Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:01:22 (3919803): wrapper (7.7.26015): starting
00:01:22 (3919803): wrapper: running run_atlas (--nthreads 11)
[2026-01-09 00:01:22] Arguments: --nthreads 11
[2026-01-09 00:01:22] Threads: 11
[2026-01-09 00:01:22] Checking for CVMFS
[2026-01-09 00:01:23] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 00:01:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 00:01:23] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 00:01:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 00:01:24] 2.13.3.0 6825 22462 177260 154931 2 99 26844394 40960000 8659 16776704 0 16217026 99.649 16698112 44167 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-09 00:01:24] CVMFS is ok
[2026-01-09 00:01:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 00:01:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 00:01:24] Further information can be found at the LHC@home message board.
[2026-01-09 00:01:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 00:01:24] Checking for apptainer binary...
[2026-01-09 00:01:24] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 00:01:24] Running /usr/bin/apptainer --version
[2026-01-09 00:01:24] apptainer version 1.4.5-2.el9
[2026-01-09 00:01:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 00:01:25] c-210-31-2.aglt2.org
[2026-01-09 00:01:25] apptainer works
[2026-01-09 00:01:25] Set ATHENA_PROC_NUMBER=11
[2026-01-09 00:01:25] Set ATHENA_CORE_NUMBER=11
[2026-01-09 00:01:25] Starting ATLAS job with PandaID=6963147443
[2026-01-09 00:01:25] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 14:05:36]  *** The last 200 lines of the pilot log: ***
[2026-01-09 14:05:36] 2026-01-09 19:04:39,548 | INFO     | time since job start (50568s) is within the limit (349056.0s)
[2026-01-09 14:05:36] 2026-01-09 19:04:39,649 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-09 14:05:36] 2026-01-09 19:04:39,657 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2953.6712857142857
[2026-01-09 14:05:36] 2026-01-09 19:04:39,676 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6963147443/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 14:05:36] 2026-01-09 19:04:39,678 | INFO     | extracted standard info from prmon json
[2026-01-09 14:05:36] 2026-01-09 19:04:39,678 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 14:05:36] 2026-01-09 19:04:39,678 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 14:05:36] 2026-01-09 19:04:39,678 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 14:05:36] 2026-01-09 19:04:39,678 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 14:05:36] 2026-01-09 19:04:39,742 | INFO     | fitting pss+swap vs Time
[2026-01-09 14:05:36] 2026-01-09 19:04:39,744 | INFO     | sum of square deviations: 176014741686.4305
[2026-01-09 14:05:36] 2026-01-09 19:04:39,829 | INFO     | sum of deviations: 309187699580.07007
[2026-01-09 14:05:36] 2026-01-09 19:04:39,829 | INFO     | mean x: 1767960181.1280193
[2026-01-09 14:05:36] 2026-01-09 19:04:39,829 | INFO     | mean y: 2638044.1219806764
[2026-01-09 14:05:36] 2026-01-09 19:04:39,829 | INFO     | intersect: -3102962862.4541173
[2026-01-09 14:05:36] 2026-01-09 19:04:39,837 | INFO     | chi2: 2.323200711744999
[2026-01-09 14:05:36] 2026-01-09 19:04:39,839 | INFO     | sum of square deviations: 172845296669.44574
[2026-01-09 14:05:36] 2026-01-09 19:04:39,859 | INFO     | sum of deviations: 362677722399.7532
[2026-01-09 14:05:36] 2026-01-09 19:04:39,859 | INFO     | mean x: 1767960028.6318347
[2026-01-09 14:05:36] 2026-01-09 19:04:39,860 | INFO     | mean y: 2640604.4216281897
[2026-01-09 14:05:36] 2026-01-09 19:04:39,860 | INFO     | intersect: -3707033473.110518
[2026-01-09 14:05:36] 2026-01-09 19:04:39,861 | INFO     | chi2: 1.597808861330613
[2026-01-09 14:05:36] 2026-01-09 19:04:39,861 | INFO     | current chi2=1.597808861330613 (change=31.22381319647284 %)
[2026-01-09 14:05:36] 2026-01-09 19:04:39,862 | INFO     | sum of square deviations: 169714131439.93796
[2026-01-09 14:05:36] 2026-01-09 19:04:40,020 | INFO     | sum of deviations: 358762634967.7323
[2026-01-09 14:05:36] 2026-01-09 19:04:40,020 | INFO     | mean x: 1767959876.135697
[2026-01-09 14:05:36] 2026-01-09 19:04:40,020 | INFO     | mean y: 2640413.759168704
[2026-01-09 14:05:36] 2026-01-09 19:04:40,020 | INFO     | intersect: -3734690934.5389547
[2026-01-09 14:05:36] 2026-01-09 19:04:40,057 | INFO     | chi2: 1.5977782350350793
[2026-01-09 14:05:36] 2026-01-09 19:04:40,058 | INFO     | current chi2=1.5977782350350793 (change=0.0019167684117189336 %)
[2026-01-09 14:05:36] 2026-01-09 19:04:40,058 | INFO     | right removable region: 817
[2026-01-09 14:05:36] 2026-01-09 19:04:40,059 | INFO     | sum of square deviations: 172844979469.44583
[2026-01-09 14:05:36] 2026-01-09 19:04:40,124 | INFO     | sum of deviations: 157601303446.43222
[2026-01-09 14:05:36] 2026-01-09 19:04:40,124 | INFO     | mean x: 1767960333.6318347
[2026-01-09 14:05:36] 2026-01-09 19:04:40,124 | INFO     | mean y: 2645320.9453219925
[2026-01-09 14:05:36] 2026-01-09 19:04:40,124 | INFO     | intersect: -1609393708.9254925
[2026-01-09 14:05:36] 2026-01-09 19:04:40,129 | INFO     | chi2: 0.7978932226406708
[2026-01-09 14:05:36] 2026-01-09 19:04:40,129 | INFO     | current chi2=0.7978932226406708 (change=65.6554331011134 %)
[2026-01-09 14:05:36] 2026-01-09 19:04:40,131 | INFO     | sum of square deviations: 169713597324.47556
[2026-01-09 14:05:36] 2026-01-09 19:04:40,156 | INFO     | sum of deviations: 126805093142.79199
[2026-01-09 14:05:36] 2026-01-09 19:04:40,160 | INFO     | mean x: 1767960486.133252
[2026-01-09 14:05:36] 2026-01-09 19:04:40,161 | INFO     | mean y: 2646817.8826405867
[2026-01-09 14:05:36] 2026-01-09 19:04:40,161 | INFO     | intersect: -1318322141.8895142
[2026-01-09 14:05:36] 2026-01-09 19:04:40,162 | INFO     | chi2: 0.7456178330227209
[2026-01-09 14:05:36] 2026-01-09 19:04:40,162 | INFO     | current chi2=0.7456178330227209 (change=6.551677359151095 %)
[2026-01-09 14:05:36] 2026-01-09 19:04:40,162 | INFO     | left removable region: 20
[2026-01-09 14:05:36] 2026-01-09 19:04:40,163 | INFO     | sum of square deviations: 156974934833.92737
[2026-01-09 14:05:36] 2026-01-09 19:04:40,188 | INFO     | sum of deviations: 150947725881.09015
[2026-01-09 14:05:36] 2026-01-09 19:04:40,188 | INFO     | mean x: 1767960455.6474278
[2026-01-09 14:05:36] 2026-01-09 19:04:40,188 | INFO     | mean y: 2650650.092848181
[2026-01-09 14:05:36] 2026-01-09 19:04:40,192 | INFO     | intersect: -1697427203.164499
[2026-01-09 14:05:36] 2026-01-09 19:04:40,194 | INFO     | chi2: 0.00490583784273411
[2026-01-09 14:05:36] 2026-01-09 19:04:40,194 | INFO     | current memory leak: 0.96 B/s (using 797 data points, chi2=0.00)
[2026-01-09 14:05:36] 2026-01-09 19:04:40,195 | INFO     | could have reported an average CPU frequency of 2966 MHz (31 samples)
[2026-01-09 14:05:36] 2026-01-09 19:04:40,195 | INFO     | ..............................
[2026-01-09 14:05:36] 2026-01-09 19:04:40,195 | INFO     | . Timing measurements:
[2026-01-09 14:05:36] 2026-01-09 19:04:40,195 | INFO     | . get job = 0 s
[2026-01-09 14:05:36] 2026-01-09 19:04:40,195 | INFO     | . initial setup = 3 s
[2026-01-09 14:05:36] 2026-01-09 19:04:40,195 | INFO     | . payload setup = 12 s
[2026-01-09 14:05:36] 2026-01-09 19:04:40,196 | INFO     | . stage-in = 0 s
[2026-01-09 14:05:36] 2026-01-09 19:04:40,196 | INFO     | . payload execution = 50511 s
[2026-01-09 14:05:36] 2026-01-09 19:04:40,196 | INFO     | . stage-out = 3 s
[2026-01-09 14:05:36] 2026-01-09 19:04:40,196 | INFO     | . log creation = 0 s
[2026-01-09 14:05:36] 2026-01-09 19:04:40,196 | INFO     | ..............................
[2026-01-09 14:05:36] 2026-01-09 19:04:40,398 | INFO     | 
[2026-01-09 14:05:36] 2026-01-09 19:04:40,399 | INFO     | job summary report
[2026-01-09 14:05:36] 2026-01-09 19:04:40,399 | INFO     | --------------------------------------------------
[2026-01-09 14:05:36] 2026-01-09 19:04:40,399 | INFO     | PanDA job id: 6963147443
[2026-01-09 14:05:36] 2026-01-09 19:04:40,399 | INFO     | task id: 47898826
[2026-01-09 14:05:36] 2026-01-09 19:04:40,399 | INFO     | errors: (none)
[2026-01-09 14:05:36] 2026-01-09 19:04:40,399 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 14:05:36] 2026-01-09 19:04:40,399 | INFO     | pilot state: finished 
[2026-01-09 14:05:36] 2026-01-09 19:04:40,399 | INFO     | transexitcode: 0
[2026-01-09 14:05:36] 2026-01-09 19:04:40,399 | INFO     | exeerrorcode: 0
[2026-01-09 14:05:36] 2026-01-09 19:04:40,399 | INFO     | exeerrordiag: 
[2026-01-09 14:05:36] 2026-01-09 19:04:40,399 | INFO     | exitcode: 0
[2026-01-09 14:05:36] 2026-01-09 19:04:40,399 | INFO     | exitmsg: OK
[2026-01-09 14:05:36] 2026-01-09 19:04:40,400 | INFO     | cpuconsumptiontime: 56009 s
[2026-01-09 14:05:36] 2026-01-09 19:04:40,400 | INFO     | nevents: 400
[2026-01-09 14:05:36] 2026-01-09 19:04:40,400 | INFO     | neventsw: 0
[2026-01-09 14:05:36] 2026-01-09 19:04:40,400 | INFO     | pid: 3956857
[2026-01-09 14:05:36] 2026-01-09 19:04:40,400 | INFO     | pgrp: 3956857
[2026-01-09 14:05:36] 2026-01-09 19:04:40,400 | INFO     | corecount: 11
[2026-01-09 14:05:36] 2026-01-09 19:04:40,400 | INFO     | event service: False
[2026-01-09 14:05:36] 2026-01-09 19:04:40,400 | INFO     | sizes: {0: 2283798, 1: 2283997, 11: 2284287, 50528: 2331527, 50532: 2340525, 50534: 2340581, 50546: 2340903}
[2026-01-09 14:05:36] 2026-01-09 19:04:40,400 | INFO     | --------------------------------------------------
[2026-01-09 14:05:36] 2026-01-09 19:04:40,400 | INFO     | 
[2026-01-09 14:05:36] 2026-01-09 19:04:40,400 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2026-01-09 14:05:36] 2026-01-09 19:04:40,718 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 14:05:36] 2026-01-09 19:04:40,718 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 14:05:36] 2026-01-09 19:04:40,718 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 14:05:36] 2026-01-09 19:04:40,718 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 14:05:36] 2026-01-09 19:04:40,718 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 14:05:36] 2026-01-09 19:04:40,719 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 14:05:36] 2026-01-09 19:04:40,719 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 14:05:36] 2026-01-09 19:04:40,719 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 14:05:36] 2026-01-09 19:04:40,719 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 14:05:36] 2026-01-09 19:04:40,719 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 14:05:36] 2026-01-09 19:04:40,719 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 14:05:36] 2026-01-09 19:04:40,719 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 14:05:36] 2026-01-09 19:04:40,719 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 14:05:36] 2026-01-09 19:04:40,719 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 14:05:36] 2026-01-09 19:04:40,719 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 14:05:36] 2026-01-09 19:04:40,719 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 14:05:36] 2026-01-09 19:04:40,719 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 14:05:36] 2026-01-09 19:04:40,719 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 14:05:36] 2026-01-09 19:04:40,720 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 14:05:36] 2026-01-09 19:04:40,720 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 14:05:36] 2026-01-09 19:04:40,720 | INFO     | job 6963147443 has completed (purged errors)
[2026-01-09 14:05:36] 2026-01-09 19:04:40,720 | INFO     | overall cleanup function is called
[2026-01-09 14:05:36] 2026-01-09 19:04:41,779 | INFO     | --- collectZombieJob: --- 10, [3956857]
[2026-01-09 14:05:36] 2026-01-09 19:04:41,780 | INFO     | zombie collector waiting for pid 3956857
[2026-01-09 14:05:36] 2026-01-09 19:04:41,780 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 14:05:36] 2026-01-09 19:04:41,780 | INFO     | collected zombie processes
[2026-01-09 14:05:36] 2026-01-09 19:04:41,780 | INFO     | will attempt to kill all subprocesses of pid=3956857
[2026-01-09 14:05:36] 2026-01-09 19:04:42,465 | INFO     | process IDs to be killed: [3956857] (in reverse order)
[2026-01-09 14:05:36] 2026-01-09 19:04:42,561 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 14:05:36] 2026-01-09 19:04:42,562 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 14:05:36] 2026-01-09 19:04:42,572 | INFO     | did not find any defunct processes belonging to 3956857
[2026-01-09 14:05:36] 2026-01-09 19:04:42,580 | INFO     | did not find any defunct processes belonging to 3956857
[2026-01-09 14:05:36] 2026-01-09 19:04:42,581 | INFO     | ready for new job
[2026-01-09 14:05:36] 2026-01-09 19:04:42,581 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 14:05:36] 2026-01-09 19:04:42,585 | INFO     | ***************************************
[2026-01-09 14:05:36] 2026-01-09 19:04:42,585 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 14:05:36] 2026-01-09 19:04:42,585 | INFO     | ***************************************
[2026-01-09 14:05:36] 2026-01-09 19:04:42,585 | INFO     | 
[2026-01-09 14:05:36] 2026-01-09 19:04:42,588 | INFO     | architecture information:
[2026-01-09 14:05:36] 2026-01-09 19:04:42,589 | INFO     | executing command: cat /etc/os-release
[2026-01-09 14:05:36] 2026-01-09 19:04:42,611 | INFO     | cat /etc/os-release:
[2026-01-09 14:05:36] NAME="CentOS Linux"
[2026-01-09 14:05:36] VERSION="7 (Core)"
[2026-01-09 14:05:36] ID="centos"
[2026-01-09 14:05:36] ID_LIKE="rhel fedora"
[2026-01-09 14:05:36] VERSION_ID="7"
[2026-01-09 14:05:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 14:05:36] ANSI_COLOR="0;31"
[2026-01-09 14:05:36] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 14:05:36] HOME_URL="https://www.centos.org/"
[2026-01-09 14:05:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 14:05:36] 
[2026-01-09 14:05:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 14:05:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 14:05:36] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 14:05:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 14:05:36] 
[2026-01-09 14:05:36] 2026-01-09 19:04:42,611 | INFO     | ***************************************
[2026-01-09 14:05:36] 2026-01-09 19:04:43,116 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2026-01-09 14:05:36] 2026-01-09 19:04:43,213 | INFO     | sufficient remaining disk space (73840721920 B)
[2026-01-09 14:05:36] 2026-01-09 19:04:43,213 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 14:05:36] 2026-01-09 19:04:43,213 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 14:05:36] 2026-01-09 19:04:43,214 | INFO     | update_server=False
[2026-01-09 14:05:36] 2026-01-09 19:04:43,214 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 14:05:36] 2026-01-09 19:04:43,214 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 14:05:36] 2026-01-09 19:04:43,216 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 14:05:36] 2026-01-09 19:04:43,217 | INFO     | aborting loop
[2026-01-09 14:05:36] 2026-01-09 19:04:43,316 | INFO     | all payload control threads have been joined
[2026-01-09 14:05:36] 2026-01-09 19:04:44,073 | INFO     | all data control threads have been joined
[2026-01-09 14:05:36] 2026-01-09 19:04:44,097 | INFO     | all job control threads have been joined
[2026-01-09 14:05:36] 2026-01-09 19:04:44,219 | INFO     | [job] retrieve thread has finished
[2026-01-09 14:05:36] 2026-01-09 19:04:44,222 | INFO     | [job] job monitor thread has finished
[2026-01-09 14:05:36] 2026-01-09 19:04:44,244 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 14:05:36] 2026-01-09 19:04:44,259 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 14:05:36] 2026-01-09 19:04:44,322 | INFO     | [payload] control thread has finished
[2026-01-09 14:05:36] 2026-01-09 19:04:44,372 | INFO     | [payload] validate_post thread has finished
[2026-01-09 14:05:36] 2026-01-09 19:04:44,611 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 14:05:36] 2026-01-09 19:04:44,740 | INFO     | [job] validate thread has finished
[2026-01-09 14:05:36] 2026-01-09 19:04:44,966 | INFO     | [payload] failed_post thread has finished
[2026-01-09 14:05:36] 2026-01-09 19:04:45,079 | INFO     | [data] control thread has finished
[2026-01-09 14:05:36] 2026-01-09 19:04:45,110 | INFO     | [job] control thread has finished
[2026-01-09 14:05:36] 2026-01-09 19:04:45,172 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 14:05:36] 2026-01-09 19:04:45,439 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 14:05:36] 2026-01-09 19:04:45,457 | INFO     | [data] copytool_in thread has finished
[2026-01-09 14:05:36] 2026-01-09 19:04:46,266 | INFO     | [data] copytool_out thread has finished
[2026-01-09 14:05:36] 2026-01-09 19:04:46,449 | INFO     | [job] queue monitor thread has finished
[2026-01-09 14:05:36] 2026-01-09 19:04:47,222 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 14:05:36] 2026-01-09 19:04:54,268 | INFO     | job.realtimelogging is not enabled
[2026-01-09 14:05:36] 2026-01-09 19:04:55,274 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 14:05:36] 2026-01-09 19:05:13,077 | INFO     | PID=3928580 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 14:05:36] 2026-01-09 19:05:13,077 | INFO     | .. there are 9 such processes running
[2026-01-09 14:05:36] 2026-01-09 19:05:13,077 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 14:05:36] 2026-01-09 19:05:13,077 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 14:05:36] 2026-01-09 19:05:13,077 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 14:05:36] 2026-01-09 19:05:28,330 | INFO     | [monitor] cgroup control has ended
[2026-01-09 14:05:36] 2026-01-09 19:05:29,373 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140237553813312)>', '<ExcThread(monitor, started 140237174986496)>']
[2026-01-09 14:05:36] 2026-01-09 19:05:30,211 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 14:05:36] 2026-01-09 19:05:30,212 | INFO     | [monitor] control thread has ended
[2026-01-09 14:05:36] 2026-01-09 19:05:34,401 | INFO     | all workflow threads have been joined
[2026-01-09 14:05:36] 2026-01-09 19:05:34,402 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 14:05:36] 2026-01-09 19:05:34,402 | INFO     | traces error code: 0
[2026-01-09 14:05:36] 2026-01-09 19:05:34,402 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 14:05:36] 2026-01-09 19:05:34,658 [wrapper] ==== pilot stdout END ====
[2026-01-09 14:05:36] 2026-01-09 19:05:34,670 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 14:05:36] 2026-01-09 19:05:34,685 [wrapper] pilotpid: 3928580
[2026-01-09 14:05:36] 2026-01-09 19:05:34,698 [wrapper] Pilot exit status: 0
[2026-01-09 14:05:36] 2026-01-09 19:05:34,751 [wrapper] pandaids: 6963147443
[2026-01-09 14:05:36] 2026-01-09 19:05:35,322 [wrapper] cleanup supervisor_pilot 1141604 3928581
[2026-01-09 14:05:36] 2026-01-09 19:05:35,366 [wrapper] Test setup, not cleaning
[2026-01-09 14:05:36] 2026-01-09 19:05:35,529 [wrapper] apfmon messages muted
[2026-01-09 14:05:36] 2026-01-09 19:05:35,557 [wrapper] ==== wrapper stdout END ====
[2026-01-09 14:05:36] 2026-01-09 19:05:35,732 [wrapper] ==== wrapper stderr END ====
[2026-01-09 14:05:36]  *** Error codes and diagnostics ***
[2026-01-09 14:05:36]     "exeErrorCode": 0,
[2026-01-09 14:05:36]     "exeErrorDiag": "",
[2026-01-09 14:05:36]     "pilotErrorCode": 0,
[2026-01-09 14:05:36]     "pilotErrorDiag": "",
[2026-01-09 14:05:36]  *** Listing of results directory ***
[2026-01-09 14:05:36] total 452852
[2026-01-09 14:05:36] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 11:02 pilot3.tar.gz
[2026-01-09 14:05:36] -rwx------. 1 boincer umatlas     36322 Jan  8 11:05 runpilot2-wrapper.sh
[2026-01-09 14:05:36] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 11:07 queuedata.json
[2026-01-09 14:05:36] -rw-r--r--. 1 boincer umatlas       100 Jan  9 00:01 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 14:05:36] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 00:01 run_atlas
[2026-01-09 14:05:36] -rw-r--r--. 1 boincer umatlas       105 Jan  9 00:01 job.xml
[2026-01-09 14:05:36] -rw-r--r--. 2 boincer umatlas 223505484 Jan  9 00:01 EVNT.47898824._000811.pool.root.1
[2026-01-09 14:05:36] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 00:01 shared
[2026-01-09 14:05:36] -rw-r--r--. 2 boincer umatlas    592399 Jan  9 00:01 input.tar.gz
[2026-01-09 14:05:36] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 00:01 start_atlas.sh
[2026-01-09 14:05:36] -rw-r--r--. 1 boincer umatlas         0 Jan  9 00:01 boinc_lockfile
[2026-01-09 14:05:36] -rw-r--r--. 1 boincer umatlas      2519 Jan  9 00:01 pandaJob.out
[2026-01-09 14:05:36] -rw-------. 1 boincer umatlas        57 Jan  9 00:01 setup.sh.local
[2026-01-09 14:05:36] -rw-------. 1 boincer umatlas    989771 Jan  9 00:01 agis_schedconf.cvmfs.json
[2026-01-09 14:05:36] drwx------. 5 boincer umatlas      4096 Jan  9 00:01 pilot3
[2026-01-09 14:05:36] -rw-r--r--. 1 boincer umatlas      6842 Jan  9 14:02 init_data.xml
[2026-01-09 14:05:36] -rw-------. 1 boincer umatlas 222231385 Jan  9 14:02 HITS.47898826._027638.pool.root.1
[2026-01-09 14:05:36] -rw-r--r--. 1 boincer umatlas       530 Jan  9 14:03 boinc_task_state.xml
[2026-01-09 14:05:36] -rw-------. 1 boincer umatlas      1039 Jan  9 14:04 memory_monitor_summary.json
[2026-01-09 14:05:36] -rw-------. 1 boincer umatlas   1516240 Jan  9 14:04 agis_ddmendpoints.agis.ALL.json
[2026-01-09 14:05:36] -rw-------. 1 boincer umatlas    955166 Jan  9 14:04 log.47898826._027638.job.log.tgz.1
[2026-01-09 14:05:36] -rw-------. 1 boincer umatlas        95 Jan  9 14:04 pilot_heartbeat.json
[2026-01-09 14:05:36] -rw-------. 1 boincer umatlas      7824 Jan  9 14:04 heartbeat.json
[2026-01-09 14:05:36] -rw-------. 1 boincer umatlas      4895 Jan  9 14:05 pilotlog.txt
[2026-01-09 14:05:36] -rw-r--r--. 1 boincer umatlas        28 Jan  9 14:05 wrapper_checkpoint.txt
[2026-01-09 14:05:36] -rw-r--r--. 1 boincer umatlas      8192 Jan  9 14:05 boinc_mmap_file
[2026-01-09 14:05:36] -rw-------. 1 boincer umatlas   6076956 Jan  9 14:05 log.47898826._027638.job.log.1
[2026-01-09 14:05:36] -rw-------. 1 boincer umatlas       357 Jan  9 14:05 output.list
[2026-01-09 14:05:36] -rw-r--r--. 1 boincer umatlas       620 Jan  9 14:05 runtime_log
[2026-01-09 14:05:36] -rw-------. 1 boincer umatlas   7055360 Jan  9 14:05 result.tar.gz
[2026-01-09 14:05:36] -rw-r--r--. 1 boincer umatlas      9355 Jan  9 14:05 runtime_log.err
[2026-01-09 14:05:36] -rw-------. 1 boincer umatlas       660 Jan  9 14:05 23TMDm1g7x8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmwzkKDmRqpHVo.diag
[2026-01-09 14:05:36] -rw-r--r--. 1 boincer umatlas     20911 Jan  9 14:05 stderr.txt
[2026-01-09 14:05:36] HITS file was successfully produced:
[2026-01-09 14:05:36] -rw-------. 1 boincer umatlas 222231385 Jan  9 14:02 shared/HITS.pool.root.1
[2026-01-09 14:05:36]  *** Contents of shared directory: ***
[2026-01-09 14:05:36] total 442784
[2026-01-09 14:05:36] -rw-r--r--. 2 boincer umatlas 223505484 Jan  9 00:01 ATLAS.root_0
[2026-01-09 14:05:36] -rw-r--r--. 2 boincer umatlas    592399 Jan  9 00:01 input.tar.gz
[2026-01-09 14:05:36] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 00:01 start_atlas.sh
[2026-01-09 14:05:36] -rw-------. 1 boincer umatlas 222231385 Jan  9 14:02 HITS.pool.root.1
[2026-01-09 14:05:36] -rw-------. 1 boincer umatlas   7055360 Jan  9 14:05 result.tar.gz
14:05:37 (3919803): run_atlas exited; CPU time 57211.968343
14:05:37 (3919803): called boinc_finish(0)

</stderr_txt>
]]>

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