Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:02:03 (22077): wrapper (7.7.26015): starting
00:02:03 (22077): wrapper: running run_atlas (--nthreads 9)
[2026-01-09 00:02:03] Arguments: --nthreads 9
[2026-01-09 00:02:03] Threads: 9
[2026-01-09 00:02:03] Checking for CVMFS
[2026-01-09 00:02:04] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 00:02:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 00:02:04] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 00:02:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 00:02:05] 2.13.3.0 12468 92967 427700 154931 0 514 16811248 32947201 18518 16776704 0 331639531 99.420 498364576 34082 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-09 00:02:05] CVMFS is ok
[2026-01-09 00:02:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 00:02:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 00:02:05] Further information can be found at the LHC@home message board.
[2026-01-09 00:02:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 00:02:05] Checking for apptainer binary...
[2026-01-09 00:02:05] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 00:02:05] Running /usr/bin/apptainer --version
[2026-01-09 00:02:06] apptainer version 1.4.5-2.el9
[2026-01-09 00:02:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 00:02:06] c6-6-8-1.aglt2.org
[2026-01-09 00:02:06] apptainer works
[2026-01-09 00:02:06] Set ATHENA_PROC_NUMBER=9
[2026-01-09 00:02:06] Set ATHENA_CORE_NUMBER=9
[2026-01-09 00:02:06] Starting ATLAS job with PandaID=6963148264
[2026-01-09 00:02:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 05:58:11]  *** The last 200 lines of the pilot log: ***
[2026-01-09 05:58:11] 2026-01-09 10:44:51,914 | INFO     | time since job start (20499s) is within the limit (349056.0s)
[2026-01-09 05:58:11] 2026-01-09 10:44:51,914 | INFO     | 20506s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2026-01-09 05:58:11] 2026-01-09 10:44:53,416 | INFO     | monitor loop #1240: job 0:6963148264 is in state 'finished'
[2026-01-09 05:58:11] 2026-01-09 10:44:53,416 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 05:58:11] 2026-01-09 10:44:53,921 | INFO     | time since job start (20501s) is within the limit (349056.0s)
[2026-01-09 05:58:11] 2026-01-09 10:44:55,928 | INFO     | time since job start (20503s) is within the limit (349056.0s)
[2026-01-09 05:58:11] 2026-01-09 10:44:55,940 | INFO     | monitor loop #1241: job 0:6963148264 is in state 'finished'
[2026-01-09 05:58:11] 2026-01-09 10:44:55,940 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 05:58:11] 2026-01-09 10:44:56,258 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-09 05:58:11] 2026-01-09 10:44:56,287 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2682.1137604166656
[2026-01-09 05:58:11] 2026-01-09 10:44:56,305 | INFO     | using path: /tmp/boinchome/slots/9/PanDA_Pilot-6963148264/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 05:58:11] 2026-01-09 10:44:56,306 | INFO     | extracted standard info from prmon json
[2026-01-09 05:58:11] 2026-01-09 10:44:56,306 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 05:58:11] 2026-01-09 10:44:56,306 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 05:58:11] 2026-01-09 10:44:56,307 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 05:58:11] 2026-01-09 10:44:56,307 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 05:58:11] 2026-01-09 10:44:56,313 | INFO     | fitting pss+swap vs Time
[2026-01-09 05:58:11] 2026-01-09 10:44:56,314 | INFO     | sum of square deviations: 11553881908.35924
[2026-01-09 05:58:11] 2026-01-09 10:44:56,316 | INFO     | sum of deviations: 120942457988.58687
[2026-01-09 05:58:11] 2026-01-09 10:44:56,317 | INFO     | mean x: 1767945286.3173652
[2026-01-09 05:58:11] 2026-01-09 10:44:56,317 | INFO     | mean y: 2517514.48502994
[2026-01-09 05:58:11] 2026-01-09 10:44:56,317 | INFO     | intersect: -18503786272.630836
[2026-01-09 05:58:11] 2026-01-09 10:44:56,317 | INFO     | chi2: 3.6755413902111185
[2026-01-09 05:58:11] 2026-01-09 10:44:56,318 | INFO     | sum of square deviations: 11042780197.77503
[2026-01-09 05:58:11] 2026-01-09 10:44:56,321 | INFO     | sum of deviations: 140366468131.98495
[2026-01-09 05:58:11] 2026-01-09 10:44:56,321 | INFO     | mean x: 1767945133.8237083
[2026-01-09 05:58:11] 2026-01-09 10:44:56,321 | INFO     | mean y: 2523232.2583586625
[2026-01-09 05:58:11] 2026-01-09 10:44:56,321 | INFO     | intersect: -22470097778.16113
[2026-01-09 05:58:11] 2026-01-09 10:44:56,322 | INFO     | chi2: 2.986853331179375
[2026-01-09 05:58:11] 2026-01-09 10:44:56,322 | INFO     | current chi2=2.986853331179375 (change=18.73705084279261 %)
[2026-01-09 05:58:11] 2026-01-09 10:44:56,322 | INFO     | right removable region: 328
[2026-01-09 05:58:11] 2026-01-09 10:44:56,322 | INFO     | sum of square deviations: 11042654172.468142
[2026-01-09 05:58:11] 2026-01-09 10:44:56,325 | INFO     | sum of deviations: 32848355451.78719
[2026-01-09 05:58:11] 2026-01-09 10:44:56,325 | INFO     | mean x: 1767945438.8297873
[2026-01-09 05:58:11] 2026-01-09 10:44:56,325 | INFO     | mean y: 2543721.103343465
[2026-01-09 05:58:11] 2026-01-09 10:44:56,326 | INFO     | intersect: -5256527086.242842
[2026-01-09 05:58:11] 2026-01-09 10:44:56,326 | INFO     | chi2: 0.9915251498239681
[2026-01-09 05:58:11] 2026-01-09 10:44:56,326 | INFO     | current chi2=0.9915251498239681 (change=73.02369788394584 %)
[2026-01-09 05:58:11] 2026-01-09 10:44:56,327 | INFO     | sum of square deviations: 10546748996.65444
[2026-01-09 05:58:11] 2026-01-09 10:44:56,329 | INFO     | sum of deviations: 6010610336.425926
[2026-01-09 05:58:11] 2026-01-09 10:44:56,330 | INFO     | mean x: 1767945591.3395061
[2026-01-09 05:58:11] 2026-01-09 10:44:56,330 | INFO     | mean y: 2551957.787037037
[2026-01-09 05:58:11] 2026-01-09 10:44:56,330 | INFO     | intersect: -1005003265.999432
[2026-01-09 05:58:11] 2026-01-09 10:44:56,330 | INFO     | chi2: 0.769769971731978
[2026-01-09 05:58:11] 2026-01-09 10:44:56,330 | INFO     | current chi2=0.769769971731978 (change=22.365058327704517 %)
[2026-01-09 05:58:11] 2026-01-09 10:44:56,331 | INFO     | left removable region: 20
[2026-01-09 05:58:11] 2026-01-09 10:44:56,331 | INFO     | sum of square deviations: 9060227402.129932
[2026-01-09 05:58:11] 2026-01-09 10:44:56,334 | INFO     | sum of deviations: 11146356135.72727
[2026-01-09 05:58:11] 2026-01-09 10:44:56,334 | INFO     | mean x: 1767945713.3506494
[2026-01-09 05:58:11] 2026-01-09 10:44:56,334 | INFO     | mean y: 2563404.6136363638
[2026-01-09 05:58:11] 2026-01-09 10:44:56,334 | INFO     | intersect: -2172454028.7243056
[2026-01-09 05:58:11] 2026-01-09 10:44:56,334 | INFO     | chi2: 0.0025622702921289995
[2026-01-09 05:58:11] 2026-01-09 10:44:56,335 | INFO     | current memory leak: 1.23 B/s (using 308 data points, chi2=0.00)
[2026-01-09 05:58:11] 2026-01-09 10:44:56,335 | INFO     | could have reported an average CPU frequency of 2653 MHz (15 samples)
[2026-01-09 05:58:11] 2026-01-09 10:44:56,336 | INFO     | ..............................
[2026-01-09 05:58:11] 2026-01-09 10:44:56,336 | INFO     | . Timing measurements:
[2026-01-09 05:58:11] 2026-01-09 10:44:56,336 | INFO     | . get job = 0 s
[2026-01-09 05:58:11] 2026-01-09 10:44:56,336 | INFO     | . initial setup = 6 s
[2026-01-09 05:58:11] 2026-01-09 10:44:56,336 | INFO     | . payload setup = 42 s
[2026-01-09 05:58:11] 2026-01-09 10:44:56,336 | INFO     | . stage-in = 0 s
[2026-01-09 05:58:11] 2026-01-09 10:44:56,336 | INFO     | . payload execution = 20368 s
[2026-01-09 05:58:11] 2026-01-09 10:44:56,336 | INFO     | . stage-out = 2 s
[2026-01-09 05:58:11] 2026-01-09 10:44:56,336 | INFO     | . log creation = 0 s
[2026-01-09 05:58:11] 2026-01-09 10:44:56,336 | INFO     | ..............................
[2026-01-09 05:58:11] 2026-01-09 10:44:56,472 | INFO     | 
[2026-01-09 05:58:11] 2026-01-09 10:44:56,473 | INFO     | job summary report
[2026-01-09 05:58:11] 2026-01-09 10:44:56,473 | INFO     | --------------------------------------------------
[2026-01-09 05:58:11] 2026-01-09 10:44:56,473 | INFO     | PanDA job id: 6963148264
[2026-01-09 05:58:11] 2026-01-09 10:44:56,473 | INFO     | task id: 47898826
[2026-01-09 05:58:11] 2026-01-09 10:44:56,473 | INFO     | errors: (none)
[2026-01-09 05:58:11] 2026-01-09 10:44:56,473 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 05:58:11] 2026-01-09 10:44:56,473 | INFO     | pilot state: finished 
[2026-01-09 05:58:11] 2026-01-09 10:44:56,473 | INFO     | transexitcode: 0
[2026-01-09 05:58:11] 2026-01-09 10:44:56,473 | INFO     | exeerrorcode: 0
[2026-01-09 05:58:11] 2026-01-09 10:44:56,473 | INFO     | exeerrordiag: 
[2026-01-09 05:58:11] 2026-01-09 10:44:56,473 | INFO     | exitcode: 0
[2026-01-09 05:58:11] 2026-01-09 10:44:56,474 | INFO     | exitmsg: OK
[2026-01-09 05:58:11] 2026-01-09 10:44:56,474 | INFO     | cpuconsumptiontime: 61509 s
[2026-01-09 05:58:11] 2026-01-09 10:44:56,474 | INFO     | nevents: 400
[2026-01-09 05:58:11] 2026-01-09 10:44:56,474 | INFO     | neventsw: 0
[2026-01-09 05:58:11] 2026-01-09 10:44:56,474 | INFO     | pid: 86817
[2026-01-09 05:58:11] 2026-01-09 10:44:56,474 | INFO     | pgrp: 86817
[2026-01-09 05:58:11] 2026-01-09 10:44:56,474 | INFO     | corecount: 9
[2026-01-09 05:58:11] 2026-01-09 10:44:56,474 | INFO     | event service: False
[2026-01-09 05:58:11] 2026-01-09 10:44:56,474 | INFO     | sizes: {0: 2283143, 1: 2283828, 2: 2284027, 13: 2284027, 24: 2284083, 31: 2284373, 35: 2284529, 20415: 2317927, 20416: 2317926, 20420: 2326980, 20421: 2327036, 204
[2026-01-09 05:58:11] 2026-01-09 10:44:56,474 | INFO     | --------------------------------------------------
[2026-01-09 05:58:11] 2026-01-09 10:44:56,474 | INFO     | 
[2026-01-09 05:58:11] 2026-01-09 10:44:56,475 | INFO     | executing command: ls -lF /tmp/boinchome/slots/9
[2026-01-09 05:58:11] 2026-01-09 10:44:56,525 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 05:58:11] 2026-01-09 10:44:56,526 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 05:58:11] 2026-01-09 10:44:56,526 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 05:58:11] 2026-01-09 10:44:56,526 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 05:58:11] 2026-01-09 10:44:56,526 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 05:58:11] 2026-01-09 10:44:56,526 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 05:58:11] 2026-01-09 10:44:56,526 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 05:58:11] 2026-01-09 10:44:56,526 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 05:58:11] 2026-01-09 10:44:56,526 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 05:58:11] 2026-01-09 10:44:56,526 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 05:58:11] 2026-01-09 10:44:56,527 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 05:58:11] 2026-01-09 10:44:56,527 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 05:58:11] 2026-01-09 10:44:56,527 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 05:58:11] 2026-01-09 10:44:56,527 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 05:58:11] 2026-01-09 10:44:56,527 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 05:58:11] 2026-01-09 10:44:56,527 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 05:58:11] 2026-01-09 10:44:56,527 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 05:58:11] 2026-01-09 10:44:56,527 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 05:58:11] 2026-01-09 10:44:56,527 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 05:58:11] 2026-01-09 10:44:56,527 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 05:58:11] 2026-01-09 10:44:56,528 | INFO     | job 6963148264 has completed (purged errors)
[2026-01-09 05:58:11] 2026-01-09 10:44:56,528 | INFO     | overall cleanup function is called
[2026-01-09 05:58:11] 2026-01-09 10:44:57,540 | INFO     | --- collectZombieJob: --- 10, [86817]
[2026-01-09 05:58:11] 2026-01-09 10:44:57,541 | INFO     | zombie collector waiting for pid 86817
[2026-01-09 05:58:11] 2026-01-09 10:44:57,541 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 05:58:11] 2026-01-09 10:44:57,541 | INFO     | collected zombie processes
[2026-01-09 05:58:11] 2026-01-09 10:44:57,541 | INFO     | will attempt to kill all subprocesses of pid=86817
[2026-01-09 05:58:11] 2026-01-09 10:44:58,177 | INFO     | process IDs to be killed: [86817] (in reverse order)
[2026-01-09 05:58:11] 2026-01-09 10:44:58,364 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 05:58:11] 2026-01-09 10:44:58,364 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 05:58:11] 2026-01-09 10:44:58,379 | INFO     | did not find any defunct processes belonging to 86817
[2026-01-09 05:58:11] 2026-01-09 10:44:58,397 | INFO     | did not find any defunct processes belonging to 86817
[2026-01-09 05:58:11] 2026-01-09 10:44:58,397 | INFO     | ready for new job
[2026-01-09 05:58:11] 2026-01-09 10:44:58,397 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 05:58:11] 2026-01-09 10:44:58,399 | INFO     | ***************************************
[2026-01-09 05:58:11] 2026-01-09 10:44:58,400 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 05:58:11] 2026-01-09 10:44:58,400 | INFO     | ***************************************
[2026-01-09 05:58:11] 2026-01-09 10:44:58,400 | INFO     | 
[2026-01-09 05:58:11] 2026-01-09 10:44:58,413 | INFO     | architecture information:
[2026-01-09 05:58:11] 2026-01-09 10:44:58,417 | INFO     | executing command: cat /etc/os-release
[2026-01-09 05:58:11] 2026-01-09 10:44:58,434 | INFO     | cat /etc/os-release:
[2026-01-09 05:58:11] NAME="CentOS Linux"
[2026-01-09 05:58:11] VERSION="7 (Core)"
[2026-01-09 05:58:11] ID="centos"
[2026-01-09 05:58:11] ID_LIKE="rhel fedora"
[2026-01-09 05:58:11] VERSION_ID="7"
[2026-01-09 05:58:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 05:58:11] ANSI_COLOR="0;31"
[2026-01-09 05:58:11] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 05:58:11] HOME_URL="https://www.centos.org/"
[2026-01-09 05:58:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 05:58:11] 
[2026-01-09 05:58:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 05:58:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 05:58:11] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 05:58:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 05:58:11] 
[2026-01-09 05:58:11] 2026-01-09 10:44:58,434 | INFO     | ***************************************
[2026-01-09 05:58:11] 2026-01-09 10:44:58,937 | INFO     | executing command: df -mP /tmp/boinchome/slots/9
[2026-01-09 05:58:11] 2026-01-09 10:44:59,035 | INFO     | sufficient remaining disk space (71924973568 B)
[2026-01-09 05:58:11] 2026-01-09 10:44:59,036 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 05:58:11] 2026-01-09 10:44:59,036 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 05:58:11] 2026-01-09 10:44:59,036 | INFO     | update_server=False
[2026-01-09 05:58:11] 2026-01-09 10:44:59,036 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 05:58:11] 2026-01-09 10:44:59,037 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 05:58:11] 2026-01-09 10:44:59,041 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 05:58:11] 2026-01-09 10:44:59,194 | INFO     | all payload control threads have been joined
[2026-01-09 05:58:11] 2026-01-09 10:44:59,209 | INFO     | all job control threads have been joined
[2026-01-09 05:58:11] 2026-01-09 10:44:59,451 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 05:58:11] 2026-01-09 10:44:59,451 | INFO     | aborting loop
[2026-01-09 05:58:11] 2026-01-09 10:44:59,690 | INFO     | all data control threads have been joined
[2026-01-09 05:58:11] 2026-01-09 10:45:00,042 | INFO     | [job] retrieve thread has finished
[2026-01-09 05:58:11] 2026-01-09 10:45:00,055 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 05:58:11] 2026-01-09 10:45:00,076 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 05:58:11] 2026-01-09 10:45:00,184 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 05:58:11] 2026-01-09 10:45:00,200 | INFO     | [payload] control thread has finished
[2026-01-09 05:58:11] 2026-01-09 10:45:00,215 | INFO     | [job] control thread has finished
[2026-01-09 05:58:11] 2026-01-09 10:45:00,467 | INFO     | [job] job monitor thread has finished
[2026-01-09 05:58:11] 2026-01-09 10:45:00,498 | INFO     | [data] copytool_in thread has finished
[2026-01-09 05:58:11] 2026-01-09 10:45:00,697 | INFO     | [data] control thread has finished
[2026-01-09 05:58:11] 2026-01-09 10:45:00,713 | INFO     | [payload] validate_post thread has finished
[2026-01-09 05:58:11] 2026-01-09 10:45:01,037 | INFO     | [job] validate thread has finished
[2026-01-09 05:58:11] 2026-01-09 10:45:01,048 | INFO     | [data] copytool_out thread has finished
[2026-01-09 05:58:11] 2026-01-09 10:45:01,486 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 05:58:11] 2026-01-09 10:45:01,596 | INFO     | [payload] failed_post thread has finished
[2026-01-09 05:58:11] 2026-01-09 10:45:02,502 | INFO     | [job] queue monitor thread has finished
[2026-01-09 05:58:11] 2026-01-09 10:45:03,059 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 05:58:11] 2026-01-09 10:45:09,480 | INFO     | job.realtimelogging is not enabled
[2026-01-09 05:58:11] 2026-01-09 10:45:10,486 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 05:58:11] 2026-01-09 10:45:29,513 | INFO     | PID=36965 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-09 05:58:11] 2026-01-09 10:45:29,514 | INFO     | .. there are 19 such processes running
[2026-01-09 05:58:11] 2026-01-09 10:45:29,514 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 05:58:11] 2026-01-09 10:45:29,515 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 05:58:11] 2026-01-09 10:45:29,515 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 05:58:11] 2026-01-09 10:45:47,727 | INFO     | [monitor] cgroup control has ended
[2026-01-09 05:58:11] 2026-01-09 10:45:48,998 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139670904059712)>', '<ExcThread(monitor, started 139670541276928)>']
[2026-01-09 05:58:11] 2026-01-09 10:45:49,632 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 05:58:11] 2026-01-09 10:45:49,632 | INFO     | [monitor] control thread has ended
[2026-01-09 05:58:11] 2026-01-09 10:45:54,026 | INFO     | all workflow threads have been joined
[2026-01-09 05:58:11] 2026-01-09 10:45:54,026 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 05:58:11] 2026-01-09 10:45:54,027 | INFO     | traces error code: 0
[2026-01-09 05:58:11] 2026-01-09 10:45:54,027 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 05:58:11] 2026-01-09 10:45:54,210 [wrapper] ==== pilot stdout END ====
[2026-01-09 05:58:11] 2026-01-09 10:45:54,212 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 05:58:11] 2026-01-09 10:45:54,214 [wrapper] pilotpid: 36965
[2026-01-09 05:58:11] 2026-01-09 10:45:54,216 [wrapper] Pilot exit status: 0
[2026-01-09 05:58:11] 2026-01-09 10:45:54,241 [wrapper] pandaids: 6963148264
[2026-01-09 05:58:11] 2026-01-09 10:45:54,381 [wrapper] cleanup supervisor_pilot 1010338 36967
[2026-01-09 05:58:11] 2026-01-09 10:45:54,384 [wrapper] Test setup, not cleaning
[2026-01-09 05:58:11] 2026-01-09 10:45:54,387 [wrapper] apfmon messages muted
[2026-01-09 05:58:11] 2026-01-09 10:45:54,389 [wrapper] ==== wrapper stdout END ====
[2026-01-09 05:58:11] 2026-01-09 10:45:54,391 [wrapper] ==== wrapper stderr END ====
[2026-01-09 05:58:11]  *** Error codes and diagnostics ***
[2026-01-09 05:58:11]     "exeErrorCode": 0,
[2026-01-09 05:58:11]     "exeErrorDiag": "",
[2026-01-09 05:58:11]     "pilotErrorCode": 0,
[2026-01-09 05:58:11]     "pilotErrorDiag": "",
[2026-01-09 05:58:11]  *** Listing of results directory ***
[2026-01-09 05:58:11] total 437664
[2026-01-09 05:58:11] -rw-r--r-- 1 boincer umatlas    579449 Jan  8 11:02 pilot3.tar.gz
[2026-01-09 05:58:11] -rwx------ 1 boincer umatlas     36322 Jan  8 11:05 runpilot2-wrapper.sh
[2026-01-09 05:58:11] -rw-r--r-- 1 boincer umatlas      5112 Jan  8 11:07 queuedata.json
[2026-01-09 05:58:11] -rw-r--r-- 1 boincer umatlas       100 Jan  9 00:02 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 05:58:11] -rwxr-xr-x 1 boincer umatlas      7986 Jan  9 00:02 run_atlas
[2026-01-09 05:58:11] -rw-r--r-- 1 boincer umatlas       105 Jan  9 00:02 job.xml
[2026-01-09 05:58:11] -rw-r--r-- 2 boincer umatlas 221863734 Jan  9 00:02 EVNT.47898824._001102.pool.root.1
[2026-01-09 05:58:11] -rw-r--r-- 2 boincer umatlas     15847 Jan  9 00:02 start_atlas.sh
[2026-01-09 05:58:11] drwxrwx--x 2 boincer umatlas      4096 Jan  9 00:02 shared
[2026-01-09 05:58:11] -rw-r--r-- 2 boincer umatlas    592404 Jan  9 00:02 input.tar.gz
[2026-01-09 05:58:11] -rw-r--r-- 1 boincer umatlas         0 Jan  9 00:02 boinc_lockfile
[2026-01-09 05:58:11] -rw-r--r-- 1 boincer umatlas      2520 Jan  9 00:02 pandaJob.out
[2026-01-09 05:58:11] -rw------- 1 boincer umatlas        57 Jan  9 00:02 setup.sh.local
[2026-01-09 05:58:11] -rw------- 1 boincer umatlas    989771 Jan  9 00:03 agis_schedconf.cvmfs.json
[2026-01-09 05:58:11] drwx------ 5 boincer umatlas      4096 Jan  9 00:03 pilot3
[2026-01-09 05:58:11] -rw------- 1 boincer umatlas 216159595 Jan  9 05:43 HITS.47898826._027935.pool.root.1
[2026-01-09 05:58:11] -rw-r--r-- 1 boincer umatlas       530 Jan  9 05:43 boinc_task_state.xml
[2026-01-09 05:58:11] -rw------- 1 boincer umatlas      1054 Jan  9 05:44 memory_monitor_summary.json
[2026-01-09 05:58:11] -rw------- 1 boincer umatlas   1516240 Jan  9 05:44 agis_ddmendpoints.agis.ALL.json
[2026-01-09 05:58:11] -rw------- 1 boincer umatlas    549567 Jan  9 05:44 log.47898826._027935.job.log.tgz.1
[2026-01-09 05:58:11] -rw------- 1 boincer umatlas      7825 Jan  9 05:44 heartbeat.json
[2026-01-09 05:58:11] -rw------- 1 boincer umatlas        95 Jan  9 05:45 pilot_heartbeat.json
[2026-01-09 05:58:11] -rw------- 1 boincer umatlas      4894 Jan  9 05:45 pilotlog.txt
[2026-01-09 05:58:11] -rw------- 1 boincer umatlas   2560219 Jan  9 05:45 log.47898826._027935.job.log.1
[2026-01-09 05:58:11] -rw------- 1 boincer umatlas       357 Jan  9 05:45 output.list
[2026-01-09 05:58:11] -rw-r--r-- 1 boincer umatlas       620 Jan  9 05:45 runtime_log
[2026-01-09 05:58:11] -rw------- 1 boincer umatlas   3133440 Jan  9 05:45 result.tar.gz
[2026-01-09 05:58:11] -rw-r--r-- 1 boincer umatlas      9343 Jan  9 05:45 runtime_log.err
[2026-01-09 05:58:11] -rw------- 1 boincer umatlas       655 Jan  9 05:45 l1NNDmDh7x8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmy0kKDmw6VMmm.diag
[2026-01-09 05:58:11] -rw-r--r-- 1 boincer umatlas      6875 Jan  9 05:46 init_data.xml
[2026-01-09 05:58:11] -rw-r--r-- 1 boincer umatlas        27 Jan  9 05:58 wrapper_checkpoint.txt
[2026-01-09 05:58:11] -rw-r--r-- 1 boincer umatlas      8192 Jan  9 05:58 boinc_mmap_file
[2026-01-09 05:58:11] -rw-r--r-- 1 boincer umatlas     21409 Jan  9 05:58 stderr.txt
[2026-01-09 05:58:11] HITS file was successfully produced:
[2026-01-09 05:58:11] -rw------- 1 boincer umatlas 216159595 Jan  9 05:43 shared/HITS.pool.root.1
[2026-01-09 05:58:11]  *** Contents of shared directory: ***
[2026-01-09 05:58:11] total 431424
[2026-01-09 05:58:11] -rw-r--r-- 2 boincer umatlas 221863734 Jan  9 00:02 ATLAS.root_0
[2026-01-09 05:58:11] -rw-r--r-- 2 boincer umatlas     15847 Jan  9 00:02 start_atlas.sh
[2026-01-09 05:58:11] -rw-r--r-- 2 boincer umatlas    592404 Jan  9 00:02 input.tar.gz
[2026-01-09 05:58:11] -rw------- 1 boincer umatlas 216159595 Jan  9 05:43 HITS.pool.root.1
[2026-01-09 05:58:11] -rw------- 1 boincer umatlas   3133440 Jan  9 05:45 result.tar.gz
05:58:13 (22077): run_atlas exited; CPU time 62427.289394
05:58:13 (22077): called boinc_finish(0)

</stderr_txt>
]]>

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