Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:02:04 (446045): wrapper (7.7.26015): starting
00:02:04 (446045): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 00:02:04] Arguments: --nthreads 8
[2026-01-09 00:02:04] Threads: 8
[2026-01-09 00:02:04] Checking for CVMFS
[2026-01-09 00:02:06] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 00:02:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 00:02:07] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 00:02:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 00:02:09] 2.13.3.0 9702 92966 335100 154931 1 305 29563225 32935936 21417 16776704 0 432091452 99.692 328419600 32399 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-09 00:02:09] CVMFS is ok
[2026-01-09 00:02:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 00:02:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 00:02:09] Further information can be found at the LHC@home message board.
[2026-01-09 00:02:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 00:02:09] Checking for apptainer binary...
[2026-01-09 00:02:09] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 00:02:09] Running /usr/bin/apptainer --version
[2026-01-09 00:02:09] apptainer version 1.4.5-2.el9
[2026-01-09 00:02:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 00:02:11] c-4-37.aglt2.org
[2026-01-09 00:02:11] apptainer works
[2026-01-09 00:02:11] Set ATHENA_PROC_NUMBER=8
[2026-01-09 00:02:11] Set ATHENA_CORE_NUMBER=8
[2026-01-09 00:02:11] Starting ATLAS job with PandaID=6963152242
[2026-01-09 00:02:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 00:34:16]  *** The last 200 lines of the pilot log: ***
[2026-01-10 00:34:16] 2026-01-10 05:33:33,691 | INFO     | fitting pss+swap vs Time
[2026-01-10 00:34:16] 2026-01-10 05:33:33,693 | INFO     | sum of square deviations: 925875743885.0492
[2026-01-10 00:34:16] 2026-01-10 05:33:34,300 | INFO     | sum of deviations: 1841986893334.829
[2026-01-10 00:34:16] 2026-01-10 05:33:34,300 | INFO     | mean x: 1767979248.0368056
[2026-01-10 00:34:16] 2026-01-10 05:33:34,300 | INFO     | mean y: 2484315.040972222
[2026-01-10 00:34:16] 2026-01-10 05:33:34,300 | INFO     | intersect: -3514828482.1458616
[2026-01-10 00:34:16] 2026-01-10 05:33:34,344 | INFO     | chi2: 11.109114435806784
[2026-01-10 00:34:16] 2026-01-10 05:33:34,346 | INFO     | sum of square deviations: 916265038628.1998
[2026-01-10 00:34:16] 2026-01-10 05:33:34,504 | INFO     | sum of deviations: 2301130093911.6943
[2026-01-10 00:34:16] 2026-01-10 05:33:34,504 | INFO     | mean x: 1767979095.5421603
[2026-01-10 00:34:16] 2026-01-10 05:33:34,504 | INFO     | mean y: 2491600.781881533
[2026-01-10 00:34:16] 2026-01-10 05:33:34,505 | INFO     | intersect: -4437653696.314509
[2026-01-10 00:34:16] 2026-01-10 05:33:34,542 | INFO     | chi2: 7.538886068656244
[2026-01-10 00:34:16] 2026-01-10 05:33:34,542 | INFO     | current chi2=7.538886068656244 (change=32.13783049747887 %)
[2026-01-10 00:34:16] 2026-01-10 05:33:34,544 | INFO     | sum of square deviations: 906720991275.8591
[2026-01-10 00:34:16] 2026-01-10 05:33:34,712 | INFO     | sum of deviations: 2289406446104.1733
[2026-01-10 00:34:16] 2026-01-10 05:33:34,713 | INFO     | mean x: 1767978943.046853
[2026-01-10 00:34:16] 2026-01-10 05:33:34,713 | INFO     | mean y: 2491413.46013986
[2026-01-10 00:34:16] 2026-01-10 05:33:34,713 | INFO     | intersect: -4461530515.813213
[2026-01-10 00:34:16] 2026-01-10 05:33:34,715 | INFO     | chi2: 7.538385034838698
[2026-01-10 00:34:16] 2026-01-10 05:33:34,715 | INFO     | current chi2=7.538385034838698 (change=0.006645992696839699 %)
[2026-01-10 00:34:16] 2026-01-10 05:33:34,715 | INFO     | right removable region: 1429
[2026-01-10 00:34:16] 2026-01-10 05:33:34,721 | INFO     | sum of square deviations: 916263688698.2002
[2026-01-10 00:34:16] 2026-01-10 05:33:34,859 | INFO     | sum of deviations: 1362661334029.4785
[2026-01-10 00:34:16] 2026-01-10 05:33:34,860 | INFO     | mean x: 1767979400.5421603
[2026-01-10 00:34:16] 2026-01-10 05:33:34,860 | INFO     | mean y: 2491918.504529617
[2026-01-10 00:34:16] 2026-01-10 05:33:34,860 | INFO     | intersect: -2626835422.735278
[2026-01-10 00:34:16] 2026-01-10 05:33:34,866 | INFO     | chi2: 7.161556830601567
[2026-01-10 00:34:16] 2026-01-10 05:33:34,866 | INFO     | current chi2=7.161556830601567 (change=35.534404006871064 %)
[2026-01-10 00:34:16] 2026-01-10 05:33:34,868 | INFO     | sum of square deviations: 906718729217.1355
[2026-01-10 00:34:16] 2026-01-10 05:33:35,005 | INFO     | sum of deviations: 1010572447483.2996
[2026-01-10 00:34:16] 2026-01-10 05:33:35,005 | INFO     | mean x: 1767979553.0447552
[2026-01-10 00:34:16] 2026-01-10 05:33:35,005 | INFO     | mean y: 2497543.12027972
[2026-01-10 00:34:16] 2026-01-10 05:33:35,006 | INFO     | intersect: -1967982790.4705875
[2026-01-10 00:34:16] 2026-01-10 05:33:35,008 | INFO     | chi2: 5.106425870836638
[2026-01-10 00:34:16] 2026-01-10 05:33:35,012 | INFO     | current chi2=5.106425870836638 (change=28.696706713033223 %)
[2026-01-10 00:34:16] 2026-01-10 05:33:35,014 | INFO     | sum of square deviations: 897240369599.1478
[2026-01-10 00:34:16] 2026-01-10 05:33:35,237 | INFO     | monitor loop #3206: job 0:6963152242 is in state 'finished'
[2026-01-10 00:34:16] 2026-01-10 05:33:35,237 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 00:34:16] 2026-01-10 05:33:35,503 | INFO     | time since job start (88145s) is within the limit (349056.0s)
[2026-01-10 00:34:16] 2026-01-10 05:33:35,752 | INFO     | sum of deviations: 806137612878.1879
[2026-01-10 00:34:16] 2026-01-10 05:33:35,753 | INFO     | mean x: 1767979705.5466666
[2026-01-10 00:34:16] 2026-01-10 05:33:35,787 | INFO     | mean y: 2500830.8919298244
[2026-01-10 00:34:16] 2026-01-10 05:33:35,787 | INFO     | intersect: -1585964186.6631887
[2026-01-10 00:34:16] 2026-01-10 05:33:35,789 | INFO     | chi2: 4.406512425967637
[2026-01-10 00:34:16] 2026-01-10 05:33:35,789 | INFO     | current chi2=4.406512425967637 (change=13.70652316459314 %)
[2026-01-10 00:34:16] 2026-01-10 05:33:35,790 | INFO     | left removable region: 30
[2026-01-10 00:34:16] 2026-01-10 05:33:35,802 | INFO     | sum of square deviations: 849018081404.1499
[2026-01-10 00:34:16] 2026-01-10 05:33:36,071 | INFO     | sum of deviations: 948059483261.9312
[2026-01-10 00:34:16] 2026-01-10 05:33:36,071 | INFO     | mean x: 1767979827.5632594
[2026-01-10 00:34:16] 2026-01-10 05:33:36,072 | INFO     | mean y: 2513147.831308077
[2026-01-10 00:34:16] 2026-01-10 05:33:36,072 | INFO     | intersect: -1971708695.5539804
[2026-01-10 00:34:16] 2026-01-10 05:33:36,084 | INFO     | chi2: 0.28704606086602863
[2026-01-10 00:34:16] 2026-01-10 05:33:36,084 | INFO     | current memory leak: 1.12 B/s (using 1399 data points, chi2=0.29)
[2026-01-10 00:34:16] 2026-01-10 05:33:36,113 | INFO     | could have reported an average CPU frequency of 2599 MHz (50 samples)
[2026-01-10 00:34:16] 2026-01-10 05:33:36,113 | INFO     | ..............................
[2026-01-10 00:34:16] 2026-01-10 05:33:36,113 | INFO     | . Timing measurements:
[2026-01-10 00:34:16] 2026-01-10 05:33:36,114 | INFO     | . get job = 1 s
[2026-01-10 00:34:16] 2026-01-10 05:33:36,114 | INFO     | . initial setup = 10 s
[2026-01-10 00:34:16] 2026-01-10 05:33:36,114 | INFO     | . payload setup = 77 s
[2026-01-10 00:34:16] 2026-01-10 05:33:36,114 | INFO     | . stage-in = 1 s
[2026-01-10 00:34:16] 2026-01-10 05:33:36,114 | INFO     | . payload execution = 87859 s
[2026-01-10 00:34:16] 2026-01-10 05:33:36,114 | INFO     | . stage-out = 12 s
[2026-01-10 00:34:16] 2026-01-10 05:33:36,114 | INFO     | . log creation = 3 s
[2026-01-10 00:34:16] 2026-01-10 05:33:36,114 | INFO     | ..............................
[2026-01-10 00:34:16] 2026-01-10 05:33:37,054 | INFO     | 
[2026-01-10 00:34:16] 2026-01-10 05:33:37,054 | INFO     | job summary report
[2026-01-10 00:34:16] 2026-01-10 05:33:37,054 | INFO     | --------------------------------------------------
[2026-01-10 00:34:16] 2026-01-10 05:33:37,054 | INFO     | PanDA job id: 6963152242
[2026-01-10 00:34:16] 2026-01-10 05:33:37,054 | INFO     | task id: 47898826
[2026-01-10 00:34:16] 2026-01-10 05:33:37,054 | INFO     | errors: (none)
[2026-01-10 00:34:16] 2026-01-10 05:33:37,055 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 00:34:16] 2026-01-10 05:33:37,055 | INFO     | pilot state: finished 
[2026-01-10 00:34:16] 2026-01-10 05:33:37,055 | INFO     | transexitcode: 0
[2026-01-10 00:34:16] 2026-01-10 05:33:37,055 | INFO     | exeerrorcode: 0
[2026-01-10 00:34:16] 2026-01-10 05:33:37,055 | INFO     | exeerrordiag: 
[2026-01-10 00:34:16] 2026-01-10 05:33:37,055 | INFO     | exitcode: 0
[2026-01-10 00:34:16] 2026-01-10 05:33:37,055 | INFO     | exitmsg: OK
[2026-01-10 00:34:16] 2026-01-10 05:33:37,055 | INFO     | cpuconsumptiontime: 73168 s
[2026-01-10 00:34:16] 2026-01-10 05:33:37,055 | INFO     | nevents: 400
[2026-01-10 00:34:16] 2026-01-10 05:33:37,056 | INFO     | neventsw: 0
[2026-01-10 00:34:16] 2026-01-10 05:33:37,056 | INFO     | pid: 539724
[2026-01-10 00:34:16] 2026-01-10 05:33:37,056 | INFO     | pgrp: 539724
[2026-01-10 00:34:16] 2026-01-10 05:33:37,056 | INFO     | corecount: 8
[2026-01-10 00:34:16] 2026-01-10 05:33:37,056 | INFO     | event service: False
[2026-01-10 00:34:16] 2026-01-10 05:33:37,056 | INFO     | sizes: {0: 2283143, 1: 2283744, 3: 2283828, 6: 2283856, 7: 2284055, 8: 2284083, 10: 2284239, 21: 2284267, 33: 2284295, 44: 2284351, 57: 2284379, 69: 2284687, 79: 2
[2026-01-10 00:34:16] 2026-01-10 05:33:37,056 | INFO     | --------------------------------------------------
[2026-01-10 00:34:16] 2026-01-10 05:33:37,056 | INFO     | 
[2026-01-10 00:34:16] 2026-01-10 05:33:37,056 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-01-10 00:34:16] 2026-01-10 05:33:37,258 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 00:34:16] 2026-01-10 05:33:37,259 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 00:34:16] 2026-01-10 05:33:37,264 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 00:34:16] 2026-01-10 05:33:37,264 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 00:34:16] 2026-01-10 05:33:37,264 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 00:34:16] 2026-01-10 05:33:37,264 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 00:34:16] 2026-01-10 05:33:37,264 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 00:34:16] 2026-01-10 05:33:37,264 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 00:34:16] 2026-01-10 05:33:37,265 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 00:34:16] 2026-01-10 05:33:37,265 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 00:34:16] 2026-01-10 05:33:37,265 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 00:34:16] 2026-01-10 05:33:37,265 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 00:34:16] 2026-01-10 05:33:37,265 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 00:34:16] 2026-01-10 05:33:37,265 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 00:34:16] 2026-01-10 05:33:37,265 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 00:34:16] 2026-01-10 05:33:37,265 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 00:34:16] 2026-01-10 05:33:37,265 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 00:34:16] 2026-01-10 05:33:37,266 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 00:34:16] 2026-01-10 05:33:37,266 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 00:34:16] 2026-01-10 05:33:37,266 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 00:34:16] 2026-01-10 05:33:37,266 | INFO     | job 6963152242 has completed (purged errors)
[2026-01-10 00:34:16] 2026-01-10 05:33:37,266 | INFO     | overall cleanup function is called
[2026-01-10 00:34:16] 2026-01-10 05:33:38,353 | INFO     | --- collectZombieJob: --- 10, [539724]
[2026-01-10 00:34:16] 2026-01-10 05:33:38,353 | INFO     | zombie collector waiting for pid 539724
[2026-01-10 00:34:16] 2026-01-10 05:33:38,353 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 00:34:16] 2026-01-10 05:33:38,353 | INFO     | collected zombie processes
[2026-01-10 00:34:16] 2026-01-10 05:33:38,353 | INFO     | will attempt to kill all subprocesses of pid=539724
[2026-01-10 00:34:16] 2026-01-10 05:33:42,585 | INFO     | process IDs to be killed: [539724] (in reverse order)
[2026-01-10 00:34:16] 2026-01-10 05:33:42,785 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 00:34:16] 2026-01-10 05:33:42,786 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 00:34:16] 2026-01-10 05:33:42,891 | INFO     | did not find any defunct processes belonging to 539724
[2026-01-10 00:34:16] 2026-01-10 05:33:42,978 | INFO     | did not find any defunct processes belonging to 539724
[2026-01-10 00:34:16] 2026-01-10 05:33:42,978 | INFO     | ready for new job
[2026-01-10 00:34:16] 2026-01-10 05:33:42,979 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 00:34:16] 2026-01-10 05:33:42,999 | INFO     | ***************************************
[2026-01-10 00:34:16] 2026-01-10 05:33:43,000 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 00:34:16] 2026-01-10 05:33:43,000 | INFO     | ***************************************
[2026-01-10 00:34:16] 2026-01-10 05:33:43,000 | INFO     | 
[2026-01-10 00:34:16] 2026-01-10 05:33:43,002 | INFO     | architecture information:
[2026-01-10 00:34:16] 2026-01-10 05:33:43,015 | INFO     | executing command: cat /etc/os-release
[2026-01-10 00:34:16] 2026-01-10 05:33:43,195 | INFO     | cat /etc/os-release:
[2026-01-10 00:34:16] NAME="CentOS Linux"
[2026-01-10 00:34:16] VERSION="7 (Core)"
[2026-01-10 00:34:16] ID="centos"
[2026-01-10 00:34:16] ID_LIKE="rhel fedora"
[2026-01-10 00:34:16] VERSION_ID="7"
[2026-01-10 00:34:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 00:34:16] ANSI_COLOR="0;31"
[2026-01-10 00:34:16] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 00:34:16] HOME_URL="https://www.centos.org/"
[2026-01-10 00:34:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 00:34:16] 
[2026-01-10 00:34:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 00:34:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 00:34:16] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 00:34:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 00:34:16] 
[2026-01-10 00:34:16] 2026-01-10 05:33:43,196 | INFO     | ***************************************
[2026-01-10 00:34:16] 2026-01-10 05:33:43,720 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-01-10 00:34:16] 2026-01-10 05:33:43,916 | INFO     | sufficient remaining disk space (75803656192 B)
[2026-01-10 00:34:16] 2026-01-10 05:33:43,921 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 00:34:16] 2026-01-10 05:33:43,921 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 00:34:16] 2026-01-10 05:33:43,921 | INFO     | update_server=False
[2026-01-10 00:34:16] 2026-01-10 05:33:43,922 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 00:34:16] 2026-01-10 05:33:43,923 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 00:34:16] 2026-01-10 05:33:43,923 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 00:34:16] 2026-01-10 05:33:43,923 | INFO     | aborting loop
[2026-01-10 00:34:16] 2026-01-10 05:33:44,381 | INFO     | all job control threads have been joined
[2026-01-10 00:34:16] 2026-01-10 05:33:44,597 | INFO     | all payload control threads have been joined
[2026-01-10 00:34:16] 2026-01-10 05:33:44,927 | INFO     | [job] retrieve thread has finished
[2026-01-10 00:34:16] 2026-01-10 05:33:44,929 | INFO     | [job] job monitor thread has finished
[2026-01-10 00:34:16] 2026-01-10 05:33:44,987 | INFO     | all data control threads have been joined
[2026-01-10 00:34:16] 2026-01-10 05:33:45,102 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 00:34:16] 2026-01-10 05:33:45,103 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 00:34:16] 2026-01-10 05:33:45,103 | INFO     | [job] validate thread has finished
[2026-01-10 00:34:16] 2026-01-10 05:33:45,387 | INFO     | [job] control thread has finished
[2026-01-10 00:34:16] 2026-01-10 05:33:45,607 | INFO     | [payload] control thread has finished
[2026-01-10 00:34:16] 2026-01-10 05:33:45,691 | INFO     | [data] copytool_in thread has finished
[2026-01-10 00:34:16] 2026-01-10 05:33:45,791 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 00:34:16] 2026-01-10 05:33:45,828 | INFO     | [payload] failed_post thread has finished
[2026-01-10 00:34:16] 2026-01-10 05:33:45,830 | INFO     | [payload] validate_post thread has finished
[2026-01-10 00:34:16] 2026-01-10 05:33:45,930 | INFO     | [data] copytool_out thread has finished
[2026-01-10 00:34:16] 2026-01-10 05:33:45,993 | INFO     | [data] control thread has finished
[2026-01-10 00:34:16] 2026-01-10 05:33:46,088 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 00:34:16] 2026-01-10 05:33:46,124 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 00:34:16] 2026-01-10 05:33:47,144 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 00:34:16] 2026-01-10 05:33:47,144 | INFO     | [job] queue monitor thread has finished
[2026-01-10 00:34:16] 2026-01-10 05:33:51,158 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 00:34:16] 2026-01-10 05:33:57,321 | INFO     | [monitor] cgroup control has ended
[2026-01-10 00:34:16] 2026-01-10 05:33:58,002 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140265813808960)>', '<ExcThread(monitor, started 140264949663488)>']
[2026-01-10 00:34:16] 2026-01-10 05:34:03,028 | INFO     | all workflow threads have been joined
[2026-01-10 00:34:16] 2026-01-10 05:34:03,028 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 00:34:16] 2026-01-10 05:34:03,028 | INFO     | traces error code: 0
[2026-01-10 00:34:16] 2026-01-10 05:34:03,029 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 00:34:16] 2026-01-10 05:34:14,135 | INFO     | PID=483770 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-10 00:34:16] 2026-01-10 05:34:14,136 | INFO     | .. there are 42 such processes running
[2026-01-10 00:34:16] 2026-01-10 05:34:14,137 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 00:34:16] 2026-01-10 05:34:14,137 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 00:34:16] 2026-01-10 05:34:14,137 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 00:34:16] 2026-01-10 05:34:14,137 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 00:34:16] 2026-01-10 05:34:14,137 | INFO     | [monitor] control thread has ended
[2026-01-10 00:34:16] 2026-01-10 05:34:14,467 [wrapper] ==== pilot stdout END ====
[2026-01-10 00:34:16] 2026-01-10 05:34:14,535 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 00:34:16] 2026-01-10 05:34:14,560 [wrapper] pilotpid: 483770
[2026-01-10 00:34:16] 2026-01-10 05:34:14,583 [wrapper] Pilot exit status: 0
[2026-01-10 00:34:16] 2026-01-10 05:34:14,718 [wrapper] pandaids: 6963152242
[2026-01-10 00:34:16] 2026-01-10 05:34:14,999 [wrapper] cleanup supervisor_pilot 3652474 483771
[2026-01-10 00:34:16] 2026-01-10 05:34:15,031 [wrapper] Test setup, not cleaning
[2026-01-10 00:34:16] 2026-01-10 05:34:15,061 [wrapper] apfmon messages muted
[2026-01-10 00:34:16] 2026-01-10 05:34:15,096 [wrapper] ==== wrapper stdout END ====
[2026-01-10 00:34:16] 2026-01-10 05:34:15,113 [wrapper] ==== wrapper stderr END ====
[2026-01-10 00:34:16]  *** Error codes and diagnostics ***
[2026-01-10 00:34:16]     "exeErrorCode": 0,
[2026-01-10 00:34:16]     "exeErrorDiag": "",
[2026-01-10 00:34:16]     "pilotErrorCode": 0,
[2026-01-10 00:34:16]     "pilotErrorDiag": "",
[2026-01-10 00:34:16]  *** Listing of results directory ***
[2026-01-10 00:34:16] total 460448
[2026-01-10 00:34:16] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 11:02 pilot3.tar.gz
[2026-01-10 00:34:16] -rwx------. 1 boincer umatlas     36322 Jan  8 11:06 runpilot2-wrapper.sh
[2026-01-10 00:34:16] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 11:09 queuedata.json
[2026-01-10 00:34:16] -rw-r--r--. 1 boincer umatlas       100 Jan  9 00:02 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 00:34:16] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 00:02 run_atlas
[2026-01-10 00:34:16] -rw-r--r--. 1 boincer umatlas       105 Jan  9 00:02 job.xml
[2026-01-10 00:34:16] -rw-r--r--. 2 boincer umatlas 224713827 Jan  9 00:02 EVNT.47898824._001137.pool.root.1
[2026-01-10 00:34:16] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 00:02 start_atlas.sh
[2026-01-10 00:34:16] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 00:02 shared
[2026-01-10 00:34:16] -rw-r--r--. 2 boincer umatlas    592399 Jan  9 00:02 input.tar.gz
[2026-01-10 00:34:16] -rw-r--r--. 1 boincer umatlas         0 Jan  9 00:02 boinc_lockfile
[2026-01-10 00:34:16] -rw-r--r--. 1 boincer umatlas      2520 Jan  9 00:02 pandaJob.out
[2026-01-10 00:34:16] -rw-------. 1 boincer umatlas        57 Jan  9 00:02 setup.sh.local
[2026-01-10 00:34:16] -rw-------. 1 boincer umatlas    989771 Jan  9 00:04 agis_schedconf.cvmfs.json
[2026-01-10 00:34:16] drwx------. 5 boincer umatlas      4096 Jan  9 00:04 pilot3
[2026-01-10 00:34:16] -rw-------. 1 boincer umatlas 224406489 Jan 10 00:27 HITS.47898826._029043.pool.root.1
[2026-01-10 00:34:16] -rw-r--r--. 1 boincer umatlas       531 Jan 10 00:27 boinc_task_state.xml
[2026-01-10 00:34:16] -rw-r--r--. 1 boincer umatlas      6659 Jan 10 00:30 init_data.xml
[2026-01-10 00:34:16] -rw-------. 1 boincer umatlas      1055 Jan 10 00:32 memory_monitor_summary.json
[2026-01-10 00:34:16] -rw-------. 1 boincer umatlas   1516240 Jan 10 00:32 agis_ddmendpoints.agis.ALL.json
[2026-01-10 00:34:16] -rw-------. 1 boincer umatlas   1193066 Jan 10 00:32 log.47898826._029043.job.log.tgz.1
[2026-01-10 00:34:16] -rw-------. 1 boincer umatlas      7847 Jan 10 00:33 heartbeat.json
[2026-01-10 00:34:16] -rw-------. 1 boincer umatlas        95 Jan 10 00:34 pilot_heartbeat.json
[2026-01-10 00:34:16] -rw-------. 1 boincer umatlas       822 Jan 10 00:34 pilotlog.txt
[2026-01-10 00:34:16] -rw-------. 1 boincer umatlas   8039579 Jan 10 00:34 log.47898826._029043.job.log.1
[2026-01-10 00:34:16] -rw-------. 1 boincer umatlas       357 Jan 10 00:34 output.list
[2026-01-10 00:34:16] -rw-r--r--. 1 boincer umatlas       620 Jan 10 00:34 runtime_log
[2026-01-10 00:34:16] -rw-------. 1 boincer umatlas   9256960 Jan 10 00:34 result.tar.gz
[2026-01-10 00:34:16] -rw-r--r--. 1 boincer umatlas      8192 Jan 10 00:34 boinc_mmap_file
[2026-01-10 00:34:16] -rw-r--r--. 1 boincer umatlas      9333 Jan 10 00:34 runtime_log.err
[2026-01-10 00:34:16] -rw-------. 1 boincer umatlas       659 Jan 10 00:34 o3PMDmAi7x8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmpqfKDmas5VFo.diag
[2026-01-10 00:34:16] -rw-r--r--. 1 boincer umatlas        28 Jan 10 00:34 wrapper_checkpoint.txt
[2026-01-10 00:34:16] -rw-r--r--. 1 boincer umatlas     17548 Jan 10 00:34 stderr.txt
[2026-01-10 00:34:16] HITS file was successfully produced:
[2026-01-10 00:34:16] -rw-------. 1 boincer umatlas 224406489 Jan 10 00:27 shared/HITS.pool.root.1
[2026-01-10 00:34:16]  *** Contents of shared directory: ***
[2026-01-10 00:34:16] total 448240
[2026-01-10 00:34:16] -rw-r--r--. 2 boincer umatlas 224713827 Jan  9 00:02 ATLAS.root_0
[2026-01-10 00:34:16] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 00:02 start_atlas.sh
[2026-01-10 00:34:16] -rw-r--r--. 2 boincer umatlas    592399 Jan  9 00:02 input.tar.gz
[2026-01-10 00:34:16] -rw-------. 1 boincer umatlas 224406489 Jan 10 00:27 HITS.pool.root.1
[2026-01-10 00:34:16] -rw-------. 1 boincer umatlas   9256960 Jan 10 00:34 result.tar.gz
00:34:38 (446045): run_atlas exited; CPU time 76467.010053
00:34:38 (446045): called boinc_finish(0)

</stderr_txt>
]]>

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