Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:02:22 (2183490): wrapper (7.7.26015): starting
00:02:22 (2183490): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 00:02:22] Arguments: --nthreads 8
[2026-01-09 00:02:22] Threads: 8
[2026-01-09 00:02:22] Checking for CVMFS
[2026-01-09 00:02:23] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 00:02:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 00:02:24] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 00:02:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 00:02:27] 2.13.3.0 9828 92919 344364 154931 1 500 24385255 32935936 24694 16776704 0 408678854 99.706 316759316 33174 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-09 00:02:27] CVMFS is ok
[2026-01-09 00:02:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 00:02:27] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 00:02:27] Further information can be found at the LHC@home message board.
[2026-01-09 00:02:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 00:02:27] Checking for apptainer binary...
[2026-01-09 00:02:27] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 00:02:27] Running /usr/bin/apptainer --version
[2026-01-09 00:02:29] apptainer version 1.4.5-2.el9
[2026-01-09 00:02:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 00:02:31] c-4-39.aglt2.org
[2026-01-09 00:02:31] apptainer works
[2026-01-09 00:02:31] Set ATHENA_PROC_NUMBER=8
[2026-01-09 00:02:31] Set ATHENA_CORE_NUMBER=8
[2026-01-09 00:02:31] Starting ATLAS job with PandaID=6963151574
[2026-01-09 00:02:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 07:58:17]  *** The last 200 lines of the pilot log: ***
[2026-01-10 07:58:17] 2026-01-10 12:57:18,713 | INFO     | monitor loop #4518: job 0:6963151574 is in state 'finished'
[2026-01-10 07:58:17] 2026-01-10 12:57:18,714 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 07:58:17] 2026-01-10 12:57:18,952 | INFO     | sum of deviations: 2627479432719.5903
[2026-01-10 07:58:17] 2026-01-10 12:57:18,952 | INFO     | mean x: 1767992573.3438165
[2026-01-10 07:58:17] 2026-01-10 12:57:18,952 | INFO     | mean y: 2503276.7835820895
[2026-01-10 07:58:17] 2026-01-10 12:57:18,952 | INFO     | intersect: -2266627991.963751
[2026-01-10 07:58:17] 2026-01-10 12:57:18,955 | INFO     | chi2: 8.122603656521504
[2026-01-10 07:58:17] 2026-01-10 12:57:18,957 | INFO     | sum of square deviations: 2030874527614.1921
[2026-01-10 07:58:17] 2026-01-10 12:57:19,169 | INFO     | sum of deviations: 2732475074923.8174
[2026-01-10 07:58:17] 2026-01-10 12:57:19,169 | INFO     | mean x: 1767992420.848744
[2026-01-10 07:58:17] 2026-01-10 12:57:19,169 | INFO     | mean y: 2504255.179583111
[2026-01-10 07:58:17] 2026-01-10 12:57:19,169 | INFO     | intersect: -2376271566.238944
[2026-01-10 07:58:17] 2026-01-10 12:57:19,172 | INFO     | chi2: 7.446474492743517
[2026-01-10 07:58:17] 2026-01-10 12:57:19,172 | INFO     | current chi2=7.446474492743517 (change=8.32404475669736 %)
[2026-01-10 07:58:17] 2026-01-10 12:57:19,172 | INFO     | right removable region: 1870
[2026-01-10 07:58:17] 2026-01-10 12:57:19,183 | INFO     | sum of square deviations: 2030872760574.2815
[2026-01-10 07:58:17] 2026-01-10 12:57:19,611 | INFO     | sum of deviations: 1987564872954.5273
[2026-01-10 07:58:17] 2026-01-10 12:57:19,612 | INFO     | mean x: 1767992725.8471406
[2026-01-10 07:58:17] 2026-01-10 12:57:19,612 | INFO     | mean y: 2509253.2570817745
[2026-01-10 07:58:17] 2026-01-10 12:57:19,612 | INFO     | intersect: -1727781440.3554647
[2026-01-10 07:58:17] 2026-01-10 12:57:19,670 | INFO     | chi2: 4.032690944408511
[2026-01-10 07:58:17] 2026-01-10 12:57:19,670 | INFO     | current chi2=4.032690944408511 (change=50.35223784222526 %)
[2026-01-10 07:58:17] 2026-01-10 12:57:19,674 | INFO     | sum of square deviations: 2014633053527.0745
[2026-01-10 07:58:17] 2026-01-10 12:57:20,016 | INFO     | sum of deviations: 1512094780770.7131
[2026-01-10 07:58:17] 2026-01-10 12:57:20,017 | INFO     | mean x: 1767992878.3510182
[2026-01-10 07:58:17] 2026-01-10 12:57:20,017 | INFO     | mean y: 2513717.7561629154
[2026-01-10 07:58:17] 2026-01-10 12:57:20,017 | INFO     | intersect: -1324463817.48978
[2026-01-10 07:58:17] 2026-01-10 12:57:20,032 | INFO     | chi2: 1.8285770152703937
[2026-01-10 07:58:17] 2026-01-10 12:57:20,032 | INFO     | current chi2=1.8285770152703937 (change=54.65615787379418 %)
[2026-01-10 07:58:17] 2026-01-10 12:57:20,034 | INFO     | sum of square deviations: 1998480594355.6597
[2026-01-10 07:58:17] 2026-01-10 12:57:20,284 | INFO     | sum of deviations: 1272995746803.763
[2026-01-10 07:58:17] 2026-01-10 12:57:20,284 | INFO     | mean x: 1767993030.8527672
[2026-01-10 07:58:17] 2026-01-10 12:57:20,285 | INFO     | mean y: 2515974.531972058
[2026-01-10 07:58:17] 2026-01-10 12:57:20,285 | INFO     | intersect: -1123663391.4377582
[2026-01-10 07:58:17] 2026-01-10 12:57:20,287 | INFO     | chi2: 1.2635946326701821
[2026-01-10 07:58:17] 2026-01-10 12:57:20,287 | INFO     | current chi2=1.2635946326701821 (change=30.89737964997154 %)
[2026-01-10 07:58:17] 2026-01-10 12:57:20,290 | INFO     | sum of square deviations: 1982414580939.013
[2026-01-10 07:58:17] 2026-01-10 12:57:20,574 | INFO     | sum of deviations: 1120166534839.262
[2026-01-10 07:58:17] 2026-01-10 12:57:20,574 | INFO     | mean x: 1767993183.3550646
[2026-01-10 07:58:17] 2026-01-10 12:57:20,615 | INFO     | mean y: 2517425.067887931
[2026-01-10 07:58:17] 2026-01-10 12:57:20,616 | INFO     | intersect: -996489955.5579133
[2026-01-10 07:58:17] 2026-01-10 12:57:20,627 | INFO     | chi2: 1.0552660161437535
[2026-01-10 07:58:17] 2026-01-10 12:57:20,628 | INFO     | current chi2=1.0552660161437535 (change=16.48698175349132 %)
[2026-01-10 07:58:17] 2026-01-10 12:57:20,628 | INFO     | left removable region: 40
[2026-01-10 07:58:17] 2026-01-10 12:57:20,630 | INFO     | sum of square deviations: 1900260167587.2336
[2026-01-10 07:58:17] 2026-01-10 12:57:20,901 | INFO     | sum of deviations: 856524131868.6873
[2026-01-10 07:58:17] 2026-01-10 12:57:20,901 | INFO     | mean x: 1767993610.367213
[2026-01-10 07:58:17] 2026-01-10 12:57:20,901 | INFO     | mean y: 2522024.4781420766
[2026-01-10 07:58:17] 2026-01-10 12:57:20,901 | INFO     | intersect: -794384219.2557945
[2026-01-10 07:58:17] 2026-01-10 12:57:20,909 | INFO     | chi2: 0.07698586316774259
[2026-01-10 07:58:17] 2026-01-10 12:57:20,934 | INFO     | current memory leak: 0.45 B/s (using 1830 data points, chi2=0.08)
[2026-01-10 07:58:17] 2026-01-10 12:57:20,935 | INFO     | could have reported an average CPU frequency of 2600 MHz (65 samples)
[2026-01-10 07:58:17] 2026-01-10 12:57:20,936 | INFO     | ..............................
[2026-01-10 07:58:17] 2026-01-10 12:57:20,936 | INFO     | . Timing measurements:
[2026-01-10 07:58:17] 2026-01-10 12:57:20,936 | INFO     | . get job = 0 s
[2026-01-10 07:58:17] 2026-01-10 12:57:20,936 | INFO     | . initial setup = 12 s
[2026-01-10 07:58:17] 2026-01-10 12:57:20,936 | INFO     | . payload setup = 90 s
[2026-01-10 07:58:17] 2026-01-10 12:57:20,936 | INFO     | . stage-in = 0 s
[2026-01-10 07:58:17] 2026-01-10 12:57:20,936 | INFO     | . payload execution = 114491 s
[2026-01-10 07:58:17] 2026-01-10 12:57:20,936 | INFO     | . stage-out = 4 s
[2026-01-10 07:58:17] 2026-01-10 12:57:20,937 | INFO     | . log creation = 1 s
[2026-01-10 07:58:17] 2026-01-10 12:57:20,937 | INFO     | ..............................
[2026-01-10 07:58:17] 2026-01-10 12:57:21,515 | INFO     | 
[2026-01-10 07:58:17] 2026-01-10 12:57:21,516 | INFO     | job summary report
[2026-01-10 07:58:17] 2026-01-10 12:57:21,516 | INFO     | --------------------------------------------------
[2026-01-10 07:58:17] 2026-01-10 12:57:21,516 | INFO     | PanDA job id: 6963151574
[2026-01-10 07:58:17] 2026-01-10 12:57:21,516 | INFO     | task id: 47898826
[2026-01-10 07:58:17] 2026-01-10 12:57:21,516 | INFO     | errors: (none)
[2026-01-10 07:58:17] 2026-01-10 12:57:21,516 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 07:58:17] 2026-01-10 12:57:21,516 | INFO     | pilot state: finished 
[2026-01-10 07:58:17] 2026-01-10 12:57:21,516 | INFO     | transexitcode: 0
[2026-01-10 07:58:17] 2026-01-10 12:57:21,517 | INFO     | exeerrorcode: 0
[2026-01-10 07:58:17] 2026-01-10 12:57:21,517 | INFO     | exeerrordiag: 
[2026-01-10 07:58:17] 2026-01-10 12:57:21,517 | INFO     | exitcode: 0
[2026-01-10 07:58:17] 2026-01-10 12:57:21,517 | INFO     | exitmsg: OK
[2026-01-10 07:58:17] 2026-01-10 12:57:21,517 | INFO     | cpuconsumptiontime: 75638 s
[2026-01-10 07:58:17] 2026-01-10 12:57:21,517 | INFO     | nevents: 400
[2026-01-10 07:58:17] 2026-01-10 12:57:21,517 | INFO     | neventsw: 0
[2026-01-10 07:58:17] 2026-01-10 12:57:21,517 | INFO     | pid: 2237885
[2026-01-10 07:58:17] 2026-01-10 12:57:21,518 | INFO     | pgrp: 2237885
[2026-01-10 07:58:17] 2026-01-10 12:57:21,518 | INFO     | corecount: 8
[2026-01-10 07:58:17] 2026-01-10 12:57:21,518 | INFO     | event service: False
[2026-01-10 07:58:17] 2026-01-10 12:57:21,518 | INFO     | sizes: {0: 2283143, 1: 2283744, 2: 2283828, 4: 2283856, 5: 2284111, 17: 2284111, 28: 2284267, 40: 2284295, 53: 2284323, 65: 2284351, 73: 2284641, 77: 2284949, 1145
[2026-01-10 07:58:17] 2026-01-10 12:57:21,518 | INFO     | --------------------------------------------------
[2026-01-10 07:58:17] 2026-01-10 12:57:21,518 | INFO     | 
[2026-01-10 07:58:17] 2026-01-10 12:57:21,518 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2026-01-10 07:58:17] 2026-01-10 12:57:21,617 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 07:58:17] 2026-01-10 12:57:21,617 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 07:58:17] 2026-01-10 12:57:21,617 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 07:58:17] 2026-01-10 12:57:21,617 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 07:58:17] 2026-01-10 12:57:21,618 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 07:58:17] 2026-01-10 12:57:21,618 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 07:58:17] 2026-01-10 12:57:21,618 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 07:58:17] 2026-01-10 12:57:21,618 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 07:58:17] 2026-01-10 12:57:21,618 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 07:58:17] 2026-01-10 12:57:21,618 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 07:58:17] 2026-01-10 12:57:21,618 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 07:58:17] 2026-01-10 12:57:21,619 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 07:58:17] 2026-01-10 12:57:21,619 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 07:58:17] 2026-01-10 12:57:21,619 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 07:58:17] 2026-01-10 12:57:21,619 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 07:58:17] 2026-01-10 12:57:21,619 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 07:58:17] 2026-01-10 12:57:21,619 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 07:58:17] 2026-01-10 12:57:21,619 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 07:58:17] 2026-01-10 12:57:21,619 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 07:58:17] 2026-01-10 12:57:21,620 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 07:58:17] 2026-01-10 12:57:21,620 | INFO     | job 6963151574 has completed (purged errors)
[2026-01-10 07:58:17] 2026-01-10 12:57:21,620 | INFO     | overall cleanup function is called
[2026-01-10 07:58:17] 2026-01-10 12:57:21,949 | INFO     | PID=2207746 has CPU usage=7.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 07:58:17] 2026-01-10 12:57:21,949 | INFO     | .. there are 24 such processes running
[2026-01-10 07:58:17] 2026-01-10 12:57:22,635 | INFO     | --- collectZombieJob: --- 10, [2237885]
[2026-01-10 07:58:17] 2026-01-10 12:57:22,636 | INFO     | zombie collector waiting for pid 2237885
[2026-01-10 07:58:17] 2026-01-10 12:57:22,636 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 07:58:17] 2026-01-10 12:57:22,636 | INFO     | collected zombie processes
[2026-01-10 07:58:17] 2026-01-10 12:57:22,636 | INFO     | will attempt to kill all subprocesses of pid=2237885
[2026-01-10 07:58:17] 2026-01-10 12:57:23,156 | INFO     | process IDs to be killed: [2237885] (in reverse order)
[2026-01-10 07:58:17] 2026-01-10 12:57:23,326 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 07:58:17] 2026-01-10 12:57:23,327 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 07:58:17] 2026-01-10 12:57:23,379 | INFO     | did not find any defunct processes belonging to 2237885
[2026-01-10 07:58:17] 2026-01-10 12:57:23,434 | INFO     | did not find any defunct processes belonging to 2237885
[2026-01-10 07:58:17] 2026-01-10 12:57:23,434 | INFO     | ready for new job
[2026-01-10 07:58:17] 2026-01-10 12:57:23,444 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 07:58:17] 2026-01-10 12:57:23,451 | INFO     | ***************************************
[2026-01-10 07:58:17] 2026-01-10 12:57:23,452 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 07:58:17] 2026-01-10 12:57:23,452 | INFO     | ***************************************
[2026-01-10 07:58:17] 2026-01-10 12:57:23,452 | INFO     | 
[2026-01-10 07:58:17] 2026-01-10 12:57:23,461 | INFO     | architecture information:
[2026-01-10 07:58:17] 2026-01-10 12:57:23,465 | INFO     | executing command: cat /etc/os-release
[2026-01-10 07:58:17] 2026-01-10 12:57:23,608 | INFO     | cat /etc/os-release:
[2026-01-10 07:58:17] NAME="CentOS Linux"
[2026-01-10 07:58:17] VERSION="7 (Core)"
[2026-01-10 07:58:17] ID="centos"
[2026-01-10 07:58:17] ID_LIKE="rhel fedora"
[2026-01-10 07:58:17] VERSION_ID="7"
[2026-01-10 07:58:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 07:58:17] ANSI_COLOR="0;31"
[2026-01-10 07:58:17] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 07:58:17] HOME_URL="https://www.centos.org/"
[2026-01-10 07:58:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 07:58:17] 
[2026-01-10 07:58:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 07:58:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 07:58:17] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 07:58:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 07:58:17] 
[2026-01-10 07:58:17] 2026-01-10 12:57:23,608 | INFO     | ***************************************
[2026-01-10 07:58:17] 2026-01-10 12:57:24,112 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2026-01-10 07:58:17] 2026-01-10 12:57:24,154 | INFO     | sufficient remaining disk space (76238815232 B)
[2026-01-10 07:58:17] 2026-01-10 12:57:24,154 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 07:58:17] 2026-01-10 12:57:24,154 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 07:58:17] 2026-01-10 12:57:24,155 | INFO     | update_server=False
[2026-01-10 07:58:17] 2026-01-10 12:57:24,155 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 07:58:17] 2026-01-10 12:57:24,155 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 07:58:17] 2026-01-10 12:57:24,159 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 07:58:17] 2026-01-10 12:57:24,613 | INFO     | all data control threads have been joined
[2026-01-10 07:58:17] 2026-01-10 12:57:24,785 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 07:58:17] 2026-01-10 12:57:24,786 | INFO     | aborting loop
[2026-01-10 07:58:17] 2026-01-10 12:57:24,836 | INFO     | all job control threads have been joined
[2026-01-10 07:58:17] 2026-01-10 12:57:25,001 | INFO     | all payload control threads have been joined
[2026-01-10 07:58:17] 2026-01-10 12:57:25,160 | INFO     | [job] retrieve thread has finished
[2026-01-10 07:58:17] 2026-01-10 12:57:25,400 | INFO     | [payload] failed_post thread has finished
[2026-01-10 07:58:17] 2026-01-10 12:57:25,619 | INFO     | [data] control thread has finished
[2026-01-10 07:58:17] 2026-01-10 12:57:25,663 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 07:58:17] 2026-01-10 12:57:25,792 | INFO     | [job] job monitor thread has finished
[2026-01-10 07:58:17] 2026-01-10 12:57:25,842 | INFO     | [job] control thread has finished
[2026-01-10 07:58:17] 2026-01-10 12:57:25,953 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 07:58:17] 2026-01-10 12:57:26,007 | INFO     | [payload] control thread has finished
[2026-01-10 07:58:17] 2026-01-10 12:57:26,041 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 07:58:17] 2026-01-10 12:57:26,126 | INFO     | [job] validate thread has finished
[2026-01-10 07:58:17] 2026-01-10 12:57:26,171 | INFO     | [data] copytool_out thread has finished
[2026-01-10 07:58:17] 2026-01-10 12:57:26,363 | INFO     | [data] copytool_in thread has finished
[2026-01-10 07:58:17] 2026-01-10 12:57:26,427 | INFO     | [payload] validate_post thread has finished
[2026-01-10 07:58:17] 2026-01-10 12:57:26,529 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 07:58:17] 2026-01-10 12:57:27,535 | INFO     | [job] queue monitor thread has finished
[2026-01-10 07:58:17] 2026-01-10 12:57:28,164 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 07:58:17] 2026-01-10 12:57:34,682 | INFO     | job.realtimelogging is not enabled
[2026-01-10 07:58:17] 2026-01-10 12:57:35,689 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 07:58:17] 2026-01-10 12:57:55,413 | INFO     | PID=2207746 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 07:58:17] 2026-01-10 12:57:55,413 | INFO     | .. there are 24 such processes running
[2026-01-10 07:58:17] 2026-01-10 12:57:55,414 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 07:58:17] 2026-01-10 12:57:55,415 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 07:58:17] 2026-01-10 12:57:55,415 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 07:58:17] 2026-01-10 12:58:10,775 | INFO     | [monitor] cgroup control has ended
[2026-01-10 07:58:17] 2026-01-10 12:58:11,020 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140518200608576)>', '<ExcThread(monitor, started 140517429995264)>']
[2026-01-10 07:58:17] 2026-01-10 12:58:11,511 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 07:58:17] 2026-01-10 12:58:11,512 | INFO     | [monitor] control thread has ended
[2026-01-10 07:58:17] 2026-01-10 12:58:16,047 | INFO     | all workflow threads have been joined
[2026-01-10 07:58:17] 2026-01-10 12:58:16,048 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 07:58:17] 2026-01-10 12:58:16,049 | INFO     | traces error code: 0
[2026-01-10 07:58:17] 2026-01-10 12:58:16,049 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 07:58:17] 2026-01-10 12:58:16,389 [wrapper] ==== pilot stdout END ====
[2026-01-10 07:58:17] 2026-01-10 12:58:16,411 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 07:58:17] 2026-01-10 12:58:16,426 [wrapper] pilotpid: 2207746
[2026-01-10 07:58:17] 2026-01-10 12:58:16,446 [wrapper] Pilot exit status: 0
[2026-01-10 07:58:17] 2026-01-10 12:58:16,599 [wrapper] pandaids: 6963151574
[2026-01-10 07:58:17] 2026-01-10 12:58:17,034 [wrapper] cleanup supervisor_pilot 3314044 2207747
[2026-01-10 07:58:17] 2026-01-10 12:58:17,037 [wrapper] Test setup, not cleaning
[2026-01-10 07:58:17] 2026-01-10 12:58:17,052 [wrapper] apfmon messages muted
[2026-01-10 07:58:17] 2026-01-10 12:58:17,084 [wrapper] ==== wrapper stdout END ====
[2026-01-10 07:58:17] 2026-01-10 12:58:17,133 [wrapper] ==== wrapper stderr END ====
[2026-01-10 07:58:17]  *** Error codes and diagnostics ***
[2026-01-10 07:58:17]     "exeErrorCode": 0,
[2026-01-10 07:58:17]     "exeErrorDiag": "",
[2026-01-10 07:58:17]     "pilotErrorCode": 0,
[2026-01-10 07:58:17]     "pilotErrorDiag": "",
[2026-01-10 07:58:17]  *** Listing of results directory ***
[2026-01-10 07:58:17] total 468168
[2026-01-10 07:58:17] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 11:02 pilot3.tar.gz
[2026-01-10 07:58:17] -rwx------. 1 boincer umatlas     36322 Jan  8 11:05 runpilot2-wrapper.sh
[2026-01-10 07:58:17] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 11:07 queuedata.json
[2026-01-10 07:58:17] -rw-r--r--. 1 boincer umatlas       100 Jan  9 00:02 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 07:58:17] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 00:02 run_atlas
[2026-01-10 07:58:17] -rw-r--r--. 1 boincer umatlas       105 Jan  9 00:02 job.xml
[2026-01-10 07:58:17] -rw-r--r--. 2 boincer umatlas 225942263 Jan  9 00:02 EVNT.47898824._001096.pool.root.1
[2026-01-10 07:58:17] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 00:02 start_atlas.sh
[2026-01-10 07:58:17] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 00:02 shared
[2026-01-10 07:58:17] -rw-r--r--. 2 boincer umatlas    592401 Jan  9 00:02 input.tar.gz
[2026-01-10 07:58:17] -rw-r--r--. 1 boincer umatlas         0 Jan  9 00:02 boinc_lockfile
[2026-01-10 07:58:17] -rw-r--r--. 1 boincer umatlas      2520 Jan  9 00:02 pandaJob.out
[2026-01-10 07:58:17] -rw-------. 1 boincer umatlas        57 Jan  9 00:02 setup.sh.local
[2026-01-10 07:58:17] -rw-------. 1 boincer umatlas    989771 Jan  9 00:04 agis_schedconf.cvmfs.json
[2026-01-10 07:58:17] drwx------. 5 boincer umatlas      4096 Jan  9 00:04 pilot3
[2026-01-10 07:58:17] -rw-r--r--. 1 boincer umatlas      6658 Jan 10 07:54 init_data.xml
[2026-01-10 07:58:17] -rw-------. 1 boincer umatlas 224536057 Jan 10 07:55 HITS.47898826._028612.pool.root.1
[2026-01-10 07:58:17] -rw-r--r--. 1 boincer umatlas       530 Jan 10 07:55 boinc_task_state.xml
[2026-01-10 07:58:17] -rw-------. 1 boincer umatlas      1055 Jan 10 07:56 memory_monitor_summary.json
[2026-01-10 07:58:17] -rw-------. 1 boincer umatlas   1516240 Jan 10 07:56 agis_ddmendpoints.agis.ALL.json
[2026-01-10 07:58:17] -rw-------. 1 boincer umatlas   1503715 Jan 10 07:56 log.47898826._028612.job.log.tgz.1
[2026-01-10 07:58:17] -rw-------. 1 boincer umatlas      7852 Jan 10 07:57 heartbeat.json
[2026-01-10 07:58:17] -rw-------. 1 boincer umatlas        95 Jan 10 07:57 pilot_heartbeat.json
[2026-01-10 07:58:17] -rw-------. 1 boincer umatlas      4896 Jan 10 07:58 pilotlog.txt
[2026-01-10 07:58:17] -rw-r--r--. 1 boincer umatlas        27 Jan 10 07:58 wrapper_checkpoint.txt
[2026-01-10 07:58:17] -rw-r--r--. 1 boincer umatlas      8192 Jan 10 07:58 boinc_mmap_file
[2026-01-10 07:58:17] -rw-------. 1 boincer umatlas  11000168 Jan 10 07:58 log.47898826._028612.job.log.1
[2026-01-10 07:58:17] -rw-------. 1 boincer umatlas       357 Jan 10 07:58 output.list
[2026-01-10 07:58:17] -rw-r--r--. 1 boincer umatlas       620 Jan 10 07:58 runtime_log
[2026-01-10 07:58:17] -rw-------. 1 boincer umatlas  12523520 Jan 10 07:58 result.tar.gz
[2026-01-10 07:58:17] -rw-r--r--. 1 boincer umatlas      9334 Jan 10 07:58 runtime_log.err
[2026-01-10 07:58:17] -rw-------. 1 boincer umatlas       662 Jan 10 07:58 nErNDmPh7x8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm91kKDm6r1xZn.diag
[2026-01-10 07:58:17] -rw-r--r--. 1 boincer umatlas     21232 Jan 10 07:58 stderr.txt
[2026-01-10 07:58:17] HITS file was successfully produced:
[2026-01-10 07:58:17] -rw-------. 1 boincer umatlas 224536057 Jan 10 07:55 shared/HITS.pool.root.1
[2026-01-10 07:58:17]  *** Contents of shared directory: ***
[2026-01-10 07:58:17] total 452756
[2026-01-10 07:58:17] -rw-r--r--. 2 boincer umatlas 225942263 Jan  9 00:02 ATLAS.root_0
[2026-01-10 07:58:17] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 00:02 start_atlas.sh
[2026-01-10 07:58:17] -rw-r--r--. 2 boincer umatlas    592401 Jan  9 00:02 input.tar.gz
[2026-01-10 07:58:17] -rw-------. 1 boincer umatlas 224536057 Jan 10 07:55 HITS.pool.root.1
[2026-01-10 07:58:17] -rw-------. 1 boincer umatlas  12523520 Jan 10 07:58 result.tar.gz
07:58:19 (2183490): run_atlas exited; CPU time 80283.581064
07:58:19 (2183490): called boinc_finish(0)

</stderr_txt>
]]>

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