Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:13:50 (2647378): wrapper (7.7.26015): starting
00:13:50 (2647378): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 00:13:50] Arguments: --nthreads 8
[2026-01-09 00:13:50] Threads: 8
[2026-01-09 00:13:50] Checking for CVMFS
[2026-01-09 00:13:50] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 00:13:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 00:13:51] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 00:13:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 00:13:52] 2.13.3.0 8081 21068 156544 154932 3 198 34964823 39288832 9165 16776704 0 8771730 99.558 9214789 35476 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-09 00:13:52] CVMFS is ok
[2026-01-09 00:13:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 00:13:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 00:13:53] Further information can be found at the LHC@home message board.
[2026-01-09 00:13:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 00:13:53] Checking for apptainer binary...
[2026-01-09 00:13:53] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 00:13:53] Running /usr/bin/apptainer --version
[2026-01-09 00:13:53] apptainer version 1.4.5-2.el9
[2026-01-09 00:13:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 00:13:53] c-210-13.aglt2.org
[2026-01-09 00:13:53] apptainer works
[2026-01-09 00:13:53] Set ATHENA_PROC_NUMBER=8
[2026-01-09 00:13:53] Set ATHENA_CORE_NUMBER=8
[2026-01-09 00:13:54] Starting ATLAS job with PandaID=6963147565
[2026-01-09 00:13:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 12:29:10]  *** The last 200 lines of the pilot log: ***
[2026-01-09 12:29:10] 2026-01-09 17:28:34,055 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6963147565/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 12:29:10] 2026-01-09 17:28:34,056 | INFO     | extracted standard info from prmon json
[2026-01-09 12:29:10] 2026-01-09 17:28:34,056 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 12:29:10] 2026-01-09 17:28:34,056 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 12:29:10] 2026-01-09 17:28:34,057 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 12:29:10] 2026-01-09 17:28:34,057 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 12:29:10] 2026-01-09 17:28:34,078 | INFO     | fitting pss+swap vs Time
[2026-01-09 12:29:10] 2026-01-09 17:28:34,079 | INFO     | sum of square deviations: 115251148844.114
[2026-01-09 12:29:10] 2026-01-09 17:28:34,097 | INFO     | sum of deviations: -75328497507.09587
[2026-01-09 12:29:10] 2026-01-09 17:28:34,098 | INFO     | mean x: 1767957752.72879
[2026-01-09 12:29:10] 2026-01-09 17:28:34,098 | INFO     | mean y: 2518630.337969402
[2026-01-09 12:29:10] 2026-01-09 17:28:34,098 | INFO     | intersect: 1158061134.7273562
[2026-01-09 12:29:10] 2026-01-09 17:28:34,099 | INFO     | chi2: 3.758382012169016
[2026-01-09 12:29:10] 2026-01-09 17:28:34,100 | INFO     | sum of square deviations: 112863434229.40596
[2026-01-09 12:29:10] 2026-01-09 17:28:34,112 | INFO     | sum of deviations: 15217148280.282988
[2026-01-09 12:29:10] 2026-01-09 17:28:34,113 | INFO     | mean x: 1767957600.232493
[2026-01-09 12:29:10] 2026-01-09 17:28:34,113 | INFO     | mean y: 2524388.5826330534
[2026-01-09 12:29:10] 2026-01-09 17:28:34,113 | INFO     | intersect: -235845754.41077954
[2026-01-09 12:29:10] 2026-01-09 17:28:34,114 | INFO     | chi2: 2.382798982521957
[2026-01-09 12:29:10] 2026-01-09 17:28:34,114 | INFO     | current chi2=2.382798982521957 (change=36.60040478038555 %)
[2026-01-09 12:29:10] 2026-01-09 17:28:34,115 | INFO     | sum of square deviations: 110508842554.61768
[2026-01-09 12:29:10] 2026-01-09 17:28:34,126 | INFO     | sum of deviations: 12031422557.38351
[2026-01-09 12:29:10] 2026-01-09 17:28:34,126 | INFO     | mean x: 1767957447.7334273
[2026-01-09 12:29:10] 2026-01-09 17:28:34,126 | INFO     | mean y: 2524182.245416079
[2026-01-09 12:29:10] 2026-01-09 17:28:34,127 | INFO     | intersect: -189958542.44370714
[2026-01-09 12:29:10] 2026-01-09 17:28:34,128 | INFO     | chi2: 2.3815914097635846
[2026-01-09 12:29:10] 2026-01-09 17:28:34,128 | INFO     | current chi2=2.3815914097635846 (change=0.05067875079811171 %)
[2026-01-09 12:29:10] 2026-01-09 17:28:34,128 | INFO     | right removable region: 708
[2026-01-09 12:29:10] 2026-01-09 17:28:34,129 | INFO     | sum of square deviations: 112863202063.4061
[2026-01-09 12:29:10] 2026-01-09 17:28:34,140 | INFO     | sum of deviations: -200398237043.70288
[2026-01-09 12:29:10] 2026-01-09 17:28:34,140 | INFO     | mean x: 1767957905.232493
[2026-01-09 12:29:10] 2026-01-09 17:28:34,140 | INFO     | mean y: 2526595.3837535013
[2026-01-09 12:29:10] 2026-01-09 17:28:34,140 | INFO     | intersect: 3141686577.5454116
[2026-01-09 12:29:10] 2026-01-09 17:28:34,141 | INFO     | chi2: 2.1525248705413706
[2026-01-09 12:29:10] 2026-01-09 17:28:34,142 | INFO     | current chi2=2.1525248705413706 (change=42.727352792455555 %)
[2026-01-09 12:29:10] 2026-01-09 17:28:34,143 | INFO     | sum of square deviations: 110508421653.2047
[2026-01-09 12:29:10] 2026-01-09 17:28:34,154 | INFO     | sum of deviations: -201935045641.28067
[2026-01-09 12:29:10] 2026-01-09 17:28:34,154 | INFO     | mean x: 1767958057.7376587
[2026-01-09 12:29:10] 2026-01-09 17:28:34,154 | INFO     | mean y: 2526694.9393511987
[2026-01-09 12:29:10] 2026-01-09 17:28:34,154 | INFO     | intersect: 3233164557.106038
[2026-01-09 12:29:10] 2026-01-09 17:28:34,155 | INFO     | chi2: 2.1505760766056143
[2026-01-09 12:29:10] 2026-01-09 17:28:34,155 | INFO     | current chi2=2.1505760766056143 (change=0.09053525756783376 %)
[2026-01-09 12:29:10] 2026-01-09 17:28:34,155 | INFO     | left removable region: 20
[2026-01-09 12:29:10] 2026-01-09 17:28:34,156 | INFO     | sum of square deviations: 100976579941.94774
[2026-01-09 12:29:10] 2026-01-09 17:28:34,167 | INFO     | sum of deviations: -69302801331.86057
[2026-01-09 12:29:10] 2026-01-09 17:28:34,167 | INFO     | mean x: 1767958027.2412791
[2026-01-09 12:29:10] 2026-01-09 17:28:34,167 | INFO     | mean y: 2529334.023255814
[2026-01-09 12:29:10] 2026-01-09 17:28:34,167 | INFO     | intersect: 1215924004.3063135
[2026-01-09 12:29:10] 2026-01-09 17:28:34,168 | INFO     | chi2: 0.6856660025527788
[2026-01-09 12:29:10] 2026-01-09 17:28:34,168 | INFO     | current memory leak: -0.69 B/s (using 688 data points, chi2=0.69)
[2026-01-09 12:29:10] 2026-01-09 17:28:34,169 | INFO     | could have reported an average CPU frequency of 2600 MHz (27 samples)
[2026-01-09 12:29:10] 2026-01-09 17:28:34,169 | INFO     | ..............................
[2026-01-09 12:29:10] 2026-01-09 17:28:34,169 | INFO     | . Timing measurements:
[2026-01-09 12:29:10] 2026-01-09 17:28:34,169 | INFO     | . get job = 1 s
[2026-01-09 12:29:10] 2026-01-09 17:28:34,170 | INFO     | . initial setup = 6 s
[2026-01-09 12:29:10] 2026-01-09 17:28:34,170 | INFO     | . payload setup = 28 s
[2026-01-09 12:29:10] 2026-01-09 17:28:34,170 | INFO     | . stage-in = 0 s
[2026-01-09 12:29:10] 2026-01-09 17:28:34,170 | INFO     | . payload execution = 43834 s
[2026-01-09 12:29:10] 2026-01-09 17:28:34,170 | INFO     | . stage-out = 7 s
[2026-01-09 12:29:10] 2026-01-09 17:28:34,170 | INFO     | . log creation = 2 s
[2026-01-09 12:29:10] 2026-01-09 17:28:34,170 | INFO     | ..............................
[2026-01-09 12:29:10] 2026-01-09 17:28:34,446 | INFO     | time since job start (43994s) is within the limit (349056.0s)
[2026-01-09 12:29:10] 2026-01-09 17:28:35,160 | INFO     | 
[2026-01-09 12:29:10] 2026-01-09 17:28:35,160 | INFO     | job summary report
[2026-01-09 12:29:10] 2026-01-09 17:28:35,160 | INFO     | --------------------------------------------------
[2026-01-09 12:29:10] 2026-01-09 17:28:35,161 | INFO     | PanDA job id: 6963147565
[2026-01-09 12:29:10] 2026-01-09 17:28:35,161 | INFO     | task id: 47898826
[2026-01-09 12:29:10] 2026-01-09 17:28:35,161 | INFO     | errors: (none)
[2026-01-09 12:29:10] 2026-01-09 17:28:35,161 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 12:29:10] 2026-01-09 17:28:35,161 | INFO     | pilot state: finished 
[2026-01-09 12:29:10] 2026-01-09 17:28:35,161 | INFO     | transexitcode: 0
[2026-01-09 12:29:10] 2026-01-09 17:28:35,161 | INFO     | exeerrorcode: 0
[2026-01-09 12:29:10] 2026-01-09 17:28:35,161 | INFO     | exeerrordiag: 
[2026-01-09 12:29:10] 2026-01-09 17:28:35,161 | INFO     | exitcode: 0
[2026-01-09 12:29:10] 2026-01-09 17:28:35,161 | INFO     | exitmsg: OK
[2026-01-09 12:29:10] 2026-01-09 17:28:35,161 | INFO     | cpuconsumptiontime: 65127 s
[2026-01-09 12:29:10] 2026-01-09 17:28:35,162 | INFO     | nevents: 400
[2026-01-09 12:29:10] 2026-01-09 17:28:35,162 | INFO     | neventsw: 0
[2026-01-09 12:29:10] 2026-01-09 17:28:35,162 | INFO     | pid: 2662429
[2026-01-09 12:29:10] 2026-01-09 17:28:35,162 | INFO     | pgrp: 2662429
[2026-01-09 12:29:10] 2026-01-09 17:28:35,162 | INFO     | corecount: 8
[2026-01-09 12:29:10] 2026-01-09 17:28:35,162 | INFO     | event service: False
[2026-01-09 12:29:10] 2026-01-09 17:28:35,162 | INFO     | sizes: {0: 2283742, 1: 2283997, 2: 2284025, 13: 2284025, 24: 2284081, 32: 2284371, 34: 2284527, 43869: 2329542, 43870: 2329541, 43878: 2338623, 43880: 2338679, 439
[2026-01-09 12:29:10] 2026-01-09 17:28:35,162 | INFO     | --------------------------------------------------
[2026-01-09 12:29:10] 2026-01-09 17:28:35,162 | INFO     | 
[2026-01-09 12:29:10] 2026-01-09 17:28:35,162 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2026-01-09 12:29:10] 2026-01-09 17:28:35,405 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 12:29:10] 2026-01-09 17:28:35,406 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 12:29:10] 2026-01-09 17:28:35,406 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 12:29:10] 2026-01-09 17:28:35,406 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 12:29:10] 2026-01-09 17:28:35,406 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 12:29:10] 2026-01-09 17:28:35,406 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 12:29:10] 2026-01-09 17:28:35,406 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 12:29:10] 2026-01-09 17:28:35,406 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 12:29:10] 2026-01-09 17:28:35,406 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 12:29:10] 2026-01-09 17:28:35,406 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 12:29:10] 2026-01-09 17:28:35,406 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 12:29:10] 2026-01-09 17:28:35,407 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 12:29:10] 2026-01-09 17:28:35,407 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 12:29:10] 2026-01-09 17:28:35,407 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 12:29:10] 2026-01-09 17:28:35,407 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 12:29:10] 2026-01-09 17:28:35,407 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 12:29:10] 2026-01-09 17:28:35,407 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 12:29:10] 2026-01-09 17:28:35,407 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 12:29:10] 2026-01-09 17:28:35,407 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 12:29:10] 2026-01-09 17:28:35,407 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 12:29:10] 2026-01-09 17:28:35,408 | INFO     | job 6963147565 has completed (purged errors)
[2026-01-09 12:29:10] 2026-01-09 17:28:35,408 | INFO     | overall cleanup function is called
[2026-01-09 12:29:10] 2026-01-09 17:28:36,434 | INFO     | --- collectZombieJob: --- 10, [2662429]
[2026-01-09 12:29:10] 2026-01-09 17:28:36,434 | INFO     | zombie collector waiting for pid 2662429
[2026-01-09 12:29:10] 2026-01-09 17:28:36,434 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 12:29:10] 2026-01-09 17:28:36,434 | INFO     | collected zombie processes
[2026-01-09 12:29:10] 2026-01-09 17:28:36,435 | INFO     | will attempt to kill all subprocesses of pid=2662429
[2026-01-09 12:29:10] 2026-01-09 17:28:37,535 | INFO     | process IDs to be killed: [2662429] (in reverse order)
[2026-01-09 12:29:10] 2026-01-09 17:28:37,601 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 12:29:10] 2026-01-09 17:28:37,601 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 12:29:10] 2026-01-09 17:28:37,609 | INFO     | did not find any defunct processes belonging to 2662429
[2026-01-09 12:29:10] 2026-01-09 17:28:37,616 | INFO     | did not find any defunct processes belonging to 2662429
[2026-01-09 12:29:10] 2026-01-09 17:28:37,616 | INFO     | ready for new job
[2026-01-09 12:29:10] 2026-01-09 17:28:37,616 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 12:29:10] 2026-01-09 17:28:37,620 | INFO     | ***************************************
[2026-01-09 12:29:10] 2026-01-09 17:28:37,620 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 12:29:10] 2026-01-09 17:28:37,620 | INFO     | ***************************************
[2026-01-09 12:29:10] 2026-01-09 17:28:37,620 | INFO     | 
[2026-01-09 12:29:10] 2026-01-09 17:28:37,622 | INFO     | architecture information:
[2026-01-09 12:29:10] 2026-01-09 17:28:37,622 | INFO     | executing command: cat /etc/os-release
[2026-01-09 12:29:10] 2026-01-09 17:28:37,637 | INFO     | cat /etc/os-release:
[2026-01-09 12:29:10] NAME="CentOS Linux"
[2026-01-09 12:29:10] VERSION="7 (Core)"
[2026-01-09 12:29:10] ID="centos"
[2026-01-09 12:29:10] ID_LIKE="rhel fedora"
[2026-01-09 12:29:10] VERSION_ID="7"
[2026-01-09 12:29:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 12:29:10] ANSI_COLOR="0;31"
[2026-01-09 12:29:10] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 12:29:10] HOME_URL="https://www.centos.org/"
[2026-01-09 12:29:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 12:29:10] 
[2026-01-09 12:29:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 12:29:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 12:29:10] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 12:29:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 12:29:10] 
[2026-01-09 12:29:10] 2026-01-09 17:28:37,637 | INFO     | ***************************************
[2026-01-09 12:29:10] 2026-01-09 17:28:38,140 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2026-01-09 12:29:10] 2026-01-09 17:28:38,281 | INFO     | sufficient remaining disk space (52957282304 B)
[2026-01-09 12:29:10] 2026-01-09 17:28:38,281 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 12:29:10] 2026-01-09 17:28:38,281 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 12:29:10] 2026-01-09 17:28:38,281 | INFO     | update_server=False
[2026-01-09 12:29:10] 2026-01-09 17:28:38,281 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 12:29:10] 2026-01-09 17:28:38,297 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 12:29:10] 2026-01-09 17:28:38,391 | INFO     | all data control threads have been joined
[2026-01-09 12:29:10] 2026-01-09 17:28:38,599 | INFO     | [monitor] cgroup control has ended
[2026-01-09 12:29:10] 2026-01-09 17:28:38,718 | INFO     | all job control threads have been joined
[2026-01-09 12:29:10] 2026-01-09 17:28:38,777 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-09 12:29:10] 2026-01-09 17:28:38,777 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-09 12:29:10] 2026-01-09 17:28:38,777 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 12:29:10] 2026-01-09 17:28:38,778 | INFO     | will abort loop
[2026-01-09 12:29:10] 2026-01-09 17:28:38,787 | INFO     | all payload control threads have been joined
[2026-01-09 12:29:10] 2026-01-09 17:28:38,813 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 12:29:10] 2026-01-09 17:28:39,286 | INFO     | [job] retrieve thread has finished
[2026-01-09 12:29:10] 2026-01-09 17:28:39,310 | INFO     | [job] validate thread has finished
[2026-01-09 12:29:10] 2026-01-09 17:28:39,314 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 12:29:10] 2026-01-09 17:28:39,397 | INFO     | [data] control thread has finished
[2026-01-09 12:29:10] 2026-01-09 17:28:39,499 | INFO     | [payload] validate_post thread has finished
[2026-01-09 12:29:10] 2026-01-09 17:28:39,724 | INFO     | [job] control thread has finished
[2026-01-09 12:29:10] 2026-01-09 17:28:39,744 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 12:29:10] 2026-01-09 17:28:39,783 | INFO     | [job] job monitor thread has finished
[2026-01-09 12:29:10] 2026-01-09 17:28:39,793 | INFO     | [payload] control thread has finished
[2026-01-09 12:29:10] 2026-01-09 17:28:40,093 | INFO     | [data] copytool_in thread has finished
[2026-01-09 12:29:10] 2026-01-09 17:28:40,117 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 12:29:10] 2026-01-09 17:28:40,691 | INFO     | [payload] failed_post thread has finished
[2026-01-09 12:29:10] 2026-01-09 17:28:40,750 | INFO     | [job] queue monitor thread has finished
[2026-01-09 12:29:10] 2026-01-09 17:28:40,768 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 12:29:10] 2026-01-09 17:28:40,774 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 12:29:10] 2026-01-09 17:28:40,820 | INFO     | [data] copytool_out thread has finished
[2026-01-09 12:29:10] 2026-01-09 17:28:42,313 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 12:29:10] 2026-01-09 17:28:44,049 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140416196790080)>', '<ExcThread(monitor, started 140415810389760)>']
[2026-01-09 12:29:10] 2026-01-09 17:28:49,075 | INFO     | all workflow threads have been joined
[2026-01-09 12:29:10] 2026-01-09 17:28:49,079 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 12:29:10] 2026-01-09 17:28:49,079 | INFO     | traces error code: 0
[2026-01-09 12:29:10] 2026-01-09 17:28:49,080 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 12:29:10] 2026-01-09 17:29:09,814 | INFO     | PID=2652906 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 12:29:10] 2026-01-09 17:29:09,814 | INFO     | .. there are 7 such processes running
[2026-01-09 12:29:10] 2026-01-09 17:29:09,815 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 12:29:10] 2026-01-09 17:29:09,815 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 12:29:10] 2026-01-09 17:29:09,815 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 12:29:10] 2026-01-09 17:29:09,815 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 12:29:10] 2026-01-09 17:29:09,815 | CRITICAL | thread 'MainThread' is not alive
[2026-01-09 12:29:10] 2026-01-09 17:29:09,816 | INFO     | [monitor] control thread has ended
[2026-01-09 12:29:10] 2026-01-09 17:29:09,955 [wrapper] ==== pilot stdout END ====
[2026-01-09 12:29:10] 2026-01-09 17:29:09,958 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 12:29:10] 2026-01-09 17:29:09,961 [wrapper] pilotpid: 2652906
[2026-01-09 12:29:10] 2026-01-09 17:29:09,964 [wrapper] Pilot exit status: 0
[2026-01-09 12:29:10] 2026-01-09 17:29:09,978 [wrapper] pandaids: 6963147565
[2026-01-09 12:29:10] 2026-01-09 17:29:10,024 [wrapper] cleanup supervisor_pilot 3804435 2652907
[2026-01-09 12:29:10] 2026-01-09 17:29:10,027 [wrapper] Test setup, not cleaning
[2026-01-09 12:29:10] 2026-01-09 17:29:10,030 [wrapper] apfmon messages muted
[2026-01-09 12:29:10] 2026-01-09 17:29:10,033 [wrapper] ==== wrapper stdout END ====
[2026-01-09 12:29:10] 2026-01-09 17:29:10,035 [wrapper] ==== wrapper stderr END ====
[2026-01-09 12:29:10]  *** Error codes and diagnostics ***
[2026-01-09 12:29:10]     "exeErrorCode": 0,
[2026-01-09 12:29:10]     "exeErrorDiag": "",
[2026-01-09 12:29:10]     "pilotErrorCode": 0,
[2026-01-09 12:29:10]     "pilotErrorDiag": "",
[2026-01-09 12:29:10]  *** Listing of results directory ***
[2026-01-09 12:29:10] total 448820
[2026-01-09 12:29:10] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 11:02 pilot3.tar.gz
[2026-01-09 12:29:10] -rwx------. 1 boincer umatlas     36322 Jan  8 11:05 runpilot2-wrapper.sh
[2026-01-09 12:29:10] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 11:07 queuedata.json
[2026-01-09 12:29:10] -rw-r--r--. 1 boincer umatlas       100 Jan  9 00:13 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 12:29:10] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 00:13 run_atlas
[2026-01-09 12:29:10] -rw-r--r--. 1 boincer umatlas       105 Jan  9 00:13 job.xml
[2026-01-09 12:29:10] -rw-r--r--. 2 boincer umatlas 224241382 Jan  9 00:13 EVNT.47898824._000813.pool.root.1
[2026-01-09 12:29:10] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 00:13 start_atlas.sh
[2026-01-09 12:29:10] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 00:13 shared
[2026-01-09 12:29:10] -rw-r--r--. 2 boincer umatlas    592398 Jan  9 00:13 input.tar.gz
[2026-01-09 12:29:10] -rw-r--r--. 1 boincer umatlas         0 Jan  9 00:13 boinc_lockfile
[2026-01-09 12:29:10] -rw-r--r--. 1 boincer umatlas      2519 Jan  9 00:13 pandaJob.out
[2026-01-09 12:29:10] -rw-------. 1 boincer umatlas        57 Jan  9 00:13 setup.sh.local
[2026-01-09 12:29:10] -rw-------. 1 boincer umatlas    989771 Jan  9 00:15 agis_schedconf.cvmfs.json
[2026-01-09 12:29:10] drwx------. 5 boincer umatlas      4096 Jan  9 00:15 pilot3
[2026-01-09 12:29:10] -rw-r--r--. 1 boincer umatlas      6657 Jan  9 12:18 init_data.xml
[2026-01-09 12:29:10] -rw-------. 1 boincer umatlas 218414439 Jan  9 12:25 HITS.47898826._027683.pool.root.1
[2026-01-09 12:29:10] -rw-r--r--. 1 boincer umatlas       531 Jan  9 12:25 boinc_task_state.xml
[2026-01-09 12:29:10] -rw-------. 1 boincer umatlas      1040 Jan  9 12:27 memory_monitor_summary.json
[2026-01-09 12:29:10] -rw-------. 1 boincer umatlas   1516240 Jan  9 12:28 agis_ddmendpoints.agis.ALL.json
[2026-01-09 12:29:10] -rw-------. 1 boincer umatlas    837263 Jan  9 12:28 log.47898826._027683.job.log.tgz.1
[2026-01-09 12:29:10] -rw-------. 1 boincer umatlas      7822 Jan  9 12:28 heartbeat.json
[2026-01-09 12:29:10] -rw-r--r--. 1 boincer umatlas      8192 Jan  9 12:29 boinc_mmap_file
[2026-01-09 12:29:10] -rw-r--r--. 1 boincer umatlas        28 Jan  9 12:29 wrapper_checkpoint.txt
[2026-01-09 12:29:10] -rw-------. 1 boincer umatlas        95 Jan  9 12:29 pilot_heartbeat.json
[2026-01-09 12:29:10] -rw-------. 1 boincer umatlas       892 Jan  9 12:29 pilotlog.txt
[2026-01-09 12:29:10] -rw-------. 1 boincer umatlas   5673915 Jan  9 12:29 log.47898826._027683.job.log.1
[2026-01-09 12:29:10] -rw-------. 1 boincer umatlas       357 Jan  9 12:29 output.list
[2026-01-09 12:29:10] -rw-r--r--. 1 boincer umatlas       620 Jan  9 12:29 runtime_log
[2026-01-09 12:29:10] -rw-------. 1 boincer umatlas   6533120 Jan  9 12:29 result.tar.gz
[2026-01-09 12:29:10] -rw-------. 1 boincer umatlas       658 Jan  9 12:29 si6KDm1g7x8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmylfKDmuABvUn.diag
[2026-01-09 12:29:10] -rw-r--r--. 1 boincer umatlas      9343 Jan  9 12:29 runtime_log.err
[2026-01-09 12:29:10] -rw-r--r--. 1 boincer umatlas     21193 Jan  9 12:29 stderr.txt
[2026-01-09 12:29:10] HITS file was successfully produced:
[2026-01-09 12:29:10] -rw-------. 1 boincer umatlas 218414439 Jan  9 12:25 shared/HITS.pool.root.1
[2026-01-09 12:29:10]  *** Contents of shared directory: ***
[2026-01-09 12:29:10] total 439264
[2026-01-09 12:29:10] -rw-r--r--. 2 boincer umatlas 224241382 Jan  9 00:13 ATLAS.root_0
[2026-01-09 12:29:10] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 00:13 start_atlas.sh
[2026-01-09 12:29:10] -rw-r--r--. 2 boincer umatlas    592398 Jan  9 00:13 input.tar.gz
[2026-01-09 12:29:10] -rw-------. 1 boincer umatlas 218414439 Jan  9 12:25 HITS.pool.root.1
[2026-01-09 12:29:10] -rw-------. 1 boincer umatlas   6533120 Jan  9 12:29 result.tar.gz
12:29:11 (2647378): run_atlas exited; CPU time 66280.092475
12:29:11 (2647378): called boinc_finish(0)

</stderr_txt>
]]>

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