Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
00:01:13 (8297): wrapper (7.7.26015): starting
00:01:13 (8297): wrapper: running run_atlas (--nthreads 12)
[2026-01-09 00:01:13] Arguments: --nthreads 12
[2026-01-09 00:01:13] Threads: 12
[2026-01-09 00:01:13] Checking for CVMFS
[2026-01-09 00:01:13] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 00:01:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 00:01:13] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 00:01:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 00:01:14] 2.11.2.0 3035 350549 94408 154931 3 57 16980600 20275201 1 130560 3 148190377 99.955 20931367 16277 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-09 00:01:14] CVMFS is ok
[2026-01-09 00:01:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 00:01:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 00:01:14] Further information can be found at the LHC@home message board.
[2026-01-09 00:01:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 00:01:14] Checking for apptainer binary...
[2026-01-09 00:01:14] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 00:01:14] Running /usr/bin/apptainer --version
[2026-01-09 00:01:14] apptainer version 1.3.2-1.el7
[2026-01-09 00:01:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 00:01:15] c-205-31.aglt2.org
[2026-01-09 00:01:15] apptainer works
[2026-01-09 00:01:15] Set ATHENA_PROC_NUMBER=12
[2026-01-09 00:01:15] Set ATHENA_CORE_NUMBER=12
[2026-01-09 00:01:15] Starting ATLAS job with PandaID=6963152265
[2026-01-09 00:01:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 01:43:45]  *** The last 200 lines of the pilot log: ***
[2026-01-09 01:43:45] 2026-01-09 06:42:58,752 | INFO     | time since job start (6088s) is within the limit (349056.0s)
[2026-01-09 01:43:45] 2026-01-09 06:42:59,683 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-09 01:43:45] 2026-01-09 06:42:59,686 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1673.5833333333333
[2026-01-09 01:43:45] 2026-01-09 06:42:59,688 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6963152265/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 01:43:45] 2026-01-09 06:42:59,689 | INFO     | extracted standard info from prmon json
[2026-01-09 01:43:45] 2026-01-09 06:42:59,689 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 01:43:45] 2026-01-09 06:42:59,689 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 01:43:45] 2026-01-09 06:42:59,689 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 01:43:45] 2026-01-09 06:42:59,689 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 01:43:45] 2026-01-09 06:42:59,691 | INFO     | fitting pss+swap vs Time
[2026-01-09 01:43:45] 2026-01-09 06:42:59,691 | INFO     | sum of square deviations: 310052325.0
[2026-01-09 01:43:45] 2026-01-09 06:42:59,692 | INFO     | sum of deviations: 9833909186.0
[2026-01-09 01:43:45] 2026-01-09 06:42:59,692 | INFO     | mean x: 1767937938.5
[2026-01-09 01:43:45] 2026-01-09 06:42:59,692 | INFO     | mean y: 2602250.2
[2026-01-09 01:43:45] 2026-01-09 06:42:59,692 | INFO     | intersect: -56070968988.761215
[2026-01-09 01:43:45] 2026-01-09 06:42:59,692 | INFO     | chi2: 2.092970115455262
[2026-01-09 01:43:45] 2026-01-09 06:42:59,693 | INFO     | sum of square deviations: 265828240.0
[2026-01-09 01:43:45] 2026-01-09 06:42:59,694 | INFO     | sum of deviations: 16106574810.000002
[2026-01-09 01:43:45] 2026-01-09 06:42:59,694 | INFO     | mean x: 1767937786.0
[2026-01-09 01:43:45] 2026-01-09 06:42:59,694 | INFO     | mean y: 2622891.505263158
[2026-01-09 01:43:45] 2026-01-09 06:42:59,694 | INFO     | intersect: -107117005217.36223
[2026-01-09 01:43:45] 2026-01-09 06:42:59,695 | INFO     | chi2: 1.3079713389771674
[2026-01-09 01:43:45] 2026-01-09 06:42:59,695 | INFO     | current chi2=1.3079713389771674 (change=37.506449360235706 %)
[2026-01-09 01:43:45] 2026-01-09 06:42:59,695 | INFO     | sum of square deviations: 226022842.5
[2026-01-09 01:43:45] 2026-01-09 06:42:59,696 | INFO     | sum of deviations: 15158236266.5
[2026-01-09 01:43:45] 2026-01-09 06:42:59,696 | INFO     | mean x: 1767937633.5
[2026-01-09 01:43:45] 2026-01-09 06:42:59,696 | INFO     | mean y: 2619254.988888889
[2026-01-09 01:43:45] 2026-01-09 06:42:59,696 | INFO     | intersect: -118564230257.26732
[2026-01-09 01:43:45] 2026-01-09 06:42:59,696 | INFO     | chi2: 1.3091227328931365
[2026-01-09 01:43:45] 2026-01-09 06:42:59,696 | INFO     | current chi2=1.3091227328931365 (change=-0.0880289866954935 %)
[2026-01-09 01:43:45] 2026-01-09 06:42:59,697 | INFO     | right removable region: 89
[2026-01-09 01:43:45] 2026-01-09 06:42:59,697 | INFO     | sum of square deviations: 265828240.0
[2026-01-09 01:43:45] 2026-01-09 06:42:59,697 | INFO     | sum of deviations: -4574319362.0
[2026-01-09 01:43:45] 2026-01-09 06:42:59,697 | INFO     | mean x: 1767938091.0
[2026-01-09 01:43:45] 2026-01-09 06:42:59,697 | INFO     | mean y: 2650772.263157895
[2026-01-09 01:43:45] 2026-01-09 06:42:59,697 | INFO     | intersect: 30424977009.981987
[2026-01-09 01:43:45] 2026-01-09 06:42:59,698 | INFO     | chi2: 0.8331446526217586
[2026-01-09 01:43:45] 2026-01-09 06:42:59,698 | INFO     | current chi2=0.8331446526217586 (change=60.1931892639311 %)
[2026-01-09 01:43:45] 2026-01-09 06:42:59,698 | INFO     | sum of square deviations: 226022842.5
[2026-01-09 01:43:45] 2026-01-09 06:42:59,698 | INFO     | sum of deviations: -5162760498.0
[2026-01-09 01:43:45] 2026-01-09 06:42:59,699 | INFO     | mean x: 1767938243.5
[2026-01-09 01:43:45] 2026-01-09 06:42:59,699 | INFO     | mean y: 2652993.222222222
[2026-01-09 01:43:45] 2026-01-09 06:42:59,699 | INFO     | intersect: 40385481673.227455
[2026-01-09 01:43:45] 2026-01-09 06:42:59,699 | INFO     | chi2: 0.8200076022327768
[2026-01-09 01:43:45] 2026-01-09 06:42:59,699 | INFO     | current chi2=0.8200076022327768 (change=1.5768030614662005 %)
[2026-01-09 01:43:45] 2026-01-09 06:42:59,699 | INFO     | left removable region: 20
[2026-01-09 01:43:45] 2026-01-09 06:42:59,699 | INFO     | sum of square deviations: 101843770.0
[2026-01-09 01:43:45] 2026-01-09 06:42:59,700 | INFO     | sum of deviations: 379563106.00000006
[2026-01-09 01:43:45] 2026-01-09 06:42:59,700 | INFO     | mean x: 1767938213.0
[2026-01-09 01:43:45] 2026-01-09 06:42:59,700 | INFO     | mean y: 2682286.231884058
[2026-01-09 01:43:45] 2026-01-09 06:42:59,700 | INFO     | intersect: -6586273713.161792
[2026-01-09 01:43:45] 2026-01-09 06:42:59,700 | INFO     | chi2: 1.75864688619201e-05
[2026-01-09 01:43:45] 2026-01-09 06:42:59,700 | INFO     | current memory leak: 3.73 B/s (using 69 data points, chi2=0.00)
[2026-01-09 01:43:45] 2026-01-09 06:42:59,701 | INFO     | could have reported an average CPU frequency of 2120 MHz (7 samples)
[2026-01-09 01:43:45] 2026-01-09 06:42:59,701 | INFO     | ..............................
[2026-01-09 01:43:45] 2026-01-09 06:42:59,701 | INFO     | . Timing measurements:
[2026-01-09 01:43:45] 2026-01-09 06:42:59,701 | INFO     | . get job = 0 s
[2026-01-09 01:43:45] 2026-01-09 06:42:59,701 | INFO     | . initial setup = 2 s
[2026-01-09 01:43:45] 2026-01-09 06:42:59,701 | INFO     | . payload setup = 7 s
[2026-01-09 01:43:45] 2026-01-09 06:42:59,701 | INFO     | . stage-in = 0 s
[2026-01-09 01:43:45] 2026-01-09 06:42:59,702 | INFO     | . payload execution = 6050 s
[2026-01-09 01:43:45] 2026-01-09 06:42:59,702 | INFO     | . stage-out = 0 s
[2026-01-09 01:43:45] 2026-01-09 06:42:59,702 | INFO     | . log creation = 0 s
[2026-01-09 01:43:45] 2026-01-09 06:42:59,702 | INFO     | ..............................
[2026-01-09 01:43:45] 2026-01-09 06:42:59,781 | INFO     | 
[2026-01-09 01:43:45] 2026-01-09 06:42:59,781 | INFO     | job summary report
[2026-01-09 01:43:45] 2026-01-09 06:42:59,782 | INFO     | --------------------------------------------------
[2026-01-09 01:43:45] 2026-01-09 06:42:59,782 | INFO     | PanDA job id: 6963152265
[2026-01-09 01:43:45] 2026-01-09 06:42:59,782 | INFO     | task id: 47898826
[2026-01-09 01:43:45] 2026-01-09 06:42:59,782 | INFO     | errors: (none)
[2026-01-09 01:43:45] 2026-01-09 06:42:59,782 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 01:43:45] 2026-01-09 06:42:59,782 | INFO     | pilot state: finished 
[2026-01-09 01:43:45] 2026-01-09 06:42:59,782 | INFO     | transexitcode: 0
[2026-01-09 01:43:45] 2026-01-09 06:42:59,782 | INFO     | exeerrorcode: 0
[2026-01-09 01:43:45] 2026-01-09 06:42:59,782 | INFO     | exeerrordiag: 
[2026-01-09 01:43:45] 2026-01-09 06:42:59,783 | INFO     | exitcode: 0
[2026-01-09 01:43:45] 2026-01-09 06:42:59,783 | INFO     | exitmsg: OK
[2026-01-09 01:43:45] 2026-01-09 06:42:59,783 | INFO     | cpuconsumptiontime: 65971 s
[2026-01-09 01:43:45] 2026-01-09 06:42:59,783 | INFO     | nevents: 400
[2026-01-09 01:43:45] 2026-01-09 06:42:59,783 | INFO     | neventsw: 0
[2026-01-09 01:43:45] 2026-01-09 06:42:59,783 | INFO     | pid: 18365
[2026-01-09 01:43:45] 2026-01-09 06:42:59,783 | INFO     | pgrp: 18365
[2026-01-09 01:43:45] 2026-01-09 06:42:59,783 | INFO     | corecount: 12
[2026-01-09 01:43:45] 2026-01-09 06:42:59,784 | INFO     | event service: False
[2026-01-09 01:43:45] 2026-01-09 06:42:59,784 | INFO     | sizes: {0: 2283970, 5: 2284232, 11: 2284288, 6061: 2311040, 6062: 2320038, 6065: 2320094, 6073: 2320416}
[2026-01-09 01:43:45] 2026-01-09 06:42:59,784 | INFO     | --------------------------------------------------
[2026-01-09 01:43:45] 2026-01-09 06:42:59,784 | INFO     | 
[2026-01-09 01:43:45] 2026-01-09 06:42:59,784 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-09 01:43:45] 2026-01-09 06:42:59,806 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 01:43:45] 2026-01-09 06:42:59,806 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 01:43:45] 2026-01-09 06:42:59,807 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 01:43:45] 2026-01-09 06:42:59,807 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 01:43:45] 2026-01-09 06:42:59,807 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 01:43:45] 2026-01-09 06:42:59,807 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 01:43:45] 2026-01-09 06:42:59,807 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 01:43:45] 2026-01-09 06:42:59,808 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 01:43:45] 2026-01-09 06:42:59,808 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 01:43:45] 2026-01-09 06:42:59,808 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 01:43:45] 2026-01-09 06:42:59,808 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 01:43:45] 2026-01-09 06:42:59,808 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 01:43:45] 2026-01-09 06:42:59,808 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 01:43:45] 2026-01-09 06:42:59,809 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 01:43:45] 2026-01-09 06:42:59,809 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 01:43:45] 2026-01-09 06:42:59,809 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 01:43:45] 2026-01-09 06:42:59,809 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 01:43:45] 2026-01-09 06:42:59,809 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 01:43:45] 2026-01-09 06:42:59,810 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 01:43:45] 2026-01-09 06:42:59,810 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 01:43:45] 2026-01-09 06:42:59,810 | INFO     | job 6963152265 has completed (purged errors)
[2026-01-09 01:43:45] 2026-01-09 06:42:59,810 | INFO     | overall cleanup function is called
[2026-01-09 01:43:45] 2026-01-09 06:42:59,903 | INFO     | PID=11994 has CPU usage=6.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-09 01:43:45] 2026-01-09 06:43:00,818 | INFO     | --- collectZombieJob: --- 10, [18365]
[2026-01-09 01:43:45] 2026-01-09 06:43:00,819 | INFO     | zombie collector waiting for pid 18365
[2026-01-09 01:43:45] 2026-01-09 06:43:00,819 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 01:43:45] 2026-01-09 06:43:00,819 | INFO     | collected zombie processes
[2026-01-09 01:43:45] 2026-01-09 06:43:00,819 | INFO     | will attempt to kill all subprocesses of pid=18365
[2026-01-09 01:43:45] 2026-01-09 06:43:00,907 | INFO     | process IDs to be killed: [18365] (in reverse order)
[2026-01-09 01:43:45] 2026-01-09 06:43:00,957 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 01:43:45] 2026-01-09 06:43:00,957 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 01:43:45] 2026-01-09 06:43:00,961 | INFO     | did not find any defunct processes belonging to 18365
[2026-01-09 01:43:45] 2026-01-09 06:43:00,965 | INFO     | did not find any defunct processes belonging to 18365
[2026-01-09 01:43:45] 2026-01-09 06:43:00,965 | INFO     | ready for new job
[2026-01-09 01:43:45] 2026-01-09 06:43:00,965 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 01:43:45] 2026-01-09 06:43:00,966 | INFO     | ***************************************
[2026-01-09 01:43:45] 2026-01-09 06:43:00,966 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 01:43:45] 2026-01-09 06:43:00,966 | INFO     | ***************************************
[2026-01-09 01:43:45] 2026-01-09 06:43:00,966 | INFO     | 
[2026-01-09 01:43:45] 2026-01-09 06:43:00,967 | INFO     | architecture information:
[2026-01-09 01:43:45] 2026-01-09 06:43:00,967 | INFO     | executing command: cat /etc/os-release
[2026-01-09 01:43:45] 2026-01-09 06:43:00,982 | INFO     | cat /etc/os-release:
[2026-01-09 01:43:45] NAME="CentOS Linux"
[2026-01-09 01:43:45] VERSION="7 (Core)"
[2026-01-09 01:43:45] ID="centos"
[2026-01-09 01:43:45] ID_LIKE="rhel fedora"
[2026-01-09 01:43:45] VERSION_ID="7"
[2026-01-09 01:43:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 01:43:45] ANSI_COLOR="0;31"
[2026-01-09 01:43:45] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 01:43:45] HOME_URL="https://www.centos.org/"
[2026-01-09 01:43:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 01:43:45] 
[2026-01-09 01:43:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 01:43:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 01:43:45] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 01:43:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 01:43:45] 
[2026-01-09 01:43:45] 2026-01-09 06:43:00,982 | INFO     | ***************************************
[2026-01-09 01:43:45] 2026-01-09 06:43:01,485 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-09 01:43:45] 2026-01-09 06:43:01,501 | INFO     | sufficient remaining disk space (29300359168 B)
[2026-01-09 01:43:45] 2026-01-09 06:43:01,502 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 01:43:45] 2026-01-09 06:43:01,502 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 01:43:45] 2026-01-09 06:43:01,502 | INFO     | update_server=False
[2026-01-09 01:43:45] 2026-01-09 06:43:01,502 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 01:43:45] 2026-01-09 06:43:01,503 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 01:43:45] 2026-01-09 06:43:01,503 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 01:43:45] 2026-01-09 06:43:01,503 | INFO     | aborting loop
[2026-01-09 01:43:45] 2026-01-09 06:43:01,911 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 01:43:45] 2026-01-09 06:43:01,950 | INFO     | all data control threads have been joined
[2026-01-09 01:43:45] 2026-01-09 06:43:02,107 | INFO     | all job control threads have been joined
[2026-01-09 01:43:45] 2026-01-09 06:43:02,291 | INFO     | all payload control threads have been joined
[2026-01-09 01:43:45] 2026-01-09 06:43:02,508 | INFO     | [job] retrieve thread has finished
[2026-01-09 01:43:45] 2026-01-09 06:43:02,508 | INFO     | [job] queue monitor thread has finished
[2026-01-09 01:43:45] 2026-01-09 06:43:02,509 | INFO     | [payload] failed_post thread has finished
[2026-01-09 01:43:45] 2026-01-09 06:43:02,509 | INFO     | [job] job monitor thread has finished
[2026-01-09 01:43:45] 2026-01-09 06:43:02,812 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 01:43:45] 2026-01-09 06:43:02,955 | INFO     | [data] control thread has finished
[2026-01-09 01:43:45] 2026-01-09 06:43:03,112 | INFO     | [job] control thread has finished
[2026-01-09 01:43:45] 2026-01-09 06:43:03,238 | INFO     | [payload] validate_post thread has finished
[2026-01-09 01:43:45] 2026-01-09 06:43:03,297 | INFO     | [payload] control thread has finished
[2026-01-09 01:43:45] 2026-01-09 06:43:03,324 | INFO     | [job] validate thread has finished
[2026-01-09 01:43:45] 2026-01-09 06:43:03,430 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 01:43:45] 2026-01-09 06:43:03,431 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 01:43:45] 2026-01-09 06:43:03,541 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 01:43:45] 2026-01-09 06:43:03,916 | INFO     | [data] copytool_out thread has finished
[2026-01-09 01:43:45] 2026-01-09 06:43:03,950 | INFO     | [data] copytool_in thread has finished
[2026-01-09 01:43:45] 2026-01-09 06:43:06,818 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 01:43:45] 2026-01-09 06:43:12,309 | INFO     | job.realtimelogging is not enabled
[2026-01-09 01:43:45] 2026-01-09 06:43:13,314 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 01:43:45] 2026-01-09 06:43:32,097 | INFO     | PID=11994 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-09 01:43:45] 2026-01-09 06:43:32,097 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 01:43:45] 2026-01-09 06:43:32,097 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 01:43:45] 2026-01-09 06:43:32,097 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 01:43:45] 2026-01-09 06:43:39,654 | INFO     | [monitor] cgroup control has ended
[2026-01-09 01:43:45] 2026-01-09 06:43:40,318 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140412478637888)>', '<ExcThread(monitor, started 140411649640192)>']
[2026-01-09 01:43:45] 2026-01-09 06:43:41,141 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 01:43:45] 2026-01-09 06:43:41,141 | INFO     | [monitor] control thread has ended
[2026-01-09 01:43:45] 2026-01-09 06:43:45,343 | INFO     | all workflow threads have been joined
[2026-01-09 01:43:45] 2026-01-09 06:43:45,352 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 01:43:45] 2026-01-09 06:43:45,352 | INFO     | traces error code: 0
[2026-01-09 01:43:45] 2026-01-09 06:43:45,352 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 01:43:45] 2026-01-09 06:43:45,455 [wrapper] ==== pilot stdout END ====
[2026-01-09 01:43:45] 2026-01-09 06:43:45,460 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 01:43:45] 2026-01-09 06:43:45,463 [wrapper] pilotpid: 11994
[2026-01-09 01:43:45] 2026-01-09 06:43:45,467 [wrapper] Pilot exit status: 0
[2026-01-09 01:43:45] 2026-01-09 06:43:45,481 [wrapper] pandaids: 6963152265
[2026-01-09 01:43:45] 2026-01-09 06:43:45,526 [wrapper] cleanup supervisor_pilot 17619 11995
[2026-01-09 01:43:45] 2026-01-09 06:43:45,530 [wrapper] Test setup, not cleaning
[2026-01-09 01:43:45] 2026-01-09 06:43:45,534 [wrapper] apfmon messages muted
[2026-01-09 01:43:45] 2026-01-09 06:43:45,538 [wrapper] ==== wrapper stdout END ====
[2026-01-09 01:43:45] 2026-01-09 06:43:45,542 [wrapper] ==== wrapper stderr END ====
[2026-01-09 01:43:45]  *** Error codes and diagnostics ***
[2026-01-09 01:43:45]     "exeErrorCode": 0,
[2026-01-09 01:43:45]     "exeErrorDiag": "",
[2026-01-09 01:43:45]     "pilotErrorCode": 0,
[2026-01-09 01:43:45]     "pilotErrorDiag": "",
[2026-01-09 01:43:45]  *** Listing of results directory ***
[2026-01-09 01:43:45] total 445892
[2026-01-09 01:43:45] -rw-r--r-- 1 boincer umatlas    579449 Jan  8 11:02 pilot3.tar.gz
[2026-01-09 01:43:45] -rwx------ 1 boincer umatlas     36322 Jan  8 11:04 runpilot2-wrapper.sh
[2026-01-09 01:43:45] -rw-r--r-- 1 boincer umatlas      5112 Jan  8 11:04 queuedata.json
[2026-01-09 01:43:45] -rw-r--r-- 1 boincer umatlas       100 Jan  9 00:01 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 01:43:45] -rwxr-xr-x 1 boincer umatlas      7986 Jan  9 00:01 run_atlas
[2026-01-09 01:43:45] -rw-r--r-- 1 boincer umatlas       105 Jan  9 00:01 job.xml
[2026-01-09 01:43:45] -rw-r--r-- 2 boincer umatlas 227018089 Jan  9 00:01 EVNT.47898824._001138.pool.root.1
[2026-01-09 01:43:45] drwxrwx--x 2 boincer umatlas      4096 Jan  9 00:01 shared
[2026-01-09 01:43:45] -rw-r--r-- 2 boincer umatlas    592400 Jan  9 00:01 input.tar.gz
[2026-01-09 01:43:45] -rw-r--r-- 2 boincer umatlas     15847 Jan  9 00:01 start_atlas.sh
[2026-01-09 01:43:45] -rw-r--r-- 1 boincer umatlas         0 Jan  9 00:01 boinc_lockfile
[2026-01-09 01:43:45] -rw-r--r-- 1 boincer umatlas      2519 Jan  9 00:01 pandaJob.out
[2026-01-09 01:43:45] -rw------- 1 boincer umatlas        57 Jan  9 00:01 setup.sh.local
[2026-01-09 01:43:45] -rw------- 1 boincer umatlas    989771 Jan  9 00:01 agis_schedconf.cvmfs.json
[2026-01-09 01:43:45] -rw------- 1 boincer umatlas   1516240 Jan  9 00:01 agis_ddmendpoints.agis.ALL.json
[2026-01-09 01:43:45] drwx------ 5 boincer umatlas      4096 Jan  9 00:01 pilot3
[2026-01-09 01:43:45] -rw-r--r-- 1 boincer umatlas      5953 Jan  9 01:36 init_data.xml
[2026-01-09 01:43:45] -rw------- 1 boincer umatlas 223096527 Jan  9 01:42 HITS.47898826._029066.pool.root.1
[2026-01-09 01:43:45] -rw------- 1 boincer umatlas      1047 Jan  9 01:42 memory_monitor_summary.json
[2026-01-09 01:43:45] -rw-r--r-- 1 boincer umatlas       529 Jan  9 01:42 boinc_task_state.xml
[2026-01-09 01:43:45] -rw------- 1 boincer umatlas    414334 Jan  9 01:42 log.47898826._029066.job.log.tgz.1
[2026-01-09 01:43:45] -rw------- 1 boincer umatlas        95 Jan  9 01:42 pilot_heartbeat.json
[2026-01-09 01:43:45] -rw------- 1 boincer umatlas      7847 Jan  9 01:42 heartbeat.json
[2026-01-09 01:43:45] -rw-r--r-- 1 boincer umatlas      8192 Jan  9 01:43 boinc_mmap_file
[2026-01-09 01:43:45] -rw-r--r-- 1 boincer umatlas        27 Jan  9 01:43 wrapper_checkpoint.txt
[2026-01-09 01:43:45] -rw------- 1 boincer umatlas      4818 Jan  9 01:43 pilotlog.txt
[2026-01-09 01:43:45] -rw------- 1 boincer umatlas    866232 Jan  9 01:43 log.47898826._029066.job.log.1
[2026-01-09 01:43:45] -rw------- 1 boincer umatlas       357 Jan  9 01:43 output.list
[2026-01-09 01:43:45] -rw-r--r-- 1 boincer umatlas       620 Jan  9 01:43 runtime_log
[2026-01-09 01:43:45] -rw------- 1 boincer umatlas   1300480 Jan  9 01:43 result.tar.gz
[2026-01-09 01:43:45] -rw------- 1 boincer umatlas       659 Jan  9 01:43 UIGODmff7x8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmsxkKDmBWV6em.diag
[2026-01-09 01:43:45] -rw-r--r-- 1 boincer umatlas      9344 Jan  9 01:43 runtime_log.err
[2026-01-09 01:43:45] -rw-r--r-- 1 boincer umatlas     21132 Jan  9 01:43 stderr.txt
[2026-01-09 01:43:45] HITS file was successfully produced:
[2026-01-09 01:43:45] -rw------- 1 boincer umatlas 223096527 Jan  9 01:42 shared/HITS.pool.root.1
[2026-01-09 01:43:45]  *** Contents of shared directory: ***
[2026-01-09 01:43:45] total 441440
[2026-01-09 01:43:45] -rw-r--r-- 2 boincer umatlas 227018089 Jan  9 00:01 ATLAS.root_0
[2026-01-09 01:43:45] -rw-r--r-- 2 boincer umatlas    592400 Jan  9 00:01 input.tar.gz
[2026-01-09 01:43:45] -rw-r--r-- 2 boincer umatlas     15847 Jan  9 00:01 start_atlas.sh
[2026-01-09 01:43:45] -rw------- 1 boincer umatlas 223096527 Jan  9 01:42 HITS.pool.root.1
[2026-01-09 01:43:45] -rw------- 1 boincer umatlas   1300480 Jan  9 01:43 result.tar.gz
01:43:47 (8297): run_atlas exited; CPU time 65957.333244
01:43:47 (8297): called boinc_finish(0)

</stderr_txt>
]]>

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