Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:41:33 (2112035): wrapper (7.7.26015): starting
21:41:33 (2112035): wrapper: running run_atlas (--nthreads 12)
[2026-01-08 21:41:33] Arguments: --nthreads 12
[2026-01-08 21:41:33] Threads: 12
[2026-01-08 21:41:33] Checking for CVMFS
[2026-01-08 21:41:33] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 21:41:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 21:41:34] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 21:41:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 21:41:35] 2.11.5.0 394429 91020 208696 154933 3 210 39847304 45568001 17261 130560 0 516202564 99.755 366933502 20975 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2026-01-08 21:41:35] CVMFS is ok
[2026-01-08 21:41:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-08 21:41:35] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-08 21:41:35] Further information can be found at the LHC@home message board.
[2026-01-08 21:41:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 21:41:35] Checking for apptainer binary...
[2026-01-08 21:41:35] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-08 21:41:35] Running /usr/bin/apptainer --version
[2026-01-08 21:41:35] apptainer version 1.4.1-1.el9
[2026-01-08 21:41:35] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 21:41:36] wns0074.triumf.lcg
[2026-01-08 21:41:36] apptainer works
[2026-01-08 21:41:36] Set ATHENA_PROC_NUMBER=12
[2026-01-08 21:41:36] Set ATHENA_CORE_NUMBER=12
[2026-01-08 21:41:36] Starting ATLAS job with PandaID=6963162385
[2026-01-08 21:41:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-08 21:47:33]  *** The last 200 lines of the pilot log: ***
[2026-01-08 21:47:33] 2026-01-09 05:46:44,057 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 21:47:33] 2026-01-09 05:46:44,057 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 21:47:33] 2026-01-09 05:46:44,057 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 21:47:33] 2026-01-09 05:46:44,058 | WARNING  | wrong length of table data, x=[1767937448.0], y=[1248.0] (must be same and length>=4)
[2026-01-08 21:47:33] 2026-01-09 05:46:44,058 | INFO     | could have reported an average CPU frequency of 1350 MHz (4 samples)
[2026-01-08 21:47:33] 2026-01-09 05:46:44,058 | INFO     | ..............................
[2026-01-08 21:47:33] 2026-01-09 05:46:44,059 | INFO     | . Timing measurements:
[2026-01-08 21:47:33] 2026-01-09 05:46:44,059 | INFO     | . get job = 0 s
[2026-01-08 21:47:33] 2026-01-09 05:46:44,059 | INFO     | . initial setup = 6 s
[2026-01-08 21:47:33] 2026-01-09 05:46:44,059 | INFO     | . payload setup = 18 s
[2026-01-08 21:47:33] 2026-01-09 05:46:44,059 | INFO     | . stage-in = 0 s
[2026-01-08 21:47:33] 2026-01-09 05:46:44,059 | INFO     | . payload execution = 45 s
[2026-01-08 21:47:33] 2026-01-09 05:46:44,059 | INFO     | . stage-out = 1 s
[2026-01-08 21:47:33] 2026-01-09 05:46:44,059 | INFO     | . log creation = 0 s
[2026-01-08 21:47:33] 2026-01-09 05:46:44,059 | INFO     | ..............................
[2026-01-08 21:47:33] 2026-01-09 05:46:44,059 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-08 21:47:33] 2026-01-09 05:46:44,060 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6963162385/pilotlog.txt
[2026-01-08 21:47:33] 2026-01-09 05:46:44,077 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-01-08 21:47:33] - Log from pilotlog.txt -
[2026-01-08 21:47:33] 2026-01-09 05:46:44,056 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6963162385/memory_monitor_summary.json (trf name=prmon)
[2026-01-08 21:47:33] 2026-01-09 05:46:44,056 | INFO     | extracted standard info from prmon json
[2026-01-08 21:47:33] 2026-01-09 05:46:44,057 | INFO     | extracted standard memory fields from prmon json
[2026-01-08 21:47:33] 2026-01-09 05:46:44,057 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 21:47:33] 2026-01-09 05:46:44,057 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 21:47:33] 2026-01-09 05:46:44,057 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 21:47:33] 2026-01-09 05:46:44,058 | WARNING  | wrong length of table data, x=[1767937448.0], y=[1248.0] (must be same and length>=4)
[2026-01-08 21:47:33] 2026-01-09 05:46:44,058 | INFO     | could have reported an average CPU frequency of 1350 MHz (4 samples)
[2026-01-08 21:47:33] 2026-01-09 05:46:44,058 | INFO     | ..............................
[2026-01-08 21:47:33] 2026-01-09 05:46:44,059 | INFO     | . Timing measurements:
[2026-01-08 21:47:33] 2026-01-09 05:46:44,059 | INFO     | . get job = 0 s
[2026-01-08 21:47:33] 2026-01-09 05:46:44,059 | INFO     | . initial setup = 6 s
[2026-01-08 21:47:33] 2026-01-09 05:46:44,059 | INFO     | . payload setup = 18 s
[2026-01-08 21:47:33] 2026-01-09 05:46:44,059 | INFO     | . stage-in = 0 s
[2026-01-08 21:47:33] 2026-01-09 05:46:44,059 | INFO     | . payload execution = 45 s
[2026-01-08 21:47:33] 2026-01-09 05:46:44,059 | INFO     | . stage-out = 1 s
[2026-01-08 21:47:33] 2026-01-09 05:46:44,059 | INFO     | . log creation = 0 s
[2026-01-08 21:47:33] 2026-01-09 05:46:44,059 | INFO     | ..............................
[2026-01-08 21:47:33] 2026-01-09 05:46:44,059 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-08 21:47:33] 2026-01-09 05:46:44,060 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6963162385/pilotlog.txt
[2026-01-08 21:47:33] 2026-01-09 05:46:44,078 | WARNING  | 
[2026-01-08 21:47:33] [begin log extracts]
[2026-01-08 21:47:33] - Log from pilotlog.txt -
[2026-01-08 21:47:33] 2026-01-09 05:46:44,056 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6963162385/memory_monitor_summary.json (trf name=prmon)
[2026-01-08 21:47:33] 2026-01-09 05:46:44,056 | INFO     | extracted standard info from prmon json
[2026-01-08 21:47:33] 2026-01-09 05:46:44,057 | INFO     | extracted standard memory fields from prmon json
[2026-01-08 21:47:33] 2026-01-09 05:46:44,057 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 21:47:33] 2026-01-09 05:46:44,057 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 21:47:33] 2026-01-09 05:46:44,057 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 21:47:33] 2026-01-09 05:46:44,058 | WARNING  | wrong length of table data, x=[1767937448.0], y=[1248.0] (must be same and length>=4)
[2026-01-08 21:47:33] 2026-01-09 05:46:44,058 | INFO     | could have reported an average CPU frequency of 1350 MHz (4 samples)
[2026-01-08 21:47:33] 2026-01-09 05:46:44,058 | INFO     | ..............................
[2026-01-08 21:47:33] 2026-01-09 05:46:44,059 | INFO     | . Timing measurements:
[2026-01-08 21:47:33] 2026-01-09 05:46:44,059 | INFO     | . get job = 0 s
[2026-01-08 21:47:33] 2026-01-09 05:46:44,059 | INFO     | . initial setup = 6 s
[2026-01-08 21:47:33] 2026-01-09 05:46:44,059 | INFO     | . payload setup = 18 s
[2026-01-08 21:47:33] 2026-01-09 05:46:44,059 | INFO     | . stage-in = 0 s
[2026-01-08 21:47:33] 2026-01-09 05:46:44,059 | INFO     | . payload execution = 45 s
[2026-01-08 21:47:33] 2026-01-09 05:46:44,059 | INFO     | . stage-out = 1 s
[2026-01-08 21:47:33] 2026-01-09 05:46:44,059 | INFO     | . log creation = 0 s
[2026-01-08 21:47:33] 2026-01-09 05:46:44,059 | INFO     | ..............................
[2026-01-08 21:47:33] 2026-01-09 05:46:44,059 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-08 21:47:33] 2026-01-09 05:46:44,060 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6963162385/pilotlog.txt
[2026-01-08 21:47:33] [end log extracts]
[2026-01-08 21:47:33] 2026-01-09 05:46:44,078 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2026-01-08 21:47:33] 2026-01-09 05:46:44,079 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-01-08 21:47:33] 2026-01-09 05:46:44,181 | INFO     | 
[2026-01-08 21:47:33] 2026-01-09 05:46:44,181 | INFO     | job summary report
[2026-01-08 21:47:33] 2026-01-09 05:46:44,181 | INFO     | --------------------------------------------------
[2026-01-08 21:47:33] 2026-01-09 05:46:44,181 | INFO     | PanDA job id: 6963162385
[2026-01-08 21:47:33] 2026-01-09 05:46:44,181 | INFO     | task id: 47898826
[2026-01-08 21:47:33] 2026-01-09 05:46:44,181 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-01-08 21:44:27,657 CRITICAL Transform executor raised TransformValidationExceptio
[2026-01-08 21:47:33] 2026-01-09 05:46:44,182 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-08 21:47:33] 2026-01-09 05:46:44,182 | INFO     | pilot state: failed 
[2026-01-08 21:47:33] 2026-01-09 05:46:44,182 | INFO     | transexitcode: 65
[2026-01-08 21:47:33] 2026-01-09 05:46:44,182 | INFO     | exeerrorcode: 65
[2026-01-08 21:47:33] 2026-01-09 05:46:44,182 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-01-08 21:47:33] 2026-01-09 05:46:44,182 | INFO     | exitcode: 65
[2026-01-08 21:47:33] 2026-01-09 05:46:44,182 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-01-08 21:47:33] 2026-01-09 05:46:44,182 | INFO     | cpuconsumptiontime: 31 s
[2026-01-08 21:47:33] 2026-01-09 05:46:44,182 | INFO     | nevents: 0
[2026-01-08 21:47:33] 2026-01-09 05:46:44,182 | INFO     | neventsw: 0
[2026-01-08 21:47:33] 2026-01-09 05:46:44,182 | INFO     | pid: 2130957
[2026-01-08 21:47:33] 2026-01-09 05:46:44,183 | INFO     | pgrp: 2130957
[2026-01-08 21:47:33] 2026-01-09 05:46:44,183 | INFO     | corecount: 12
[2026-01-08 21:47:33] 2026-01-09 05:46:44,183 | INFO     | event service: False
[2026-01-08 21:47:33] 2026-01-09 05:46:44,183 | INFO     | sizes: {0: 2283796, 1: 2283995, 2: 2283995, 14: 2284023, 25: 2284051, 31: 2284341, 36: 2284497, 67: 2307842, 68: 2312134, 70: 2312162, 195: 2312328}
[2026-01-08 21:47:33] 2026-01-09 05:46:44,183 | INFO     | --------------------------------------------------
[2026-01-08 21:47:33] 2026-01-09 05:46:44,183 | INFO     | 
[2026-01-08 21:47:33] 2026-01-09 05:46:44,183 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-01-08 21:47:33] 2026-01-09 05:46:44,209 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-08 21:47:33] 2026-01-09 05:46:44,210 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-08 21:47:33] 2026-01-09 05:46:44,210 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-08 21:47:33] 2026-01-09 05:46:44,210 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-08 21:47:33] 2026-01-09 05:46:44,210 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-08 21:47:33] 2026-01-09 05:46:44,210 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-08 21:47:33] 2026-01-09 05:46:44,210 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-08 21:47:33] 2026-01-09 05:46:44,210 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-08 21:47:33] 2026-01-09 05:46:44,210 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-08 21:47:33] 2026-01-09 05:46:44,210 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-08 21:47:33] 2026-01-09 05:46:44,211 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-08 21:47:33] 2026-01-09 05:46:44,211 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-08 21:47:33] 2026-01-09 05:46:44,211 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-08 21:47:33] 2026-01-09 05:46:44,211 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-08 21:47:33] 2026-01-09 05:46:44,211 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-08 21:47:33] 2026-01-09 05:46:44,211 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-08 21:47:33] 2026-01-09 05:46:44,211 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-08 21:47:33] 2026-01-09 05:46:44,211 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-08 21:47:33] 2026-01-09 05:46:44,211 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-08 21:47:33] 2026-01-09 05:46:44,211 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-08 21:47:33] 2026-01-09 05:46:44,212 | INFO     | job 6963162385 has completed (purged errors)
[2026-01-08 21:47:33] 2026-01-09 05:46:44,212 | INFO     | overall cleanup function is called
[2026-01-08 21:47:33] 2026-01-09 05:46:45,219 | INFO     | --- collectZombieJob: --- 10, [2130957]
[2026-01-08 21:47:33] 2026-01-09 05:46:45,220 | INFO     | zombie collector waiting for pid 2130957
[2026-01-08 21:47:33] 2026-01-09 05:46:45,220 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-08 21:47:33] 2026-01-09 05:46:45,220 | INFO     | collected zombie processes
[2026-01-08 21:47:33] 2026-01-09 05:46:45,220 | INFO     | will attempt to kill all subprocesses of pid=2130957
[2026-01-08 21:47:33] 2026-01-09 05:46:45,636 | INFO     | process IDs to be killed: [2130957] (in reverse order)
[2026-01-08 21:47:33] 2026-01-09 05:46:45,791 | WARNING  | found no corresponding commands to process id(s)
[2026-01-08 21:47:33] 2026-01-09 05:46:45,792 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-08 21:47:33] 2026-01-09 05:46:45,808 | INFO     | did not find any defunct processes belonging to 2130957
[2026-01-08 21:47:33] 2026-01-09 05:46:45,823 | INFO     | did not find any defunct processes belonging to 2130957
[2026-01-08 21:47:33] 2026-01-09 05:46:45,824 | INFO     | ready for new job
[2026-01-08 21:47:33] 2026-01-09 05:46:45,824 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-08 21:47:33] 2026-01-09 05:46:45,826 | INFO     | ***************************************
[2026-01-08 21:47:33] 2026-01-09 05:46:45,826 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-08 21:47:33] 2026-01-09 05:46:45,826 | INFO     | ***************************************
[2026-01-08 21:47:33] 2026-01-09 05:46:45,826 | INFO     | 
[2026-01-08 21:47:33] 2026-01-09 05:46:45,830 | INFO     | architecture information:
[2026-01-08 21:47:33] 2026-01-09 05:46:45,830 | INFO     | executing command: cat /etc/os-release
[2026-01-08 21:47:33] 2026-01-09 05:46:45,849 | INFO     | cat /etc/os-release:
[2026-01-08 21:47:33] NAME="CentOS Linux"
[2026-01-08 21:47:33] VERSION="7 (Core)"
[2026-01-08 21:47:33] ID="centos"
[2026-01-08 21:47:33] ID_LIKE="rhel fedora"
[2026-01-08 21:47:33] VERSION_ID="7"
[2026-01-08 21:47:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-08 21:47:33] ANSI_COLOR="0;31"
[2026-01-08 21:47:33] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-08 21:47:33] HOME_URL="https://www.centos.org/"
[2026-01-08 21:47:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-08 21:47:33] 
[2026-01-08 21:47:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-08 21:47:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-08 21:47:33] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-08 21:47:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-08 21:47:33] 
[2026-01-08 21:47:33] 2026-01-09 05:46:45,850 | INFO     | ***************************************
[2026-01-08 21:47:33] 2026-01-09 05:46:46,353 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-01-08 21:47:33] 2026-01-09 05:46:46,380 | INFO     | sufficient remaining disk space (1608348860416 B)
[2026-01-08 21:47:33] 2026-01-09 05:46:46,380 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-08 21:47:33] 2026-01-09 05:46:46,380 | INFO     | current server update state: UPDATING_FINAL
[2026-01-08 21:47:33] 2026-01-09 05:46:46,381 | INFO     | update_server=False
[2026-01-08 21:47:33] 2026-01-09 05:46:46,381 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-08 21:47:33] 2026-01-09 05:46:46,381 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-08 21:47:33] 2026-01-09 05:46:46,529 | INFO     | all data control threads have been joined
[2026-01-08 21:47:33] 2026-01-09 05:46:46,649 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-08 21:47:33] 2026-01-09 05:46:46,649 | INFO     | aborting loop
[2026-01-08 21:47:33] 2026-01-09 05:46:46,892 | INFO     | all payload control threads have been joined
[2026-01-08 21:47:33] 2026-01-09 05:46:47,314 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-08 21:47:33] 2026-01-09 05:46:47,387 | INFO     | [job] retrieve thread has finished
[2026-01-08 21:47:33] 2026-01-09 05:46:47,463 | INFO     | all job control threads have been joined
[2026-01-08 21:47:33] 2026-01-09 05:46:47,535 | INFO     | [data] control thread has finished
[2026-01-08 21:47:33] 2026-01-09 05:46:47,656 | INFO     | [job] job monitor thread has finished
[2026-01-08 21:47:33] 2026-01-09 05:46:47,792 | INFO     | [payload] execute_payloads thread has finished
[2026-01-08 21:47:33] 2026-01-09 05:46:47,861 | INFO     | [job] validate thread has finished
[2026-01-08 21:47:33] 2026-01-09 05:46:47,899 | INFO     | [payload] control thread has finished
[2026-01-08 21:47:33] 2026-01-09 05:46:48,167 | INFO     | [payload] validate_post thread has finished
[2026-01-08 21:47:33] 2026-01-09 05:46:48,308 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-08 21:47:33] 2026-01-09 05:46:48,347 | INFO     | [job] create_data_payload thread has finished
[2026-01-08 21:47:33] 2026-01-09 05:46:48,369 | INFO     | [data] copytool_in thread has finished
[2026-01-08 21:47:33] 2026-01-09 05:46:48,387 | INFO     | [data] copytool_out thread has finished
[2026-01-08 21:47:33] 2026-01-09 05:46:48,468 | INFO     | [job] control thread has finished
[2026-01-08 21:47:33] 2026-01-09 05:46:48,657 | INFO     | [payload] validate_pre thread has finished
[2026-01-08 21:47:33] 2026-01-09 05:46:48,868 | INFO     | [payload] failed_post thread has finished
[2026-01-08 21:47:33] 2026-01-09 05:46:49,196 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-08 21:47:33] 2026-01-09 05:46:50,205 | INFO     | [job] queue monitor thread has finished
[2026-01-08 21:47:33] 2026-01-09 05:46:51,321 | INFO     | [data] queue_monitor thread has finished
[2026-01-08 21:47:33] 2026-01-09 05:47:15,826 | INFO     | PID=2116967 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-08 21:47:33] 2026-01-09 05:47:15,827 | INFO     | .. there are 42 such processes running
[2026-01-08 21:47:33] 2026-01-09 05:47:15,827 | INFO     | found 0 job(s) in 20 queues
[2026-01-08 21:47:33] 2026-01-09 05:47:15,827 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-08 21:47:33] 2026-01-09 05:47:15,827 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-08 21:47:33] 2026-01-09 05:47:26,144 | INFO     | [monitor] cgroup control has ended
[2026-01-08 21:47:33] 2026-01-09 05:47:28,110 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139984325601088)>', '<ExcThread(monitor, started 139983612520192)>']
[2026-01-08 21:47:33] 2026-01-09 05:47:28,910 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-08 21:47:33] 2026-01-09 05:47:28,910 | INFO     | [monitor] control thread has ended
[2026-01-08 21:47:33] 2026-01-09 05:47:33,135 | INFO     | all workflow threads have been joined
[2026-01-08 21:47:33] 2026-01-09 05:47:33,136 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-08 21:47:33] 2026-01-09 05:47:33,136 | INFO     | traces error code: 0
[2026-01-08 21:47:33] 2026-01-09 05:47:33,137 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-08 21:47:33] 2026-01-09 05:47:33,370 [wrapper] ==== pilot stdout END ====
[2026-01-08 21:47:33] 2026-01-09 05:47:33,373 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-08 21:47:33] 2026-01-09 05:47:33,377 [wrapper] pilotpid: 2116967
[2026-01-08 21:47:33] 2026-01-09 05:47:33,380 [wrapper] Pilot exit status: 0
[2026-01-08 21:47:33] 2026-01-09 05:47:33,396 [wrapper] pandaids: 6963162385
[2026-01-08 21:47:33] 2026-01-09 05:47:33,491 [wrapper] cleanup supervisor_pilot 2116973 2116968
[2026-01-08 21:47:33] 2026-01-09 05:47:33,494 [wrapper] Test setup, not cleaning
[2026-01-08 21:47:33] 2026-01-09 05:47:33,498 [wrapper] apfmon messages muted
[2026-01-08 21:47:33] 2026-01-09 05:47:33,501 [wrapper] ==== wrapper stdout END ====
[2026-01-08 21:47:33] 2026-01-09 05:47:33,504 [wrapper] ==== wrapper stderr END ====
[2026-01-08 21:47:33]  *** Error codes and diagnostics ***
[2026-01-08 21:47:33]     "exeErrorCode": 65,
[2026-01-08 21:47:33]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-01-08 21:47:33]     "pilotErrorCode": 1305,
[2026-01-08 21:47:33]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-01-08 21:47:33]  *** Listing of results directory ***
[2026-01-08 21:47:33] total 222440
[2026-01-08 21:47:33] -rw-r--r--. 1 boinc boinc    579449 Jan  8 13:44 pilot3.tar.gz
[2026-01-08 21:47:33] -rwx------. 1 boinc boinc     36322 Jan  8 13:49 runpilot2-wrapper.sh
[2026-01-08 21:47:33] -rw-r--r--. 1 boinc boinc      5112 Jan  8 13:51 queuedata.json
[2026-01-08 21:47:33] -rw-r--r--. 1 boinc boinc       100 Jan  8 21:41 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-08 21:47:33] -rwxr-xr-x. 1 boinc boinc      7986 Jan  8 21:41 run_atlas
[2026-01-08 21:47:33] -rw-r--r--. 1 boinc boinc       105 Jan  8 21:41 job.xml
[2026-01-08 21:47:33] -rw-r--r--. 2 boinc boinc 223633642 Jan  8 21:41 EVNT.47898824._001296.pool.root.1
[2026-01-08 21:47:33] -rw-r--r--. 1 boinc boinc      6594 Jan  8 21:41 init_data.xml
[2026-01-08 21:47:33] drwxrwx--x. 2 boinc boinc      4096 Jan  8 21:41 shared
[2026-01-08 21:47:33] -rw-r--r--. 2 boinc boinc    592400 Jan  8 21:41 input.tar.gz
[2026-01-08 21:47:33] -rw-r--r--. 2 boinc boinc     15847 Jan  8 21:41 start_atlas.sh
[2026-01-08 21:47:33] -rw-r--r--. 1 boinc boinc         0 Jan  8 21:41 boinc_lockfile
[2026-01-08 21:47:33] -rw-r--r--. 1 boinc boinc      2519 Jan  8 21:41 pandaJob.out
[2026-01-08 21:47:33] -rw-------. 1 boinc boinc    989771 Jan  8 21:42 agis_schedconf.cvmfs.json
[2026-01-08 21:47:33] -rw-------. 1 boinc boinc   1516240 Jan  8 21:42 agis_ddmendpoints.agis.ALL.json
[2026-01-08 21:47:33] drwx------. 5 boinc boinc      4096 Jan  8 21:42 pilot3
[2026-01-08 21:47:33] -rw-r--r--. 1 boinc boinc       525 Jan  8 21:44 boinc_task_state.xml
[2026-01-08 21:47:33] -rw-------. 1 boinc boinc       983 Jan  8 21:44 memory_monitor_summary.json
[2026-01-08 21:47:33] -rw-------. 1 boinc boinc     22437 Jan  8 21:44 log.47898826._034006.job.log.tgz.1
[2026-01-08 21:47:33] -rw-------. 1 boinc boinc        95 Jan  8 21:46 pilot_heartbeat.json
[2026-01-08 21:47:33] -rw-------. 1 boinc boinc      8427 Jan  8 21:46 heartbeat.json
[2026-01-08 21:47:33] -rw-r--r--. 1 boinc boinc      8192 Jan  8 21:47 boinc_mmap_file
[2026-01-08 21:47:33] -rw-------. 1 boinc boinc      4823 Jan  8 21:47 pilotlog.txt
[2026-01-08 21:47:33] -rw-r--r--. 1 boinc boinc        23 Jan  8 21:47 wrapper_checkpoint.txt
[2026-01-08 21:47:33] -rw-------. 1 boinc boinc     91117 Jan  8 21:47 log.47898826._034006.job.log.1
[2026-01-08 21:47:33] -rw-------. 1 boinc boinc       188 Jan  8 21:47 output.list
[2026-01-08 21:47:33] -rw-r--r--. 1 boinc boinc       620 Jan  8 21:47 runtime_log
[2026-01-08 21:47:33] -rw-------. 1 boinc boinc    133120 Jan  8 21:47 result.tar.gz
[2026-01-08 21:47:33] -rw-r--r--. 1 boinc boinc      8636 Jan  8 21:47 runtime_log.err
[2026-01-08 21:47:33] -rw-------. 1 boinc boinc       644 Jan  8 21:47 4rQNDmB4Cy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmRglKDmu2vgwn.diag
[2026-01-08 21:47:33] -rw-r--r--. 1 boinc boinc     21830 Jan  8 21:47 stderr.txt
[2026-01-08 21:47:33] No HITS result produced
[2026-01-08 21:47:33]  *** Contents of shared directory: ***
[2026-01-08 21:47:33] total 219128
[2026-01-08 21:47:33] -rw-r--r--. 2 boinc boinc 223633642 Jan  8 21:41 ATLAS.root_0
[2026-01-08 21:47:33] -rw-r--r--. 2 boinc boinc    592400 Jan  8 21:41 input.tar.gz
[2026-01-08 21:47:33] -rw-r--r--. 2 boinc boinc     15847 Jan  8 21:41 start_atlas.sh
[2026-01-08 21:47:33] -rw-------. 1 boinc boinc    133120 Jan  8 21:47 result.tar.gz
21:47:35 (2112035): run_atlas exited; CPU time 42.590850
21:47:35 (2112035): called boinc_finish(0)

</stderr_txt>
]]>

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