Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:02:27 (159720): wrapper (7.7.26015): starting
00:02:27 (159720): wrapper: running run_atlas (--nthreads 12)
[2026-01-09 00:02:27] Arguments: --nthreads 12
[2026-01-09 00:02:27] Threads: 12
[2026-01-09 00:02:27] Checking for CVMFS
[2026-01-09 00:02:28] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 00:02:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 00:02:29] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 00:02:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 00:02:30] 2.13.3.0 7038 22432 143648 154931 2 110 31650683 40960000 18162 16776704 0 36041279 99.748 26898979 46410 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-09 00:02:30] CVMFS is ok
[2026-01-09 00:02:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 00:02:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 00:02:30] Further information can be found at the LHC@home message board.
[2026-01-09 00:02:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 00:02:30] Checking for apptainer binary...
[2026-01-09 00:02:30] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 00:02:30] Running /usr/bin/apptainer --version
[2026-01-09 00:02:30] apptainer version 1.4.5-2.el9
[2026-01-09 00:02:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 00:02:30] c-212-4.aglt2.org
[2026-01-09 00:02:30] apptainer works
[2026-01-09 00:02:30] Set ATHENA_PROC_NUMBER=12
[2026-01-09 00:02:30] Set ATHENA_CORE_NUMBER=12
[2026-01-09 00:02:30] Starting ATLAS job with PandaID=6963152946
[2026-01-09 00:02:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 02:48:27]  *** The last 200 lines of the pilot log: ***
[2026-01-09 02:48:27] 2026-01-09 07:46:54,870 | INFO     | monitor loop #663: job 0:6963152946 is in state 'finished'
[2026-01-09 02:48:27] 2026-01-09 07:46:54,870 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 02:48:27] 2026-01-09 07:46:56,171 | INFO     | time since job start (9793s) is within the limit (349056.0s)
[2026-01-09 02:48:27] 2026-01-09 07:46:57,376 | INFO     | monitor loop #664: job 0:6963152946 is in state 'finished'
[2026-01-09 02:48:27] 2026-01-09 07:46:57,379 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 02:48:27] 2026-01-09 07:46:58,141 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 02:48:27] 2026-01-09 07:46:58,166 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3161.9640312499996
[2026-01-09 02:48:27] 2026-01-09 07:46:58,181 | INFO     | using path: /tmp/boinchome/slots/7/PanDA_Pilot-6963152946/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 02:48:27] 2026-01-09 07:46:58,181 | INFO     | extracted standard info from prmon json
[2026-01-09 02:48:27] 2026-01-09 07:46:58,181 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 02:48:27] 2026-01-09 07:46:58,181 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 02:48:27] 2026-01-09 07:46:58,182 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 02:48:27] 2026-01-09 07:46:58,182 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 02:48:27] 2026-01-09 07:46:58,184 | INFO     | fitting pss+swap vs Time
[2026-01-09 02:48:27] 2026-01-09 07:46:58,185 | INFO     | sum of square deviations: 1222981613.2151897
[2026-01-09 02:48:27] 2026-01-09 07:46:58,185 | INFO     | sum of deviations: 100610553084.0633
[2026-01-09 02:48:27] 2026-01-09 07:46:58,186 | INFO     | mean x: 1767939970.620253
[2026-01-09 02:48:27] 2026-01-09 07:46:58,186 | INFO     | mean y: 2507090.417721519
[2026-01-09 02:48:27] 2026-01-09 07:46:58,186 | INFO     | intersect: -145439923393.79965
[2026-01-09 02:48:27] 2026-01-09 07:46:58,186 | INFO     | chi2: 4.8291339525601895
[2026-01-09 02:48:27] 2026-01-09 07:46:58,186 | INFO     | sum of square deviations: 1110510880.6405213
[2026-01-09 02:48:27] 2026-01-09 07:46:58,187 | INFO     | sum of deviations: 107132632638.73851
[2026-01-09 02:48:27] 2026-01-09 07:46:58,187 | INFO     | mean x: 1767939818.124183
[2026-01-09 02:48:27] 2026-01-09 07:46:58,187 | INFO     | mean y: 2515559.908496732
[2026-01-09 02:48:27] 2026-01-09 07:46:58,187 | INFO     | intersect: -170553262293.6607
[2026-01-09 02:48:27] 2026-01-09 07:46:58,187 | INFO     | chi2: 4.093580540129636
[2026-01-09 02:48:27] 2026-01-09 07:46:58,188 | INFO     | current chi2=4.093580540129636 (change=15.231580230666324 %)
[2026-01-09 02:48:27] 2026-01-09 07:46:58,188 | INFO     | right removable region: 152
[2026-01-09 02:48:27] 2026-01-09 07:46:58,188 | INFO     | sum of square deviations: 1110499290.6405213
[2026-01-09 02:48:27] 2026-01-09 07:46:58,189 | INFO     | sum of deviations: 51962106535.13725
[2026-01-09 02:48:27] 2026-01-09 07:46:58,189 | INFO     | mean x: 1767940123.124183
[2026-01-09 02:48:27] 2026-01-09 07:46:58,189 | INFO     | mean y: 2572865.098039216
[2026-01-09 02:48:27] 2026-01-09 07:46:58,189 | INFO     | intersect: -82722282341.73009
[2026-01-09 02:48:27] 2026-01-09 07:46:58,189 | INFO     | chi2: 1.469961237412635
[2026-01-09 02:48:27] 2026-01-09 07:46:58,189 | INFO     | current chi2=1.469961237412635 (change=69.56056195887199 %)
[2026-01-09 02:48:27] 2026-01-09 07:46:58,189 | INFO     | sum of square deviations: 1005133380.5608102
[2026-01-09 02:48:27] 2026-01-09 07:46:58,190 | INFO     | sum of deviations: 34034253689.12838
[2026-01-09 02:48:27] 2026-01-09 07:46:58,190 | INFO     | mean x: 1767940275.6283784
[2026-01-09 02:48:27] 2026-01-09 07:46:58,190 | INFO     | mean y: 2598682.493243243
[2026-01-09 02:48:27] 2026-01-09 07:46:58,190 | INFO     | intersect: -59860628439.05741
[2026-01-09 02:48:27] 2026-01-09 07:46:58,191 | INFO     | chi2: 1.1158394975962884
[2026-01-09 02:48:27] 2026-01-09 07:46:58,191 | INFO     | current chi2=1.1158394975962884 (change=24.09054951950005 %)
[2026-01-09 02:48:27] 2026-01-09 07:46:58,191 | INFO     | left removable region: 20
[2026-01-09 02:48:27] 2026-01-09 07:46:58,191 | INFO     | sum of square deviations: 713106370.810607
[2026-01-09 02:48:27] 2026-01-09 07:46:58,192 | INFO     | sum of deviations: 23580231924.924232
[2026-01-09 02:48:27] 2026-01-09 07:46:58,192 | INFO     | mean x: 1767940397.628788
[2026-01-09 02:48:27] 2026-01-09 07:46:58,192 | INFO     | mean y: 2642122.6515151514
[2026-01-09 02:48:27] 2026-01-09 07:46:58,192 | INFO     | intersect: -58457703082.42809
[2026-01-09 02:48:27] 2026-01-09 07:46:58,192 | INFO     | chi2: 0.233949319875426
[2026-01-09 02:48:27] 2026-01-09 07:46:58,192 | INFO     | current memory leak: 33.07 B/s (using 132 data points, chi2=0.23)
[2026-01-09 02:48:27] 2026-01-09 07:46:58,192 | INFO     | could have reported an average CPU frequency of 3141 MHz (9 samples)
[2026-01-09 02:48:27] 2026-01-09 07:46:58,193 | INFO     | ..............................
[2026-01-09 02:48:27] 2026-01-09 07:46:58,193 | INFO     | . Timing measurements:
[2026-01-09 02:48:27] 2026-01-09 07:46:58,193 | INFO     | . get job = 0 s
[2026-01-09 02:48:27] 2026-01-09 07:46:58,193 | INFO     | . initial setup = 6 s
[2026-01-09 02:48:27] 2026-01-09 07:46:58,193 | INFO     | . payload setup = 40 s
[2026-01-09 02:48:27] 2026-01-09 07:46:58,193 | INFO     | . stage-in = 0 s
[2026-01-09 02:48:27] 2026-01-09 07:46:58,193 | INFO     | . payload execution = 9644 s
[2026-01-09 02:48:27] 2026-01-09 07:46:58,193 | INFO     | . stage-out = 0 s
[2026-01-09 02:48:27] 2026-01-09 07:46:58,193 | INFO     | . log creation = 0 s
[2026-01-09 02:48:27] 2026-01-09 07:46:58,193 | INFO     | ..............................
[2026-01-09 02:48:27] 2026-01-09 07:46:58,200 | INFO     | time since job start (9795s) is within the limit (349056.0s)
[2026-01-09 02:48:27] 2026-01-09 07:46:58,275 | INFO     | 
[2026-01-09 02:48:27] 2026-01-09 07:46:58,275 | INFO     | job summary report
[2026-01-09 02:48:27] 2026-01-09 07:46:58,275 | INFO     | --------------------------------------------------
[2026-01-09 02:48:27] 2026-01-09 07:46:58,275 | INFO     | PanDA job id: 6963152946
[2026-01-09 02:48:27] 2026-01-09 07:46:58,275 | INFO     | task id: 47898826
[2026-01-09 02:48:27] 2026-01-09 07:46:58,275 | INFO     | errors: (none)
[2026-01-09 02:48:27] 2026-01-09 07:46:58,275 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 02:48:27] 2026-01-09 07:46:58,275 | INFO     | pilot state: finished 
[2026-01-09 02:48:27] 2026-01-09 07:46:58,275 | INFO     | transexitcode: 0
[2026-01-09 02:48:27] 2026-01-09 07:46:58,275 | INFO     | exeerrorcode: 0
[2026-01-09 02:48:27] 2026-01-09 07:46:58,276 | INFO     | exeerrordiag: 
[2026-01-09 02:48:27] 2026-01-09 07:46:58,276 | INFO     | exitcode: 0
[2026-01-09 02:48:27] 2026-01-09 07:46:58,276 | INFO     | exitmsg: OK
[2026-01-09 02:48:27] 2026-01-09 07:46:58,276 | INFO     | cpuconsumptiontime: 45161 s
[2026-01-09 02:48:27] 2026-01-09 07:46:58,276 | INFO     | nevents: 400
[2026-01-09 02:48:27] 2026-01-09 07:46:58,276 | INFO     | neventsw: 0
[2026-01-09 02:48:27] 2026-01-09 07:46:58,276 | INFO     | pid: 204106
[2026-01-09 02:48:27] 2026-01-09 07:46:58,276 | INFO     | pgrp: 204106
[2026-01-09 02:48:27] 2026-01-09 07:46:58,276 | INFO     | corecount: 12
[2026-01-09 02:48:27] 2026-01-09 07:46:58,276 | INFO     | event service: False
[2026-01-09 02:48:27] 2026-01-09 07:46:58,276 | INFO     | sizes: {0: 2283737, 1: 2283793, 2: 2283849, 3: 2284048, 14: 2284048, 25: 2284076, 36: 2284288, 37: 2284522, 47: 2284550, 9689: 2313110, 9690: 2322108, 9691: 232244
[2026-01-09 02:48:27] 2026-01-09 07:46:58,276 | INFO     | --------------------------------------------------
[2026-01-09 02:48:27] 2026-01-09 07:46:58,276 | INFO     | 
[2026-01-09 02:48:27] 2026-01-09 07:46:58,277 | INFO     | executing command: ls -lF /tmp/boinchome/slots/7
[2026-01-09 02:48:27] 2026-01-09 07:46:58,401 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 02:48:27] 2026-01-09 07:46:58,402 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 02:48:27] 2026-01-09 07:46:58,402 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 02:48:27] 2026-01-09 07:46:58,402 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 02:48:27] 2026-01-09 07:46:58,402 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 02:48:27] 2026-01-09 07:46:58,402 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 02:48:27] 2026-01-09 07:46:58,402 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 02:48:27] 2026-01-09 07:46:58,402 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 02:48:27] 2026-01-09 07:46:58,402 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 02:48:27] 2026-01-09 07:46:58,402 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 02:48:27] 2026-01-09 07:46:58,402 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 02:48:27] 2026-01-09 07:46:58,402 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 02:48:27] 2026-01-09 07:46:58,402 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 02:48:27] 2026-01-09 07:46:58,403 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 02:48:27] 2026-01-09 07:46:58,403 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 02:48:27] 2026-01-09 07:46:58,403 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 02:48:27] 2026-01-09 07:46:58,403 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 02:48:27] 2026-01-09 07:46:58,403 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 02:48:27] 2026-01-09 07:46:58,403 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 02:48:27] 2026-01-09 07:46:58,403 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 02:48:27] 2026-01-09 07:46:58,403 | INFO     | job 6963152946 has completed (purged errors)
[2026-01-09 02:48:27] 2026-01-09 07:46:58,403 | INFO     | overall cleanup function is called
[2026-01-09 02:48:27] 2026-01-09 07:46:59,416 | INFO     | --- collectZombieJob: --- 10, [204106]
[2026-01-09 02:48:27] 2026-01-09 07:46:59,416 | INFO     | zombie collector waiting for pid 204106
[2026-01-09 02:48:27] 2026-01-09 07:46:59,416 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 02:48:27] 2026-01-09 07:46:59,416 | INFO     | collected zombie processes
[2026-01-09 02:48:27] 2026-01-09 07:46:59,416 | INFO     | will attempt to kill all subprocesses of pid=204106
[2026-01-09 02:48:27] 2026-01-09 07:47:00,178 | INFO     | PID=172774 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-09 02:48:27] 2026-01-09 07:47:00,178 | INFO     | .. there are 17 such processes running
[2026-01-09 02:48:27] 2026-01-09 07:47:00,211 | INFO     | process IDs to be killed: [204106] (in reverse order)
[2026-01-09 02:48:27] 2026-01-09 07:47:00,558 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 02:48:27] 2026-01-09 07:47:00,558 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 02:48:27] 2026-01-09 07:47:00,582 | INFO     | did not find any defunct processes belonging to 204106
[2026-01-09 02:48:27] 2026-01-09 07:47:00,601 | INFO     | did not find any defunct processes belonging to 204106
[2026-01-09 02:48:27] 2026-01-09 07:47:00,601 | INFO     | ready for new job
[2026-01-09 02:48:27] 2026-01-09 07:47:00,601 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 02:48:27] 2026-01-09 07:47:00,606 | INFO     | ***************************************
[2026-01-09 02:48:27] 2026-01-09 07:47:00,607 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 02:48:27] 2026-01-09 07:47:00,607 | INFO     | ***************************************
[2026-01-09 02:48:27] 2026-01-09 07:47:00,607 | INFO     | 
[2026-01-09 02:48:27] 2026-01-09 07:47:00,616 | INFO     | architecture information:
[2026-01-09 02:48:27] 2026-01-09 07:47:00,616 | INFO     | executing command: cat /etc/os-release
[2026-01-09 02:48:27] 2026-01-09 07:47:00,653 | INFO     | cat /etc/os-release:
[2026-01-09 02:48:27] NAME="CentOS Linux"
[2026-01-09 02:48:27] VERSION="7 (Core)"
[2026-01-09 02:48:27] ID="centos"
[2026-01-09 02:48:27] ID_LIKE="rhel fedora"
[2026-01-09 02:48:27] VERSION_ID="7"
[2026-01-09 02:48:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 02:48:27] ANSI_COLOR="0;31"
[2026-01-09 02:48:27] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 02:48:27] HOME_URL="https://www.centos.org/"
[2026-01-09 02:48:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 02:48:27] 
[2026-01-09 02:48:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 02:48:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 02:48:27] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 02:48:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 02:48:27] 
[2026-01-09 02:48:27] 2026-01-09 07:47:00,653 | INFO     | ***************************************
[2026-01-09 02:48:27] 2026-01-09 07:47:01,157 | INFO     | executing command: df -mP /tmp/boinchome/slots/7
[2026-01-09 02:48:27] 2026-01-09 07:47:01,208 | INFO     | sufficient remaining disk space (126935367680 B)
[2026-01-09 02:48:27] 2026-01-09 07:47:01,209 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 02:48:27] 2026-01-09 07:47:01,209 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 02:48:27] 2026-01-09 07:47:01,209 | INFO     | update_server=False
[2026-01-09 02:48:27] 2026-01-09 07:47:01,209 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 02:48:27] 2026-01-09 07:47:01,209 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 02:48:27] 2026-01-09 07:47:01,209 | INFO     | aborting loop
[2026-01-09 02:48:27] 2026-01-09 07:47:01,477 | INFO     | all payload control threads have been joined
[2026-01-09 02:48:27] 2026-01-09 07:47:01,549 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 02:48:27] 2026-01-09 07:47:01,669 | INFO     | all data control threads have been joined
[2026-01-09 02:48:27] 2026-01-09 07:47:02,004 | INFO     | all job control threads have been joined
[2026-01-09 02:48:27] 2026-01-09 07:47:02,215 | INFO     | [job] retrieve thread has finished
[2026-01-09 02:48:27] 2026-01-09 07:47:02,216 | INFO     | [job] job monitor thread has finished
[2026-01-09 02:48:27] 2026-01-09 07:47:02,337 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 02:48:27] 2026-01-09 07:47:02,483 | INFO     | [payload] control thread has finished
[2026-01-09 02:48:27] 2026-01-09 07:47:02,595 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 02:48:27] 2026-01-09 07:47:02,677 | INFO     | [data] control thread has finished
[2026-01-09 02:48:27] 2026-01-09 07:47:02,842 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 02:48:27] 2026-01-09 07:47:02,950 | INFO     | [data] copytool_in thread has finished
[2026-01-09 02:48:27] 2026-01-09 07:47:03,010 | INFO     | [job] control thread has finished
[2026-01-09 02:48:27] 2026-01-09 07:47:03,152 | INFO     | [payload] validate_post thread has finished
[2026-01-09 02:48:27] 2026-01-09 07:47:03,290 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 02:48:27] 2026-01-09 07:47:03,556 | INFO     | [data] copytool_out thread has finished
[2026-01-09 02:48:27] 2026-01-09 07:47:03,652 | INFO     | [payload] failed_post thread has finished
[2026-01-09 02:48:27] 2026-01-09 07:47:03,688 | INFO     | [job] validate thread has finished
[2026-01-09 02:48:27] 2026-01-09 07:47:04,296 | INFO     | [job] queue monitor thread has finished
[2026-01-09 02:48:27] 2026-01-09 07:47:04,610 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 02:48:27] 2026-01-09 07:47:08,622 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 02:48:27] 2026-01-09 07:47:11,414 | INFO     | job.realtimelogging is not enabled
[2026-01-09 02:48:27] 2026-01-09 07:47:12,424 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 02:48:27] 2026-01-09 07:47:33,961 | INFO     | PID=172774 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-09 02:48:27] 2026-01-09 07:47:33,961 | INFO     | .. there are 17 such processes running
[2026-01-09 02:48:27] 2026-01-09 07:47:33,962 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 02:48:27] 2026-01-09 07:47:33,962 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 02:48:27] 2026-01-09 07:47:33,962 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 02:48:27] 2026-01-09 07:47:59,758 | INFO     | [monitor] cgroup control has ended
[2026-01-09 02:48:27] 2026-01-09 07:48:00,590 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140470733141824)>', '<ExcThread(monitor, started 140470193747712)>']
[2026-01-09 02:48:27] 2026-01-09 07:48:01,126 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 02:48:27] 2026-01-09 07:48:01,126 | INFO     | [monitor] control thread has ended
[2026-01-09 02:48:27] 2026-01-09 07:48:05,616 | INFO     | all workflow threads have been joined
[2026-01-09 02:48:27] 2026-01-09 07:48:05,616 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 02:48:27] 2026-01-09 07:48:05,617 | INFO     | traces error code: 0
[2026-01-09 02:48:27] 2026-01-09 07:48:05,617 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 02:48:27] 2026-01-09 07:48:06,171 [wrapper] ==== pilot stdout END ====
[2026-01-09 02:48:27] 2026-01-09 07:48:06,205 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 02:48:27] 2026-01-09 07:48:06,225 [wrapper] pilotpid: 172774
[2026-01-09 02:48:27] 2026-01-09 07:48:06,246 [wrapper] Pilot exit status: 0
[2026-01-09 02:48:27] 2026-01-09 07:48:06,406 [wrapper] pandaids: 6963152946
[2026-01-09 02:48:27] 2026-01-09 07:48:07,129 [wrapper] cleanup supervisor_pilot  601819 172775
[2026-01-09 02:48:27] 2026-01-09 07:48:07,181 [wrapper] Test setup, not cleaning
[2026-01-09 02:48:27] 2026-01-09 07:48:07,225 [wrapper] apfmon messages muted
[2026-01-09 02:48:27] 2026-01-09 07:48:07,260 [wrapper] ==== wrapper stdout END ====
[2026-01-09 02:48:27] 2026-01-09 07:48:07,297 [wrapper] ==== wrapper stderr END ====
[2026-01-09 02:48:27]  *** Error codes and diagnostics ***
[2026-01-09 02:48:27]     "exeErrorCode": 0,
[2026-01-09 02:48:27]     "exeErrorDiag": "",
[2026-01-09 02:48:27]     "pilotErrorCode": 0,
[2026-01-09 02:48:27]     "pilotErrorDiag": "",
[2026-01-09 02:48:27]  *** Listing of results directory ***
[2026-01-09 02:48:27] total 445988
[2026-01-09 02:48:27] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 11:02 pilot3.tar.gz
[2026-01-09 02:48:27] -rwx------. 1 boincer umatlas     36322 Jan  8 11:04 runpilot2-wrapper.sh
[2026-01-09 02:48:27] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 11:04 queuedata.json
[2026-01-09 02:48:27] -rw-r--r--. 1 boincer umatlas       100 Jan  9 00:02 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 02:48:27] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 00:02 run_atlas
[2026-01-09 02:48:27] -rw-r--r--. 1 boincer umatlas       105 Jan  9 00:02 job.xml
[2026-01-09 02:48:27] -rw-r--r--. 2 boincer umatlas 224962266 Jan  9 00:02 EVNT.47898824._001147.pool.root.1
[2026-01-09 02:48:27] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 00:02 start_atlas.sh
[2026-01-09 02:48:27] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 00:02 shared
[2026-01-09 02:48:27] -rw-r--r--. 2 boincer umatlas    592396 Jan  9 00:02 input.tar.gz
[2026-01-09 02:48:27] -rw-r--r--. 1 boincer umatlas         0 Jan  9 00:02 boinc_lockfile
[2026-01-09 02:48:27] -rw-r--r--. 1 boincer umatlas      2516 Jan  9 00:02 pandaJob.out
[2026-01-09 02:48:27] -rw-------. 1 boincer umatlas        57 Jan  9 00:02 setup.sh.local
[2026-01-09 02:48:27] -rw-------. 1 boincer umatlas    989771 Jan  9 00:03 agis_schedconf.cvmfs.json
[2026-01-09 02:48:27] -rw-------. 1 boincer umatlas   1516240 Jan  9 00:03 agis_ddmendpoints.agis.ALL.json
[2026-01-09 02:48:27] drwx------. 5 boincer umatlas      4096 Jan  9 00:03 pilot3
[2026-01-09 02:48:27] -rw-------. 1 boincer umatlas 224292064 Jan  9 02:45 HITS.47898826._029648.pool.root.1
[2026-01-09 02:48:27] -rw-r--r--. 1 boincer umatlas       529 Jan  9 02:45 boinc_task_state.xml
[2026-01-09 02:48:27] -rw-r--r--. 1 boincer umatlas      6955 Jan  9 02:45 init_data.xml
[2026-01-09 02:48:27] -rw-------. 1 boincer umatlas      1031 Jan  9 02:46 memory_monitor_summary.json
[2026-01-09 02:48:27] -rw-------. 1 boincer umatlas    443914 Jan  9 02:46 log.47898826._029648.job.log.tgz.1
[2026-01-09 02:48:27] -rw-------. 1 boincer umatlas      7772 Jan  9 02:46 heartbeat.json
[2026-01-09 02:48:27] -rw-------. 1 boincer umatlas        95 Jan  9 02:47 pilot_heartbeat.json
[2026-01-09 02:48:27] -rw-------. 1 boincer umatlas      4896 Jan  9 02:48 pilotlog.txt
[2026-01-09 02:48:27] -rw-------. 1 boincer umatlas   1317462 Jan  9 02:48 log.47898826._029648.job.log.1
[2026-01-09 02:48:27] -rw-------. 1 boincer umatlas       357 Jan  9 02:48 output.list
[2026-01-09 02:48:27] -rw-r--r--. 1 boincer umatlas       620 Jan  9 02:48 runtime_log
[2026-01-09 02:48:27] -rw-------. 1 boincer umatlas   1781760 Jan  9 02:48 result.tar.gz
[2026-01-09 02:48:27] -rw-r--r--. 1 boincer umatlas      9339 Jan  9 02:48 runtime_log.err
[2026-01-09 02:48:27] -rw-------. 1 boincer umatlas       652 Jan  9 02:48 EZSMDmsf7x8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmglfKDmPnCAXn.diag
[2026-01-09 02:48:27] -rw-r--r--. 1 boincer umatlas        27 Jan  9 02:48 wrapper_checkpoint.txt
[2026-01-09 02:48:27] -rw-r--r--. 1 boincer umatlas      8192 Jan  9 02:48 boinc_mmap_file
[2026-01-09 02:48:27] -rw-r--r--. 1 boincer umatlas     21474 Jan  9 02:48 stderr.txt
[2026-01-09 02:48:27] HITS file was successfully produced:
[2026-01-09 02:48:27] -rw-------. 1 boincer umatlas 224292064 Jan  9 02:45 shared/HITS.pool.root.1
[2026-01-09 02:48:27]  *** Contents of shared directory: ***
[2026-01-09 02:48:27] total 441068
[2026-01-09 02:48:27] -rw-r--r--. 2 boincer umatlas 224962266 Jan  9 00:02 ATLAS.root_0
[2026-01-09 02:48:27] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 00:02 start_atlas.sh
[2026-01-09 02:48:27] -rw-r--r--. 2 boincer umatlas    592396 Jan  9 00:02 input.tar.gz
[2026-01-09 02:48:27] -rw-------. 1 boincer umatlas 224292064 Jan  9 02:45 HITS.pool.root.1
[2026-01-09 02:48:27] -rw-------. 1 boincer umatlas   1781760 Jan  9 02:48 result.tar.gz
02:48:29 (159720): run_atlas exited; CPU time 45469.343266
02:48:29 (159720): called boinc_finish(0)

</stderr_txt>
]]>

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