Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
05:46:11 (1194618): wrapper (7.7.26015): starting
05:46:11 (1194618): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 05:46:11] Arguments: --nthreads 8
[2026-01-09 05:46:11] Threads: 8
[2026-01-09 05:46:11] Checking for CVMFS
[2026-01-09 05:46:12] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 05:46:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 05:46:13] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 05:46:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 05:46:14] 2.13.3.0 11250 93308 338244 154940 0 115 30166474 32935937 16672 16776704 0 262474223 99.451 383470939 39961 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-09 05:46:14] CVMFS is ok
[2026-01-09 05:46:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 05:46:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 05:46:14] Further information can be found at the LHC@home message board.
[2026-01-09 05:46:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 05:46:14] Checking for apptainer binary...
[2026-01-09 05:46:14] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 05:46:14] Running /usr/bin/apptainer --version
[2026-01-09 05:46:16] apptainer version 1.4.5-2.el9
[2026-01-09 05:46:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 05:46:36] c6-2-29-1.aglt2.org
[2026-01-09 05:46:36] apptainer works
[2026-01-09 05:46:36] Set ATHENA_PROC_NUMBER=8
[2026-01-09 05:46:36] Set ATHENA_CORE_NUMBER=8
[2026-01-09 05:46:36] Starting ATLAS job with PandaID=6963152326
[2026-01-09 05:46:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 12:36:52]  *** The last 200 lines of the pilot log: ***
[2026-01-09 12:36:52] 2026-01-09 17:36:04,554 | INFO     | time since job start (24543s) is within the limit (349056.0s)
[2026-01-09 12:36:52] 2026-01-09 17:36:05,537 | INFO     | monitor loop #1574: job 0:6963152326 is in state 'finished'
[2026-01-09 12:36:52] 2026-01-09 17:36:05,539 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 12:36:52] 2026-01-09 17:36:06,572 | INFO     | time since job start (24545s) is within the limit (349056.0s)
[2026-01-09 12:36:52] 2026-01-09 17:36:08,042 | INFO     | monitor loop #1575: job 0:6963152326 is in state 'finished'
[2026-01-09 12:36:52] 2026-01-09 17:36:08,042 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 12:36:52] 2026-01-09 17:36:08,579 | INFO     | time since job start (24547s) is within the limit (349056.0s)
[2026-01-09 12:36:52] 2026-01-09 17:36:09,497 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-09 12:36:52] 2026-01-09 17:36:09,501 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2958.8573571428574
[2026-01-09 12:36:52] 2026-01-09 17:36:09,541 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6963152326/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 12:36:52] 2026-01-09 17:36:09,542 | INFO     | extracted standard info from prmon json
[2026-01-09 12:36:52] 2026-01-09 17:36:09,542 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 12:36:52] 2026-01-09 17:36:09,542 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 12:36:52] 2026-01-09 17:36:09,548 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 12:36:52] 2026-01-09 17:36:09,548 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 12:36:52] 2026-01-09 17:36:09,564 | INFO     | fitting pss+swap vs Time
[2026-01-09 12:36:52] 2026-01-09 17:36:09,564 | INFO     | sum of square deviations: 19994784324.817974
[2026-01-09 12:36:52] 2026-01-09 17:36:09,572 | INFO     | sum of deviations: 243927537666.31653
[2026-01-09 12:36:52] 2026-01-09 17:36:09,572 | INFO     | mean x: 1767967871.6533666
[2026-01-09 12:36:52] 2026-01-09 17:36:09,572 | INFO     | mean y: 2462410.246882793
[2026-01-09 12:36:52] 2026-01-09 17:36:09,572 | INFO     | intersect: -21565964765.548126
[2026-01-09 12:36:52] 2026-01-09 17:36:09,573 | INFO     | chi2: 2.2040454159585665
[2026-01-09 12:36:52] 2026-01-09 17:36:09,574 | INFO     | sum of square deviations: 19256202788.9774
[2026-01-09 12:36:52] 2026-01-09 17:36:09,582 | INFO     | sum of deviations: 239201805705.06836
[2026-01-09 12:36:52] 2026-01-09 17:36:09,582 | INFO     | mean x: 1767967719.159091
[2026-01-09 12:36:52] 2026-01-09 17:36:09,582 | INFO     | mean y: 2461435.967171717
[2026-01-09 12:36:52] 2026-01-09 17:36:09,582 | INFO     | intersect: -21959348765.42944
[2026-01-09 12:36:52] 2026-01-09 17:36:09,582 | INFO     | chi2: 2.201309121473866
[2026-01-09 12:36:52] 2026-01-09 17:36:09,583 | INFO     | current chi2=2.201309121473866 (change=0.12414873418162521 %)
[2026-01-09 12:36:52] 2026-01-09 17:36:09,583 | INFO     | right removable region: 395
[2026-01-09 12:36:52] 2026-01-09 17:36:09,583 | INFO     | sum of square deviations: 19256067307.656624
[2026-01-09 12:36:52] 2026-01-09 17:36:09,606 | INFO     | sum of deviations: 173198426112.76794
[2026-01-09 12:36:52] 2026-01-09 17:36:09,606 | INFO     | mean x: 1767968024.161616
[2026-01-09 12:36:52] 2026-01-09 17:36:09,606 | INFO     | mean y: 2476959.8005050505
[2026-01-09 12:36:52] 2026-01-09 17:36:09,606 | INFO     | intersect: -15899486525.79329
[2026-01-09 12:36:52] 2026-01-09 17:36:09,606 | INFO     | chi2: 0.765861250234789
[2026-01-09 12:36:52] 2026-01-09 17:36:09,607 | INFO     | current chi2=0.765861250234789 (change=65.2520204579493 %)
[2026-01-09 12:36:52] 2026-01-09 17:36:09,612 | INFO     | sum of square deviations: 18535769240.439854
[2026-01-09 12:36:52] 2026-01-09 17:36:09,615 | INFO     | sum of deviations: 151228129969.59607
[2026-01-09 12:36:52] 2026-01-09 17:36:09,620 | INFO     | mean x: 1767968176.6700766
[2026-01-09 12:36:52] 2026-01-09 17:36:09,620 | INFO     | mean y: 2481611.8030690537
[2026-01-09 12:36:52] 2026-01-09 17:36:09,620 | INFO     | intersect: -14421873683.916372
[2026-01-09 12:36:52] 2026-01-09 17:36:09,621 | INFO     | chi2: 0.7000313848529286
[2026-01-09 12:36:52] 2026-01-09 17:36:09,621 | INFO     | current chi2=0.7000313848529286 (change=8.59553415996423 %)
[2026-01-09 12:36:52] 2026-01-09 17:36:09,621 | INFO     | left removable region: 20
[2026-01-09 12:36:52] 2026-01-09 17:36:09,622 | INFO     | sum of square deviations: 16352050485.344069
[2026-01-09 12:36:52] 2026-01-09 17:36:09,644 | INFO     | sum of deviations: 127483693587.98401
[2026-01-09 12:36:52] 2026-01-09 17:36:09,644 | INFO     | mean x: 1767968298.696
[2026-01-09 12:36:52] 2026-01-09 17:36:09,644 | INFO     | mean y: 2485177.456
[2026-01-09 12:36:52] 2026-01-09 17:36:09,644 | INFO     | intersect: -13780931713.669617
[2026-01-09 12:36:52] 2026-01-09 17:36:09,645 | INFO     | chi2: 0.6634012834166543
[2026-01-09 12:36:52] 2026-01-09 17:36:09,645 | INFO     | current memory leak: 7.80 B/s (using 375 data points, chi2=0.66)
[2026-01-09 12:36:52] 2026-01-09 17:36:09,645 | INFO     | could have reported an average CPU frequency of 2940 MHz (17 samples)
[2026-01-09 12:36:52] 2026-01-09 17:36:09,646 | INFO     | ..............................
[2026-01-09 12:36:52] 2026-01-09 17:36:09,646 | INFO     | . Timing measurements:
[2026-01-09 12:36:52] 2026-01-09 17:36:09,665 | INFO     | . get job = 0 s
[2026-01-09 12:36:52] 2026-01-09 17:36:09,665 | INFO     | . initial setup = 2 s
[2026-01-09 12:36:52] 2026-01-09 17:36:09,665 | INFO     | . payload setup = 10 s
[2026-01-09 12:36:52] 2026-01-09 17:36:09,665 | INFO     | . stage-in = 0 s
[2026-01-09 12:36:52] 2026-01-09 17:36:09,665 | INFO     | . payload execution = 24467 s
[2026-01-09 12:36:52] 2026-01-09 17:36:09,665 | INFO     | . stage-out = 5 s
[2026-01-09 12:36:52] 2026-01-09 17:36:09,665 | INFO     | . log creation = 0 s
[2026-01-09 12:36:52] 2026-01-09 17:36:09,666 | INFO     | ..............................
[2026-01-09 12:36:52] 2026-01-09 17:36:09,862 | INFO     | 
[2026-01-09 12:36:52] 2026-01-09 17:36:09,862 | INFO     | job summary report
[2026-01-09 12:36:52] 2026-01-09 17:36:09,862 | INFO     | --------------------------------------------------
[2026-01-09 12:36:52] 2026-01-09 17:36:09,862 | INFO     | PanDA job id: 6963152326
[2026-01-09 12:36:52] 2026-01-09 17:36:09,862 | INFO     | task id: 47898826
[2026-01-09 12:36:52] 2026-01-09 17:36:09,863 | INFO     | errors: (none)
[2026-01-09 12:36:52] 2026-01-09 17:36:09,863 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 12:36:52] 2026-01-09 17:36:09,863 | INFO     | pilot state: finished 
[2026-01-09 12:36:52] 2026-01-09 17:36:09,863 | INFO     | transexitcode: 0
[2026-01-09 12:36:52] 2026-01-09 17:36:09,863 | INFO     | exeerrorcode: 0
[2026-01-09 12:36:52] 2026-01-09 17:36:09,863 | INFO     | exeerrordiag: 
[2026-01-09 12:36:52] 2026-01-09 17:36:09,863 | INFO     | exitcode: 0
[2026-01-09 12:36:52] 2026-01-09 17:36:09,863 | INFO     | exitmsg: OK
[2026-01-09 12:36:52] 2026-01-09 17:36:09,863 | INFO     | cpuconsumptiontime: 55943 s
[2026-01-09 12:36:52] 2026-01-09 17:36:09,863 | INFO     | nevents: 400
[2026-01-09 12:36:52] 2026-01-09 17:36:09,863 | INFO     | neventsw: 0
[2026-01-09 12:36:52] 2026-01-09 17:36:09,863 | INFO     | pid: 1205976
[2026-01-09 12:36:52] 2026-01-09 17:36:09,863 | INFO     | pgrp: 1205976
[2026-01-09 12:36:52] 2026-01-09 17:36:09,863 | INFO     | corecount: 8
[2026-01-09 12:36:52] 2026-01-09 17:36:09,864 | INFO     | event service: False
[2026-01-09 12:36:52] 2026-01-09 17:36:09,864 | INFO     | sizes: {0: 2283799, 1: 2283998, 12: 2284288, 22: 2284288, 24482: 2319439, 24483: 2319438, 24490: 2328620, 24493: 2328676, 24519: 2328934}
[2026-01-09 12:36:52] 2026-01-09 17:36:09,864 | INFO     | --------------------------------------------------
[2026-01-09 12:36:52] 2026-01-09 17:36:09,864 | INFO     | 
[2026-01-09 12:36:52] 2026-01-09 17:36:09,864 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-09 12:36:52] 2026-01-09 17:36:09,932 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 12:36:52] 2026-01-09 17:36:09,933 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 12:36:52] 2026-01-09 17:36:09,933 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 12:36:52] 2026-01-09 17:36:09,933 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 12:36:52] 2026-01-09 17:36:09,933 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 12:36:52] 2026-01-09 17:36:09,933 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 12:36:52] 2026-01-09 17:36:09,933 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 12:36:52] 2026-01-09 17:36:09,933 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 12:36:52] 2026-01-09 17:36:09,933 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 12:36:52] 2026-01-09 17:36:09,933 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 12:36:52] 2026-01-09 17:36:09,933 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 12:36:52] 2026-01-09 17:36:09,933 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 12:36:52] 2026-01-09 17:36:09,933 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 12:36:52] 2026-01-09 17:36:09,933 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 12:36:52] 2026-01-09 17:36:09,933 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 12:36:52] 2026-01-09 17:36:09,934 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 12:36:52] 2026-01-09 17:36:09,934 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 12:36:52] 2026-01-09 17:36:09,934 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 12:36:52] 2026-01-09 17:36:09,934 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 12:36:52] 2026-01-09 17:36:09,934 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 12:36:52] 2026-01-09 17:36:09,934 | INFO     | job 6963152326 has completed (purged errors)
[2026-01-09 12:36:52] 2026-01-09 17:36:09,934 | INFO     | overall cleanup function is called
[2026-01-09 12:36:52] 2026-01-09 17:36:10,947 | INFO     | --- collectZombieJob: --- 10, [1205976]
[2026-01-09 12:36:52] 2026-01-09 17:36:10,953 | INFO     | zombie collector waiting for pid 1205976
[2026-01-09 12:36:52] 2026-01-09 17:36:10,976 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 12:36:52] 2026-01-09 17:36:10,976 | INFO     | collected zombie processes
[2026-01-09 12:36:52] 2026-01-09 17:36:10,977 | INFO     | will attempt to kill all subprocesses of pid=1205976
[2026-01-09 12:36:52] 2026-01-09 17:36:12,100 | INFO     | process IDs to be killed: [1205976] (in reverse order)
[2026-01-09 12:36:52] 2026-01-09 17:36:12,306 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 12:36:52] 2026-01-09 17:36:12,307 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 12:36:52] 2026-01-09 17:36:12,319 | INFO     | did not find any defunct processes belonging to 1205976
[2026-01-09 12:36:52] 2026-01-09 17:36:12,331 | INFO     | did not find any defunct processes belonging to 1205976
[2026-01-09 12:36:52] 2026-01-09 17:36:12,332 | INFO     | ready for new job
[2026-01-09 12:36:52] 2026-01-09 17:36:12,332 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 12:36:52] 2026-01-09 17:36:12,335 | INFO     | ***************************************
[2026-01-09 12:36:52] 2026-01-09 17:36:12,335 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 12:36:52] 2026-01-09 17:36:12,335 | INFO     | ***************************************
[2026-01-09 12:36:52] 2026-01-09 17:36:12,335 | INFO     | 
[2026-01-09 12:36:52] 2026-01-09 17:36:12,338 | INFO     | architecture information:
[2026-01-09 12:36:52] 2026-01-09 17:36:12,339 | INFO     | executing command: cat /etc/os-release
[2026-01-09 12:36:52] 2026-01-09 17:36:12,359 | INFO     | cat /etc/os-release:
[2026-01-09 12:36:52] NAME="CentOS Linux"
[2026-01-09 12:36:52] VERSION="7 (Core)"
[2026-01-09 12:36:52] ID="centos"
[2026-01-09 12:36:52] ID_LIKE="rhel fedora"
[2026-01-09 12:36:52] VERSION_ID="7"
[2026-01-09 12:36:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 12:36:52] ANSI_COLOR="0;31"
[2026-01-09 12:36:52] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 12:36:52] HOME_URL="https://www.centos.org/"
[2026-01-09 12:36:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 12:36:52] 
[2026-01-09 12:36:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 12:36:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 12:36:52] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 12:36:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 12:36:52] 
[2026-01-09 12:36:52] 2026-01-09 17:36:12,360 | INFO     | ***************************************
[2026-01-09 12:36:52] 2026-01-09 17:36:12,863 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-09 12:36:52] 2026-01-09 17:36:13,053 | INFO     | sufficient remaining disk space (74908172288 B)
[2026-01-09 12:36:52] 2026-01-09 17:36:13,054 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 12:36:52] 2026-01-09 17:36:13,054 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 12:36:52] 2026-01-09 17:36:13,054 | INFO     | update_server=False
[2026-01-09 12:36:52] 2026-01-09 17:36:13,054 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 12:36:52] 2026-01-09 17:36:13,055 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 12:36:52] 2026-01-09 17:36:13,090 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-09 12:36:52] 2026-01-09 17:36:13,090 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-09 12:36:52] 2026-01-09 17:36:13,090 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 12:36:52] 2026-01-09 17:36:13,091 | INFO     | will abort loop
[2026-01-09 12:36:52] 2026-01-09 17:36:13,145 | INFO     | all data control threads have been joined
[2026-01-09 12:36:52] 2026-01-09 17:36:13,952 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 12:36:52] 2026-01-09 17:36:14,061 | INFO     | [job] retrieve thread has finished
[2026-01-09 12:36:52] 2026-01-09 17:36:14,087 | INFO     | all payload control threads have been joined
[2026-01-09 12:36:52] 2026-01-09 17:36:14,096 | INFO     | [job] job monitor thread has finished
[2026-01-09 12:36:52] 2026-01-09 17:36:14,101 | INFO     | [job] validate thread has finished
[2026-01-09 12:36:52] 2026-01-09 17:36:14,123 | INFO     | [payload] validate_post thread has finished
[2026-01-09 12:36:52] 2026-01-09 17:36:14,151 | INFO     | [data] control thread has finished
[2026-01-09 12:36:52] 2026-01-09 17:36:14,211 | INFO     | [data] copytool_in thread has finished
[2026-01-09 12:36:52] 2026-01-09 17:36:14,220 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 12:36:52] 2026-01-09 17:36:14,399 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 12:36:52] 2026-01-09 17:36:14,478 | INFO     | all job control threads have been joined
[2026-01-09 12:36:52] 2026-01-09 17:36:14,818 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 12:36:52] 2026-01-09 17:36:14,923 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 12:36:52] 2026-01-09 17:36:15,093 | INFO     | [payload] control thread has finished
[2026-01-09 12:36:52] 2026-01-09 17:36:15,316 | INFO     | [payload] failed_post thread has finished
[2026-01-09 12:36:52] 2026-01-09 17:36:15,427 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 12:36:52] 2026-01-09 17:36:15,485 | INFO     | [job] control thread has finished
[2026-01-09 12:36:52] 2026-01-09 17:36:15,929 | INFO     | [job] queue monitor thread has finished
[2026-01-09 12:36:52] 2026-01-09 17:36:15,959 | INFO     | [data] copytool_out thread has finished
[2026-01-09 12:36:52] 2026-01-09 17:36:17,075 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 12:36:52] 2026-01-09 17:36:44,463 | INFO     | PID=1199192 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 12:36:52] 2026-01-09 17:36:44,466 | INFO     | .. there are 17 such processes running
[2026-01-09 12:36:52] 2026-01-09 17:36:44,468 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 12:36:52] 2026-01-09 17:36:44,468 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 12:36:52] 2026-01-09 17:36:44,468 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 12:36:52] 2026-01-09 17:36:44,599 | INFO     | [monitor] cgroup control has ended
[2026-01-09 12:36:52] 2026-01-09 17:36:45,586 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140518155622208)>', '<ExcThread(monitor, started 140517421602560)>']
[2026-01-09 12:36:52] 2026-01-09 17:36:46,480 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 12:36:52] 2026-01-09 17:36:46,480 | INFO     | [monitor] control thread has ended
[2026-01-09 12:36:52] 2026-01-09 17:36:50,612 | INFO     | all workflow threads have been joined
[2026-01-09 12:36:52] 2026-01-09 17:36:50,612 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 12:36:52] 2026-01-09 17:36:50,612 | INFO     | traces error code: 0
[2026-01-09 12:36:52] 2026-01-09 17:36:50,613 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 12:36:52] 2026-01-09 17:36:51,426 [wrapper] ==== pilot stdout END ====
[2026-01-09 12:36:52] 2026-01-09 17:36:51,454 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 12:36:52] 2026-01-09 17:36:51,479 [wrapper] pilotpid: 1199192
[2026-01-09 12:36:52] 2026-01-09 17:36:51,495 [wrapper] Pilot exit status: 0
[2026-01-09 12:36:52] 2026-01-09 17:36:51,577 [wrapper] pandaids: 6963152326
[2026-01-09 12:36:52] 2026-01-09 17:36:51,862 [wrapper] cleanup supervisor_pilot 2313568 1199193
[2026-01-09 12:36:52] 2026-01-09 17:36:51,883 [wrapper] Test setup, not cleaning
[2026-01-09 12:36:52] 2026-01-09 17:36:51,922 [wrapper] apfmon messages muted
[2026-01-09 12:36:52] 2026-01-09 17:36:51,925 [wrapper] ==== wrapper stdout END ====
[2026-01-09 12:36:52] 2026-01-09 17:36:51,934 [wrapper] ==== wrapper stderr END ====
[2026-01-09 12:36:52]  *** Error codes and diagnostics ***
[2026-01-09 12:36:52]     "exeErrorCode": 0,
[2026-01-09 12:36:52]     "exeErrorDiag": "",
[2026-01-09 12:36:52]     "pilotErrorCode": 0,
[2026-01-09 12:36:52]     "pilotErrorDiag": "",
[2026-01-09 12:36:52]  *** Listing of results directory ***
[2026-01-09 12:36:52] total 448436
[2026-01-09 12:36:52] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 11:02 pilot3.tar.gz
[2026-01-09 12:36:52] -rwx------. 1 boincer umatlas     36322 Jan  8 11:04 runpilot2-wrapper.sh
[2026-01-09 12:36:52] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 11:04 queuedata.json
[2026-01-09 12:36:52] -rw-r--r--. 1 boincer umatlas       100 Jan  9 05:46 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 12:36:52] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 05:46 run_atlas
[2026-01-09 12:36:52] -rw-r--r--. 1 boincer umatlas       105 Jan  9 05:46 job.xml
[2026-01-09 12:36:52] -rw-r--r--. 2 boincer umatlas 226520843 Jan  9 05:46 EVNT.47898824._001141.pool.root.1
[2026-01-09 12:36:52] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 05:46 start_atlas.sh
[2026-01-09 12:36:52] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 05:46 shared
[2026-01-09 12:36:52] -rw-r--r--. 2 boincer umatlas    592397 Jan  9 05:46 input.tar.gz
[2026-01-09 12:36:52] -rw-r--r--. 1 boincer umatlas         0 Jan  9 05:46 boinc_lockfile
[2026-01-09 12:36:52] -rw-r--r--. 1 boincer umatlas      2519 Jan  9 05:46 pandaJob.out
[2026-01-09 12:36:52] -rw-------. 1 boincer umatlas        57 Jan  9 05:46 setup.sh.local
[2026-01-09 12:36:52] -rw-------. 1 boincer umatlas    989369 Jan  9 05:46 agis_schedconf.cvmfs.json
[2026-01-09 12:36:52] drwx------. 5 boincer umatlas      4096 Jan  9 05:47 pilot3
[2026-01-09 12:36:52] -rw-r--r--. 1 boincer umatlas      6842 Jan  9 12:27 init_data.xml
[2026-01-09 12:36:52] -rw-------. 1 boincer umatlas 221238962 Jan  9 12:34 HITS.47898826._029127.pool.root.1
[2026-01-09 12:36:52] -rw-r--r--. 1 boincer umatlas       531 Jan  9 12:34 boinc_task_state.xml
[2026-01-09 12:36:52] -rw-------. 1 boincer umatlas      1040 Jan  9 12:35 memory_monitor_summary.json
[2026-01-09 12:36:52] -rw-------. 1 boincer umatlas   1516240 Jan  9 12:35 agis_ddmendpoints.agis.ALL.json
[2026-01-09 12:36:52] -rw-------. 1 boincer umatlas    582995 Jan  9 12:35 log.47898826._029127.job.log.tgz.1
[2026-01-09 12:36:52] -rw-------. 1 boincer umatlas      7827 Jan  9 12:36 heartbeat.json
[2026-01-09 12:36:52] -rw-------. 1 boincer umatlas        95 Jan  9 12:36 pilot_heartbeat.json
[2026-01-09 12:36:52] -rw-r--r--. 1 boincer umatlas        28 Jan  9 12:36 wrapper_checkpoint.txt
[2026-01-09 12:36:52] -rw-r--r--. 1 boincer umatlas      8192 Jan  9 12:36 boinc_mmap_file
[2026-01-09 12:36:52] -rw-------. 1 boincer umatlas      5010 Jan  9 12:36 pilotlog.txt
[2026-01-09 12:36:52] -rw-------. 1 boincer umatlas   3179132 Jan  9 12:36 log.47898826._029127.job.log.1
[2026-01-09 12:36:52] -rw-------. 1 boincer umatlas       357 Jan  9 12:36 output.list
[2026-01-09 12:36:52] -rw-r--r--. 1 boincer umatlas       620 Jan  9 12:36 runtime_log
[2026-01-09 12:36:52] -rw-------. 1 boincer umatlas   3778560 Jan  9 12:36 result.tar.gz
[2026-01-09 12:36:52] -rw-r--r--. 1 boincer umatlas      9348 Jan  9 12:36 runtime_log.err
[2026-01-09 12:36:52] -rw-------. 1 boincer umatlas       658 Jan  9 12:36 q02KDmgf7x8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmTykKDmtnF1Vo.diag
[2026-01-09 12:36:52] -rw-r--r--. 1 boincer umatlas     21397 Jan  9 12:36 stderr.txt
[2026-01-09 12:36:52] HITS file was successfully produced:
[2026-01-09 12:36:52] -rw-------. 1 boincer umatlas 221238962 Jan  9 12:34 shared/HITS.pool.root.1
[2026-01-09 12:36:52]  *** Contents of shared directory: ***
[2026-01-09 12:36:52] total 441560
[2026-01-09 12:36:52] -rw-r--r--. 2 boincer umatlas 226520843 Jan  9 05:46 ATLAS.root_0
[2026-01-09 12:36:52] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 05:46 start_atlas.sh
[2026-01-09 12:36:52] -rw-r--r--. 2 boincer umatlas    592397 Jan  9 05:46 input.tar.gz
[2026-01-09 12:36:52] -rw-------. 1 boincer umatlas 221238962 Jan  9 12:34 HITS.pool.root.1
[2026-01-09 12:36:52] -rw-------. 1 boincer umatlas   3778560 Jan  9 12:36 result.tar.gz
12:36:53 (1194618): run_atlas exited; CPU time 56667.543233
12:36:53 (1194618): called boinc_finish(0)

</stderr_txt>
]]>

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