Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
05:46:53 (18020): wrapper (7.7.26015): starting
05:46:53 (18020): wrapper: running run_atlas (--nthreads 11)
[2026-01-09 05:46:53] Arguments: --nthreads 11
[2026-01-09 05:46:53] Threads: 11
[2026-01-09 05:46:53] Checking for CVMFS
[2026-01-09 05:46:53] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 05:46:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 05:46:54] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 05:46:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 05:46:54] 2.13.3.0 5782 20660 190772 154940 0 384 32810162 40960000 8493 16776704 0 22492741 99.689 16553390 39553 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-09 05:46:54] CVMFS is ok
[2026-01-09 05:46:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 05:46:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 05:46:54] Further information can be found at the LHC@home message board.
[2026-01-09 05:46:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 05:46:54] Checking for apptainer binary...
[2026-01-09 05:46:54] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 05:46:54] Running /usr/bin/apptainer --version
[2026-01-09 05:46:54] apptainer version 1.4.5-2.el9
[2026-01-09 05:46:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 05:46:54] c-206-39.aglt2.org
[2026-01-09 05:46:54] apptainer works
[2026-01-09 05:46:54] Set ATHENA_PROC_NUMBER=11
[2026-01-09 05:46:54] Set ATHENA_CORE_NUMBER=11
[2026-01-09 05:46:54] Starting ATLAS job with PandaID=6963147758
[2026-01-09 05:46:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 12:34:04]  *** The last 200 lines of the pilot log: ***
[2026-01-09 12:34:04] 2026-01-09 17:32:55,751 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 12:34:04] 2026-01-09 17:32:55,784 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 3239.457
[2026-01-09 12:34:04] 2026-01-09 17:32:55,824 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6963147758/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 12:34:04] 2026-01-09 17:32:55,825 | INFO     | extracted standard info from prmon json
[2026-01-09 12:34:04] 2026-01-09 17:32:55,825 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 12:34:04] 2026-01-09 17:32:55,825 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 12:34:04] 2026-01-09 17:32:55,825 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 12:34:04] 2026-01-09 17:32:55,825 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 12:34:04] 2026-01-09 17:32:55,890 | INFO     | fitting pss+swap vs Time
[2026-01-09 12:34:04] 2026-01-09 17:32:55,890 | INFO     | sum of square deviations: 19550234825.42965
[2026-01-09 12:34:04] 2026-01-09 17:32:55,923 | INFO     | sum of deviations: -56925172875.937195
[2026-01-09 12:34:04] 2026-01-09 17:32:55,923 | INFO     | mean x: 1767967782.937186
[2026-01-09 12:34:04] 2026-01-09 17:32:55,924 | INFO     | mean y: 2645909.002512563
[2026-01-09 12:34:04] 2026-01-09 17:32:55,924 | INFO     | intersect: 5150505900.529491
[2026-01-09 12:34:04] 2026-01-09 17:32:55,924 | INFO     | chi2: 3.603838735365614
[2026-01-09 12:34:04] 2026-01-09 17:32:55,950 | INFO     | sum of square deviations: 18822706996.844707
[2026-01-09 12:34:04] 2026-01-09 17:32:55,953 | INFO     | sum of deviations: 25661188289.251907
[2026-01-09 12:34:04] 2026-01-09 17:32:55,983 | INFO     | mean x: 1767967630.4402037
[2026-01-09 12:34:04] 2026-01-09 17:32:55,983 | INFO     | mean y: 2663136.3511450384
[2026-01-09 12:34:04] 2026-01-09 17:32:55,983 | INFO     | intersect: -2407625153.2999535
[2026-01-09 12:34:04] 2026-01-09 17:32:55,983 | INFO     | chi2: 1.3498373943129054
[2026-01-09 12:34:04] 2026-01-09 17:32:55,984 | INFO     | current chi2=1.3498373943129054 (change=62.54445624698679 %)
[2026-01-09 12:34:04] 2026-01-09 17:32:55,984 | INFO     | sum of square deviations: 18113192906.193497
[2026-01-09 12:34:04] 2026-01-09 17:32:56,019 | INFO     | sum of deviations: 24670269610.546406
[2026-01-09 12:34:04] 2026-01-09 17:32:56,020 | INFO     | mean x: 1767967477.9149485
[2026-01-09 12:34:04] 2026-01-09 17:32:56,020 | INFO     | mean y: 2662923.319587629
[2026-01-09 12:34:04] 2026-01-09 17:32:56,020 | INFO     | intersect: -2405318627.405558
[2026-01-09 12:34:04] 2026-01-09 17:32:56,020 | INFO     | chi2: 1.3498270174273603
[2026-01-09 12:34:04] 2026-01-09 17:32:56,020 | INFO     | current chi2=1.3498270174273603 (change=0.0007687507835225129 %)
[2026-01-09 12:34:04] 2026-01-09 17:32:56,020 | INFO     | right removable region: 387
[2026-01-09 12:34:04] 2026-01-09 17:32:56,021 | INFO     | sum of square deviations: 18822502527.470684
[2026-01-09 12:34:04] 2026-01-09 17:32:56,051 | INFO     | sum of deviations: -103583030125.87025
[2026-01-09 12:34:04] 2026-01-09 17:32:56,052 | INFO     | mean x: 1767967935.4554708
[2026-01-09 12:34:04] 2026-01-09 17:32:56,052 | INFO     | mean y: 2655613.893129771
[2026-01-09 12:34:04] 2026-01-09 17:32:56,052 | INFO     | intersect: 9732046041.790995
[2026-01-09 12:34:04] 2026-01-09 17:32:56,052 | INFO     | chi2: 2.5233066553138412
[2026-01-09 12:34:04] 2026-01-09 17:32:56,052 | INFO     | current chi2=2.5233066553138412 (change=29.982808871223014 %)
[2026-01-09 12:34:04] 2026-01-09 17:32:56,053 | INFO     | sum of square deviations: 18113073494.688118
[2026-01-09 12:34:04] 2026-01-09 17:32:56,087 | INFO     | sum of deviations: -93139852989.27838
[2026-01-09 12:34:04] 2026-01-09 17:32:56,087 | INFO     | mean x: 1767968087.9716494
[2026-01-09 12:34:04] 2026-01-09 17:32:56,087 | INFO     | mean y: 2653352.2474226803
[2026-01-09 12:34:04] 2026-01-09 17:32:56,087 | INFO     | intersect: 9093782356.483288
[2026-01-09 12:34:04] 2026-01-09 17:32:56,087 | INFO     | chi2: 2.4842463739063656
[2026-01-09 12:34:04] 2026-01-09 17:32:56,088 | INFO     | current chi2=2.4842463739063656 (change=1.5479799621349406 %)
[2026-01-09 12:34:04] 2026-01-09 17:32:56,088 | INFO     | left removable region: 20
[2026-01-09 12:34:04] 2026-01-09 17:32:56,088 | INFO     | sum of square deviations: 15327973859.694769
[2026-01-09 12:34:04] 2026-01-09 17:32:56,117 | INFO     | sum of deviations: 28435974415.926434
[2026-01-09 12:34:04] 2026-01-09 17:32:56,117 | INFO     | mean x: 1767968057.4877384
[2026-01-09 12:34:04] 2026-01-09 17:32:56,117 | INFO     | mean y: 2661241.9836512264
[2026-01-09 12:34:04] 2026-01-09 17:32:56,117 | INFO     | intersect: -3277217423.7213283
[2026-01-09 12:34:04] 2026-01-09 17:32:56,117 | INFO     | chi2: 0.0028308754356627833
[2026-01-09 12:34:04] 2026-01-09 17:32:56,118 | INFO     | current memory leak: 1.86 B/s (using 367 data points, chi2=0.00)
[2026-01-09 12:34:04] 2026-01-09 17:32:56,119 | INFO     | could have reported an average CPU frequency of 3242 MHz (17 samples)
[2026-01-09 12:34:04] 2026-01-09 17:32:56,119 | INFO     | ..............................
[2026-01-09 12:34:04] 2026-01-09 17:32:56,119 | INFO     | . Timing measurements:
[2026-01-09 12:34:04] 2026-01-09 17:32:56,119 | INFO     | . get job = 0 s
[2026-01-09 12:34:04] 2026-01-09 17:32:56,119 | INFO     | . initial setup = 2 s
[2026-01-09 12:34:04] 2026-01-09 17:32:56,119 | INFO     | . payload setup = 13 s
[2026-01-09 12:34:04] 2026-01-09 17:32:56,119 | INFO     | . stage-in = 0 s
[2026-01-09 12:34:04] 2026-01-09 17:32:56,119 | INFO     | . payload execution = 24280 s
[2026-01-09 12:34:04] 2026-01-09 17:32:56,120 | INFO     | . stage-out = 5 s
[2026-01-09 12:34:04] 2026-01-09 17:32:56,120 | INFO     | . log creation = 0 s
[2026-01-09 12:34:04] 2026-01-09 17:32:56,120 | INFO     | ..............................
[2026-01-09 12:34:04] 2026-01-09 17:32:56,504 | INFO     | 
[2026-01-09 12:34:04] 2026-01-09 17:32:56,505 | INFO     | job summary report
[2026-01-09 12:34:04] 2026-01-09 17:32:56,505 | INFO     | --------------------------------------------------
[2026-01-09 12:34:04] 2026-01-09 17:32:56,505 | INFO     | PanDA job id: 6963147758
[2026-01-09 12:34:04] 2026-01-09 17:32:56,505 | INFO     | task id: 47898826
[2026-01-09 12:34:04] 2026-01-09 17:32:56,505 | INFO     | errors: (none)
[2026-01-09 12:34:04] 2026-01-09 17:32:56,505 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 12:34:04] 2026-01-09 17:32:56,505 | INFO     | pilot state: finished 
[2026-01-09 12:34:04] 2026-01-09 17:32:56,505 | INFO     | transexitcode: 0
[2026-01-09 12:34:04] 2026-01-09 17:32:56,505 | INFO     | exeerrorcode: 0
[2026-01-09 12:34:04] 2026-01-09 17:32:56,505 | INFO     | exeerrordiag: 
[2026-01-09 12:34:04] 2026-01-09 17:32:56,505 | INFO     | exitcode: 0
[2026-01-09 12:34:04] 2026-01-09 17:32:56,505 | INFO     | exitmsg: OK
[2026-01-09 12:34:04] 2026-01-09 17:32:56,506 | INFO     | cpuconsumptiontime: 47319 s
[2026-01-09 12:34:04] 2026-01-09 17:32:56,506 | INFO     | nevents: 400
[2026-01-09 12:34:04] 2026-01-09 17:32:56,506 | INFO     | neventsw: 0
[2026-01-09 12:34:04] 2026-01-09 17:32:56,506 | INFO     | pid: 28714
[2026-01-09 12:34:04] 2026-01-09 17:32:56,506 | INFO     | pgrp: 28714
[2026-01-09 12:34:04] 2026-01-09 17:32:56,506 | INFO     | corecount: 11
[2026-01-09 12:34:04] 2026-01-09 17:32:56,506 | INFO     | event service: False
[2026-01-09 12:34:04] 2026-01-09 17:32:56,506 | INFO     | sizes: {0: 2283800, 1: 2283999, 11: 2284289, 24298: 2319332, 24299: 2319331, 24304: 2328385, 24305: 2328569, 24325: 2328827}
[2026-01-09 12:34:04] 2026-01-09 17:32:56,506 | INFO     | --------------------------------------------------
[2026-01-09 12:34:04] 2026-01-09 17:32:56,506 | INFO     | 
[2026-01-09 12:34:04] 2026-01-09 17:32:56,506 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-09 12:34:04] 2026-01-09 17:32:56,652 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 12:34:04] 2026-01-09 17:32:56,652 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 12:34:04] 2026-01-09 17:32:56,652 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 12:34:04] 2026-01-09 17:32:56,653 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 12:34:04] 2026-01-09 17:32:56,653 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 12:34:04] 2026-01-09 17:32:56,653 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 12:34:04] 2026-01-09 17:32:56,653 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 12:34:04] 2026-01-09 17:32:56,653 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 12:34:04] 2026-01-09 17:32:56,653 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 12:34:04] 2026-01-09 17:32:56,653 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 12:34:04] 2026-01-09 17:32:56,653 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 12:34:04] 2026-01-09 17:32:56,653 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 12:34:04] 2026-01-09 17:32:56,653 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 12:34:04] 2026-01-09 17:32:56,653 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 12:34:04] 2026-01-09 17:32:56,653 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 12:34:04] 2026-01-09 17:32:56,653 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 12:34:04] 2026-01-09 17:32:56,653 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 12:34:04] 2026-01-09 17:32:56,654 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 12:34:04] 2026-01-09 17:32:56,654 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 12:34:04] 2026-01-09 17:32:56,654 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 12:34:04] 2026-01-09 17:32:56,654 | INFO     | job 6963147758 has completed (purged errors)
[2026-01-09 12:34:04] 2026-01-09 17:32:56,654 | INFO     | overall cleanup function is called
[2026-01-09 12:34:04] 2026-01-09 17:32:57,680 | INFO     | --- collectZombieJob: --- 10, [28714]
[2026-01-09 12:34:04] 2026-01-09 17:32:57,680 | INFO     | zombie collector waiting for pid 28714
[2026-01-09 12:34:04] 2026-01-09 17:32:57,680 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 12:34:04] 2026-01-09 17:32:57,680 | INFO     | collected zombie processes
[2026-01-09 12:34:04] 2026-01-09 17:32:57,680 | INFO     | will attempt to kill all subprocesses of pid=28714
[2026-01-09 12:34:04] 2026-01-09 17:32:59,567 | INFO     | process IDs to be killed: [28714] (in reverse order)
[2026-01-09 12:34:04] 2026-01-09 17:32:59,661 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 12:34:04] 2026-01-09 17:32:59,661 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 12:34:04] 2026-01-09 17:32:59,671 | INFO     | did not find any defunct processes belonging to 28714
[2026-01-09 12:34:04] 2026-01-09 17:32:59,678 | INFO     | did not find any defunct processes belonging to 28714
[2026-01-09 12:34:04] 2026-01-09 17:32:59,678 | INFO     | ready for new job
[2026-01-09 12:34:04] 2026-01-09 17:32:59,678 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 12:34:04] 2026-01-09 17:32:59,681 | INFO     | ***************************************
[2026-01-09 12:34:04] 2026-01-09 17:32:59,681 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 12:34:04] 2026-01-09 17:32:59,681 | INFO     | ***************************************
[2026-01-09 12:34:04] 2026-01-09 17:32:59,681 | INFO     | 
[2026-01-09 12:34:04] 2026-01-09 17:32:59,684 | INFO     | architecture information:
[2026-01-09 12:34:04] 2026-01-09 17:32:59,685 | INFO     | executing command: cat /etc/os-release
[2026-01-09 12:34:04] 2026-01-09 17:32:59,699 | INFO     | cat /etc/os-release:
[2026-01-09 12:34:04] NAME="CentOS Linux"
[2026-01-09 12:34:04] VERSION="7 (Core)"
[2026-01-09 12:34:04] ID="centos"
[2026-01-09 12:34:04] ID_LIKE="rhel fedora"
[2026-01-09 12:34:04] VERSION_ID="7"
[2026-01-09 12:34:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 12:34:04] ANSI_COLOR="0;31"
[2026-01-09 12:34:04] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 12:34:04] HOME_URL="https://www.centos.org/"
[2026-01-09 12:34:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 12:34:04] 
[2026-01-09 12:34:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 12:34:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 12:34:04] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 12:34:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 12:34:04] 
[2026-01-09 12:34:04] 2026-01-09 17:32:59,699 | INFO     | ***************************************
[2026-01-09 12:34:04] 2026-01-09 17:33:00,204 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-09 12:34:04] 2026-01-09 17:33:00,440 | INFO     | sufficient remaining disk space (84273004544 B)
[2026-01-09 12:34:04] 2026-01-09 17:33:00,440 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 12:34:04] 2026-01-09 17:33:00,440 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 12:34:04] 2026-01-09 17:33:00,440 | INFO     | update_server=False
[2026-01-09 12:34:04] 2026-01-09 17:33:00,440 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 12:34:04] 2026-01-09 17:33:00,679 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-09 12:34:04] 2026-01-09 17:33:00,679 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-09 12:34:04] 2026-01-09 17:33:00,679 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 12:34:04] 2026-01-09 17:33:00,679 | INFO     | will abort loop
[2026-01-09 12:34:04] 2026-01-09 17:33:00,796 | INFO     | all data control threads have been joined
[2026-01-09 12:34:04] 2026-01-09 17:33:00,796 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 12:34:04] 2026-01-09 17:33:01,447 | INFO     | [job] retrieve thread has finished
[2026-01-09 12:34:04] 2026-01-09 17:33:01,492 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 12:34:04] 2026-01-09 17:33:01,550 | INFO     | [payload] failed_post thread has finished
[2026-01-09 12:34:04] 2026-01-09 17:33:01,555 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 12:34:04] 2026-01-09 17:33:01,587 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 12:34:04] 2026-01-09 17:33:01,685 | INFO     | [job] job monitor thread has finished
[2026-01-09 12:34:04] 2026-01-09 17:33:01,725 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 12:34:04] 2026-01-09 17:33:01,735 | INFO     | all payload control threads have been joined
[2026-01-09 12:34:04] 2026-01-09 17:33:01,802 | INFO     | [data] control thread has finished
[2026-01-09 12:34:04] 2026-01-09 17:33:01,847 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 12:34:04] 2026-01-09 17:33:01,867 | INFO     | [job] validate thread has finished
[2026-01-09 12:34:04] 2026-01-09 17:33:01,935 | INFO     | all job control threads have been joined
[2026-01-09 12:34:04] 2026-01-09 17:33:02,389 | INFO     | [payload] validate_post thread has finished
[2026-01-09 12:34:04] 2026-01-09 17:33:02,561 | INFO     | [job] queue monitor thread has finished
[2026-01-09 12:34:04] 2026-01-09 17:33:02,741 | INFO     | [payload] control thread has finished
[2026-01-09 12:34:04] 2026-01-09 17:33:02,798 | INFO     | [data] copytool_in thread has finished
[2026-01-09 12:34:04] 2026-01-09 17:33:02,905 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 12:34:04] 2026-01-09 17:33:02,941 | INFO     | [job] control thread has finished
[2026-01-09 12:34:04] 2026-01-09 17:33:03,499 | INFO     | [data] copytool_out thread has finished
[2026-01-09 12:34:04] 2026-01-09 17:33:04,809 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 12:34:04] 2026-01-09 17:33:30,424 | INFO     | PID=22122 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-09 12:34:04] 2026-01-09 17:33:30,424 | INFO     | .. there are 11 such processes running
[2026-01-09 12:34:04] 2026-01-09 17:33:30,481 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 12:34:04] 2026-01-09 17:33:30,481 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 12:34:04] 2026-01-09 17:33:30,481 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 12:34:04] 2026-01-09 17:33:57,648 | INFO     | [monitor] cgroup control has ended
[2026-01-09 12:34:04] 2026-01-09 17:33:58,736 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140157959690048)>', '<ExcThread(monitor, started 140157592266496)>']
[2026-01-09 12:34:04] 2026-01-09 17:33:58,794 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 12:34:04] 2026-01-09 17:33:58,794 | INFO     | [monitor] control thread has ended
[2026-01-09 12:34:04] 2026-01-09 17:34:03,763 | INFO     | all workflow threads have been joined
[2026-01-09 12:34:04] 2026-01-09 17:34:03,763 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 12:34:04] 2026-01-09 17:34:03,763 | INFO     | traces error code: 0
[2026-01-09 12:34:04] 2026-01-09 17:34:03,763 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 12:34:04] 2026-01-09 17:34:04,261 [wrapper] ==== pilot stdout END ====
[2026-01-09 12:34:04] 2026-01-09 17:34:04,265 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 12:34:04] 2026-01-09 17:34:04,267 [wrapper] pilotpid: 22122
[2026-01-09 12:34:04] 2026-01-09 17:34:04,269 [wrapper] Pilot exit status: 0
[2026-01-09 12:34:04] 2026-01-09 17:34:04,315 [wrapper] pandaids: 6963147758
[2026-01-09 12:34:04] 2026-01-09 17:34:04,402 [wrapper] cleanup supervisor_pilot  766757 22123
[2026-01-09 12:34:04] 2026-01-09 17:34:04,441 [wrapper] Test setup, not cleaning
[2026-01-09 12:34:04] 2026-01-09 17:34:04,487 [wrapper] apfmon messages muted
[2026-01-09 12:34:04] 2026-01-09 17:34:04,555 [wrapper] ==== wrapper stdout END ====
[2026-01-09 12:34:04] 2026-01-09 17:34:04,615 [wrapper] ==== wrapper stderr END ====
[2026-01-09 12:34:04]  *** Error codes and diagnostics ***
[2026-01-09 12:34:04]     "exeErrorCode": 0,
[2026-01-09 12:34:04]     "exeErrorDiag": "",
[2026-01-09 12:34:04]     "pilotErrorCode": 0,
[2026-01-09 12:34:04]     "pilotErrorDiag": "",
[2026-01-09 12:34:04]  *** Listing of results directory ***
[2026-01-09 12:34:04] total 448988
[2026-01-09 12:34:04] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 11:02 pilot3.tar.gz
[2026-01-09 12:34:04] -rwx------. 1 boincer umatlas     36322 Jan  8 11:06 runpilot2-wrapper.sh
[2026-01-09 12:34:04] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 11:09 queuedata.json
[2026-01-09 12:34:04] -rw-r--r--. 1 boincer umatlas       100 Jan  9 05:46 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 12:34:04] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 05:46 run_atlas
[2026-01-09 12:34:04] -rw-r--r--. 1 boincer umatlas       105 Jan  9 05:46 job.xml
[2026-01-09 12:34:04] -rw-r--r--. 2 boincer umatlas 228051459 Jan  9 05:46 EVNT.47898824._001083.pool.root.1
[2026-01-09 12:34:04] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 05:46 start_atlas.sh
[2026-01-09 12:34:04] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 05:46 shared
[2026-01-09 12:34:04] -rw-r--r--. 2 boincer umatlas    592399 Jan  9 05:46 input.tar.gz
[2026-01-09 12:34:04] -rw-r--r--. 1 boincer umatlas         0 Jan  9 05:46 boinc_lockfile
[2026-01-09 12:34:04] -rw-r--r--. 1 boincer umatlas      2520 Jan  9 05:46 pandaJob.out
[2026-01-09 12:34:04] -rw-------. 1 boincer umatlas        57 Jan  9 05:46 setup.sh.local
[2026-01-09 12:34:04] -rw-------. 1 boincer umatlas    989369 Jan  9 05:47 agis_schedconf.cvmfs.json
[2026-01-09 12:34:04] drwx------. 5 boincer umatlas      4096 Jan  9 05:47 pilot3
[2026-01-09 12:34:04] -rw-------. 1 boincer umatlas 220478843 Jan  9 12:29 HITS.47898826._027876.pool.root.1
[2026-01-09 12:34:04] -rw-r--r--. 1 boincer umatlas       531 Jan  9 12:29 boinc_task_state.xml
[2026-01-09 12:34:04] -rw-r--r--. 1 boincer umatlas      6906 Jan  9 12:30 init_data.xml
[2026-01-09 12:34:04] -rw-------. 1 boincer umatlas      1032 Jan  9 12:32 memory_monitor_summary.json
[2026-01-09 12:34:04] -rw-------. 1 boincer umatlas   1516240 Jan  9 12:32 agis_ddmendpoints.agis.ALL.json
[2026-01-09 12:34:04] -rw-------. 1 boincer umatlas    614694 Jan  9 12:32 log.47898826._027876.job.log.tgz.1
[2026-01-09 12:34:04] -rw-------. 1 boincer umatlas      7778 Jan  9 12:32 heartbeat.json
[2026-01-09 12:34:04] -rw-------. 1 boincer umatlas        95 Jan  9 12:33 pilot_heartbeat.json
[2026-01-09 12:34:04] -rw-r--r--. 1 boincer umatlas        28 Jan  9 12:33 wrapper_checkpoint.txt
[2026-01-09 12:34:04] -rw-r--r--. 1 boincer umatlas      8192 Jan  9 12:33 boinc_mmap_file
[2026-01-09 12:34:04] -rw-------. 1 boincer umatlas      5008 Jan  9 12:34 pilotlog.txt
[2026-01-09 12:34:04] -rw-------. 1 boincer umatlas   3047179 Jan  9 12:34 log.47898826._027876.job.log.1
[2026-01-09 12:34:04] -rw-------. 1 boincer umatlas       357 Jan  9 12:34 output.list
[2026-01-09 12:34:04] -rw-r--r--. 1 boincer umatlas       620 Jan  9 12:34 runtime_log
[2026-01-09 12:34:04] -rw-------. 1 boincer umatlas   3676160 Jan  9 12:34 result.tar.gz
[2026-01-09 12:34:04] -rw-r--r--. 1 boincer umatlas      9345 Jan  9 12:34 runtime_log.err
[2026-01-09 12:34:04] -rw-------. 1 boincer umatlas       656 Jan  9 12:34 No0LDmyh7x8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmHpfKDmTnetTo.diag
[2026-01-09 12:34:04] -rw-r--r--. 1 boincer umatlas     21160 Jan  9 12:34 stderr.txt
[2026-01-09 12:34:04] HITS file was successfully produced:
[2026-01-09 12:34:04] -rw-------. 1 boincer umatlas 220478843 Jan  9 12:29 shared/HITS.pool.root.1
[2026-01-09 12:34:04]  *** Contents of shared directory: ***
[2026-01-09 12:34:04] total 442212
[2026-01-09 12:34:04] -rw-r--r--. 2 boincer umatlas 228051459 Jan  9 05:46 ATLAS.root_0
[2026-01-09 12:34:04] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 05:46 start_atlas.sh
[2026-01-09 12:34:04] -rw-r--r--. 2 boincer umatlas    592399 Jan  9 05:46 input.tar.gz
[2026-01-09 12:34:04] -rw-------. 1 boincer umatlas 220478843 Jan  9 12:29 HITS.pool.root.1
[2026-01-09 12:34:04] -rw-------. 1 boincer umatlas   3676160 Jan  9 12:34 result.tar.gz
12:34:06 (18020): run_atlas exited; CPU time 47642.502402
12:34:06 (18020): called boinc_finish(0)

</stderr_txt>
]]>

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