Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
06:25:11 (397001): wrapper (7.7.26015): starting
06:25:11 (397001): wrapper: running run_atlas (--nthreads 11)
[2026-01-09 06:25:11] Arguments: --nthreads 11
[2026-01-09 06:25:11] Threads: 11
[2026-01-09 06:25:11] Checking for CVMFS
[2026-01-09 06:25:11] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 06:25:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 06:25:12] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 06:25:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 06:25:12] 2.13.3.0 1684472 16809 179680 154942 2 132 23123391 40960000 7717 16776704 0 20165500 99.668 16596386 42485 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-09 06:25:12] CVMFS is ok
[2026-01-09 06:25:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 06:25:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 06:25:12] Further information can be found at the LHC@home message board.
[2026-01-09 06:25:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 06:25:12] Checking for apptainer binary...
[2026-01-09 06:25:12] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 06:25:12] Running /usr/bin/apptainer --version
[2026-01-09 06:25:12] apptainer version 1.4.5-2.el9
[2026-01-09 06:25:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 06:25:13] c-206-36.aglt2.org
[2026-01-09 06:25:13] apptainer works
[2026-01-09 06:25:13] Set ATHENA_PROC_NUMBER=11
[2026-01-09 06:25:13] Set ATHENA_CORE_NUMBER=11
[2026-01-09 06:25:13] Starting ATLAS job with PandaID=6963152626
[2026-01-09 06:25:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 12:36:45]  *** The last 200 lines of the pilot log: ***
[2026-01-09 12:36:45] 2026-01-09 17:36:08,759 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6963152626/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 12:36:45] 2026-01-09 17:36:08,760 | INFO     | extracted standard info from prmon json
[2026-01-09 12:36:45] 2026-01-09 17:36:08,760 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 12:36:45] 2026-01-09 17:36:08,760 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 12:36:45] 2026-01-09 17:36:08,794 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 12:36:45] 2026-01-09 17:36:08,795 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 12:36:45] 2026-01-09 17:36:08,828 | INFO     | fitting pss+swap vs Time
[2026-01-09 12:36:45] 2026-01-09 17:36:08,829 | INFO     | sum of square deviations: 14830020700.187326
[2026-01-09 12:36:45] 2026-01-09 17:36:08,832 | INFO     | sum of deviations: -62649645923.64461
[2026-01-09 12:36:45] 2026-01-09 17:36:08,833 | INFO     | mean x: 1767969038.584022
[2026-01-09 12:36:45] 2026-01-09 17:36:08,833 | INFO     | mean y: 2673045.5785123967
[2026-01-09 12:36:45] 2026-01-09 17:36:08,833 | INFO     | intersect: 7471484890.855049
[2026-01-09 12:36:45] 2026-01-09 17:36:08,838 | INFO     | chi2: 2.246539775851371
[2026-01-09 12:36:45] 2026-01-09 17:36:08,839 | INFO     | sum of square deviations: 14225599605.958155
[2026-01-09 12:36:45] 2026-01-09 17:36:08,842 | INFO     | sum of deviations: -37133657406.86031
[2026-01-09 12:36:45] 2026-01-09 17:36:08,869 | INFO     | mean x: 1767968886.0921788
[2026-01-09 12:36:45] 2026-01-09 17:36:08,870 | INFO     | mean y: 2679414.6927374303
[2026-01-09 12:36:45] 2026-01-09 17:36:08,870 | INFO     | intersect: 4617680029.122973
[2026-01-09 12:36:45] 2026-01-09 17:36:08,870 | INFO     | chi2: 1.5513328957744075
[2026-01-09 12:36:45] 2026-01-09 17:36:08,870 | INFO     | current chi2=1.5513328957744075 (change=30.94567421195563 %)
[2026-01-09 12:36:45] 2026-01-09 17:36:08,871 | INFO     | sum of square deviations: 13637829986.679903
[2026-01-09 12:36:45] 2026-01-09 17:36:08,873 | INFO     | sum of deviations: -36300757980.15865
[2026-01-09 12:36:45] 2026-01-09 17:36:08,924 | INFO     | mean x: 1767968733.6005666
[2026-01-09 12:36:45] 2026-01-09 17:36:08,924 | INFO     | mean y: 2679630.793201133
[2026-01-09 12:36:45] 2026-01-09 17:36:08,924 | INFO     | intersect: 4708604633.348969
[2026-01-09 12:36:45] 2026-01-09 17:36:08,924 | INFO     | chi2: 1.5508078401437244
[2026-01-09 12:36:45] 2026-01-09 17:36:08,924 | INFO     | current chi2=1.5508078401437244 (change=0.0338454520053838 %)
[2026-01-09 12:36:45] 2026-01-09 17:36:08,925 | INFO     | right removable region: 352
[2026-01-09 12:36:45] 2026-01-09 17:36:08,925 | INFO     | sum of square deviations: 14225470285.958158
[2026-01-09 12:36:45] 2026-01-09 17:36:08,928 | INFO     | sum of deviations: -118702530308.79056
[2026-01-09 12:36:45] 2026-01-09 17:36:08,928 | INFO     | mean x: 1767969191.0921788
[2026-01-09 12:36:45] 2026-01-09 17:36:08,928 | INFO     | mean y: 2687089.539106145
[2026-01-09 12:36:45] 2026-01-09 17:36:08,928 | INFO     | intersect: 14755269062.015667
[2026-01-09 12:36:45] 2026-01-09 17:36:08,929 | INFO     | chi2: 0.8529496263882459
[2026-01-09 12:36:45] 2026-01-09 17:36:08,929 | INFO     | current chi2=0.8529496263882459 (change=62.032738723043366 %)
[2026-01-09 12:36:45] 2026-01-09 17:36:08,929 | INFO     | sum of square deviations: 13637571346.679903
[2026-01-09 12:36:45] 2026-01-09 17:36:08,932 | INFO     | sum of deviations: -116786632208.62323
[2026-01-09 12:36:45] 2026-01-09 17:36:08,932 | INFO     | mean x: 1767969343.6005666
[2026-01-09 12:36:45] 2026-01-09 17:36:08,932 | INFO     | mean y: 2686585.1161473086
[2026-01-09 12:36:45] 2026-01-09 17:36:08,932 | INFO     | intersect: 15142859291.707872
[2026-01-09 12:36:45] 2026-01-09 17:36:08,933 | INFO     | chi2: 0.8477470774506561
[2026-01-09 12:36:45] 2026-01-09 17:36:08,933 | INFO     | current chi2=0.8477470774506561 (change=0.6099479707400282 %)
[2026-01-09 12:36:45] 2026-01-09 17:36:08,933 | INFO     | left removable region: 20
[2026-01-09 12:36:45] 2026-01-09 17:36:08,933 | INFO     | sum of square deviations: 11345307422.16859
[2026-01-09 12:36:45] 2026-01-09 17:36:08,939 | INFO     | sum of deviations: -76579479618.9277
[2026-01-09 12:36:45] 2026-01-09 17:36:08,940 | INFO     | mean x: 1767969313.1325302
[2026-01-09 12:36:45] 2026-01-09 17:36:08,940 | INFO     | mean y: 2690142.7710843375
[2026-01-09 12:36:45] 2026-01-09 17:36:08,940 | INFO     | intersect: 11936273336.591948
[2026-01-09 12:36:45] 2026-01-09 17:36:08,940 | INFO     | chi2: 0.13567711042197303
[2026-01-09 12:36:45] 2026-01-09 17:36:08,940 | INFO     | current memory leak: -6.75 B/s (using 332 data points, chi2=0.14)
[2026-01-09 12:36:45] 2026-01-09 17:36:08,941 | INFO     | could have reported an average CPU frequency of 3234 MHz (16 samples)
[2026-01-09 12:36:45] 2026-01-09 17:36:08,941 | INFO     | ..............................
[2026-01-09 12:36:45] 2026-01-09 17:36:08,941 | INFO     | . Timing measurements:
[2026-01-09 12:36:45] 2026-01-09 17:36:08,941 | INFO     | . get job = 0 s
[2026-01-09 12:36:45] 2026-01-09 17:36:08,941 | INFO     | . initial setup = 3 s
[2026-01-09 12:36:45] 2026-01-09 17:36:08,941 | INFO     | . payload setup = 15 s
[2026-01-09 12:36:45] 2026-01-09 17:36:08,941 | INFO     | . stage-in = 0 s
[2026-01-09 12:36:45] 2026-01-09 17:36:08,941 | INFO     | . payload execution = 22137 s
[2026-01-09 12:36:45] 2026-01-09 17:36:08,941 | INFO     | . stage-out = 6 s
[2026-01-09 12:36:45] 2026-01-09 17:36:08,941 | INFO     | . log creation = 1 s
[2026-01-09 12:36:45] 2026-01-09 17:36:08,941 | INFO     | ..............................
[2026-01-09 12:36:45] 2026-01-09 17:36:09,109 | INFO     | 
[2026-01-09 12:36:45] 2026-01-09 17:36:09,113 | INFO     | job summary report
[2026-01-09 12:36:45] 2026-01-09 17:36:09,113 | INFO     | --------------------------------------------------
[2026-01-09 12:36:45] 2026-01-09 17:36:09,113 | INFO     | PanDA job id: 6963152626
[2026-01-09 12:36:45] 2026-01-09 17:36:09,113 | INFO     | task id: 47898826
[2026-01-09 12:36:45] 2026-01-09 17:36:09,113 | INFO     | errors: (none)
[2026-01-09 12:36:45] 2026-01-09 17:36:09,113 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 12:36:45] 2026-01-09 17:36:09,113 | INFO     | pilot state: finished 
[2026-01-09 12:36:45] 2026-01-09 17:36:09,113 | INFO     | transexitcode: 0
[2026-01-09 12:36:45] 2026-01-09 17:36:09,113 | INFO     | exeerrorcode: 0
[2026-01-09 12:36:45] 2026-01-09 17:36:09,124 | INFO     | exeerrordiag: 
[2026-01-09 12:36:45] 2026-01-09 17:36:09,125 | INFO     | exitcode: 0
[2026-01-09 12:36:45] 2026-01-09 17:36:09,125 | INFO     | exitmsg: OK
[2026-01-09 12:36:45] 2026-01-09 17:36:09,125 | INFO     | cpuconsumptiontime: 46423 s
[2026-01-09 12:36:45] 2026-01-09 17:36:09,125 | INFO     | nevents: 400
[2026-01-09 12:36:45] 2026-01-09 17:36:09,125 | INFO     | neventsw: 0
[2026-01-09 12:36:45] 2026-01-09 17:36:09,125 | INFO     | pid: 407472
[2026-01-09 12:36:45] 2026-01-09 17:36:09,125 | INFO     | pgrp: 407472
[2026-01-09 12:36:45] 2026-01-09 17:36:09,125 | INFO     | corecount: 11
[2026-01-09 12:36:45] 2026-01-09 17:36:09,125 | INFO     | event service: False
[2026-01-09 12:36:45] 2026-01-09 17:36:09,125 | INFO     | sizes: {0: 2283797, 1: 2283996, 11: 2283996, 12: 2284286, 22: 2284314, 22158: 2318988, 22166: 2328014, 22169: 2328070, 22199: 2328264}
[2026-01-09 12:36:45] 2026-01-09 17:36:09,135 | INFO     | --------------------------------------------------
[2026-01-09 12:36:45] 2026-01-09 17:36:09,135 | INFO     | 
[2026-01-09 12:36:45] 2026-01-09 17:36:09,135 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-09 12:36:45] 2026-01-09 17:36:09,169 | INFO     | time since job start (22232s) is within the limit (349056.0s)
[2026-01-09 12:36:45] 2026-01-09 17:36:09,169 | INFO     | 22235s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2026-01-09 12:36:45] 2026-01-09 17:36:09,220 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 12:36:45] 2026-01-09 17:36:09,221 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 12:36:45] 2026-01-09 17:36:09,221 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 12:36:45] 2026-01-09 17:36:09,221 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 12:36:45] 2026-01-09 17:36:09,221 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 12:36:45] 2026-01-09 17:36:09,221 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 12:36:45] 2026-01-09 17:36:09,221 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 12:36:45] 2026-01-09 17:36:09,221 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 12:36:45] 2026-01-09 17:36:09,221 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 12:36:45] 2026-01-09 17:36:09,221 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 12:36:45] 2026-01-09 17:36:09,221 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 12:36:45] 2026-01-09 17:36:09,221 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 12:36:45] 2026-01-09 17:36:09,221 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 12:36:45] 2026-01-09 17:36:09,221 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 12:36:45] 2026-01-09 17:36:09,221 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 12:36:45] 2026-01-09 17:36:09,221 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 12:36:45] 2026-01-09 17:36:09,221 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 12:36:45] 2026-01-09 17:36:09,222 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 12:36:45] 2026-01-09 17:36:09,222 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 12:36:45] 2026-01-09 17:36:09,222 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 12:36:45] 2026-01-09 17:36:09,222 | INFO     | job 6963152626 has completed (purged errors)
[2026-01-09 12:36:45] 2026-01-09 17:36:09,222 | INFO     | overall cleanup function is called
[2026-01-09 12:36:45] 2026-01-09 17:36:10,240 | INFO     | --- collectZombieJob: --- 10, [407472]
[2026-01-09 12:36:45] 2026-01-09 17:36:10,241 | INFO     | zombie collector waiting for pid 407472
[2026-01-09 12:36:45] 2026-01-09 17:36:10,241 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 12:36:45] 2026-01-09 17:36:10,241 | INFO     | collected zombie processes
[2026-01-09 12:36:45] 2026-01-09 17:36:10,241 | INFO     | will attempt to kill all subprocesses of pid=407472
[2026-01-09 12:36:45] 2026-01-09 17:36:11,443 | INFO     | process IDs to be killed: [407472] (in reverse order)
[2026-01-09 12:36:45] 2026-01-09 17:36:11,798 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 12:36:45] 2026-01-09 17:36:11,799 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 12:36:45] 2026-01-09 17:36:11,827 | INFO     | did not find any defunct processes belonging to 407472
[2026-01-09 12:36:45] 2026-01-09 17:36:11,865 | INFO     | did not find any defunct processes belonging to 407472
[2026-01-09 12:36:45] 2026-01-09 17:36:11,874 | INFO     | ready for new job
[2026-01-09 12:36:45] 2026-01-09 17:36:11,874 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 12:36:45] 2026-01-09 17:36:11,876 | INFO     | ***************************************
[2026-01-09 12:36:45] 2026-01-09 17:36:11,876 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 12:36:45] 2026-01-09 17:36:11,876 | INFO     | ***************************************
[2026-01-09 12:36:45] 2026-01-09 17:36:11,876 | INFO     | 
[2026-01-09 12:36:45] 2026-01-09 17:36:11,888 | INFO     | architecture information:
[2026-01-09 12:36:45] 2026-01-09 17:36:11,896 | INFO     | executing command: cat /etc/os-release
[2026-01-09 12:36:45] 2026-01-09 17:36:12,094 | INFO     | cat /etc/os-release:
[2026-01-09 12:36:45] NAME="CentOS Linux"
[2026-01-09 12:36:45] VERSION="7 (Core)"
[2026-01-09 12:36:45] ID="centos"
[2026-01-09 12:36:45] ID_LIKE="rhel fedora"
[2026-01-09 12:36:45] VERSION_ID="7"
[2026-01-09 12:36:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 12:36:45] ANSI_COLOR="0;31"
[2026-01-09 12:36:45] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 12:36:45] HOME_URL="https://www.centos.org/"
[2026-01-09 12:36:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 12:36:45] 
[2026-01-09 12:36:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 12:36:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 12:36:45] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 12:36:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 12:36:45] 
[2026-01-09 12:36:45] 2026-01-09 17:36:12,094 | INFO     | ***************************************
[2026-01-09 12:36:45] 2026-01-09 17:36:12,600 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-09 12:36:45] 2026-01-09 17:36:12,736 | INFO     | sufficient remaining disk space (84809875456 B)
[2026-01-09 12:36:45] 2026-01-09 17:36:12,736 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 12:36:45] 2026-01-09 17:36:12,736 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 12:36:45] 2026-01-09 17:36:12,736 | INFO     | update_server=False
[2026-01-09 12:36:45] 2026-01-09 17:36:12,736 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 12:36:45] 2026-01-09 17:36:12,737 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 12:36:45] 2026-01-09 17:36:12,967 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-09 12:36:45] 2026-01-09 17:36:12,968 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-09 12:36:45] 2026-01-09 17:36:12,968 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 12:36:45] 2026-01-09 17:36:12,968 | INFO     | will abort loop
[2026-01-09 12:36:45] 2026-01-09 17:36:13,199 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 12:36:45] 2026-01-09 17:36:13,347 | INFO     | all job control threads have been joined
[2026-01-09 12:36:45] 2026-01-09 17:36:13,445 | INFO     | all payload control threads have been joined
[2026-01-09 12:36:45] 2026-01-09 17:36:13,531 | INFO     | all data control threads have been joined
[2026-01-09 12:36:45] 2026-01-09 17:36:13,742 | INFO     | [job] retrieve thread has finished
[2026-01-09 12:36:45] 2026-01-09 17:36:13,898 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 12:36:45] 2026-01-09 17:36:13,973 | INFO     | [job] job monitor thread has finished
[2026-01-09 12:36:45] 2026-01-09 17:36:14,028 | INFO     | [payload] validate_post thread has finished
[2026-01-09 12:36:45] 2026-01-09 17:36:14,081 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 12:36:45] 2026-01-09 17:36:14,111 | INFO     | [job] validate thread has finished
[2026-01-09 12:36:45] 2026-01-09 17:36:14,123 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 12:36:45] 2026-01-09 17:36:14,353 | INFO     | [job] control thread has finished
[2026-01-09 12:36:45] 2026-01-09 17:36:14,451 | INFO     | [payload] control thread has finished
[2026-01-09 12:36:45] 2026-01-09 17:36:14,521 | INFO     | [payload] failed_post thread has finished
[2026-01-09 12:36:45] 2026-01-09 17:36:14,534 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 12:36:45] 2026-01-09 17:36:14,541 | INFO     | [data] control thread has finished
[2026-01-09 12:36:45] 2026-01-09 17:36:14,673 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 12:36:45] 2026-01-09 17:36:14,744 | INFO     | [data] copytool_out thread has finished
[2026-01-09 12:36:45] 2026-01-09 17:36:14,939 | INFO     | [data] copytool_in thread has finished
[2026-01-09 12:36:45] 2026-01-09 17:36:15,129 | INFO     | [job] queue monitor thread has finished
[2026-01-09 12:36:45] 2026-01-09 17:36:16,422 | INFO     | [monitor] cgroup control has ended
[2026-01-09 12:36:45] 2026-01-09 17:36:17,210 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 12:36:45] 2026-01-09 17:36:18,490 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140153165358912)>', '<ExcThread(monitor, started 140152819144448)>']
[2026-01-09 12:36:45] 2026-01-09 17:36:23,518 | INFO     | all workflow threads have been joined
[2026-01-09 12:36:45] 2026-01-09 17:36:23,519 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 12:36:45] 2026-01-09 17:36:23,519 | INFO     | traces error code: 0
[2026-01-09 12:36:45] 2026-01-09 17:36:23,519 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 12:36:45] 2026-01-09 17:36:43,346 | INFO     | PID=400683 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-09 12:36:45] 2026-01-09 17:36:43,347 | INFO     | .. there are 11 such processes running
[2026-01-09 12:36:45] 2026-01-09 17:36:43,347 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 12:36:45] 2026-01-09 17:36:43,347 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 12:36:45] 2026-01-09 17:36:43,347 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 12:36:45] 2026-01-09 17:36:43,347 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 12:36:45] 2026-01-09 17:36:43,348 | INFO     | [monitor] control thread has ended
[2026-01-09 12:36:45] 2026-01-09 17:36:43,977 [wrapper] ==== pilot stdout END ====
[2026-01-09 12:36:45] 2026-01-09 17:36:44,025 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 12:36:45] 2026-01-09 17:36:44,059 [wrapper] pilotpid: 400683
[2026-01-09 12:36:45] 2026-01-09 17:36:44,104 [wrapper] Pilot exit status: 0
[2026-01-09 12:36:45] 2026-01-09 17:36:44,306 [wrapper] pandaids: 6963152626
[2026-01-09 12:36:45] 2026-01-09 17:36:44,654 [wrapper] cleanup supervisor_pilot 1062620 400684
[2026-01-09 12:36:45] 2026-01-09 17:36:44,658 [wrapper] Test setup, not cleaning
[2026-01-09 12:36:45] 2026-01-09 17:36:44,695 [wrapper] apfmon messages muted
[2026-01-09 12:36:45] 2026-01-09 17:36:44,699 [wrapper] ==== wrapper stdout END ====
[2026-01-09 12:36:45] 2026-01-09 17:36:44,716 [wrapper] ==== wrapper stderr END ====
[2026-01-09 12:36:45]  *** Error codes and diagnostics ***
[2026-01-09 12:36:45]     "exeErrorCode": 0,
[2026-01-09 12:36:45]     "exeErrorDiag": "",
[2026-01-09 12:36:45]     "pilotErrorCode": 0,
[2026-01-09 12:36:45]     "pilotErrorDiag": "",
[2026-01-09 12:36:45]  *** Listing of results directory ***
[2026-01-09 12:36:45] total 446332
[2026-01-09 12:36:45] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 11:02 pilot3.tar.gz
[2026-01-09 12:36:45] -rwx------. 1 boincer umatlas     36322 Jan  8 11:06 runpilot2-wrapper.sh
[2026-01-09 12:36:45] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 11:09 queuedata.json
[2026-01-09 12:36:45] -rw-r--r--. 1 boincer umatlas       100 Jan  9 06:25 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 12:36:45] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 06:25 run_atlas
[2026-01-09 12:36:45] -rw-r--r--. 1 boincer umatlas       105 Jan  9 06:25 job.xml
[2026-01-09 12:36:45] -rw-r--r--. 2 boincer umatlas 225896788 Jan  9 06:25 EVNT.47898824._000876.pool.root.1
[2026-01-09 12:36:45] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 06:25 start_atlas.sh
[2026-01-09 12:36:45] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 06:25 shared
[2026-01-09 12:36:45] -rw-r--r--. 2 boincer umatlas    592395 Jan  9 06:25 input.tar.gz
[2026-01-09 12:36:45] -rw-r--r--. 1 boincer umatlas         0 Jan  9 06:25 boinc_lockfile
[2026-01-09 12:36:45] -rw-r--r--. 1 boincer umatlas      2518 Jan  9 06:25 pandaJob.out
[2026-01-09 12:36:45] -rw-------. 1 boincer umatlas        57 Jan  9 06:25 setup.sh.local
[2026-01-09 12:36:45] -rw-------. 1 boincer umatlas    989377 Jan  9 06:25 agis_schedconf.cvmfs.json
[2026-01-09 12:36:45] drwx------. 5 boincer umatlas      4096 Jan  9 06:25 pilot3
[2026-01-09 12:36:45] -rw-r--r--. 1 boincer umatlas      6905 Jan  9 12:27 init_data.xml
[2026-01-09 12:36:45] -rw-------. 1 boincer umatlas 220367661 Jan  9 12:34 HITS.47898826._029384.pool.root.1
[2026-01-09 12:36:45] -rw-r--r--. 1 boincer umatlas       531 Jan  9 12:34 boinc_task_state.xml
[2026-01-09 12:36:45] -rw-------. 1 boincer umatlas      1033 Jan  9 12:35 memory_monitor_summary.json
[2026-01-09 12:36:45] -rw-------. 1 boincer umatlas   1516240 Jan  9 12:35 agis_ddmendpoints.agis.ALL.json
[2026-01-09 12:36:45] -rw-------. 1 boincer umatlas    603004 Jan  9 12:35 log.47898826._029384.job.log.tgz.1
[2026-01-09 12:36:45] -rw-------. 1 boincer umatlas      7782 Jan  9 12:36 heartbeat.json
[2026-01-09 12:36:45] -rw-r--r--. 1 boincer umatlas        28 Jan  9 12:36 wrapper_checkpoint.txt
[2026-01-09 12:36:45] -rw-r--r--. 1 boincer umatlas      8192 Jan  9 12:36 boinc_mmap_file
[2026-01-09 12:36:45] -rw-------. 1 boincer umatlas        95 Jan  9 12:36 pilot_heartbeat.json
[2026-01-09 12:36:45] -rw-------. 1 boincer umatlas       822 Jan  9 12:36 pilotlog.txt
[2026-01-09 12:36:45] -rw-------. 1 boincer umatlas   2830782 Jan  9 12:36 log.47898826._029384.job.log.1
[2026-01-09 12:36:45] -rw-------. 1 boincer umatlas       357 Jan  9 12:36 output.list
[2026-01-09 12:36:45] -rw-r--r--. 1 boincer umatlas       620 Jan  9 12:36 runtime_log
[2026-01-09 12:36:45] -rw-------. 1 boincer umatlas   3450880 Jan  9 12:36 result.tar.gz
[2026-01-09 12:36:45] -rw-r--r--. 1 boincer umatlas      9345 Jan  9 12:36 runtime_log.err
[2026-01-09 12:36:45] -rw-------. 1 boincer umatlas       657 Jan  9 12:36 iJUNDmMi7x8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmZrfKDmnundAo.diag
[2026-01-09 12:36:45] -rw-r--r--. 1 boincer umatlas     21214 Jan  9 12:36 stderr.txt
[2026-01-09 12:36:45] HITS file was successfully produced:
[2026-01-09 12:36:45] -rw-------. 1 boincer umatlas 220367661 Jan  9 12:34 shared/HITS.pool.root.1
[2026-01-09 12:36:45]  *** Contents of shared directory: ***
[2026-01-09 12:36:45] total 439780
[2026-01-09 12:36:45] -rw-r--r--. 2 boincer umatlas 225896788 Jan  9 06:25 ATLAS.root_0
[2026-01-09 12:36:45] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 06:25 start_atlas.sh
[2026-01-09 12:36:45] -rw-r--r--. 2 boincer umatlas    592395 Jan  9 06:25 input.tar.gz
[2026-01-09 12:36:45] -rw-------. 1 boincer umatlas 220367661 Jan  9 12:34 HITS.pool.root.1
[2026-01-09 12:36:45] -rw-------. 1 boincer umatlas   3450880 Jan  9 12:36 result.tar.gz
12:36:47 (397001): run_atlas exited; CPU time 46744.751168
12:36:47 (397001): called boinc_finish(0)

</stderr_txt>
]]>

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