Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:00:43 (3072974): wrapper (7.7.26015): starting
00:00:43 (3072974): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 00:00:43] Arguments: --nthreads 8
[2026-01-09 00:00:43] Threads: 8
[2026-01-09 00:00:43] Checking for CVMFS
[2026-01-09 00:00:44] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 00:00:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 00:00:44] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 00:00:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 00:00:45] 2.13.3.0 8866 21839 161508 154931 0 24 36899264 39288833 7783 16776704 0 7694480 99.691 7676418 18140 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-09 00:00:45] CVMFS is ok
[2026-01-09 00:00:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 00:00:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 00:00:45] Further information can be found at the LHC@home message board.
[2026-01-09 00:00:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 00:00:45] Checking for apptainer binary...
[2026-01-09 00:00:45] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 00:00:45] Running /usr/bin/apptainer --version
[2026-01-09 00:00:45] apptainer version 1.4.5-2.el9
[2026-01-09 00:00:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 00:00:46] c-211-30.aglt2.org
[2026-01-09 00:00:46] apptainer works
[2026-01-09 00:00:46] Set ATHENA_PROC_NUMBER=8
[2026-01-09 00:00:46] Set ATHENA_CORE_NUMBER=8
[2026-01-09 00:00:46] Starting ATLAS job with PandaID=6963162350
[2026-01-09 00:00:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 00:17:51]  *** The last 200 lines of the pilot log: ***
[2026-01-10 00:17:51] 2026-01-10 05:17:07,413 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 00:17:51] 2026-01-10 05:17:09,262 | INFO     | time since job start (87224s) is within the limit (349056.0s)
[2026-01-10 00:17:51] 2026-01-10 05:17:09,918 | INFO     | monitor loop #4399: job 0:6963162350 is in state 'finished'
[2026-01-10 00:17:51] 2026-01-10 05:17:09,942 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 00:17:51] 2026-01-10 05:17:11,485 | INFO     | PID=3080595 has CPU usage=6.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 00:17:51] 2026-01-10 05:17:11,485 | INFO     | .. there are 6 such processes running
[2026-01-10 00:17:51] 2026-01-10 05:17:12,453 | INFO     | monitor loop #4400: job 0:6963162350 is in state 'finished'
[2026-01-10 00:17:51] 2026-01-10 05:17:12,454 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 00:17:51] 2026-01-10 05:17:12,486 | INFO     | time since job start (87227s) is within the limit (349056.0s)
[2026-01-10 00:17:51] 2026-01-10 05:17:14,493 | INFO     | time since job start (87229s) is within the limit (349056.0s)
[2026-01-10 00:17:51] 2026-01-10 05:17:14,958 | INFO     | monitor loop #4401: job 0:6963162350 is in state 'finished'
[2026-01-10 00:17:51] 2026-01-10 05:17:14,982 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 00:17:51] 2026-01-10 05:17:16,500 | INFO     | time since job start (87231s) is within the limit (349056.0s)
[2026-01-10 00:17:51] 2026-01-10 05:17:17,480 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-10 00:17:51] 2026-01-10 05:17:17,490 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2900.00565
[2026-01-10 00:17:51] 2026-01-10 05:17:17,490 | INFO     | monitor loop #4402: job 0:6963162350 is in state 'finished'
[2026-01-10 00:17:51] 2026-01-10 05:17:17,491 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 00:17:51] 2026-01-10 05:17:17,503 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6963162350/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 00:17:51] 2026-01-10 05:17:17,505 | INFO     | extracted standard info from prmon json
[2026-01-10 00:17:51] 2026-01-10 05:17:17,505 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 00:17:51] 2026-01-10 05:17:17,505 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 00:17:51] 2026-01-10 05:17:17,506 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-10 00:17:51] 2026-01-10 05:17:17,506 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-10 00:17:51] 2026-01-10 05:17:17,547 | INFO     | fitting pss+swap vs Time
[2026-01-10 00:17:51] 2026-01-10 05:17:17,550 | INFO     | sum of square deviations: 899139512753.9498
[2026-01-10 00:17:51] 2026-01-10 05:17:17,609 | INFO     | sum of deviations: 4619100447342.515
[2026-01-10 00:17:51] 2026-01-10 05:17:17,609 | INFO     | mean x: 1767978722.5196354
[2026-01-10 00:17:51] 2026-01-10 05:17:17,609 | INFO     | mean y: 2444118.1248246846
[2026-01-10 00:17:51] 2026-01-10 05:17:17,610 | INFO     | intersect: -9080096680.32105
[2026-01-10 00:17:51] 2026-01-10 05:17:17,611 | INFO     | chi2: 17.928062379138904
[2026-01-10 00:17:51] 2026-01-10 05:17:17,614 | INFO     | sum of square deviations: 889714877176.2343
[2026-01-10 00:17:51] 2026-01-10 05:17:17,703 | INFO     | sum of deviations: 4686580773654.246
[2026-01-10 00:17:51] 2026-01-10 05:17:17,704 | INFO     | mean x: 1767978570.0232232
[2026-01-10 00:17:51] 2026-01-10 05:17:17,704 | INFO     | mean y: 2445205.7804363123
[2026-01-10 00:17:51] 2026-01-10 05:17:17,704 | INFO     | intersect: -9310397129.508877
[2026-01-10 00:17:51] 2026-01-10 05:17:17,706 | INFO     | chi2: 17.25000732047994
[2026-01-10 00:17:51] 2026-01-10 05:17:17,706 | INFO     | current chi2=17.25000732047994 (change=3.7820877924206 %)
[2026-01-10 00:17:51] 2026-01-10 05:17:17,707 | INFO     | right removable region: 1420
[2026-01-10 00:17:51] 2026-01-10 05:17:17,709 | INFO     | sum of square deviations: 889713990236.234
[2026-01-10 00:17:51] 2026-01-10 05:17:17,845 | INFO     | sum of deviations: 4129358341253.951
[2026-01-10 00:17:51] 2026-01-10 05:17:17,845 | INFO     | mean x: 1767978875.0232232
[2026-01-10 00:17:51] 2026-01-10 05:17:17,845 | INFO     | mean y: 2452041.0014074594
[2026-01-10 00:17:51] 2026-01-10 05:17:17,845 | INFO     | intersect: -8203126824.628756
[2026-01-10 00:17:51] 2026-01-10 05:17:17,850 | INFO     | chi2: 13.451592313413242
[2026-01-10 00:17:51] 2026-01-10 05:17:17,850 | INFO     | current chi2=13.451592313413242 (change=24.969067883958747 %)
[2026-01-10 00:17:51] 2026-01-10 05:17:17,850 | INFO     | left removable region: 10
[2026-01-10 00:17:51] 2026-01-10 05:17:17,852 | INFO     | sum of square deviations: 869211316309.3073
[2026-01-10 00:17:51] 2026-01-10 05:17:17,925 | INFO     | sum of deviations: 3785950474482.0845
[2026-01-10 00:17:51] 2026-01-10 05:17:17,926 | INFO     | mean x: 1767978844.529078
[2026-01-10 00:17:51] 2026-01-10 05:17:17,926 | INFO     | mean y: 2459779.9368794328
[2026-01-10 00:17:51] 2026-01-10 05:17:17,926 | INFO     | intersect: -7698176670.287714
[2026-01-10 00:17:51] 2026-01-10 05:17:17,928 | INFO     | chi2: 9.775623690801094
[2026-01-10 00:17:51] 2026-01-10 05:17:17,928 | INFO     | current memory leak: 4.36 B/s (using 1410 data points, chi2=9.78)
[2026-01-10 00:17:51] 2026-01-10 05:17:17,930 | INFO     | could have reported an average CPU frequency of 2900 MHz (51 samples)
[2026-01-10 00:17:51] 2026-01-10 05:17:17,930 | INFO     | ..............................
[2026-01-10 00:17:51] 2026-01-10 05:17:17,930 | INFO     | . Timing measurements:
[2026-01-10 00:17:51] 2026-01-10 05:17:17,931 | INFO     | . get job = 1 s
[2026-01-10 00:17:51] 2026-01-10 05:17:17,931 | INFO     | . initial setup = 17 s
[2026-01-10 00:17:51] 2026-01-10 05:17:17,931 | INFO     | . payload setup = 72 s
[2026-01-10 00:17:51] 2026-01-10 05:17:17,931 | INFO     | . stage-in = 3 s
[2026-01-10 00:17:51] 2026-01-10 05:17:17,931 | INFO     | . payload execution = 86993 s
[2026-01-10 00:17:51] 2026-01-10 05:17:17,931 | INFO     | . stage-out = 3 s
[2026-01-10 00:17:51] 2026-01-10 05:17:17,932 | INFO     | . log creation = 0 s
[2026-01-10 00:17:51] 2026-01-10 05:17:17,932 | INFO     | ..............................
[2026-01-10 00:17:51] 2026-01-10 05:17:18,086 | INFO     | 
[2026-01-10 00:17:51] 2026-01-10 05:17:18,087 | INFO     | job summary report
[2026-01-10 00:17:51] 2026-01-10 05:17:18,087 | INFO     | --------------------------------------------------
[2026-01-10 00:17:51] 2026-01-10 05:17:18,087 | INFO     | PanDA job id: 6963162350
[2026-01-10 00:17:51] 2026-01-10 05:17:18,087 | INFO     | task id: 47898826
[2026-01-10 00:17:51] 2026-01-10 05:17:18,087 | INFO     | errors: (none)
[2026-01-10 00:17:51] 2026-01-10 05:17:18,088 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 00:17:51] 2026-01-10 05:17:18,088 | INFO     | pilot state: finished 
[2026-01-10 00:17:51] 2026-01-10 05:17:18,088 | INFO     | transexitcode: 0
[2026-01-10 00:17:51] 2026-01-10 05:17:18,088 | INFO     | exeerrorcode: 0
[2026-01-10 00:17:51] 2026-01-10 05:17:18,088 | INFO     | exeerrordiag: 
[2026-01-10 00:17:51] 2026-01-10 05:17:18,088 | INFO     | exitcode: 0
[2026-01-10 00:17:51] 2026-01-10 05:17:18,089 | INFO     | exitmsg: OK
[2026-01-10 00:17:51] 2026-01-10 05:17:18,089 | INFO     | cpuconsumptiontime: 107033 s
[2026-01-10 00:17:51] 2026-01-10 05:17:18,089 | INFO     | nevents: 400
[2026-01-10 00:17:51] 2026-01-10 05:17:18,089 | INFO     | neventsw: 0
[2026-01-10 00:17:51] 2026-01-10 05:17:18,089 | INFO     | pid: 3101063
[2026-01-10 00:17:51] 2026-01-10 05:17:18,089 | INFO     | pgrp: 3101063
[2026-01-10 00:17:51] 2026-01-10 05:17:18,090 | INFO     | corecount: 8
[2026-01-10 00:17:51] 2026-01-10 05:17:18,090 | INFO     | event service: False
[2026-01-10 00:17:51] 2026-01-10 05:17:18,090 | INFO     | sizes: {0: 2283743, 1: 2283799, 5: 2283827, 6: 2283827, 8: 2284054, 11: 2284082, 13: 2284238, 25: 2284294, 37: 2284322, 49: 2284350, 64: 2284350, 66: 2284948, 79: 
[2026-01-10 00:17:51] 2026-01-10 05:17:18,090 | INFO     | --------------------------------------------------
[2026-01-10 00:17:51] 2026-01-10 05:17:18,090 | INFO     | 
[2026-01-10 00:17:51] 2026-01-10 05:17:18,091 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2026-01-10 00:17:51] 2026-01-10 05:17:18,118 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 00:17:51] 2026-01-10 05:17:18,119 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 00:17:51] 2026-01-10 05:17:18,119 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 00:17:51] 2026-01-10 05:17:18,119 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 00:17:51] 2026-01-10 05:17:18,119 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 00:17:51] 2026-01-10 05:17:18,119 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 00:17:51] 2026-01-10 05:17:18,119 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 00:17:51] 2026-01-10 05:17:18,119 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 00:17:51] 2026-01-10 05:17:18,120 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 00:17:51] 2026-01-10 05:17:18,120 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 00:17:51] 2026-01-10 05:17:18,120 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 00:17:51] 2026-01-10 05:17:18,120 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 00:17:51] 2026-01-10 05:17:18,120 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 00:17:51] 2026-01-10 05:17:18,120 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 00:17:51] 2026-01-10 05:17:18,120 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 00:17:51] 2026-01-10 05:17:18,121 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 00:17:51] 2026-01-10 05:17:18,121 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 00:17:51] 2026-01-10 05:17:18,121 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 00:17:51] 2026-01-10 05:17:18,121 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 00:17:51] 2026-01-10 05:17:18,121 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 00:17:51] 2026-01-10 05:17:18,122 | INFO     | job 6963162350 has completed (purged errors)
[2026-01-10 00:17:51] 2026-01-10 05:17:18,122 | INFO     | overall cleanup function is called
[2026-01-10 00:17:51] 2026-01-10 05:17:19,134 | INFO     | --- collectZombieJob: --- 10, [3101063]
[2026-01-10 00:17:51] 2026-01-10 05:17:19,135 | INFO     | zombie collector waiting for pid 3101063
[2026-01-10 00:17:51] 2026-01-10 05:17:19,135 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 00:17:51] 2026-01-10 05:17:19,135 | INFO     | collected zombie processes
[2026-01-10 00:17:51] 2026-01-10 05:17:19,135 | INFO     | will attempt to kill all subprocesses of pid=3101063
[2026-01-10 00:17:51] 2026-01-10 05:17:19,549 | INFO     | process IDs to be killed: [3101063] (in reverse order)
[2026-01-10 00:17:51] 2026-01-10 05:17:19,774 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 00:17:51] 2026-01-10 05:17:19,774 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 00:17:51] 2026-01-10 05:17:19,799 | INFO     | did not find any defunct processes belonging to 3101063
[2026-01-10 00:17:51] 2026-01-10 05:17:19,822 | INFO     | did not find any defunct processes belonging to 3101063
[2026-01-10 00:17:51] 2026-01-10 05:17:19,823 | INFO     | ready for new job
[2026-01-10 00:17:51] 2026-01-10 05:17:19,824 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 00:17:51] 2026-01-10 05:17:19,830 | INFO     | ***************************************
[2026-01-10 00:17:51] 2026-01-10 05:17:19,831 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 00:17:51] 2026-01-10 05:17:19,831 | INFO     | ***************************************
[2026-01-10 00:17:51] 2026-01-10 05:17:19,831 | INFO     | 
[2026-01-10 00:17:51] 2026-01-10 05:17:19,833 | INFO     | architecture information:
[2026-01-10 00:17:51] 2026-01-10 05:17:19,833 | INFO     | executing command: cat /etc/os-release
[2026-01-10 00:17:51] 2026-01-10 05:17:19,876 | INFO     | cat /etc/os-release:
[2026-01-10 00:17:51] NAME="CentOS Linux"
[2026-01-10 00:17:51] VERSION="7 (Core)"
[2026-01-10 00:17:51] ID="centos"
[2026-01-10 00:17:51] ID_LIKE="rhel fedora"
[2026-01-10 00:17:51] VERSION_ID="7"
[2026-01-10 00:17:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 00:17:51] ANSI_COLOR="0;31"
[2026-01-10 00:17:51] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 00:17:51] HOME_URL="https://www.centos.org/"
[2026-01-10 00:17:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 00:17:51] 
[2026-01-10 00:17:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 00:17:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 00:17:51] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 00:17:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 00:17:51] 
[2026-01-10 00:17:51] 2026-01-10 05:17:19,876 | INFO     | ***************************************
[2026-01-10 00:17:51] 2026-01-10 05:17:20,380 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2026-01-10 00:17:51] 2026-01-10 05:17:20,459 | INFO     | sufficient remaining disk space (53765734400 B)
[2026-01-10 00:17:51] 2026-01-10 05:17:20,459 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 00:17:51] 2026-01-10 05:17:20,459 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 00:17:51] 2026-01-10 05:17:20,460 | INFO     | update_server=False
[2026-01-10 00:17:51] 2026-01-10 05:17:20,460 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 00:17:51] 2026-01-10 05:17:20,783 | INFO     | all data control threads have been joined
[2026-01-10 00:17:51] 2026-01-10 05:17:21,007 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 00:17:51] 2026-01-10 05:17:21,008 | INFO     | aborting loop
[2026-01-10 00:17:51] 2026-01-10 05:17:21,158 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 00:17:51] 2026-01-10 05:17:21,403 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 00:17:51] 2026-01-10 05:17:21,466 | INFO     | [job] retrieve thread has finished
[2026-01-10 00:17:51] 2026-01-10 05:17:21,702 | INFO     | all job control threads have been joined
[2026-01-10 00:17:51] 2026-01-10 05:17:21,786 | INFO     | [payload] validate_post thread has finished
[2026-01-10 00:17:51] 2026-01-10 05:17:21,790 | INFO     | [data] control thread has finished
[2026-01-10 00:17:51] 2026-01-10 05:17:21,945 | INFO     | all payload control threads have been joined
[2026-01-10 00:17:51] 2026-01-10 05:17:21,964 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 00:17:51] 2026-01-10 05:17:22,014 | INFO     | [job] job monitor thread has finished
[2026-01-10 00:17:51] 2026-01-10 05:17:22,349 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 00:17:51] 2026-01-10 05:17:22,397 | INFO     | [data] copytool_in thread has finished
[2026-01-10 00:17:51] 2026-01-10 05:17:22,457 | INFO     | [job] validate thread has finished
[2026-01-10 00:17:51] 2026-01-10 05:17:22,708 | INFO     | [job] control thread has finished
[2026-01-10 00:17:51] 2026-01-10 05:17:22,883 | INFO     | [payload] failed_post thread has finished
[2026-01-10 00:17:51] 2026-01-10 05:17:22,915 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 00:17:51] 2026-01-10 05:17:22,951 | INFO     | [payload] control thread has finished
[2026-01-10 00:17:51] 2026-01-10 05:17:23,101 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 00:17:51] 2026-01-10 05:17:23,168 | INFO     | [data] copytool_out thread has finished
[2026-01-10 00:17:51] 2026-01-10 05:17:24,107 | INFO     | [job] queue monitor thread has finished
[2026-01-10 00:17:51] 2026-01-10 05:17:25,413 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 00:17:51] 2026-01-10 05:17:27,761 | INFO     | [monitor] cgroup control has ended
[2026-01-10 00:17:51] 2026-01-10 05:17:31,094 | INFO     | job.realtimelogging is not enabled
[2026-01-10 00:17:51] 2026-01-10 05:17:32,158 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 00:17:51] 2026-01-10 05:17:32,672 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139667524142912)>', '<ExcThread(monitor, started 139667135510272)>']
[2026-01-10 00:17:51] 2026-01-10 05:17:37,699 | INFO     | all workflow threads have been joined
[2026-01-10 00:17:51] 2026-01-10 05:17:37,700 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 00:17:51] 2026-01-10 05:17:37,700 | INFO     | traces error code: 0
[2026-01-10 00:17:51] 2026-01-10 05:17:37,700 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 00:17:51] 2026-01-10 05:17:50,231 | INFO     | PID=3080595 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 00:17:51] 2026-01-10 05:17:50,232 | INFO     | .. there are 6 such processes running
[2026-01-10 00:17:51] 2026-01-10 05:17:50,233 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 00:17:51] 2026-01-10 05:17:50,233 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 00:17:51] 2026-01-10 05:17:50,233 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 00:17:51] 2026-01-10 05:17:50,234 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 00:17:51] 2026-01-10 05:17:50,234 | INFO     | [monitor] control thread has ended
[2026-01-10 00:17:51] 2026-01-10 05:17:50,594 [wrapper] ==== pilot stdout END ====
[2026-01-10 00:17:51] 2026-01-10 05:17:50,635 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 00:17:51] 2026-01-10 05:17:50,667 [wrapper] pilotpid: 3080595
[2026-01-10 00:17:51] 2026-01-10 05:17:50,671 [wrapper] Pilot exit status: 0
[2026-01-10 00:17:51] 2026-01-10 05:17:50,684 [wrapper] pandaids: 6963162350
[2026-01-10 00:17:51] 2026-01-10 05:17:50,779 [wrapper] cleanup supervisor_pilot 1055701 3080596
[2026-01-10 00:17:51] 2026-01-10 05:17:50,807 [wrapper] Test setup, not cleaning
[2026-01-10 00:17:51] 2026-01-10 05:17:50,844 [wrapper] apfmon messages muted
[2026-01-10 00:17:51] 2026-01-10 05:17:50,867 [wrapper] ==== wrapper stdout END ====
[2026-01-10 00:17:51] 2026-01-10 05:17:50,910 [wrapper] ==== wrapper stderr END ====
[2026-01-10 00:17:51]  *** Error codes and diagnostics ***
[2026-01-10 00:17:51]     "exeErrorCode": 0,
[2026-01-10 00:17:51]     "exeErrorDiag": "",
[2026-01-10 00:17:51]     "pilotErrorCode": 0,
[2026-01-10 00:17:51]     "pilotErrorDiag": "",
[2026-01-10 00:17:51]  *** Listing of results directory ***
[2026-01-10 00:17:51] total 463344
[2026-01-10 00:17:51] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 16:44 pilot3.tar.gz
[2026-01-10 00:17:51] -rwx------. 1 boincer umatlas     36322 Jan  8 16:49 runpilot2-wrapper.sh
[2026-01-10 00:17:51] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 16:51 queuedata.json
[2026-01-10 00:17:51] -rw-r--r--. 1 boincer umatlas       100 Jan  9 00:00 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 00:17:51] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 00:00 run_atlas
[2026-01-10 00:17:51] -rw-r--r--. 1 boincer umatlas       105 Jan  9 00:00 job.xml
[2026-01-10 00:17:51] -rw-r--r--. 2 boincer umatlas 227299395 Jan  9 00:00 EVNT.47898824._001294.pool.root.1
[2026-01-10 00:17:51] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 00:00 start_atlas.sh
[2026-01-10 00:17:51] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 00:00 shared
[2026-01-10 00:17:51] -rw-r--r--. 2 boincer umatlas    592401 Jan  9 00:00 input.tar.gz
[2026-01-10 00:17:51] -rw-r--r--. 1 boincer umatlas         0 Jan  9 00:00 boinc_lockfile
[2026-01-10 00:17:51] -rw-r--r--. 1 boincer umatlas      2519 Jan  9 00:00 pandaJob.out
[2026-01-10 00:17:51] -rw-------. 1 boincer umatlas        57 Jan  9 00:00 setup.sh.local
[2026-01-10 00:17:51] -rw-------. 1 boincer umatlas    989771 Jan  9 00:03 agis_schedconf.cvmfs.json
[2026-01-10 00:17:51] drwx------. 5 boincer umatlas      4096 Jan  9 00:03 pilot3
[2026-01-10 00:17:51] -rw-r--r--. 1 boincer umatlas      6524 Jan 10 00:09 init_data.xml
[2026-01-10 00:17:51] -rw-------. 1 boincer umatlas 221250008 Jan 10 00:15 HITS.47898826._033971.pool.root.1
[2026-01-10 00:17:51] -rw-r--r--. 1 boincer umatlas       532 Jan 10 00:16 boinc_task_state.xml
[2026-01-10 00:17:51] -rw-------. 1 boincer umatlas      1040 Jan 10 00:16 memory_monitor_summary.json
[2026-01-10 00:17:51] -rw-------. 1 boincer umatlas   1516240 Jan 10 00:16 agis_ddmendpoints.agis.ALL.json
[2026-01-10 00:17:51] -rw-------. 1 boincer umatlas   1304414 Jan 10 00:16 log.47898826._033971.job.log.tgz.1
[2026-01-10 00:17:51] -rw-------. 1 boincer umatlas      7824 Jan 10 00:17 heartbeat.json
[2026-01-10 00:17:51] -rw-r--r--. 1 boincer umatlas        29 Jan 10 00:17 wrapper_checkpoint.txt
[2026-01-10 00:17:51] -rw-r--r--. 1 boincer umatlas      8192 Jan 10 00:17 boinc_mmap_file
[2026-01-10 00:17:51] -rw-------. 1 boincer umatlas        95 Jan 10 00:17 pilot_heartbeat.json
[2026-01-10 00:17:51] -rw-------. 1 boincer umatlas       822 Jan 10 00:17 pilotlog.txt
[2026-01-10 00:17:51] -rw-------. 1 boincer umatlas   9696773 Jan 10 00:17 log.47898826._033971.job.log.1
[2026-01-10 00:17:51] -rw-------. 1 boincer umatlas       357 Jan 10 00:17 output.list
[2026-01-10 00:17:51] -rw-r--r--. 1 boincer umatlas       620 Jan 10 00:17 runtime_log
[2026-01-10 00:17:51] -rw-------. 1 boincer umatlas  11018240 Jan 10 00:17 result.tar.gz
[2026-01-10 00:17:51] -rw-r--r--. 1 boincer umatlas      9343 Jan 10 00:17 runtime_log.err
[2026-01-10 00:17:51] -rw-------. 1 boincer umatlas       659 Jan 10 00:17 oo0LDmz3Cy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmuflKDmJBqsgn.diag
[2026-01-10 00:17:51] -rw-r--r--. 1 boincer umatlas     21708 Jan 10 00:17 stderr.txt
[2026-01-10 00:17:51] HITS file was successfully produced:
[2026-01-10 00:17:51] -rw-------. 1 boincer umatlas 221250008 Jan 10 00:15 shared/HITS.pool.root.1
[2026-01-10 00:17:51]  *** Contents of shared directory: ***
[2026-01-10 00:17:51] total 449404
[2026-01-10 00:17:51] -rw-r--r--. 2 boincer umatlas 227299395 Jan  9 00:00 ATLAS.root_0
[2026-01-10 00:17:51] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 00:00 start_atlas.sh
[2026-01-10 00:17:51] -rw-r--r--. 2 boincer umatlas    592401 Jan  9 00:00 input.tar.gz
[2026-01-10 00:17:51] -rw-------. 1 boincer umatlas 221250008 Jan 10 00:15 HITS.pool.root.1
[2026-01-10 00:17:51] -rw-------. 1 boincer umatlas  11018240 Jan 10 00:17 result.tar.gz
00:17:53 (3072974): run_atlas exited; CPU time 110028.195054
00:17:53 (3072974): called boinc_finish(0)

</stderr_txt>
]]>

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