] 2026-01-09 15:11:03,958 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 10:12:01] 2026-01-09 15:11:03,958 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 10:12:01] 2026-01-09 15:11:03,958 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 10:12:01] 2026-01-09 15:11:03,958 | INFO     | job 6963151602 has completed (purged errors)
[2026-01-09 10:12:01] 2026-01-09 15:11:03,958 | INFO     | overall cleanup function is called
[2026-01-09 10:12:01] 2026-01-09 15:11:04,972 | INFO     | --- collectZombieJob: --- 10, [3680832]
[2026-01-09 10:12:01] 2026-01-09 15:11:04,973 | INFO     | zombie collector waiting for pid 3680832
[2026-01-09 10:12:01] 2026-01-09 15:11:04,973 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 10:12:01] 2026-01-09 15:11:04,973 | INFO     | collected zombie processes
[2026-01-09 10:12:01] 2026-01-09 15:11:04,973 | INFO     | will attempt to kill all subprocesses of pid=3680832
[2026-01-09 10:12:01] 2026-01-09 15:11:05,470 | INFO     | process IDs to be killed: [3680832] (in reverse order)
[2026-01-09 10:12:01] 2026-01-09 15:11:05,584 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 10:12:01] 2026-01-09 15:11:05,585 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 10:12:01] 2026-01-09 15:11:05,597 | INFO     | did not find any defunct processes belonging to 3680832
[2026-01-09 10:12:01] 2026-01-09 15:11:05,610 | INFO     | did not find any defunct processes belonging to 3680832
[2026-01-09 10:12:01] 2026-01-09 15:11:05,610 | INFO     | ready for new job
[2026-01-09 10:12:01] 2026-01-09 15:11:05,611 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 10:12:01] 2026-01-09 15:11:05,615 | INFO     | ***************************************
[2026-01-09 10:12:01] 2026-01-09 15:11:05,621 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 10:12:01] 2026-01-09 15:11:05,621 | INFO     | ***************************************
[2026-01-09 10:12:01] 2026-01-09 15:11:05,621 | INFO     | 
[2026-01-09 10:12:01] 2026-01-09 15:11:05,635 | INFO     | architecture information:
[2026-01-09 10:12:01] 2026-01-09 15:11:05,636 | INFO     | executing command: cat /etc/os-release
[2026-01-09 10:12:01] 2026-01-09 15:11:05,654 | INFO     | cat /etc/os-release:
[2026-01-09 10:12:01] NAME="CentOS Linux"
[2026-01-09 10:12:01] VERSION="7 (Core)"
[2026-01-09 10:12:01] ID="centos"
[2026-01-09 10:12:01] ID_LIKE="rhel fedora"
[2026-01-09 10:12:01] VERSION_ID="7"
[2026-01-09 10:12:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 10:12:01] ANSI_COLOR="0;31"
[2026-01-09 10:12:01] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 10:12:01] HOME_URL="https://www.centos.org/"
[2026-01-09 10:12:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 10:12:01] 
[2026-01-09 10:12:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 10:12:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 10:12:01] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 10:12:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 10:12:01] 
[2026-01-09 10:12:01] 2026-01-09 15:11:05,654 | INFO     | ***************************************
[2026-01-09 10:12:01] 2026-01-09 15:11:06,158 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2026-01-09 10:12:01] 2026-01-09 15:11:06,226 | INFO     | sufficient remaining disk space (127358992384 B)
[2026-01-09 10:12:01] 2026-01-09 15:11:06,226 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 10:12:01] 2026-01-09 15:11:06,226 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 10:12:01] 2026-01-09 15:11:06,226 | INFO     | update_server=False
[2026-01-09 10:12:01] 2026-01-09 15:11:06,226 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 10:12:01] 2026-01-09 15:11:06,227 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 10:12:01] 2026-01-09 15:11:06,503 | INFO     | all payload control threads have been joined
[2026-01-09 10:12:01] 2026-01-09 15:11:06,872 | INFO     | all job control threads have been joined
[2026-01-09 10:12:01] 2026-01-09 15:11:06,884 | INFO     | all data control threads have been joined
[2026-01-09 10:12:01] 2026-01-09 15:11:06,901 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 10:12:01] 2026-01-09 15:11:06,902 | INFO     | aborting loop
[2026-01-09 10:12:01] 2026-01-09 15:11:07,064 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 10:12:01] 2026-01-09 15:11:07,233 | INFO     | [job] retrieve thread has finished
[2026-01-09 10:12:01] 2026-01-09 15:11:07,400 | INFO     | [data] copytool_in thread has finished
[2026-01-09 10:12:01] 2026-01-09 15:11:07,407 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 10:12:01] 2026-01-09 15:11:07,471 | INFO     | [job] validate thread has finished
[2026-01-09 10:12:01] 2026-01-09 15:11:07,492 | INFO     | [payload] failed_post thread has finished
[2026-01-09 10:12:01] 2026-01-09 15:11:07,508 | INFO     | [payload] control thread has finished
[2026-01-09 10:12:01] 2026-01-09 15:11:07,791 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 10:12:01] 2026-01-09 15:11:07,814 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 10:12:01] 2026-01-09 15:11:07,879 | INFO     | [job] control thread has finished
[2026-01-09 10:12:01] 2026-01-09 15:11:07,891 | INFO     | [data] control thread has finished
[2026-01-09 10:12:01] 2026-01-09 15:11:07,908 | INFO     | [job] job monitor thread has finished
[2026-01-09 10:12:01] 2026-01-09 15:11:08,261 | INFO     | [payload] validate_post thread has finished
[2026-01-09 10:12:01] 2026-01-09 15:11:08,322 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 10:12:01] 2026-01-09 15:11:08,710 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 10:12:01] 2026-01-09 15:11:09,072 | INFO     | [data] copytool_out thread has finished
[2026-01-09 10:12:01] 2026-01-09 15:11:09,716 | INFO     | [job] queue monitor thread has finished
[2026-01-09 10:12:01] 2026-01-09 15:11:10,236 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 10:12:01] 2026-01-09 15:11:36,457 | INFO     | PID=3650999 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 10:12:01] 2026-01-09 15:11:36,462 | INFO     | .. there are 17 such processes running
[2026-01-09 10:12:01] 2026-01-09 15:11:36,462 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 10:12:01] 2026-01-09 15:11:36,463 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 10:12:01] 2026-01-09 15:11:36,463 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 10:12:01] 2026-01-09 15:11:54,119 | INFO     | [monitor] cgroup control has ended
[2026-01-09 10:12:01] 2026-01-09 15:11:55,842 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139945803228992)>', '<ExcThread(monitor, started 139945444361984)>']
[2026-01-09 10:12:01] 2026-01-09 15:11:56,620 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 10:12:01] 2026-01-09 15:11:56,621 | INFO     | [monitor] control thread has ended
[2026-01-09 10:12:01] 2026-01-09 15:12:00,868 | INFO     | all workflow threads have been joined
[2026-01-09 10:12:01] 2026-01-09 15:12:00,869 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 10:12:01] 2026-01-09 15:12:00,869 | INFO     | traces error code: 0
[2026-01-09 10:12:01] 2026-01-09 15:12:00,869 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 10:12:01] 2026-01-09 15:12:01,338 [wrapper] ==== pilot stdout END ====
[2026-01-09 10:12:01] 2026-01-09 15:12:01,354 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 10:12:01] 2026-01-09 15:12:01,370 [wrapper] pilotpid: 3650999
[2026-01-09 10:12:01] 2026-01-09 15:12:01,373 [wrapper] Pilot exit status: 0
[2026-01-09 10:12:01] 2026-01-09 15:12:01,477 [wrapper] pandaids: 6963151602
[2026-01-09 10:12:01] 2026-01-09 15:12:01,589 [wrapper] cleanup supervisor_pilot  823871 3651000
[2026-01-09 10:12:01] 2026-01-09 15:12:01,591 [wrapper] Test setup, not cleaning
[2026-01-09 10:12:01] 2026-01-09 15:12:01,594 [wrapper] apfmon messages muted
[2026-01-09 10:12:01] 2026-01-09 15:12:01,596 [wrapper] ==== wrapper stdout END ====
[2026-01-09 10:12:01] 2026-01-09 15:12:01,599 [wrapper] ==== wrapper stderr END ====
[2026-01-09 10:12:01]  *** Error codes and diagnostics ***
[2026-01-09 10:12:01]     "exeErrorCode": 0,
[2026-01-09 10:12:01]     "exeErrorDiag": "",
[2026-01-09 10:12:01]     "pilotErrorCode": 0,
[2026-01-09 10:12:01]     "pilotErrorDiag": "",
[2026-01-09 10:12:01]  *** Listing of results directory ***
[2026-01-09 10:12:01] total 450240
[2026-01-09 10:12:01] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 11:02 pilot3.tar.gz
[2026-01-09 10:12:01] -rwx------. 1 boincer umatlas     36322 Jan  8 11:05 runpilot2-wrapper.sh
[2026-01-09 10:12:01] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 11:07 queuedata.json
[2026-01-09 10:12:01] -rw-r--r--. 1 boincer umatlas       100 Jan  9 00:03 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 10:12:01] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 00:03 run_atlas
[2026-01-09 10:12:01] -rw-r--r--. 1 boincer umatlas       105 Jan  9 00:03 job.xml
[2026-01-09 10:12:01] -rw-r--r--. 2 boincer umatlas 226493742 Jan  9 00:03 EVNT.47898824._001097.pool.root.1
[2026-01-09 10:12:01] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 00:03 start_atlas.sh
[2026-01-09 10:12:01] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 00:03 shared
[2026-01-09 10:12:01] -rw-r--r--. 2 boincer umatlas    592403 Jan  9 00:03 input.tar.gz
[2026-01-09 10:12:01] -rw-r--r--. 1 boincer umatlas         0 Jan  9 00:03 boinc_lockfile
[2026-01-09 10:12:01] -rw-r--r--. 1 boincer umatlas      2520 Jan  9 00:03 pandaJob.out
[2026-01-09 10:12:01] -rw-------. 1 boincer umatlas        57 Jan  9 00:03 setup.sh.local
[2026-01-09 10:12:01] -rw-------. 1 boincer umatlas    989771 Jan  9 00:04 agis_schedconf.cvmfs.json
[2026-01-09 10:12:01] drwx------. 5 boincer umatlas      4096 Jan  9 00:04 pilot3
[2026-01-09 10:12:01] -rw-------. 1 boincer umatlas 219955066 Jan  9 10:09 HITS.47898826._028640.pool.root.1
[2026-01-09 10:12:01] -rw-r--r--. 1 boincer umatlas       531 Jan  9 10:09 boinc_task_state.xml
[2026-01-09 10:12:01] -rw-------. 1 boincer umatlas      1043 Jan  9 10:10 memory_monitor_summary.json
[2026-01-09 10:12:01] -rw-------. 1 boincer umatlas   1516240 Jan  9 10:10 agis_ddmendpoints.agis.ALL.json
[2026-01-09 10:12:01] -rw-------. 1 boincer umatlas    810839 Jan  9 10:10 log.47898826._028640.job.log.tgz.1
[2026-01-09 10:12:01] -rw-------. 1 boincer umatlas      7833 Jan  9 10:11 heartbeat.json
[2026-01-09 10:12:01] -rw-------. 1 boincer umatlas        95 Jan  9 10:11 pilot_heartbeat.json
[2026-01-09 10:12:01] -rw-r--r--. 1 boincer umatlas      6859 Jan  9 10:11 init_data.xml
[2026-01-09 10:12:01] -rw-------. 1 boincer umatlas      4825 Jan  9 10:12 pilotlog.txt
[2026-01-09 10:12:01] -rw-r--r--. 1 boincer umatlas        28 Jan  9 10:12 wrapper_checkpoint.txt
[2026-01-09 10:12:01] -rw-------. 1 boincer umatlas   4530658 Jan  9 10:12 log.47898826._028640.job.log.1
[2026-01-09 10:12:01] -rw-r--r--. 1 boincer umatlas      8192 Jan  9 10:12 boinc_mmap_file
[2026-01-09 10:12:01] -rw-------. 1 boincer umatlas       357 Jan  9 10:12 output.list
[2026-01-09 10:12:01] -rw-r--r--. 1 boincer umatlas       620 Jan  9 10:12 runtime_log
[2026-01-09 10:12:01] -rw-------. 1 boincer umatlas   5355520 Jan  9 10:12 result.tar.gz
[2026-01-09 10:12:01] -rw-r--r--. 1 boincer umatlas      9355 Jan  9 10:12 runtime_log.err
[2026-01-09 10:12:01] -rw-------. 1 boincer umatlas       660 Jan  9 10:12 ig7NDmPh7x8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmH2kKDm3UhZwm.diag
[2026-01-09 10:12:01] -rw-r--r--. 1 boincer umatlas     21049 Jan  9 10:12 stderr.txt
[2026-01-09 10:12:01] HITS file was successfully produced:
[2026-01-09 10:12:01] -rw-------. 1 boincer umatlas 219955066 Jan  9 10:09 shared/HITS.pool.root.1
[2026-01-09 10:12:01]  *** Contents of shared directory: ***
[2026-01-09 10:12:01] total 441824
[2026-01-09 10:12:01] -rw-r--r--. 2 boincer umatlas 226493742 Jan  9 00:03 ATLAS.root_0
[2026-01-09 10:12:01] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 00:03 start_atlas.sh
[2026-01-09 10:12:01] -rw-r--r--. 2 boincer umatlas    592403 Jan  9 00:03 input.tar.gz
[2026-01-09 10:12:01] -rw-------. 1 boincer umatlas 219955066 Jan  9 10:09 HITS.pool.root.1
[2026-01-09 10:12:01] -rw-------. 1 boincer umatlas   5355520 Jan  9 10:12 result.tar.gz
10:12:03 (3636105): run_atlas exited; CPU time 62327.415694
10:12:03 (3636105): called boinc_finish(0)

</stderr_txt>
]]>

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