Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
23:58:03 (16649): wrapper (7.7.26015): starting
23:58:03 (16649): wrapper: running run_atlas (--nthreads 12)
[2026-01-08 23:58:03] Arguments: --nthreads 12
[2026-01-08 23:58:03] Threads: 12
[2026-01-08 23:58:03] Checking for CVMFS
[2026-01-08 23:58:03] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 23:58:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 23:58:03] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 23:58:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 23:58:03] 2.11.2.0 723 180538 95920 154931 0 57 11470065 20275200 1 130560 0 70054310 99.901 10352350 36033 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-08 23:58:03] CVMFS is ok
[2026-01-08 23:58:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-08 23:58:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-08 23:58:03] Further information can be found at the LHC@home message board.
[2026-01-08 23:58:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 23:58:03] Checking for apptainer binary...
[2026-01-08 23:58:03] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-08 23:58:03] Running /usr/bin/apptainer --version
[2026-01-08 23:58:03] apptainer version 1.3.2-1.el7
[2026-01-08 23:58:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 23:58:05] c-205-1.aglt2.org
[2026-01-08 23:58:05] apptainer works
[2026-01-08 23:58:05] Set ATHENA_PROC_NUMBER=12
[2026-01-08 23:58:05] Set ATHENA_CORE_NUMBER=12
[2026-01-08 23:58:05] Starting ATLAS job with PandaID=6963162263
[2026-01-08 23:58:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 01:37:36]  *** The last 200 lines of the pilot log: ***
[2026-01-09 01:37:36]  is_tar=False
[2026-01-09 01:37:36]  lfn=log.47898826._033884.job.log.tgz.1
[2026-01-09 01:37:36]  mtime=0
[2026-01-09 01:37:36]  protocol_id=None
[2026-01-09 01:37:36]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-09 01:37:36]  replicas=None
[2026-01-09 01:37:36]  scope=mc23_13p6TeV
[2026-01-09 01:37:36]  status=None
[2026-01-09 01:37:36]  status_code=0
[2026-01-09 01:37:36]  storage_token=
[2026-01-09 01:37:36]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6963162263/log.47898826._033884.job.log.tgz.1
[2026-01-09 01:37:36]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/6f/ba/log.47898826._033884.job.log.tgz.1
[2026-01-09 01:37:36]  workdir=None
[2026-01-09 01:37:36] ]
[2026-01-09 01:37:36] 2026-01-09 06:36:46,189 | INFO     | transferring file log.47898826._033884.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6963162263/log.47898826._033884.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-09 01:37:36] 2026-01-09 06:36:46,189 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6963162263/log.47898826._033884.job.log.tgz.1 /tmp/boinchome/slots/0/log.47898826._033884.job
[2026-01-09 01:37:36] 2026-01-09 06:36:46,209 | INFO     | adding to output.list: log.47898826._033884.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/6f/ba/log.47898826._033884.job.log.tg
[2026-01-09 01:37:36] 2026-01-09 06:36:46,210 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-09 01:37:36] 2026-01-09 06:36:46,210 | INFO     | summary of transferred files:
[2026-01-09 01:37:36] 2026-01-09 06:36:46,210 | INFO     |  -- lfn=log.47898826._033884.job.log.tgz.1, status_code=0, status=transferred
[2026-01-09 01:37:36] 2026-01-09 06:36:46,210 | INFO     | stage-out finished correctly
[2026-01-09 01:37:36] 2026-01-09 06:36:46,475 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-09 01:37:36] 2026-01-09 06:36:46,709 | INFO     | job 6963162263 has state=finished
[2026-01-09 01:37:36] 2026-01-09 06:36:46,709 | INFO     | preparing for final server update for job 6963162263 in state='finished'
[2026-01-09 01:37:36] 2026-01-09 06:36:46,710 | INFO     | this job has now completed (state=finished)
[2026-01-09 01:37:36] 2026-01-09 06:36:46,710 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-09 01:37:36] 2026-01-09 06:36:46,710 | INFO     | log transfer has been attempted: DONE
[2026-01-09 01:37:36] 2026-01-09 06:36:46,711 | INFO     | job 6963162263 has finished - writing final server update
[2026-01-09 01:37:36] 2026-01-09 06:36:46,711 | INFO     | total number of processed events: 400 (read)
[2026-01-09 01:37:36] 2026-01-09 06:36:46,712 | INFO     | executing command: lscpu
[2026-01-09 01:37:36] 2026-01-09 06:36:46,735 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-09 01:37:36] 2026-01-09 06:36:47,642 | WARNING  | process 26784 can no longer be monitored (due to stat problems) - aborting
[2026-01-09 01:37:36] 2026-01-09 06:36:47,643 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6963162263/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 01:37:36] 2026-01-09 06:36:47,732 | INFO     | number of running child processes to parent process 26784: 1
[2026-01-09 01:37:36] 2026-01-09 06:36:47,732 | INFO     | maximum number of monitored processes: 6
[2026-01-09 01:37:36] 2026-01-09 06:36:47,836 | INFO     | time since job start (5907s) is within the limit (349056.0s)
[2026-01-09 01:37:36] 2026-01-09 06:36:49,842 | INFO     | time since job start (5909s) is within the limit (349056.0s)
[2026-01-09 01:37:36] 2026-01-09 06:36:50,235 | INFO     | monitor loop #436: job 0:6963162263 is in state 'finished'
[2026-01-09 01:37:36] 2026-01-09 06:36:50,235 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 01:37:36] 2026-01-09 06:36:51,478 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-09 01:37:36] 2026-01-09 06:36:51,482 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1684.75
[2026-01-09 01:37:36] 2026-01-09 06:36:51,484 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6963162263/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 01:37:36] 2026-01-09 06:36:51,485 | INFO     | extracted standard info from prmon json
[2026-01-09 01:37:36] 2026-01-09 06:36:51,485 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 01:37:36] 2026-01-09 06:36:51,486 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 01:37:36] 2026-01-09 06:36:51,486 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 01:37:36] 2026-01-09 06:36:51,486 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 01:37:36] 2026-01-09 06:36:51,488 | INFO     | fitting pss+swap vs Time
[2026-01-09 01:37:36] 2026-01-09 06:36:51,488 | INFO     | sum of square deviations: 226022842.5
[2026-01-09 01:37:36] 2026-01-09 06:36:51,489 | INFO     | sum of deviations: -3088677263.5
[2026-01-09 01:37:36] 2026-01-09 06:36:51,489 | INFO     | mean x: 1767937748.5
[2026-01-09 01:37:36] 2026-01-09 06:36:51,489 | INFO     | mean y: 2690697.3666666667
[2026-01-09 01:37:36] 2026-01-09 06:36:51,489 | INFO     | intersect: 24162147620.73197
[2026-01-09 01:37:36] 2026-01-09 06:36:51,489 | INFO     | chi2: 0.042770643308332565
[2026-01-09 01:37:36] 2026-01-09 06:36:51,489 | INFO     | current memory leak: -13.67 B/s (using 90 data points, chi2=0.04)
[2026-01-09 01:37:36] 2026-01-09 06:36:51,490 | INFO     | could have reported an average CPU frequency of 2125 MHz (7 samples)
[2026-01-09 01:37:36] 2026-01-09 06:36:51,490 | INFO     | ..............................
[2026-01-09 01:37:36] 2026-01-09 06:36:51,490 | INFO     | . Timing measurements:
[2026-01-09 01:37:36] 2026-01-09 06:36:51,490 | INFO     | . get job = 0 s
[2026-01-09 01:37:36] 2026-01-09 06:36:51,490 | INFO     | . initial setup = 2 s
[2026-01-09 01:37:36] 2026-01-09 06:36:51,490 | INFO     | . payload setup = 7 s
[2026-01-09 01:37:36] 2026-01-09 06:36:51,490 | INFO     | . stage-in = 0 s
[2026-01-09 01:37:36] 2026-01-09 06:36:51,491 | INFO     | . payload execution = 5878 s
[2026-01-09 01:37:36] 2026-01-09 06:36:51,491 | INFO     | . stage-out = 0 s
[2026-01-09 01:37:36] 2026-01-09 06:36:51,491 | INFO     | . log creation = 0 s
[2026-01-09 01:37:36] 2026-01-09 06:36:51,491 | INFO     | ..............................
[2026-01-09 01:37:36] 2026-01-09 06:36:51,571 | INFO     | 
[2026-01-09 01:37:36] 2026-01-09 06:36:51,572 | INFO     | job summary report
[2026-01-09 01:37:36] 2026-01-09 06:36:51,572 | INFO     | --------------------------------------------------
[2026-01-09 01:37:36] 2026-01-09 06:36:51,572 | INFO     | PanDA job id: 6963162263
[2026-01-09 01:37:36] 2026-01-09 06:36:51,572 | INFO     | task id: 47898826
[2026-01-09 01:37:36] 2026-01-09 06:36:51,572 | INFO     | errors: (none)
[2026-01-09 01:37:36] 2026-01-09 06:36:51,572 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 01:37:36] 2026-01-09 06:36:51,573 | INFO     | pilot state: finished 
[2026-01-09 01:37:36] 2026-01-09 06:36:51,573 | INFO     | transexitcode: 0
[2026-01-09 01:37:36] 2026-01-09 06:36:51,573 | INFO     | exeerrorcode: 0
[2026-01-09 01:37:36] 2026-01-09 06:36:51,573 | INFO     | exeerrordiag: 
[2026-01-09 01:37:36] 2026-01-09 06:36:51,573 | INFO     | exitcode: 0
[2026-01-09 01:37:36] 2026-01-09 06:36:51,573 | INFO     | exitmsg: OK
[2026-01-09 01:37:36] 2026-01-09 06:36:51,574 | INFO     | cpuconsumptiontime: 65271 s
[2026-01-09 01:37:36] 2026-01-09 06:36:51,574 | INFO     | nevents: 400
[2026-01-09 01:37:36] 2026-01-09 06:36:51,574 | INFO     | neventsw: 0
[2026-01-09 01:37:36] 2026-01-09 06:36:51,574 | INFO     | pid: 26784
[2026-01-09 01:37:36] 2026-01-09 06:36:51,574 | INFO     | pgrp: 26784
[2026-01-09 01:37:36] 2026-01-09 06:36:51,574 | INFO     | corecount: 12
[2026-01-09 01:37:36] 2026-01-09 06:36:51,575 | INFO     | event service: False
[2026-01-09 01:37:36] 2026-01-09 06:36:51,575 | INFO     | sizes: {0: 2283142, 1: 2283998, 6: 2284260, 12: 2284288, 5889: 2310984, 5890: 2320165, 5891: 2320165, 5896: 2320359}
[2026-01-09 01:37:36] 2026-01-09 06:36:51,575 | INFO     | --------------------------------------------------
[2026-01-09 01:37:36] 2026-01-09 06:36:51,575 | INFO     | 
[2026-01-09 01:37:36] 2026-01-09 06:36:51,575 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-09 01:37:36] 2026-01-09 06:36:51,599 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 01:37:36] 2026-01-09 06:36:51,600 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 01:37:36] 2026-01-09 06:36:51,600 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 01:37:36] 2026-01-09 06:36:51,600 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 01:37:36] 2026-01-09 06:36:51,600 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 01:37:36] 2026-01-09 06:36:51,600 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 01:37:36] 2026-01-09 06:36:51,600 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 01:37:36] 2026-01-09 06:36:51,600 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 01:37:36] 2026-01-09 06:36:51,601 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 01:37:36] 2026-01-09 06:36:51,601 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 01:37:36] 2026-01-09 06:36:51,601 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 01:37:36] 2026-01-09 06:36:51,601 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 01:37:36] 2026-01-09 06:36:51,601 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 01:37:36] 2026-01-09 06:36:51,601 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 01:37:36] 2026-01-09 06:36:51,601 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 01:37:36] 2026-01-09 06:36:51,602 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 01:37:36] 2026-01-09 06:36:51,602 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 01:37:36] 2026-01-09 06:36:51,602 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 01:37:36] 2026-01-09 06:36:51,602 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 01:37:36] 2026-01-09 06:36:51,602 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 01:37:36] 2026-01-09 06:36:51,602 | INFO     | job 6963162263 has completed (purged errors)
[2026-01-09 01:37:36] 2026-01-09 06:36:51,603 | INFO     | overall cleanup function is called
[2026-01-09 01:37:36] 2026-01-09 06:36:52,610 | INFO     | --- collectZombieJob: --- 10, [26784]
[2026-01-09 01:37:36] 2026-01-09 06:36:52,611 | INFO     | zombie collector waiting for pid 26784
[2026-01-09 01:37:36] 2026-01-09 06:36:52,611 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 01:37:36] 2026-01-09 06:36:52,611 | INFO     | collected zombie processes
[2026-01-09 01:37:36] 2026-01-09 06:36:52,611 | INFO     | will attempt to kill all subprocesses of pid=26784
[2026-01-09 01:37:36] 2026-01-09 06:36:52,704 | INFO     | process IDs to be killed: [26784] (in reverse order)
[2026-01-09 01:37:36] 2026-01-09 06:36:52,757 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 01:37:36] 2026-01-09 06:36:52,757 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 01:37:36] 2026-01-09 06:36:52,760 | INFO     | did not find any defunct processes belonging to 26784
[2026-01-09 01:37:36] 2026-01-09 06:36:52,762 | INFO     | did not find any defunct processes belonging to 26784
[2026-01-09 01:37:36] 2026-01-09 06:36:52,762 | INFO     | ready for new job
[2026-01-09 01:37:36] 2026-01-09 06:36:52,763 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 01:37:36] 2026-01-09 06:36:52,764 | INFO     | ***************************************
[2026-01-09 01:37:36] 2026-01-09 06:36:52,764 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 01:37:36] 2026-01-09 06:36:52,764 | INFO     | ***************************************
[2026-01-09 01:37:36] 2026-01-09 06:36:52,764 | INFO     | 
[2026-01-09 01:37:36] 2026-01-09 06:36:52,765 | INFO     | architecture information:
[2026-01-09 01:37:36] 2026-01-09 06:36:52,765 | INFO     | executing command: cat /etc/os-release
[2026-01-09 01:37:36] 2026-01-09 06:36:52,778 | INFO     | cat /etc/os-release:
[2026-01-09 01:37:36] NAME="CentOS Linux"
[2026-01-09 01:37:36] VERSION="7 (Core)"
[2026-01-09 01:37:36] ID="centos"
[2026-01-09 01:37:36] ID_LIKE="rhel fedora"
[2026-01-09 01:37:36] VERSION_ID="7"
[2026-01-09 01:37:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 01:37:36] ANSI_COLOR="0;31"
[2026-01-09 01:37:36] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 01:37:36] HOME_URL="https://www.centos.org/"
[2026-01-09 01:37:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 01:37:36] 
[2026-01-09 01:37:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 01:37:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 01:37:36] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 01:37:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 01:37:36] 
[2026-01-09 01:37:36] 2026-01-09 06:36:52,779 | INFO     | ***************************************
[2026-01-09 01:37:36] 2026-01-09 06:36:53,282 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-09 01:37:36] 2026-01-09 06:36:53,298 | INFO     | sufficient remaining disk space (29431431168 B)
[2026-01-09 01:37:36] 2026-01-09 06:36:53,298 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 01:37:36] 2026-01-09 06:36:53,299 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 01:37:36] 2026-01-09 06:36:53,299 | INFO     | update_server=False
[2026-01-09 01:37:36] 2026-01-09 06:36:53,299 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 01:37:36] 2026-01-09 06:36:53,299 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 01:37:36] 2026-01-09 06:36:53,300 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 01:37:36] 2026-01-09 06:36:53,411 | INFO     | all job control threads have been joined
[2026-01-09 01:37:36] 2026-01-09 06:36:53,741 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 01:37:36] 2026-01-09 06:36:53,741 | INFO     | aborting loop
[2026-01-09 01:37:36] 2026-01-09 06:36:53,769 | INFO     | all data control threads have been joined
[2026-01-09 01:37:36] 2026-01-09 06:36:53,878 | INFO     | all payload control threads have been joined
[2026-01-09 01:37:36] 2026-01-09 06:36:54,303 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 01:37:36] 2026-01-09 06:36:54,305 | INFO     | [job] retrieve thread has finished
[2026-01-09 01:37:36] 2026-01-09 06:36:54,305 | INFO     | [job] queue monitor thread has finished
[2026-01-09 01:37:36] 2026-01-09 06:36:54,416 | INFO     | [job] control thread has finished
[2026-01-09 01:37:36] 2026-01-09 06:36:54,437 | INFO     | [payload] validate_post thread has finished
[2026-01-09 01:37:36] 2026-01-09 06:36:54,739 | INFO     | [data] copytool_in thread has finished
[2026-01-09 01:37:36] 2026-01-09 06:36:54,746 | INFO     | [job] job monitor thread has finished
[2026-01-09 01:37:36] 2026-01-09 06:36:54,775 | INFO     | [data] control thread has finished
[2026-01-09 01:37:36] 2026-01-09 06:36:54,882 | INFO     | [payload] control thread has finished
[2026-01-09 01:37:36] 2026-01-09 06:36:55,349 | INFO     | [job] validate thread has finished
[2026-01-09 01:37:36] 2026-01-09 06:36:55,362 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 01:37:36] 2026-01-09 06:36:55,453 | INFO     | [payload] failed_post thread has finished
[2026-01-09 01:37:36] 2026-01-09 06:36:55,516 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 01:37:36] 2026-01-09 06:36:55,602 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 01:37:36] 2026-01-09 06:36:55,604 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 01:37:36] 2026-01-09 06:36:56,308 | INFO     | [data] copytool_out thread has finished
[2026-01-09 01:37:36] 2026-01-09 06:36:57,305 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 01:37:36] 2026-01-09 06:37:23,025 | INFO     | PID=20331 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-09 01:37:36] 2026-01-09 06:37:23,025 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 01:37:36] 2026-01-09 06:37:23,026 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 01:37:36] 2026-01-09 06:37:23,026 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 01:37:36] 2026-01-09 06:37:29,375 | INFO     | [monitor] cgroup control has ended
[2026-01-09 01:37:36] 2026-01-09 06:37:31,345 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139703510296384)>', '<ExcThread(monitor, started 139702753531648)>']
[2026-01-09 01:37:36] 2026-01-09 06:37:32,066 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 01:37:36] 2026-01-09 06:37:32,066 | INFO     | [monitor] control thread has ended
[2026-01-09 01:37:36] 2026-01-09 06:37:36,370 | INFO     | all workflow threads have been joined
[2026-01-09 01:37:36] 2026-01-09 06:37:36,371 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 01:37:36] 2026-01-09 06:37:36,371 | INFO     | traces error code: 0
[2026-01-09 01:37:36] 2026-01-09 06:37:36,371 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 01:37:36] 2026-01-09 06:37:36,455 [wrapper] ==== pilot stdout END ====
[2026-01-09 01:37:36] 2026-01-09 06:37:36,459 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 01:37:36] 2026-01-09 06:37:36,463 [wrapper] pilotpid: 20331
[2026-01-09 01:37:36] 2026-01-09 06:37:36,467 [wrapper] Pilot exit status: 0
[2026-01-09 01:37:36] 2026-01-09 06:37:36,482 [wrapper] pandaids: 6963162263
[2026-01-09 01:37:36] 2026-01-09 06:37:36,522 [wrapper] cleanup supervisor_pilot  5447 20332
[2026-01-09 01:37:36] 2026-01-09 06:37:36,527 [wrapper] Test setup, not cleaning
[2026-01-09 01:37:36] 2026-01-09 06:37:36,531 [wrapper] apfmon messages muted
[2026-01-09 01:37:36] 2026-01-09 06:37:36,535 [wrapper] ==== wrapper stdout END ====
[2026-01-09 01:37:36] 2026-01-09 06:37:36,539 [wrapper] ==== wrapper stderr END ====
[2026-01-09 01:37:36]  *** Error codes and diagnostics ***
[2026-01-09 01:37:36]     "exeErrorCode": 0,
[2026-01-09 01:37:36]     "exeErrorDiag": "",
[2026-01-09 01:37:36]     "pilotErrorCode": 0,
[2026-01-09 01:37:36]     "pilotErrorDiag": "",
[2026-01-09 01:37:36]  *** Listing of results directory ***
[2026-01-09 01:37:36] total 442324
[2026-01-09 01:37:36] -rw-r--r-- 1 boincer umatlas    579449 Jan  8 16:44 pilot3.tar.gz
[2026-01-09 01:37:36] -rwx------ 1 boincer umatlas     36322 Jan  8 16:49 runpilot2-wrapper.sh
[2026-01-09 01:37:36] -rw-r--r-- 1 boincer umatlas      5112 Jan  8 16:51 queuedata.json
[2026-01-09 01:37:36] -rw-r--r-- 1 boincer umatlas       100 Jan  8 23:58 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 01:37:36] -rwxr-xr-x 1 boincer umatlas      7986 Jan  8 23:58 run_atlas
[2026-01-09 01:37:36] -rw-r--r-- 1 boincer umatlas       105 Jan  8 23:58 job.xml
[2026-01-09 01:37:36] -rw-r--r-- 2 boincer umatlas 225621424 Jan  8 23:58 EVNT.47898824._001291.pool.root.1
[2026-01-09 01:37:36] -rw-r--r-- 2 boincer umatlas     15847 Jan  8 23:58 start_atlas.sh
[2026-01-09 01:37:36] drwxrwx--x 2 boincer umatlas      4096 Jan  8 23:58 shared
[2026-01-09 01:37:36] -rw-r--r-- 2 boincer umatlas    592398 Jan  8 23:58 input.tar.gz
[2026-01-09 01:37:36] -rw-r--r-- 1 boincer umatlas         0 Jan  8 23:58 boinc_lockfile
[2026-01-09 01:37:36] -rw-r--r-- 1 boincer umatlas      2519 Jan  8 23:58 pandaJob.out
[2026-01-09 01:37:36] -rw------- 1 boincer umatlas        57 Jan  8 23:58 setup.sh.local
[2026-01-09 01:37:36] -rw------- 1 boincer umatlas    989771 Jan  8 23:58 agis_schedconf.cvmfs.json
[2026-01-09 01:37:36] -rw------- 1 boincer umatlas   1516240 Jan  8 23:58 agis_ddmendpoints.agis.ALL.json
[2026-01-09 01:37:36] drwx------ 5 boincer umatlas      4096 Jan  8 23:58 pilot3
[2026-01-09 01:37:36] -rw-r--r-- 1 boincer umatlas      5952 Jan  9 01:28 init_data.xml
[2026-01-09 01:37:36] -rw------- 1 boincer umatlas 220915462 Jan  9 01:36 HITS.47898826._033884.pool.root.1
[2026-01-09 01:37:36] -rw-r--r-- 1 boincer umatlas       529 Jan  9 01:36 boinc_task_state.xml
[2026-01-09 01:37:36] -rw------- 1 boincer umatlas        95 Jan  9 01:36 pilot_heartbeat.json
[2026-01-09 01:37:36] -rw------- 1 boincer umatlas      1047 Jan  9 01:36 memory_monitor_summary.json
[2026-01-09 01:37:36] -rw------- 1 boincer umatlas    401838 Jan  9 01:36 log.47898826._033884.job.log.tgz.1
[2026-01-09 01:37:36] -rw------- 1 boincer umatlas      7846 Jan  9 01:36 heartbeat.json
[2026-01-09 01:37:36] -rw-r--r-- 1 boincer umatlas        27 Jan  9 01:37 wrapper_checkpoint.txt
[2026-01-09 01:37:36] -rw-r--r-- 1 boincer umatlas      8192 Jan  9 01:37 boinc_mmap_file
[2026-01-09 01:37:36] -rw------- 1 boincer umatlas      4746 Jan  9 01:37 pilotlog.txt
[2026-01-09 01:37:36] -rw------- 1 boincer umatlas    840326 Jan  9 01:37 log.47898826._033884.job.log.1
[2026-01-09 01:37:36] -rw------- 1 boincer umatlas       357 Jan  9 01:37 output.list
[2026-01-09 01:37:36] -rw-r--r-- 1 boincer umatlas       620 Jan  9 01:37 runtime_log
[2026-01-09 01:37:36] -rw------- 1 boincer umatlas   1259520 Jan  9 01:37 result.tar.gz
[2026-01-09 01:37:36] -rw------- 1 boincer umatlas       659 Jan  9 01:37 VwQMDmz3Cy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmXSgKDmjslDem.diag
[2026-01-09 01:37:36] -rw-r--r-- 1 boincer umatlas      9339 Jan  9 01:37 runtime_log.err
[2026-01-09 01:37:36] -rw-r--r-- 1 boincer umatlas     21620 Jan  9 01:37 stderr.txt
[2026-01-09 01:37:36] HITS file was successfully produced:
[2026-01-09 01:37:36] -rw------- 1 boincer umatlas 220915462 Jan  9 01:36 shared/HITS.pool.root.1
[2026-01-09 01:37:36]  *** Contents of shared directory: ***
[2026-01-09 01:37:36] total 437908
[2026-01-09 01:37:36] -rw-r--r-- 2 boincer umatlas 225621424 Jan  8 23:58 ATLAS.root_0
[2026-01-09 01:37:36] -rw-r--r-- 2 boincer umatlas     15847 Jan  8 23:58 start_atlas.sh
[2026-01-09 01:37:36] -rw-r--r-- 2 boincer umatlas    592398 Jan  8 23:58 input.tar.gz
[2026-01-09 01:37:36] -rw------- 1 boincer umatlas 220915462 Jan  9 01:36 HITS.pool.root.1
[2026-01-09 01:37:36] -rw------- 1 boincer umatlas   1259520 Jan  9 01:37 result.tar.gz
01:37:38 (16649): run_atlas exited; CPU time 65241.833675
01:37:38 (16649): called boinc_finish(0)

</stderr_txt>
]]>

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