Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:00:47 (2220150): wrapper (7.7.26015): starting
00:00:47 (2220150): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 00:00:47] Arguments: --nthreads 8
[2026-01-09 00:00:47] Threads: 8
[2026-01-09 00:00:47] Checking for CVMFS
[2026-01-09 00:00:49] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 00:00:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 00:00:50] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 00:00:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 00:00:51] 2.13.3.0 9734 20628 183048 154931 1 198 33474627 39288832 8427 16776704 0 9734530 99.280 16072350 36637 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-09 00:00:51] CVMFS is ok
[2026-01-09 00:00:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 00:00:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 00:00:51] Further information can be found at the LHC@home message board.
[2026-01-09 00:00:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 00:00:51] Checking for apptainer binary...
[2026-01-09 00:00:51] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 00:00:51] Running /usr/bin/apptainer --version
[2026-01-09 00:00:51] apptainer version 1.4.5-2.el9
[2026-01-09 00:00:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 00:00:51] c-210-4.aglt2.org
[2026-01-09 00:00:51] apptainer works
[2026-01-09 00:00:52] Set ATHENA_PROC_NUMBER=8
[2026-01-09 00:00:52] Set ATHENA_CORE_NUMBER=8
[2026-01-09 00:00:52] Starting ATLAS job with PandaID=6963162383
[2026-01-09 00:00:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 22:28:36]  *** The last 200 lines of the pilot log: ***
[2026-01-09 22:28:36] 2026-01-10 03:28:03,318 | INFO     | time since job start (80725s) is within the limit (349056.0s)
[2026-01-09 22:28:36] 2026-01-10 03:28:03,774 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 22:28:36] 2026-01-10 03:28:03,781 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2599.967925
[2026-01-09 22:28:36] 2026-01-10 03:28:03,787 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6963162383/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 22:28:36] 2026-01-10 03:28:03,788 | INFO     | extracted standard info from prmon json
[2026-01-09 22:28:36] 2026-01-10 03:28:03,788 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 22:28:36] 2026-01-10 03:28:03,788 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 22:28:36] 2026-01-10 03:28:03,789 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 22:28:36] 2026-01-10 03:28:03,789 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 22:28:36] 2026-01-10 03:28:03,813 | INFO     | fitting pss+swap vs Time
[2026-01-09 22:28:36] 2026-01-10 03:28:03,815 | INFO     | sum of square deviations: 713151653338.5388
[2026-01-09 22:28:36] 2026-01-10 03:28:03,858 | INFO     | sum of deviations: 2369277853688.7783
[2026-01-09 22:28:36] 2026-01-10 03:28:03,859 | INFO     | mean x: 1767975410.1568182
[2026-01-09 22:28:36] 2026-01-10 03:28:03,859 | INFO     | mean y: 2479317.213636364
[2026-01-09 22:28:36] 2026-01-10 03:28:03,859 | INFO     | intersect: -5871201218.393865
[2026-01-09 22:28:36] 2026-01-10 03:28:03,861 | INFO     | chi2: 6.955364711933043
[2026-01-09 22:28:36] 2026-01-10 03:28:03,863 | INFO     | sum of square deviations: 705078643399.761
[2026-01-09 22:28:36] 2026-01-10 03:28:03,907 | INFO     | sum of deviations: 2349634961857.457
[2026-01-09 22:28:36] 2026-01-10 03:28:03,907 | INFO     | mean x: 1767975257.663118
[2026-01-09 22:28:36] 2026-01-10 03:28:03,908 | INFO     | mean y: 2478946.170342205
[2026-01-09 22:28:36] 2026-01-10 03:28:03,908 | INFO     | intersect: -5889199260.212296
[2026-01-09 22:28:36] 2026-01-10 03:28:03,909 | INFO     | chi2: 6.955467293764543
[2026-01-09 22:28:36] 2026-01-10 03:28:03,910 | INFO     | current chi2=6.955467293764543 (change=-0.001474859130310787 %)
[2026-01-09 22:28:36] 2026-01-10 03:28:03,910 | INFO     | right removable region: 1314
[2026-01-09 22:28:36] 2026-01-10 03:28:03,911 | INFO     | sum of square deviations: 705077389608.0863
[2026-01-09 22:28:36] 2026-01-10 03:28:03,955 | INFO     | sum of deviations: 1952021390531.0386
[2026-01-09 22:28:36] 2026-01-10 03:28:03,955 | INFO     | mean x: 1767975562.6623573
[2026-01-09 22:28:36] 2026-01-10 03:28:03,955 | INFO     | mean y: 2487196.06539924
[2026-01-09 22:28:36] 2026-01-10 03:28:03,955 | INFO     | intersect: -4892189852.324084
[2026-01-09 22:28:36] 2026-01-10 03:28:03,957 | INFO     | chi2: 3.3583871589574166
[2026-01-09 22:28:36] 2026-01-10 03:28:03,957 | INFO     | current chi2=3.3583871589574166 (change=51.715153725935245 %)
[2026-01-09 22:28:36] 2026-01-10 03:28:03,959 | INFO     | sum of square deviations: 697064290059.0533
[2026-01-09 22:28:36] 2026-01-10 03:28:04,003 | INFO     | sum of deviations: 1669849014150.0972
[2026-01-09 22:28:36] 2026-01-10 03:28:04,003 | INFO     | mean x: 1767975715.167939
[2026-01-09 22:28:36] 2026-01-10 03:28:04,003 | INFO     | mean y: 2492564.6404580153
[2026-01-09 22:28:36] 2026-01-10 03:28:04,004 | INFO     | intersect: -4232773173.566256
[2026-01-09 22:28:36] 2026-01-10 03:28:04,005 | INFO     | chi2: 1.788092951960504
[2026-01-09 22:28:36] 2026-01-10 03:28:04,005 | INFO     | current chi2=1.788092951960504 (change=46.75739075551961 %)
[2026-01-09 22:28:36] 2026-01-10 03:28:04,007 | INFO     | sum of square deviations: 689112361863.9723
[2026-01-09 22:28:36] 2026-01-10 03:28:04,053 | INFO     | sum of deviations: 1516161270166.7612
[2026-01-09 22:28:36] 2026-01-10 03:28:04,053 | INFO     | mean x: 1767975867.6712644
[2026-01-09 22:28:36] 2026-01-10 03:28:04,054 | INFO     | mean y: 2495512.1509578545
[2026-01-09 22:28:36] 2026-01-10 03:28:04,054 | INFO     | intersect: -3887344063.3604913
[2026-01-09 22:28:36] 2026-01-10 03:28:04,055 | INFO     | chi2: 1.378885821968463
[2026-01-09 22:28:36] 2026-01-10 03:28:04,056 | INFO     | current chi2=1.378885821968463 (change=22.885115091101802 %)
[2026-01-09 22:28:36] 2026-01-10 03:28:04,056 | INFO     | left removable region: 30
[2026-01-09 22:28:36] 2026-01-10 03:28:04,057 | INFO     | sum of square deviations: 656375908946.5142
[2026-01-09 22:28:36] 2026-01-10 03:28:04,098 | INFO     | sum of deviations: 1126835894246.0376
[2026-01-09 22:28:36] 2026-01-10 03:28:04,099 | INFO     | mean x: 1767976142.186137
[2026-01-09 22:28:36] 2026-01-10 03:28:04,099 | INFO     | mean y: 2502400.058411215
[2026-01-09 22:28:36] 2026-01-10 03:28:04,099 | INFO     | intersect: -3032677517.4731364
[2026-01-09 22:28:36] 2026-01-10 03:28:04,101 | INFO     | chi2: 0.5741920570266615
[2026-01-09 22:28:36] 2026-01-10 03:28:04,101 | INFO     | current memory leak: 1.72 B/s (using 1284 data points, chi2=0.57)
[2026-01-09 22:28:36] 2026-01-10 03:28:04,102 | INFO     | could have reported an average CPU frequency of 2601 MHz (47 samples)
[2026-01-09 22:28:36] 2026-01-10 03:28:04,103 | INFO     | ..............................
[2026-01-09 22:28:36] 2026-01-10 03:28:04,103 | INFO     | . Timing measurements:
[2026-01-09 22:28:36] 2026-01-10 03:28:04,103 | INFO     | . get job = 1 s
[2026-01-09 22:28:36] 2026-01-10 03:28:04,103 | INFO     | . initial setup = 10 s
[2026-01-09 22:28:36] 2026-01-10 03:28:04,103 | INFO     | . payload setup = 64 s
[2026-01-09 22:28:36] 2026-01-10 03:28:04,103 | INFO     | . stage-in = 0 s
[2026-01-09 22:28:36] 2026-01-10 03:28:04,103 | INFO     | . payload execution = 80540 s
[2026-01-09 22:28:36] 2026-01-10 03:28:04,103 | INFO     | . stage-out = 2 s
[2026-01-09 22:28:36] 2026-01-10 03:28:04,103 | INFO     | . log creation = 0 s
[2026-01-09 22:28:36] 2026-01-10 03:28:04,103 | INFO     | ..............................
[2026-01-09 22:28:36] 2026-01-10 03:28:04,251 | INFO     | 
[2026-01-09 22:28:36] 2026-01-10 03:28:04,251 | INFO     | job summary report
[2026-01-09 22:28:36] 2026-01-10 03:28:04,251 | INFO     | --------------------------------------------------
[2026-01-09 22:28:36] 2026-01-10 03:28:04,252 | INFO     | PanDA job id: 6963162383
[2026-01-09 22:28:36] 2026-01-10 03:28:04,252 | INFO     | task id: 47898826
[2026-01-09 22:28:36] 2026-01-10 03:28:04,252 | INFO     | errors: (none)
[2026-01-09 22:28:36] 2026-01-10 03:28:04,252 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 22:28:36] 2026-01-10 03:28:04,252 | INFO     | pilot state: finished 
[2026-01-09 22:28:36] 2026-01-10 03:28:04,252 | INFO     | transexitcode: 0
[2026-01-09 22:28:36] 2026-01-10 03:28:04,252 | INFO     | exeerrorcode: 0
[2026-01-09 22:28:36] 2026-01-10 03:28:04,252 | INFO     | exeerrordiag: 
[2026-01-09 22:28:36] 2026-01-10 03:28:04,252 | INFO     | exitcode: 0
[2026-01-09 22:28:36] 2026-01-10 03:28:04,252 | INFO     | exitmsg: OK
[2026-01-09 22:28:36] 2026-01-10 03:28:04,252 | INFO     | cpuconsumptiontime: 67610 s
[2026-01-09 22:28:36] 2026-01-10 03:28:04,252 | INFO     | nevents: 400
[2026-01-09 22:28:36] 2026-01-10 03:28:04,253 | INFO     | neventsw: 0
[2026-01-09 22:28:36] 2026-01-10 03:28:04,253 | INFO     | pid: 2270093
[2026-01-09 22:28:36] 2026-01-10 03:28:04,253 | INFO     | pgrp: 2270093
[2026-01-09 22:28:36] 2026-01-10 03:28:04,253 | INFO     | corecount: 8
[2026-01-09 22:28:36] 2026-01-10 03:28:04,253 | INFO     | event service: False
[2026-01-09 22:28:36] 2026-01-10 03:28:04,253 | INFO     | sizes: {0: 2283743, 1: 2283827, 2: 2284026, 14: 2284026, 26: 2284054, 37: 2284082, 49: 2284500, 60: 2284528, 80609: 2343778, 80611: 2352776, 80614: 2352832, 80618:
[2026-01-09 22:28:36] 2026-01-10 03:28:04,253 | INFO     | --------------------------------------------------
[2026-01-09 22:28:36] 2026-01-10 03:28:04,253 | INFO     | 
[2026-01-09 22:28:36] 2026-01-10 03:28:04,253 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2026-01-09 22:28:36] 2026-01-10 03:28:04,270 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 22:28:36] 2026-01-10 03:28:04,270 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 22:28:36] 2026-01-10 03:28:04,270 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 22:28:36] 2026-01-10 03:28:04,270 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 22:28:36] 2026-01-10 03:28:04,270 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 22:28:36] 2026-01-10 03:28:04,270 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 22:28:36] 2026-01-10 03:28:04,270 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 22:28:36] 2026-01-10 03:28:04,270 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 22:28:36] 2026-01-10 03:28:04,271 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 22:28:36] 2026-01-10 03:28:04,271 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 22:28:36] 2026-01-10 03:28:04,271 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 22:28:36] 2026-01-10 03:28:04,271 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 22:28:36] 2026-01-10 03:28:04,271 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 22:28:36] 2026-01-10 03:28:04,271 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 22:28:36] 2026-01-10 03:28:04,271 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 22:28:36] 2026-01-10 03:28:04,271 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 22:28:36] 2026-01-10 03:28:04,271 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 22:28:36] 2026-01-10 03:28:04,271 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 22:28:36] 2026-01-10 03:28:04,271 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 22:28:36] 2026-01-10 03:28:04,271 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 22:28:36] 2026-01-10 03:28:04,272 | INFO     | job 6963162383 has completed (purged errors)
[2026-01-09 22:28:36] 2026-01-10 03:28:04,272 | INFO     | overall cleanup function is called
[2026-01-09 22:28:36] 2026-01-10 03:28:05,280 | INFO     | --- collectZombieJob: --- 10, [2270093]
[2026-01-09 22:28:36] 2026-01-10 03:28:05,281 | INFO     | zombie collector waiting for pid 2270093
[2026-01-09 22:28:36] 2026-01-10 03:28:05,281 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 22:28:36] 2026-01-10 03:28:05,281 | INFO     | collected zombie processes
[2026-01-09 22:28:36] 2026-01-10 03:28:05,281 | INFO     | will attempt to kill all subprocesses of pid=2270093
[2026-01-09 22:28:36] 2026-01-10 03:28:05,474 | INFO     | process IDs to be killed: [2270093] (in reverse order)
[2026-01-09 22:28:36] 2026-01-10 03:28:05,538 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 22:28:36] 2026-01-10 03:28:05,538 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 22:28:36] 2026-01-10 03:28:05,545 | INFO     | did not find any defunct processes belonging to 2270093
[2026-01-09 22:28:36] 2026-01-10 03:28:05,551 | INFO     | did not find any defunct processes belonging to 2270093
[2026-01-09 22:28:36] 2026-01-10 03:28:05,552 | INFO     | ready for new job
[2026-01-09 22:28:36] 2026-01-10 03:28:05,552 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 22:28:36] 2026-01-10 03:28:05,557 | INFO     | ***************************************
[2026-01-09 22:28:36] 2026-01-10 03:28:05,558 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 22:28:36] 2026-01-10 03:28:05,558 | INFO     | ***************************************
[2026-01-09 22:28:36] 2026-01-10 03:28:05,558 | INFO     | 
[2026-01-09 22:28:36] 2026-01-10 03:28:05,560 | INFO     | architecture information:
[2026-01-09 22:28:36] 2026-01-10 03:28:05,560 | INFO     | executing command: cat /etc/os-release
[2026-01-09 22:28:36] 2026-01-10 03:28:05,573 | INFO     | cat /etc/os-release:
[2026-01-09 22:28:36] NAME="CentOS Linux"
[2026-01-09 22:28:36] VERSION="7 (Core)"
[2026-01-09 22:28:36] ID="centos"
[2026-01-09 22:28:36] ID_LIKE="rhel fedora"
[2026-01-09 22:28:36] VERSION_ID="7"
[2026-01-09 22:28:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 22:28:36] ANSI_COLOR="0;31"
[2026-01-09 22:28:36] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 22:28:36] HOME_URL="https://www.centos.org/"
[2026-01-09 22:28:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 22:28:36] 
[2026-01-09 22:28:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 22:28:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 22:28:36] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 22:28:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 22:28:36] 
[2026-01-09 22:28:36] 2026-01-10 03:28:05,573 | INFO     | ***************************************
[2026-01-09 22:28:36] 2026-01-10 03:28:06,076 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2026-01-09 22:28:36] 2026-01-10 03:28:06,090 | INFO     | sufficient remaining disk space (53770977280 B)
[2026-01-09 22:28:36] 2026-01-10 03:28:06,090 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 22:28:36] 2026-01-10 03:28:06,090 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 22:28:36] 2026-01-10 03:28:06,091 | INFO     | update_server=False
[2026-01-09 22:28:36] 2026-01-10 03:28:06,091 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 22:28:36] 2026-01-10 03:28:06,091 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 22:28:36] 2026-01-10 03:28:06,091 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 22:28:36] 2026-01-10 03:28:06,091 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 22:28:36] 2026-01-10 03:28:06,091 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 22:28:36] 2026-01-10 03:28:06,091 | INFO     | aborting loop
[2026-01-09 22:28:36] 2026-01-10 03:28:06,313 | INFO     | all job control threads have been joined
[2026-01-09 22:28:36] 2026-01-10 03:28:06,523 | INFO     | all payload control threads have been joined
[2026-01-09 22:28:36] 2026-01-10 03:28:06,702 | INFO     | all data control threads have been joined
[2026-01-09 22:28:36] 2026-01-10 03:28:07,096 | INFO     | [job] retrieve thread has finished
[2026-01-09 22:28:36] 2026-01-10 03:28:07,097 | INFO     | [job] queue monitor thread has finished
[2026-01-09 22:28:36] 2026-01-10 03:28:07,097 | INFO     | [job] job monitor thread has finished
[2026-01-09 22:28:36] 2026-01-10 03:28:07,319 | INFO     | [job] control thread has finished
[2026-01-09 22:28:36] 2026-01-10 03:28:07,435 | INFO     | [data] copytool_in thread has finished
[2026-01-09 22:28:36] 2026-01-10 03:28:07,528 | INFO     | [payload] control thread has finished
[2026-01-09 22:28:36] 2026-01-10 03:28:07,556 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 22:28:36] 2026-01-10 03:28:07,708 | INFO     | [data] control thread has finished
[2026-01-09 22:28:36] 2026-01-10 03:28:07,766 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 22:28:36] 2026-01-10 03:28:08,045 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 22:28:36] 2026-01-10 03:28:08,086 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 22:28:36] 2026-01-10 03:28:08,097 | INFO     | [data] copytool_out thread has finished
[2026-01-09 22:28:36] 2026-01-10 03:28:08,391 | INFO     | [payload] failed_post thread has finished
[2026-01-09 22:28:36] 2026-01-10 03:28:08,461 | INFO     | [payload] validate_post thread has finished
[2026-01-09 22:28:36] 2026-01-10 03:28:08,537 | INFO     | [job] validate thread has finished
[2026-01-09 22:28:36] 2026-01-10 03:28:10,098 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 22:28:36] 2026-01-10 03:28:26,559 | INFO     | [monitor] cgroup control has ended
[2026-01-09 22:28:36] 2026-01-10 03:28:28,502 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139862713272128)>', '<ExcThread(monitor, started 139862162261760)>']
[2026-01-09 22:28:36] 2026-01-10 03:28:33,527 | INFO     | all workflow threads have been joined
[2026-01-09 22:28:36] 2026-01-10 03:28:33,527 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 22:28:36] 2026-01-10 03:28:33,528 | INFO     | traces error code: 0
[2026-01-09 22:28:36] 2026-01-10 03:28:33,528 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 22:28:36] 2026-01-10 03:28:36,662 | INFO     | PID=2234968 has CPU usage=5.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 22:28:36] 2026-01-10 03:28:36,663 | INFO     | .. there are 6 such processes running
[2026-01-09 22:28:36] 2026-01-10 03:28:36,664 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 22:28:36] 2026-01-10 03:28:36,664 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 22:28:36] 2026-01-10 03:28:36,664 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 22:28:36] 2026-01-10 03:28:36,664 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 22:28:36] 2026-01-10 03:28:36,664 | CRITICAL | thread 'MainThread' is not alive
[2026-01-09 22:28:36] 2026-01-10 03:28:36,664 | INFO     | [monitor] control thread has ended
[2026-01-09 22:28:36] 2026-01-10 03:28:36,787 [wrapper] ==== pilot stdout END ====
[2026-01-09 22:28:36] 2026-01-10 03:28:36,789 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 22:28:36] 2026-01-10 03:28:36,792 [wrapper] pilotpid: 2234968
[2026-01-09 22:28:36] 2026-01-10 03:28:36,794 [wrapper] Pilot exit status: 0
[2026-01-09 22:28:36] 2026-01-10 03:28:36,803 [wrapper] pandaids: 6963162383
[2026-01-09 22:28:36] 2026-01-10 03:28:36,844 [wrapper] cleanup supervisor_pilot  253774 2234969
[2026-01-09 22:28:36] 2026-01-10 03:28:36,847 [wrapper] Test setup, not cleaning
[2026-01-09 22:28:36] 2026-01-10 03:28:36,849 [wrapper] apfmon messages muted
[2026-01-09 22:28:36] 2026-01-10 03:28:36,851 [wrapper] ==== wrapper stdout END ====
[2026-01-09 22:28:36] 2026-01-10 03:28:36,853 [wrapper] ==== wrapper stderr END ====
[2026-01-09 22:28:36]  *** Error codes and diagnostics ***
[2026-01-09 22:28:36]     "exeErrorCode": 0,
[2026-01-09 22:28:36]     "exeErrorDiag": "",
[2026-01-09 22:28:36]     "pilotErrorCode": 0,
[2026-01-09 22:28:36]     "pilotErrorDiag": "",
[2026-01-09 22:28:36]  *** Listing of results directory ***
[2026-01-09 22:28:36] total 464784
[2026-01-09 22:28:36] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 16:44 pilot3.tar.gz
[2026-01-09 22:28:36] -rwx------. 1 boincer umatlas     36322 Jan  8 16:49 runpilot2-wrapper.sh
[2026-01-09 22:28:36] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 16:51 queuedata.json
[2026-01-09 22:28:36] -rw-r--r--. 1 boincer umatlas       100 Jan  9 00:00 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 22:28:36] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 00:00 run_atlas
[2026-01-09 22:28:36] -rw-r--r--. 1 boincer umatlas       105 Jan  9 00:00 job.xml
[2026-01-09 22:28:36] -rw-r--r--. 2 boincer umatlas 223633642 Jan  9 00:00 EVNT.47898824._001296.pool.root.1
[2026-01-09 22:28:36] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 00:00 start_atlas.sh
[2026-01-09 22:28:36] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 00:00 shared
[2026-01-09 22:28:36] -rw-r--r--. 2 boincer umatlas    592396 Jan  9 00:00 input.tar.gz
[2026-01-09 22:28:36] -rw-r--r--. 1 boincer umatlas         0 Jan  9 00:00 boinc_lockfile
[2026-01-09 22:28:36] -rw-r--r--. 1 boincer umatlas      2519 Jan  9 00:00 pandaJob.out
[2026-01-09 22:28:36] -rw-------. 1 boincer umatlas        57 Jan  9 00:00 setup.sh.local
[2026-01-09 22:28:36] -rw-------. 1 boincer umatlas    989771 Jan  9 00:02 agis_schedconf.cvmfs.json
[2026-01-09 22:28:36] drwx------. 5 boincer umatlas      4096 Jan  9 00:02 pilot3
[2026-01-09 22:28:36] -rw-r--r--. 1 boincer umatlas      6658 Jan  9 22:21 init_data.xml
[2026-01-09 22:28:36] -rw-r--r--. 1 boincer umatlas       530 Jan  9 22:27 boinc_task_state.xml
[2026-01-09 22:28:36] -rw-------. 1 boincer umatlas 228196327 Jan  9 22:27 HITS.47898826._034004.pool.root.1
[2026-01-09 22:28:36] -rw-------. 1 boincer umatlas      1039 Jan  9 22:27 memory_monitor_summary.json
[2026-01-09 22:28:36] -rw-------. 1 boincer umatlas   1516240 Jan  9 22:27 agis_ddmendpoints.agis.ALL.json
[2026-01-09 22:28:36] -rw-------. 1 boincer umatlas   1197797 Jan  9 22:27 log.47898826._034004.job.log.tgz.1
[2026-01-09 22:28:36] -rw-------. 1 boincer umatlas      7819 Jan  9 22:28 heartbeat.json
[2026-01-09 22:28:36] -rw-r--r--. 1 boincer umatlas      8192 Jan  9 22:28 boinc_mmap_file
[2026-01-09 22:28:36] -rw-r--r--. 1 boincer umatlas        27 Jan  9 22:28 wrapper_checkpoint.txt
[2026-01-09 22:28:36] -rw-------. 1 boincer umatlas        95 Jan  9 22:28 pilot_heartbeat.json
[2026-01-09 22:28:36] -rw-------. 1 boincer umatlas       892 Jan  9 22:28 pilotlog.txt
[2026-01-09 22:28:36] -rw-------. 1 boincer umatlas   8901244 Jan  9 22:28 log.47898826._034004.job.log.1
[2026-01-09 22:28:36] -rw-------. 1 boincer umatlas       357 Jan  9 22:28 output.list
[2026-01-09 22:28:36] -rw-r--r--. 1 boincer umatlas       620 Jan  9 22:28 runtime_log
[2026-01-09 22:28:36] -rw-------. 1 boincer umatlas  10117120 Jan  9 22:28 result.tar.gz
[2026-01-09 22:28:36] -rw-r--r--. 1 boincer umatlas      9338 Jan  9 22:28 runtime_log.err
[2026-01-09 22:28:36] -rw-------. 1 boincer umatlas       656 Jan  9 22:28 plnNDmz3Cy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmPglKDmfrmNNm.diag
[2026-01-09 22:28:36] -rw-r--r--. 1 boincer umatlas     21184 Jan  9 22:28 stderr.txt
[2026-01-09 22:28:36] HITS file was successfully produced:
[2026-01-09 22:28:36] -rw-------. 1 boincer umatlas 228196327 Jan  9 22:27 shared/HITS.pool.root.1
[2026-01-09 22:28:36]  *** Contents of shared directory: ***
[2026-01-09 22:28:36] total 451724
[2026-01-09 22:28:36] -rw-r--r--. 2 boincer umatlas 223633642 Jan  9 00:00 ATLAS.root_0
[2026-01-09 22:28:36] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 00:00 start_atlas.sh
[2026-01-09 22:28:36] -rw-r--r--. 2 boincer umatlas    592396 Jan  9 00:00 input.tar.gz
[2026-01-09 22:28:36] -rw-------. 1 boincer umatlas 228196327 Jan  9 22:27 HITS.pool.root.1
[2026-01-09 22:28:36] -rw-------. 1 boincer umatlas  10117120 Jan  9 22:28 result.tar.gz
22:28:38 (2220150): run_atlas exited; CPU time 69761.727186
22:28:38 (2220150): called boinc_finish(0)

</stderr_txt>
]]>

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