Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:04:21 (2067963): wrapper (7.7.26015): starting
00:04:21 (2067963): wrapper: running run_atlas (--nthreads 12)
[2026-01-09 00:04:21] Arguments: --nthreads 12
[2026-01-09 00:04:21] Threads: 12
[2026-01-09 00:04:21] Checking for CVMFS
[2026-01-09 00:04:21] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 00:04:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 00:04:21] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 00:04:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 00:04:22] 2.13.3.0 12004 92920 419892 154931 3 404 32716424 32935937 21609 16776704 0 364162623 99.519 475990602 33695 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-09 00:04:22] CVMFS is ok
[2026-01-09 00:04:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 00:04:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 00:04:22] Further information can be found at the LHC@home message board.
[2026-01-09 00:04:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 00:04:22] Checking for apptainer binary...
[2026-01-09 00:04:22] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 00:04:22] Running /usr/bin/apptainer --version
[2026-01-09 00:04:22] apptainer version 1.4.5-2.el9
[2026-01-09 00:04:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 00:04:22] c6-12-29-4.aglt2.org
[2026-01-09 00:04:22] apptainer works
[2026-01-09 00:04:22] Set ATHENA_PROC_NUMBER=12
[2026-01-09 00:04:22] Set ATHENA_CORE_NUMBER=12
[2026-01-09 00:04:22] Starting ATLAS job with PandaID=6963077038
[2026-01-09 00:04:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 15:27:39]  *** The last 200 lines of the pilot log: ***
[2026-01-09 15:27:39] 2026-01-09 20:26:51,960 | INFO     | time since job start (55332s) is within the limit (174528.0s)
[2026-01-09 15:27:39] 2026-01-09 20:26:52,482 | INFO     | monitor loop #3602: job 0:6963077038 is in state 'finished'
[2026-01-09 15:27:39] 2026-01-09 20:26:52,483 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 15:27:39] 2026-01-09 20:26:53,967 | INFO     | time since job start (55334s) is within the limit (174528.0s)
[2026-01-09 15:27:39] 2026-01-09 20:26:54,987 | INFO     | monitor loop #3603: job 0:6963077038 is in state 'finished'
[2026-01-09 15:27:39] 2026-01-09 20:26:54,988 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 15:27:39] 2026-01-09 20:26:55,974 | INFO     | time since job start (55336s) is within the limit (174528.0s)
[2026-01-09 15:27:39] 2026-01-09 20:26:57,537 | INFO     | monitor loop #3604: job 0:6963077038 is in state 'finished'
[2026-01-09 15:27:39] 2026-01-09 20:26:57,538 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 15:27:39] 2026-01-09 20:26:58,881 | INFO     | PID=2074343 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 15:27:39] 2026-01-09 20:26:58,881 | INFO     | .. there are 17 such processes running
[2026-01-09 15:27:39] 2026-01-09 20:26:59,890 | INFO     | time since job start (55340s) is within the limit (174528.0s)
[2026-01-09 15:27:39] 2026-01-09 20:27:00,043 | INFO     | monitor loop #3605: job 0:6963077038 is in state 'finished'
[2026-01-09 15:27:39] 2026-01-09 20:27:00,044 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 15:27:39] 2026-01-09 20:27:01,916 | INFO     | time since job start (55342s) is within the limit (174528.0s)
[2026-01-09 15:27:39] 2026-01-09 20:27:02,549 | INFO     | monitor loop #3606: job 0:6963077038 is in state 'finished'
[2026-01-09 15:27:39] 2026-01-09 20:27:02,549 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 15:27:39] 2026-01-09 20:27:03,923 | INFO     | time since job start (55344s) is within the limit (174528.0s)
[2026-01-09 15:27:39] 2026-01-09 20:27:03,940 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-09 15:27:39] 2026-01-09 20:27:03,995 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2608.1264374999996
[2026-01-09 15:27:39] 2026-01-09 20:27:04,049 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6963077038/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 15:27:39] 2026-01-09 20:27:04,050 | INFO     | extracted standard info from prmon json
[2026-01-09 15:27:39] 2026-01-09 20:27:04,050 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 15:27:39] 2026-01-09 20:27:04,050 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 15:27:39] 2026-01-09 20:27:04,125 | INFO     | fitting pss+swap vs Time
[2026-01-09 15:27:39] 2026-01-09 20:27:04,140 | INFO     | sum of square deviations: 231366230438.7716
[2026-01-09 15:27:39] 2026-01-09 20:27:04,201 | INFO     | sum of deviations: 932495646254.0867
[2026-01-09 15:27:39] 2026-01-09 20:27:04,201 | INFO     | mean x: 1767962747.6692393
[2026-01-09 15:27:39] 2026-01-09 20:27:04,201 | INFO     | mean y: 3058883.3936052923
[2026-01-09 15:27:39] 2026-01-09 20:27:04,201 | INFO     | intersect: -7122516710.825472
[2026-01-09 15:27:39] 2026-01-09 20:27:04,203 | INFO     | chi2: 20.84291594959556
[2026-01-09 15:27:39] 2026-01-09 20:27:04,216 | INFO     | sum of square deviations: 227561402242.2628
[2026-01-09 15:27:39] 2026-01-09 20:27:04,249 | INFO     | sum of deviations: 1279929937723.298
[2026-01-09 15:27:39] 2026-01-09 20:27:04,250 | INFO     | mean x: 1767962595.1784923
[2026-01-09 15:27:39] 2026-01-09 20:27:04,250 | INFO     | mean y: 3072806.7062084256
[2026-01-09 15:27:39] 2026-01-09 20:27:04,250 | INFO     | intersect: -9940916956.262774
[2026-01-09 15:27:39] 2026-01-09 20:27:04,251 | INFO     | chi2: 17.12295849191638
[2026-01-09 15:27:39] 2026-01-09 20:27:04,251 | INFO     | current chi2=17.12295849191638 (change=17.847586521363702 %)
[2026-01-09 15:27:39] 2026-01-09 20:27:04,251 | INFO     | right removable region: 901
[2026-01-09 15:27:39] 2026-01-09 20:27:04,253 | INFO     | sum of square deviations: 227560478702.26276
[2026-01-09 15:27:39] 2026-01-09 20:27:04,269 | INFO     | sum of deviations: 567413955945.7645
[2026-01-09 15:27:39] 2026-01-09 20:27:04,270 | INFO     | mean x: 1767962900.1784923
[2026-01-09 15:27:39] 2026-01-09 20:27:04,270 | INFO     | mean y: 3073512.1629711753
[2026-01-09 15:27:39] 2026-01-09 20:27:04,270 | INFO     | intersect: -4405279066.793218
[2026-01-09 15:27:39] 2026-01-09 20:27:04,271 | INFO     | chi2: 17.07802579553709
[2026-01-09 15:27:39] 2026-01-09 20:27:04,271 | INFO     | current chi2=17.07802579553709 (change=18.063164305623584 %)
[2026-01-09 15:27:39] 2026-01-09 20:27:04,271 | INFO     | left removable region: 10
[2026-01-09 15:27:39] 2026-01-09 20:27:04,273 | INFO     | sum of square deviations: 219336284729.38925
[2026-01-09 15:27:39] 2026-01-09 20:27:04,289 | INFO     | sum of deviations: 696008608916.8936
[2026-01-09 15:27:39] 2026-01-09 20:27:04,289 | INFO     | mean x: 1767962869.6992145
[2026-01-09 15:27:39] 2026-01-09 20:27:04,289 | INFO     | mean y: 3101905.7048260383
[2026-01-09 15:27:39] 2026-01-09 20:27:04,290 | INFO     | intersect: -5607084202.235526
[2026-01-09 15:27:39] 2026-01-09 20:27:04,291 | INFO     | chi2: 10.471588238446785
[2026-01-09 15:27:39] 2026-01-09 20:27:04,291 | INFO     | current memory leak: 3.17 B/s (using 891 data points, chi2=10.47)
[2026-01-09 15:27:39] 2026-01-09 20:27:04,292 | INFO     | could have reported an average CPU frequency of 2609 MHz (34 samples)
[2026-01-09 15:27:39] 2026-01-09 20:27:04,292 | INFO     | ..............................
[2026-01-09 15:27:39] 2026-01-09 20:27:04,292 | INFO     | . Timing measurements:
[2026-01-09 15:27:39] 2026-01-09 20:27:04,292 | INFO     | . get job = 0 s
[2026-01-09 15:27:39] 2026-01-09 20:27:04,292 | INFO     | . initial setup = 2 s
[2026-01-09 15:27:39] 2026-01-09 20:27:04,292 | INFO     | . payload setup = 9 s
[2026-01-09 15:27:39] 2026-01-09 20:27:04,292 | INFO     | . stage-in = 0 s
[2026-01-09 15:27:39] 2026-01-09 20:27:04,293 | INFO     | . payload execution = 55274 s
[2026-01-09 15:27:39] 2026-01-09 20:27:04,293 | INFO     | . stage-out = 4 s
[2026-01-09 15:27:39] 2026-01-09 20:27:04,293 | INFO     | . log creation = 1 s
[2026-01-09 15:27:39] 2026-01-09 20:27:04,293 | INFO     | ..............................
[2026-01-09 15:27:39] 2026-01-09 20:27:04,392 | INFO     | 
[2026-01-09 15:27:39] 2026-01-09 20:27:04,392 | INFO     | job summary report
[2026-01-09 15:27:39] 2026-01-09 20:27:04,392 | INFO     | --------------------------------------------------
[2026-01-09 15:27:39] 2026-01-09 20:27:04,392 | INFO     | PanDA job id: 6963077038
[2026-01-09 15:27:39] 2026-01-09 20:27:04,392 | INFO     | task id: 47947082
[2026-01-09 15:27:39] 2026-01-09 20:27:04,392 | INFO     | errors: (none)
[2026-01-09 15:27:39] 2026-01-09 20:27:04,392 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 15:27:39] 2026-01-09 20:27:04,392 | INFO     | pilot state: finished 
[2026-01-09 15:27:39] 2026-01-09 20:27:04,392 | INFO     | transexitcode: 0
[2026-01-09 15:27:39] 2026-01-09 20:27:04,392 | INFO     | exeerrorcode: 0
[2026-01-09 15:27:39] 2026-01-09 20:27:04,392 | INFO     | exeerrordiag: 
[2026-01-09 15:27:39] 2026-01-09 20:27:04,393 | INFO     | exitcode: 0
[2026-01-09 15:27:39] 2026-01-09 20:27:04,393 | INFO     | exitmsg: OK
[2026-01-09 15:27:39] 2026-01-09 20:27:04,393 | INFO     | cpuconsumptiontime: 58379 s
[2026-01-09 15:27:39] 2026-01-09 20:27:04,393 | INFO     | nevents: 150
[2026-01-09 15:27:39] 2026-01-09 20:27:04,393 | INFO     | neventsw: 0
[2026-01-09 15:27:39] 2026-01-09 20:27:04,393 | INFO     | pid: 2099931
[2026-01-09 15:27:39] 2026-01-09 20:27:04,393 | INFO     | pgrp: 2099931
[2026-01-09 15:27:39] 2026-01-09 20:27:04,393 | INFO     | corecount: 12
[2026-01-09 15:27:39] 2026-01-09 20:27:04,393 | INFO     | event service: False
[2026-01-09 15:27:39] 2026-01-09 20:27:04,393 | INFO     | sizes: {0: 2284381, 1: 2284580, 8: 2284842, 12: 2284870, 55287: 2336302, 55288: 2336301, 55294: 2345479, 55295: 2345535, 55327: 2345781}
[2026-01-09 15:27:39] 2026-01-09 20:27:04,393 | INFO     | --------------------------------------------------
[2026-01-09 15:27:39] 2026-01-09 20:27:04,393 | INFO     | 
[2026-01-09 15:27:39] 2026-01-09 20:27:04,393 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2026-01-09 15:27:39] 2026-01-09 20:27:04,419 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 15:27:39] 2026-01-09 20:27:04,419 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 15:27:39] 2026-01-09 20:27:04,419 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 15:27:39] 2026-01-09 20:27:04,419 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 15:27:39] 2026-01-09 20:27:04,419 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 15:27:39] 2026-01-09 20:27:04,419 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 15:27:39] 2026-01-09 20:27:04,419 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 15:27:39] 2026-01-09 20:27:04,419 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 15:27:39] 2026-01-09 20:27:04,419 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 15:27:39] 2026-01-09 20:27:04,420 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 15:27:39] 2026-01-09 20:27:04,420 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 15:27:39] 2026-01-09 20:27:04,420 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 15:27:39] 2026-01-09 20:27:04,420 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 15:27:39] 2026-01-09 20:27:04,420 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 15:27:39] 2026-01-09 20:27:04,420 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 15:27:39] 2026-01-09 20:27:04,420 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 15:27:39] 2026-01-09 20:27:04,420 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 15:27:39] 2026-01-09 20:27:04,420 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 15:27:39] 2026-01-09 20:27:04,420 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 15:27:39] 2026-01-09 20:27:04,420 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 15:27:39] 2026-01-09 20:27:04,421 | INFO     | job 6963077038 has completed (purged errors)
[2026-01-09 15:27:39] 2026-01-09 20:27:04,421 | INFO     | overall cleanup function is called
[2026-01-09 15:27:39] 2026-01-09 20:27:05,438 | INFO     | --- collectZombieJob: --- 10, [2099931]
[2026-01-09 15:27:39] 2026-01-09 20:27:05,438 | INFO     | zombie collector waiting for pid 2099931
[2026-01-09 15:27:39] 2026-01-09 20:27:05,439 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 15:27:39] 2026-01-09 20:27:05,439 | INFO     | collected zombie processes
[2026-01-09 15:27:39] 2026-01-09 20:27:05,439 | INFO     | will attempt to kill all subprocesses of pid=2099931
[2026-01-09 15:27:39] 2026-01-09 20:27:06,636 | INFO     | process IDs to be killed: [2099931] (in reverse order)
[2026-01-09 15:27:39] 2026-01-09 20:27:06,816 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 15:27:39] 2026-01-09 20:27:06,816 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 15:27:39] 2026-01-09 20:27:06,842 | INFO     | did not find any defunct processes belonging to 2099931
[2026-01-09 15:27:39] 2026-01-09 20:27:06,925 | INFO     | did not find any defunct processes belonging to 2099931
[2026-01-09 15:27:39] 2026-01-09 20:27:06,925 | INFO     | ready for new job
[2026-01-09 15:27:39] 2026-01-09 20:27:06,925 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 15:27:39] 2026-01-09 20:27:06,947 | INFO     | ***************************************
[2026-01-09 15:27:39] 2026-01-09 20:27:06,948 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 15:27:39] 2026-01-09 20:27:06,948 | INFO     | ***************************************
[2026-01-09 15:27:39] 2026-01-09 20:27:06,948 | INFO     | 
[2026-01-09 15:27:39] 2026-01-09 20:27:06,997 | INFO     | architecture information:
[2026-01-09 15:27:39] 2026-01-09 20:27:07,005 | INFO     | executing command: cat /etc/os-release
[2026-01-09 15:27:39] 2026-01-09 20:27:07,059 | INFO     | cat /etc/os-release:
[2026-01-09 15:27:39] NAME="CentOS Linux"
[2026-01-09 15:27:39] VERSION="7 (Core)"
[2026-01-09 15:27:39] ID="centos"
[2026-01-09 15:27:39] ID_LIKE="rhel fedora"
[2026-01-09 15:27:39] VERSION_ID="7"
[2026-01-09 15:27:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 15:27:39] ANSI_COLOR="0;31"
[2026-01-09 15:27:39] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 15:27:39] HOME_URL="https://www.centos.org/"
[2026-01-09 15:27:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 15:27:39] 
[2026-01-09 15:27:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 15:27:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 15:27:39] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 15:27:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 15:27:39] 
[2026-01-09 15:27:39] 2026-01-09 20:27:07,059 | INFO     | ***************************************
[2026-01-09 15:27:39] 2026-01-09 20:27:07,562 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2026-01-09 15:27:39] 2026-01-09 20:27:07,609 | INFO     | sufficient remaining disk space (92853501952 B)
[2026-01-09 15:27:39] 2026-01-09 20:27:07,609 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 15:27:39] 2026-01-09 20:27:07,609 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 15:27:39] 2026-01-09 20:27:07,609 | INFO     | update_server=False
[2026-01-09 15:27:39] 2026-01-09 20:27:07,609 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 15:27:39] 2026-01-09 20:27:07,610 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 15:27:39] 2026-01-09 20:27:08,299 | INFO     | all data control threads have been joined
[2026-01-09 15:27:39] 2026-01-09 20:27:08,579 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 15:27:39] 2026-01-09 20:27:08,580 | INFO     | aborting loop
[2026-01-09 15:27:39] 2026-01-09 20:27:08,614 | INFO     | [job] retrieve thread has finished
[2026-01-09 15:27:39] 2026-01-09 20:27:08,798 | INFO     | all payload control threads have been joined
[2026-01-09 15:27:39] 2026-01-09 20:27:08,843 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 15:27:39] 2026-01-09 20:27:08,914 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 15:27:39] 2026-01-09 20:27:08,920 | INFO     | [data] copytool_in thread has finished
[2026-01-09 15:27:39] 2026-01-09 20:27:08,948 | INFO     | [payload] failed_post thread has finished
[2026-01-09 15:27:39] 2026-01-09 20:27:09,101 | INFO     | all job control threads have been joined
[2026-01-09 15:27:39] 2026-01-09 20:27:09,217 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 15:27:39] 2026-01-09 20:27:09,305 | INFO     | [data] control thread has finished
[2026-01-09 15:27:39] 2026-01-09 20:27:09,343 | INFO     | [payload] validate_post thread has finished
[2026-01-09 15:27:39] 2026-01-09 20:27:09,406 | INFO     | [job] validate thread has finished
[2026-01-09 15:27:39] 2026-01-09 20:27:09,423 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 15:27:39] 2026-01-09 20:27:09,585 | INFO     | [job] job monitor thread has finished
[2026-01-09 15:27:39] 2026-01-09 20:27:09,618 | INFO     | [data] copytool_out thread has finished
[2026-01-09 15:27:39] 2026-01-09 20:27:09,804 | INFO     | [payload] control thread has finished
[2026-01-09 15:27:39] 2026-01-09 20:27:09,876 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 15:27:39] 2026-01-09 20:27:09,944 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 15:27:39] 2026-01-09 20:27:10,107 | INFO     | [job] control thread has finished
[2026-01-09 15:27:39] 2026-01-09 20:27:10,429 | INFO     | [job] queue monitor thread has finished
[2026-01-09 15:27:39] 2026-01-09 20:27:13,885 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 15:27:39] 2026-01-09 20:27:14,078 | INFO     | [monitor] cgroup control has ended
[2026-01-09 15:27:39] 2026-01-09 20:27:14,758 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140503894955840)>', '<ExcThread(monitor, started 140503387457280)>']
[2026-01-09 15:27:39] 2026-01-09 20:27:19,784 | INFO     | all workflow threads have been joined
[2026-01-09 15:27:39] 2026-01-09 20:27:19,786 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 15:27:39] 2026-01-09 20:27:19,786 | INFO     | traces error code: 0
[2026-01-09 15:27:39] 2026-01-09 20:27:19,787 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 15:27:39] 2026-01-09 20:27:38,070 | INFO     | PID=2074343 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 15:27:39] 2026-01-09 20:27:38,071 | INFO     | .. there are 17 such processes running
[2026-01-09 15:27:39] 2026-01-09 20:27:38,071 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 15:27:39] 2026-01-09 20:27:38,071 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 15:27:39] 2026-01-09 20:27:38,072 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 15:27:39] 2026-01-09 20:27:38,072 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 15:27:39] 2026-01-09 20:27:38,072 | INFO     | [monitor] control thread has ended
[2026-01-09 15:27:39] 2026-01-09 20:27:38,355 [wrapper] ==== pilot stdout END ====
[2026-01-09 15:27:39] 2026-01-09 20:27:38,393 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 15:27:39] 2026-01-09 20:27:38,396 [wrapper] pilotpid: 2074343
[2026-01-09 15:27:39] 2026-01-09 20:27:38,398 [wrapper] Pilot exit status: 0
[2026-01-09 15:27:39] 2026-01-09 20:27:38,412 [wrapper] pandaids: 6963077038
[2026-01-09 15:27:39] 2026-01-09 20:27:38,491 [wrapper] cleanup supervisor_pilot  203243 2074345
[2026-01-09 15:27:39] 2026-01-09 20:27:38,495 [wrapper] Test setup, not cleaning
[2026-01-09 15:27:39] 2026-01-09 20:27:38,509 [wrapper] apfmon messages muted
[2026-01-09 15:27:39] 2026-01-09 20:27:38,529 [wrapper] ==== wrapper stdout END ====
[2026-01-09 15:27:39] 2026-01-09 20:27:38,532 [wrapper] ==== wrapper stderr END ====
[2026-01-09 15:27:39]  *** Error codes and diagnostics ***
[2026-01-09 15:27:39]     "exeErrorCode": 0,
[2026-01-09 15:27:39]     "exeErrorDiag": "",
[2026-01-09 15:27:39]     "pilotErrorCode": 0,
[2026-01-09 15:27:39]     "pilotErrorDiag": "",
[2026-01-09 15:27:39]  *** Listing of results directory ***
[2026-01-09 15:27:39] total 570120
[2026-01-09 15:27:39] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 06:09 pilot3.tar.gz
[2026-01-09 15:27:39] -rwx------. 1 boincer umatlas     36322 Jan  8 06:56 runpilot2-wrapper.sh
[2026-01-09 15:27:39] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 06:57 queuedata.json
[2026-01-09 15:27:39] -rw-r--r--. 1 boincer umatlas       100 Jan  9 00:04 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 15:27:39] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 00:04 run_atlas
[2026-01-09 15:27:39] -rw-r--r--. 1 boincer umatlas       105 Jan  9 00:04 job.xml
[2026-01-09 15:27:39] -rw-r--r--. 2 boincer umatlas 414398668 Jan  9 00:04 EVNT.47947080._000147.pool.root.1
[2026-01-09 15:27:39] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 00:04 start_atlas.sh
[2026-01-09 15:27:39] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 00:04 shared
[2026-01-09 15:27:39] -rw-r--r--. 2 boincer umatlas    592612 Jan  9 00:04 input.tar.gz
[2026-01-09 15:27:39] -rw-r--r--. 1 boincer umatlas         0 Jan  9 00:04 boinc_lockfile
[2026-01-09 15:27:39] -rw-r--r--. 1 boincer umatlas      2877 Jan  9 00:04 pandaJob.out
[2026-01-09 15:27:39] -rw-------. 1 boincer umatlas        57 Jan  9 00:04 setup.sh.local
[2026-01-09 15:27:39] -rw-------. 1 boincer umatlas    989771 Jan  9 00:04 agis_schedconf.cvmfs.json
[2026-01-09 15:27:39] drwx------. 5 boincer umatlas      4096 Jan  9 00:04 pilot3
[2026-01-09 15:27:39] -rw-r--r--. 1 boincer umatlas       531 Jan  9 14:23 boinc_task_state.xml
[2026-01-09 15:27:39] -rw-r--r--. 1 boincer umatlas      6880 Jan  9 15:21 init_data.xml
[2026-01-09 15:27:39] -rw-------. 1 boincer umatlas 146139010 Jan  9 15:25 HITS.47947082._005297.pool.root.1
[2026-01-09 15:27:39] -rw-------. 1 boincer umatlas      1047 Jan  9 15:26 memory_monitor_summary.json
[2026-01-09 15:27:39] -rw-------. 1 boincer umatlas   1516240 Jan  9 15:26 agis_ddmendpoints.agis.ALL.json
[2026-01-09 15:27:39] -rw-------. 1 boincer umatlas   2301383 Jan  9 15:26 log.47947082._005297.job.log.tgz.1
[2026-01-09 15:27:39] -rw-------. 1 boincer umatlas      8604 Jan  9 15:27 heartbeat.json
[2026-01-09 15:27:39] -rw-------. 1 boincer umatlas       823 Jan  9 15:27 pilotlog.txt
[2026-01-09 15:27:39] -rw-------. 1 boincer umatlas        95 Jan  9 15:27 pilot_heartbeat.json
[2026-01-09 15:27:39] -rw-r--r--. 1 boincer umatlas        28 Jan  9 15:27 wrapper_checkpoint.txt
[2026-01-09 15:27:39] -rw-------. 1 boincer umatlas   7373063 Jan  9 15:27 log.47947082._005297.job.log.1
[2026-01-09 15:27:39] -rw-r--r--. 1 boincer umatlas      8192 Jan  9 15:27 boinc_mmap_file
[2026-01-09 15:27:39] -rw-------. 1 boincer umatlas       353 Jan  9 15:27 output.list
[2026-01-09 15:27:39] -rw-r--r--. 1 boincer umatlas       620 Jan  9 15:27 runtime_log
[2026-01-09 15:27:39] -rw-------. 1 boincer umatlas   9697280 Jan  9 15:27 result.tar.gz
[2026-01-09 15:27:39] -rw-r--r--. 1 boincer umatlas      9355 Jan  9 15:27 runtime_log.err
[2026-01-09 15:27:39] -rw-------. 1 boincer umatlas       660 Jan  9 15:27 PofLDmOo3x8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmHWkKDmIGrXHn.diag
[2026-01-09 15:27:39] -rw-r--r--. 1 boincer umatlas     21772 Jan  9 15:27 stderr.txt
[2026-01-09 15:27:39] HITS file was successfully produced:
[2026-01-09 15:27:39] -rw-------. 1 boincer umatlas 146139010 Jan  9 15:25 shared/HITS.pool.root.1
[2026-01-09 15:27:39]  *** Contents of shared directory: ***
[2026-01-09 15:27:39] total 557472
[2026-01-09 15:27:39] -rw-r--r--. 2 boincer umatlas 414398668 Jan  9 00:04 ATLAS.root_0
[2026-01-09 15:27:39] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 00:04 start_atlas.sh
[2026-01-09 15:27:39] -rw-r--r--. 2 boincer umatlas    592612 Jan  9 00:04 input.tar.gz
[2026-01-09 15:27:39] -rw-------. 1 boincer umatlas 146139010 Jan  9 15:25 HITS.pool.root.1
[2026-01-09 15:27:39] -rw-------. 1 boincer umatlas   9697280 Jan  9 15:27 result.tar.gz
15:27:40 (2067963): run_atlas exited; CPU time 59660.164538
15:27:40 (2067963): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN