Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:01:39 (3520126): wrapper (7.7.26015): starting
00:01:39 (3520126): wrapper: running run_atlas (--nthreads 12)
[2026-01-09 00:01:39] Arguments: --nthreads 12
[2026-01-09 00:01:39] Threads: 12
[2026-01-09 00:01:39] Checking for CVMFS
[2026-01-09 00:01:40] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 00:01:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 00:01:40] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 00:01:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 00:01:42] 2.13.3.0 17216 92828 406548 154931 0 806 26409118 32935936 34372 16776704 0 1336006409 99.635 1298284444 50017 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-09 00:01:42] CVMFS is ok
[2026-01-09 00:01:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 00:01:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 00:01:42] Further information can be found at the LHC@home message board.
[2026-01-09 00:01:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 00:01:42] Checking for apptainer binary...
[2026-01-09 00:01:42] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 00:01:42] Running /usr/bin/apptainer --version
[2026-01-09 00:01:42] apptainer version 1.4.5-2.el9
[2026-01-09 00:01:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 00:01:42] c7-9-14.aglt2.org
[2026-01-09 00:01:42] apptainer works
[2026-01-09 00:01:42] Set ATHENA_PROC_NUMBER=12
[2026-01-09 00:01:42] Set ATHENA_CORE_NUMBER=12
[2026-01-09 00:01:43] Starting ATLAS job with PandaID=6963152192
[2026-01-09 00:01:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 03:17:25]  *** The last 200 lines of the pilot log: ***
[2026-01-09 03:17:25] 2026-01-09 08:16:08,894 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 03:17:25] 2026-01-09 08:16:10,821 | INFO     | time since job start (11591s) is within the limit (349056.0s)
[2026-01-09 03:17:25] 2026-01-09 08:16:11,408 | INFO     | monitor loop #708: job 0:6963152192 is in state 'finished'
[2026-01-09 03:17:25] 2026-01-09 08:16:11,408 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 03:17:25] 2026-01-09 08:16:12,828 | INFO     | time since job start (11593s) is within the limit (349056.0s)
[2026-01-09 03:17:25] 2026-01-09 08:16:13,913 | INFO     | monitor loop #709: job 0:6963152192 is in state 'finished'
[2026-01-09 03:17:25] 2026-01-09 08:16:13,913 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 03:17:25] 2026-01-09 08:16:14,457 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-09 03:17:25] 2026-01-09 08:16:14,482 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3795.674812500001
[2026-01-09 03:17:25] 2026-01-09 08:16:14,526 | INFO     | using path: /tmp/boinchome/slots/9/PanDA_Pilot-6963152192/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 03:17:25] 2026-01-09 08:16:14,527 | INFO     | extracted standard info from prmon json
[2026-01-09 03:17:25] 2026-01-09 08:16:14,527 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 03:17:25] 2026-01-09 08:16:14,527 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 03:17:25] 2026-01-09 08:16:14,532 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 03:17:25] 2026-01-09 08:16:14,532 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 03:17:25] 2026-01-09 08:16:14,535 | INFO     | fitting pss+swap vs Time
[2026-01-09 03:17:25] 2026-01-09 08:16:14,535 | INFO     | sum of square deviations: 2027662112.5026758
[2026-01-09 03:17:25] 2026-01-09 08:16:14,535 | INFO     | sum of deviations: 49438652286.791435
[2026-01-09 03:17:25] 2026-01-09 08:16:14,536 | INFO     | mean x: 1767940828.1550803
[2026-01-09 03:17:25] 2026-01-09 08:16:14,536 | INFO     | mean y: 2615243.9037433155
[2026-01-09 03:17:25] 2026-01-09 08:16:14,536 | INFO     | intersect: -43103487754.14484
[2026-01-09 03:17:25] 2026-01-09 08:16:14,536 | INFO     | chi2: 3.4051074044536764
[2026-01-09 03:17:25] 2026-01-09 08:16:14,536 | INFO     | sum of square deviations: 1869333104.8791208
[2026-01-09 03:17:25] 2026-01-09 08:16:14,544 | INFO     | sum of deviations: 61646251850.12084
[2026-01-09 03:17:25] 2026-01-09 08:16:14,544 | INFO     | mean x: 1767940675.6593406
[2026-01-09 03:17:25] 2026-01-09 08:16:14,544 | INFO     | mean y: 2626710.840659341
[2026-01-09 03:17:25] 2026-01-09 08:16:14,544 | INFO     | intersect: -58299938981.33226
[2026-01-09 03:17:25] 2026-01-09 08:16:14,544 | INFO     | chi2: 2.568891194909999
[2026-01-09 03:17:25] 2026-01-09 08:16:14,544 | INFO     | current chi2=2.568891194909999 (change=24.55770436051317 %)
[2026-01-09 03:17:25] 2026-01-09 08:16:14,544 | INFO     | right removable region: 181
[2026-01-09 03:17:25] 2026-01-09 08:16:14,544 | INFO     | sum of square deviations: 1869315414.8791208
[2026-01-09 03:17:25] 2026-01-09 08:16:14,545 | INFO     | sum of deviations: 2392799537.395607
[2026-01-09 03:17:25] 2026-01-09 08:16:14,545 | INFO     | mean x: 1767940980.6593406
[2026-01-09 03:17:25] 2026-01-09 08:16:14,545 | INFO     | mean y: 2660251.7967032967
[2026-01-09 03:17:25] 2026-01-09 08:16:14,545 | INFO     | intersect: -2260375898.760029
[2026-01-09 03:17:25] 2026-01-09 08:16:14,545 | INFO     | chi2: 0.9404811262048507
[2026-01-09 03:17:25] 2026-01-09 08:16:14,545 | INFO     | current chi2=0.9404811262048507 (change=72.380280135224 %)
[2026-01-09 03:17:25] 2026-01-09 08:16:14,545 | INFO     | sum of square deviations: 1719433992.2485883
[2026-01-09 03:17:25] 2026-01-09 08:16:14,546 | INFO     | sum of deviations: -3962957009.141241
[2026-01-09 03:17:25] 2026-01-09 08:16:14,546 | INFO     | mean x: 1767941133.1638417
[2026-01-09 03:17:25] 2026-01-09 08:16:14,546 | INFO     | mean y: 2666637.3841807907
[2026-01-09 03:17:25] 2026-01-09 08:16:14,546 | INFO     | intersect: 4077423061.303837
[2026-01-09 03:17:25] 2026-01-09 08:16:14,546 | INFO     | chi2: 0.8766950888834977
[2026-01-09 03:17:25] 2026-01-09 08:16:14,546 | INFO     | current chi2=0.8766950888834977 (change=6.782277234924486 %)
[2026-01-09 03:17:25] 2026-01-09 08:16:14,546 | INFO     | left removable region: 20
[2026-01-09 03:17:25] 2026-01-09 08:16:14,546 | INFO     | sum of square deviations: 1294012427.7763927
[2026-01-09 03:17:25] 2026-01-09 08:16:14,547 | INFO     | sum of deviations: 6589134983.763972
[2026-01-09 03:17:25] 2026-01-09 08:16:14,547 | INFO     | mean x: 1767941255.1801243
[2026-01-09 03:17:25] 2026-01-09 08:16:14,547 | INFO     | mean y: 2682897.801242236
[2026-01-09 03:17:25] 2026-01-09 08:16:14,547 | INFO     | intersect: -8999706355.727585
[2026-01-09 03:17:25] 2026-01-09 08:16:14,547 | INFO     | chi2: 0.0007836448240076415
[2026-01-09 03:17:25] 2026-01-09 08:16:14,547 | INFO     | current memory leak: 5.09 B/s (using 161 data points, chi2=0.00)
[2026-01-09 03:17:25] 2026-01-09 08:16:14,548 | INFO     | could have reported an average CPU frequency of 3790 MHz (10 samples)
[2026-01-09 03:17:25] 2026-01-09 08:16:14,548 | INFO     | ..............................
[2026-01-09 03:17:25] 2026-01-09 08:16:14,548 | INFO     | . Timing measurements:
[2026-01-09 03:17:25] 2026-01-09 08:16:14,548 | INFO     | . get job = 0 s
[2026-01-09 03:17:25] 2026-01-09 08:16:14,548 | INFO     | . initial setup = 5 s
[2026-01-09 03:17:25] 2026-01-09 08:16:14,548 | INFO     | . payload setup = 48 s
[2026-01-09 03:17:25] 2026-01-09 08:16:14,548 | INFO     | . stage-in = 0 s
[2026-01-09 03:17:25] 2026-01-09 08:16:14,548 | INFO     | . payload execution = 11427 s
[2026-01-09 03:17:25] 2026-01-09 08:16:14,548 | INFO     | . stage-out = 3 s
[2026-01-09 03:17:25] 2026-01-09 08:16:14,548 | INFO     | . log creation = 0 s
[2026-01-09 03:17:25] 2026-01-09 08:16:14,548 | INFO     | ..............................
[2026-01-09 03:17:25] 2026-01-09 08:16:14,835 | INFO     | time since job start (11595s) is within the limit (349056.0s)
[2026-01-09 03:17:25] 2026-01-09 08:16:14,861 | INFO     | 
[2026-01-09 03:17:25] 2026-01-09 08:16:14,862 | INFO     | job summary report
[2026-01-09 03:17:25] 2026-01-09 08:16:14,862 | INFO     | --------------------------------------------------
[2026-01-09 03:17:25] 2026-01-09 08:16:14,862 | INFO     | PanDA job id: 6963152192
[2026-01-09 03:17:25] 2026-01-09 08:16:14,862 | INFO     | task id: 47898826
[2026-01-09 03:17:25] 2026-01-09 08:16:14,862 | INFO     | errors: (none)
[2026-01-09 03:17:25] 2026-01-09 08:16:14,862 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 03:17:25] 2026-01-09 08:16:14,862 | INFO     | pilot state: finished 
[2026-01-09 03:17:25] 2026-01-09 08:16:14,862 | INFO     | transexitcode: 0
[2026-01-09 03:17:25] 2026-01-09 08:16:14,862 | INFO     | exeerrorcode: 0
[2026-01-09 03:17:25] 2026-01-09 08:16:14,862 | INFO     | exeerrordiag: 
[2026-01-09 03:17:25] 2026-01-09 08:16:14,862 | INFO     | exitcode: 0
[2026-01-09 03:17:25] 2026-01-09 08:16:14,862 | INFO     | exitmsg: OK
[2026-01-09 03:17:25] 2026-01-09 08:16:14,862 | INFO     | cpuconsumptiontime: 32202 s
[2026-01-09 03:17:25] 2026-01-09 08:16:14,862 | INFO     | nevents: 400
[2026-01-09 03:17:25] 2026-01-09 08:16:14,862 | INFO     | neventsw: 0
[2026-01-09 03:17:25] 2026-01-09 08:16:14,862 | INFO     | pid: 3588944
[2026-01-09 03:17:25] 2026-01-09 08:16:14,862 | INFO     | pgrp: 3588944
[2026-01-09 03:17:25] 2026-01-09 08:16:14,862 | INFO     | corecount: 12
[2026-01-09 03:17:25] 2026-01-09 08:16:14,862 | INFO     | event service: False
[2026-01-09 03:17:25] 2026-01-09 08:16:14,862 | INFO     | sizes: {0: 2283143, 1: 2283828, 2: 2284027, 13: 2284027, 24: 2284083, 34: 2284111, 35: 2284529, 45: 2284557, 11480: 2313785, 11481: 2313784, 11485: 2323174, 11516:
[2026-01-09 03:17:25] 2026-01-09 08:16:14,862 | INFO     | --------------------------------------------------
[2026-01-09 03:17:25] 2026-01-09 08:16:14,862 | INFO     | 
[2026-01-09 03:17:25] 2026-01-09 08:16:14,862 | INFO     | executing command: ls -lF /tmp/boinchome/slots/9
[2026-01-09 03:17:25] 2026-01-09 08:16:15,026 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 03:17:25] 2026-01-09 08:16:15,027 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 03:17:25] 2026-01-09 08:16:15,027 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 03:17:25] 2026-01-09 08:16:15,027 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 03:17:25] 2026-01-09 08:16:15,027 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 03:17:25] 2026-01-09 08:16:15,027 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 03:17:25] 2026-01-09 08:16:15,027 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 03:17:25] 2026-01-09 08:16:15,027 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 03:17:25] 2026-01-09 08:16:15,027 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 03:17:25] 2026-01-09 08:16:15,027 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 03:17:25] 2026-01-09 08:16:15,027 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 03:17:25] 2026-01-09 08:16:15,027 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 03:17:25] 2026-01-09 08:16:15,027 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 03:17:25] 2026-01-09 08:16:15,027 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 03:17:25] 2026-01-09 08:16:15,027 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 03:17:25] 2026-01-09 08:16:15,027 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 03:17:25] 2026-01-09 08:16:15,027 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 03:17:25] 2026-01-09 08:16:15,027 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 03:17:25] 2026-01-09 08:16:15,027 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 03:17:25] 2026-01-09 08:16:15,027 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 03:17:25] 2026-01-09 08:16:15,028 | INFO     | job 6963152192 has completed (purged errors)
[2026-01-09 03:17:25] 2026-01-09 08:16:15,028 | INFO     | overall cleanup function is called
[2026-01-09 03:17:25] 2026-01-09 08:16:16,061 | INFO     | --- collectZombieJob: --- 10, [3588944]
[2026-01-09 03:17:25] 2026-01-09 08:16:16,061 | INFO     | zombie collector waiting for pid 3588944
[2026-01-09 03:17:25] 2026-01-09 08:16:16,062 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 03:17:25] 2026-01-09 08:16:16,062 | INFO     | collected zombie processes
[2026-01-09 03:17:25] 2026-01-09 08:16:16,062 | INFO     | will attempt to kill all subprocesses of pid=3588944
[2026-01-09 03:17:25] 2026-01-09 08:16:17,212 | INFO     | process IDs to be killed: [3588944] (in reverse order)
[2026-01-09 03:17:25] 2026-01-09 08:16:17,439 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 03:17:25] 2026-01-09 08:16:17,440 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 03:17:25] 2026-01-09 08:16:17,529 | INFO     | did not find any defunct processes belonging to 3588944
[2026-01-09 03:17:25] 2026-01-09 08:16:17,564 | INFO     | did not find any defunct processes belonging to 3588944
[2026-01-09 03:17:25] 2026-01-09 08:16:17,565 | INFO     | ready for new job
[2026-01-09 03:17:25] 2026-01-09 08:16:17,565 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 03:17:25] 2026-01-09 08:16:17,568 | INFO     | ***************************************
[2026-01-09 03:17:25] 2026-01-09 08:16:17,568 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 03:17:25] 2026-01-09 08:16:17,568 | INFO     | ***************************************
[2026-01-09 03:17:25] 2026-01-09 08:16:17,568 | INFO     | 
[2026-01-09 03:17:25] 2026-01-09 08:16:17,599 | INFO     | architecture information:
[2026-01-09 03:17:25] 2026-01-09 08:16:17,607 | INFO     | executing command: cat /etc/os-release
[2026-01-09 03:17:25] 2026-01-09 08:16:17,730 | INFO     | cat /etc/os-release:
[2026-01-09 03:17:25] NAME="CentOS Linux"
[2026-01-09 03:17:25] VERSION="7 (Core)"
[2026-01-09 03:17:25] ID="centos"
[2026-01-09 03:17:25] ID_LIKE="rhel fedora"
[2026-01-09 03:17:25] VERSION_ID="7"
[2026-01-09 03:17:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 03:17:25] ANSI_COLOR="0;31"
[2026-01-09 03:17:25] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 03:17:25] HOME_URL="https://www.centos.org/"
[2026-01-09 03:17:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 03:17:25] 
[2026-01-09 03:17:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 03:17:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 03:17:25] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 03:17:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 03:17:25] 
[2026-01-09 03:17:25] 2026-01-09 08:16:17,730 | INFO     | ***************************************
[2026-01-09 03:17:25] 2026-01-09 08:16:18,233 | INFO     | executing command: df -mP /tmp/boinchome/slots/9
[2026-01-09 03:17:25] 2026-01-09 08:16:18,285 | INFO     | sufficient remaining disk space (72963063808 B)
[2026-01-09 03:17:25] 2026-01-09 08:16:18,285 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 03:17:25] 2026-01-09 08:16:18,285 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 03:17:25] 2026-01-09 08:16:18,285 | INFO     | update_server=False
[2026-01-09 03:17:25] 2026-01-09 08:16:18,285 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 03:17:25] 2026-01-09 08:16:18,286 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 03:17:25] 2026-01-09 08:16:18,287 | INFO     | aborting loop
[2026-01-09 03:17:25] 2026-01-09 08:16:18,624 | INFO     | all payload control threads have been joined
[2026-01-09 03:17:25] 2026-01-09 08:16:18,827 | INFO     | all job control threads have been joined
[2026-01-09 03:17:25] 2026-01-09 08:16:19,156 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 03:17:25] 2026-01-09 08:16:19,291 | INFO     | [job] retrieve thread has finished
[2026-01-09 03:17:25] 2026-01-09 08:16:19,292 | INFO     | [job] job monitor thread has finished
[2026-01-09 03:17:25] 2026-01-09 08:16:19,330 | INFO     | all data control threads have been joined
[2026-01-09 03:17:25] 2026-01-09 08:16:19,377 | INFO     | [payload] validate_post thread has finished
[2026-01-09 03:17:25] 2026-01-09 08:16:19,599 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 03:17:25] 2026-01-09 08:16:19,630 | INFO     | [payload] control thread has finished
[2026-01-09 03:17:25] 2026-01-09 08:16:19,752 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 03:17:25] 2026-01-09 08:16:19,833 | INFO     | [job] control thread has finished
[2026-01-09 03:17:25] 2026-01-09 08:16:19,881 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 03:17:25] 2026-01-09 08:16:19,906 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 03:17:25] 2026-01-09 08:16:20,149 | INFO     | [job] validate thread has finished
[2026-01-09 03:17:25] 2026-01-09 08:16:20,319 | INFO     | [payload] failed_post thread has finished
[2026-01-09 03:17:25] 2026-01-09 08:16:20,336 | INFO     | [data] control thread has finished
[2026-01-09 03:17:25] 2026-01-09 08:16:20,386 | INFO     | [data] copytool_in thread has finished
[2026-01-09 03:17:25] 2026-01-09 08:16:20,763 | INFO     | [job] queue monitor thread has finished
[2026-01-09 03:17:25] 2026-01-09 08:16:21,163 | INFO     | [data] copytool_out thread has finished
[2026-01-09 03:17:25] 2026-01-09 08:16:21,197 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 03:17:25] 2026-01-09 08:16:25,206 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 03:17:25] 2026-01-09 08:16:28,878 | INFO     | job.realtimelogging is not enabled
[2026-01-09 03:17:25] 2026-01-09 08:16:29,884 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 03:17:25] 2026-01-09 08:16:48,696 | INFO     | PID=3537870 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 03:17:25] 2026-01-09 08:16:48,697 | INFO     | .. there are 34 such processes running
[2026-01-09 03:17:25] 2026-01-09 08:16:48,697 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 03:17:25] 2026-01-09 08:16:48,697 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 03:17:25] 2026-01-09 08:16:48,697 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 03:17:25] 2026-01-09 08:17:17,826 | INFO     | [monitor] cgroup control has ended
[2026-01-09 03:17:25] 2026-01-09 08:17:19,605 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139818649843520)>', '<ExcThread(monitor, started 139817492936448)>']
[2026-01-09 03:17:25] 2026-01-09 08:17:19,919 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 03:17:25] 2026-01-09 08:17:19,919 | INFO     | [monitor] control thread has ended
[2026-01-09 03:17:25] 2026-01-09 08:17:24,631 | INFO     | all workflow threads have been joined
[2026-01-09 03:17:25] 2026-01-09 08:17:24,631 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 03:17:25] 2026-01-09 08:17:24,632 | INFO     | traces error code: 0
[2026-01-09 03:17:25] 2026-01-09 08:17:24,632 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 03:17:25] 2026-01-09 08:17:24,947 [wrapper] ==== pilot stdout END ====
[2026-01-09 03:17:25] 2026-01-09 08:17:24,970 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 03:17:25] 2026-01-09 08:17:25,006 [wrapper] pilotpid: 3537870
[2026-01-09 03:17:25] 2026-01-09 08:17:25,034 [wrapper] Pilot exit status: 0
[2026-01-09 03:17:25] 2026-01-09 08:17:25,143 [wrapper] pandaids: 6963152192
[2026-01-09 03:17:25] 2026-01-09 08:17:25,259 [wrapper] cleanup supervisor_pilot  829990 3537871
[2026-01-09 03:17:25] 2026-01-09 08:17:25,290 [wrapper] Test setup, not cleaning
[2026-01-09 03:17:25] 2026-01-09 08:17:25,368 [wrapper] apfmon messages muted
[2026-01-09 03:17:25] 2026-01-09 08:17:25,389 [wrapper] ==== wrapper stdout END ====
[2026-01-09 03:17:25] 2026-01-09 08:17:25,418 [wrapper] ==== wrapper stderr END ====
[2026-01-09 03:17:25]  *** Error codes and diagnostics ***
[2026-01-09 03:17:25]     "exeErrorCode": 0,
[2026-01-09 03:17:25]     "exeErrorDiag": "",
[2026-01-09 03:17:25]     "pilotErrorCode": 0,
[2026-01-09 03:17:25]     "pilotErrorDiag": "",
[2026-01-09 03:17:25]  *** Listing of results directory ***
[2026-01-09 03:17:25] total 441540
[2026-01-09 03:17:25] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 11:02 pilot3.tar.gz
[2026-01-09 03:17:25] -rwx------. 1 boincer umatlas     36322 Jan  8 11:05 runpilot2-wrapper.sh
[2026-01-09 03:17:25] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 11:09 queuedata.json
[2026-01-09 03:17:25] -rw-r--r--. 1 boincer umatlas       100 Jan  9 00:01 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 03:17:25] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 00:01 run_atlas
[2026-01-09 03:17:25] -rw-r--r--. 1 boincer umatlas       105 Jan  9 00:01 job.xml
[2026-01-09 03:17:25] -rw-r--r--. 2 boincer umatlas 224053182 Jan  9 00:01 EVNT.47898824._001135.pool.root.1
[2026-01-09 03:17:25] -rw-r--r--. 2 boincer umatlas    592396 Jan  9 00:01 input.tar.gz
[2026-01-09 03:17:25] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 00:01 start_atlas.sh
[2026-01-09 03:17:25] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 00:01 shared
[2026-01-09 03:17:25] -rw-r--r--. 1 boincer umatlas         0 Jan  9 00:01 boinc_lockfile
[2026-01-09 03:17:25] -rw-r--r--. 1 boincer umatlas      2520 Jan  9 00:01 pandaJob.out
[2026-01-09 03:17:25] -rw-------. 1 boincer umatlas        57 Jan  9 00:01 setup.sh.local
[2026-01-09 03:17:25] -rw-------. 1 boincer umatlas    989771 Jan  9 00:02 agis_schedconf.cvmfs.json
[2026-01-09 03:17:25] drwx------. 5 boincer umatlas      4096 Jan  9 00:02 pilot3
[2026-01-09 03:17:25] -rw-r--r--. 1 boincer umatlas      7172 Jan  9 03:12 init_data.xml
[2026-01-09 03:17:25] -rw-------. 1 boincer umatlas 220286086 Jan  9 03:14 HITS.47898826._028993.pool.root.1
[2026-01-09 03:17:25] -rw-r--r--. 1 boincer umatlas       530 Jan  9 03:14 boinc_task_state.xml
[2026-01-09 03:17:25] -rw-------. 1 boincer umatlas      1036 Jan  9 03:15 memory_monitor_summary.json
[2026-01-09 03:17:25] -rw-------. 1 boincer umatlas   1516240 Jan  9 03:15 agis_ddmendpoints.agis.ALL.json
[2026-01-09 03:17:25] -rw-------. 1 boincer umatlas    487522 Jan  9 03:15 log.47898826._028993.job.log.tgz.1
[2026-01-09 03:17:25] -rw-------. 1 boincer umatlas        95 Jan  9 03:15 pilot_heartbeat.json
[2026-01-09 03:17:25] -rw-------. 1 boincer umatlas      7778 Jan  9 03:16 heartbeat.json
[2026-01-09 03:17:25] -rw-r--r--. 1 boincer umatlas      8192 Jan  9 03:17 boinc_mmap_file
[2026-01-09 03:17:25] -rw-------. 1 boincer umatlas      4896 Jan  9 03:17 pilotlog.txt
[2026-01-09 03:17:25] -rw-r--r--. 1 boincer umatlas        28 Jan  9 03:17 wrapper_checkpoint.txt
[2026-01-09 03:17:25] -rw-------. 1 boincer umatlas   1450535 Jan  9 03:17 log.47898826._028993.job.log.1
[2026-01-09 03:17:25] -rw-------. 1 boincer umatlas       357 Jan  9 03:17 output.list
[2026-01-09 03:17:25] -rw-r--r--. 1 boincer umatlas       620 Jan  9 03:17 runtime_log
[2026-01-09 03:17:25] -rw-------. 1 boincer umatlas   1955840 Jan  9 03:17 result.tar.gz
[2026-01-09 03:17:25] -rw-r--r--. 1 boincer umatlas      9340 Jan  9 03:17 runtime_log.err
[2026-01-09 03:17:25] -rw-------. 1 boincer umatlas       654 Jan  9 03:17 cmGLDmQh7x8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmN3kKDmAF03om.diag
[2026-01-09 03:17:25] -rw-r--r--. 1 boincer umatlas     21440 Jan  9 03:17 stderr.txt
[2026-01-09 03:17:25] HITS file was successfully produced:
[2026-01-09 03:17:25] -rw-------. 1 boincer umatlas 220286086 Jan  9 03:14 shared/HITS.pool.root.1
[2026-01-09 03:17:25]  *** Contents of shared directory: ***
[2026-01-09 03:17:25] total 436444
[2026-01-09 03:17:25] -rw-r--r--. 2 boincer umatlas 224053182 Jan  9 00:01 ATLAS.root_0
[2026-01-09 03:17:25] -rw-r--r--. 2 boincer umatlas    592396 Jan  9 00:01 input.tar.gz
[2026-01-09 03:17:25] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 00:01 start_atlas.sh
[2026-01-09 03:17:25] -rw-------. 1 boincer umatlas 220286086 Jan  9 03:14 HITS.pool.root.1
[2026-01-09 03:17:25] -rw-------. 1 boincer umatlas   1955840 Jan  9 03:17 result.tar.gz
03:17:26 (3520126): run_atlas exited; CPU time 32517.534833
03:17:26 (3520126): called boinc_finish(0)

</stderr_txt>
]]>

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