Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:27:33 (9472): wrapper (7.7.26015): starting
08:27:33 (9472): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 08:27:33] Arguments: --nthreads 8
[2026-01-09 08:27:33] Threads: 8
[2026-01-09 08:27:33] Checking for CVMFS
[2026-01-09 08:27:34] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 08:27:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 08:27:34] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 08:27:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 08:27:34] 2.11.2.0 9669 35115 98412 154936 1 56 15757852 25165824 0 130560 0 14632005 99.848 7359140 3490 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-09 08:27:34] CVMFS is ok
[2026-01-09 08:27:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 08:27:34] Checking for apptainer binary...
[2026-01-09 08:27:34] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 08:27:34] Running /usr/bin/apptainer --version
[2026-01-09 08:27:34] apptainer version 1.3.2-1.el7
[2026-01-09 08:27:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 08:27:35] cg-vwn394.simple-grid.lan
[2026-01-09 08:27:35] apptainer works
[2026-01-09 08:27:35] Set ATHENA_PROC_NUMBER=8
[2026-01-09 08:27:35] Set ATHENA_CORE_NUMBER=8
[2026-01-09 08:27:35] Starting ATLAS job with PandaID=6963162311
[2026-01-09 08:27:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/10 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 11:05:10]  *** The last 200 lines of the pilot log: ***
[2026-01-09 11:05:10] 2026-01-09 10:04:21,630 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 11:05:10] 2026-01-09 10:04:22,106 | INFO     | time since job start (9393s) is within the limit (349056.0s)
[2026-01-09 11:05:10] 2026-01-09 10:04:22,413 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 11:05:10] 2026-01-09 10:04:22,415 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2026-01-09 11:05:10] 2026-01-09 10:04:22,416 | INFO     | using path: /var/lib/boinc/slots/10/PanDA_Pilot-6963162311/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 11:05:10] 2026-01-09 10:04:22,417 | INFO     | extracted standard info from prmon json
[2026-01-09 11:05:10] 2026-01-09 10:04:22,417 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 11:05:10] 2026-01-09 10:04:22,417 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 11:05:10] 2026-01-09 10:04:22,418 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 11:05:10] 2026-01-09 10:04:22,418 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 11:05:10] 2026-01-09 10:04:22,421 | INFO     | fitting pss+swap vs Time
[2026-01-09 11:05:10] 2026-01-09 10:04:22,422 | INFO     | sum of square deviations: 1132458442.5
[2026-01-09 11:05:10] 2026-01-09 10:04:22,423 | INFO     | sum of deviations: -19256850849.5
[2026-01-09 11:05:10] 2026-01-09 10:04:22,423 | INFO     | mean x: 1767948365.5
[2026-01-09 11:05:10] 2026-01-09 10:04:22,423 | INFO     | mean y: 2524155.8636363638
[2026-01-09 11:05:10] 2026-01-09 10:04:22,423 | INFO     | intersect: 30065541663.943905
[2026-01-09 11:05:10] 2026-01-09 10:04:22,424 | INFO     | chi2: 2.4476024382970447
[2026-01-09 11:05:10] 2026-01-09 10:04:22,424 | INFO     | sum of square deviations: 1025693650.0
[2026-01-09 11:05:10] 2026-01-09 10:04:22,425 | INFO     | sum of deviations: -8178410605.000002
[2026-01-09 11:05:10] 2026-01-09 10:04:22,425 | INFO     | mean x: 1767948213.0
[2026-01-09 11:05:10] 2026-01-09 10:04:22,425 | INFO     | mean y: 2539599.7852348993
[2026-01-09 11:05:10] 2026-01-09 10:04:22,425 | INFO     | intersect: 14099347564.122347
[2026-01-09 11:05:10] 2026-01-09 10:04:22,426 | INFO     | chi2: 1.6871505969384342
[2026-01-09 11:05:10] 2026-01-09 10:04:22,426 | INFO     | current chi2=1.6871505969384342 (change=31.069254935360586 %)
[2026-01-09 11:05:10] 2026-01-09 10:04:22,426 | INFO     | sum of square deviations: 925859220.0
[2026-01-09 11:05:10] 2026-01-09 10:04:22,427 | INFO     | sum of deviations: -7425840123.999994
[2026-01-09 11:05:10] 2026-01-09 10:04:22,427 | INFO     | mean x: 1767948060.5
[2026-01-09 11:05:10] 2026-01-09 10:04:22,427 | INFO     | mean y: 2540749.7916666665
[2026-01-09 11:05:10] 2026-01-09 10:04:22,428 | INFO     | intersect: 14182341913.092573
[2026-01-09 11:05:10] 2026-01-09 10:04:22,428 | INFO     | chi2: 1.686981950839583
[2026-01-09 11:05:10] 2026-01-09 10:04:22,428 | INFO     | current chi2=1.686981950839583 (change=0.009995912585236107 %)
[2026-01-09 11:05:10] 2026-01-09 10:04:22,428 | INFO     | right removable region: 143
[2026-01-09 11:05:10] 2026-01-09 10:04:22,428 | INFO     | sum of square deviations: 1025693650.0
[2026-01-09 11:05:10] 2026-01-09 10:04:22,429 | INFO     | sum of deviations: -42723257714.0
[2026-01-09 11:05:10] 2026-01-09 10:04:22,430 | INFO     | mean x: 1767948518.0
[2026-01-09 11:05:10] 2026-01-09 10:04:22,430 | INFO     | mean y: 2557174.563758389
[2026-01-09 11:05:10] 2026-01-09 10:04:22,430 | INFO     | intersect: 73642985931.82317
[2026-01-09 11:05:10] 2026-01-09 10:04:22,430 | INFO     | chi2: 0.9569535597669734
[2026-01-09 11:05:10] 2026-01-09 10:04:22,430 | INFO     | current chi2=0.9569535597669734 (change=60.90241026100678 %)
[2026-01-09 11:05:10] 2026-01-09 10:04:22,431 | INFO     | sum of square deviations: 925859220.0
[2026-01-09 11:05:10] 2026-01-09 10:04:22,432 | INFO     | sum of deviations: -40980445624.00001
[2026-01-09 11:05:10] 2026-01-09 10:04:22,432 | INFO     | mean x: 1767948670.5
[2026-01-09 11:05:10] 2026-01-09 10:04:22,432 | INFO     | mean y: 2554437.4166666665
[2026-01-09 11:05:10] 2026-01-09 10:04:22,432 | INFO     | intersect: 78255622282.2758
[2026-01-09 11:05:10] 2026-01-09 10:04:22,432 | INFO     | chi2: 0.9429845259705498
[2026-01-09 11:05:10] 2026-01-09 10:04:22,433 | INFO     | current chi2=0.9429845259705498 (change=1.4597399898721461 %)
[2026-01-09 11:05:10] 2026-01-09 10:04:22,433 | INFO     | left removable region: 20
[2026-01-09 11:05:10] 2026-01-09 10:04:22,433 | INFO     | sum of square deviations: 576985702.0
[2026-01-09 11:05:10] 2026-01-09 10:04:22,434 | INFO     | sum of deviations: -20532097970.000004
[2026-01-09 11:05:10] 2026-01-09 10:04:22,434 | INFO     | mean x: 1767948640.0
[2026-01-09 11:05:10] 2026-01-09 10:04:22,434 | INFO     | mean y: 2559507.2926829266
[2026-01-09 11:05:10] 2026-01-09 10:04:22,434 | INFO     | intersect: 62915201114.49887
[2026-01-09 11:05:10] 2026-01-09 10:04:22,434 | INFO     | chi2: 0.1352174966013724
[2026-01-09 11:05:10] 2026-01-09 10:04:22,435 | INFO     | current memory leak: -35.59 B/s (using 123 data points, chi2=0.14)
[2026-01-09 11:05:10] 2026-01-09 10:04:22,435 | INFO     | could have reported an average CPU frequency of 1999 MHz (8 samples)
[2026-01-09 11:05:10] 2026-01-09 10:04:22,435 | INFO     | ..............................
[2026-01-09 11:05:10] 2026-01-09 10:04:22,435 | INFO     | . Timing measurements:
[2026-01-09 11:05:10] 2026-01-09 10:04:22,436 | INFO     | . get job = 0 s
[2026-01-09 11:05:10] 2026-01-09 10:04:22,436 | INFO     | . initial setup = 2 s
[2026-01-09 11:05:10] 2026-01-09 10:04:22,436 | INFO     | . payload setup = 6 s
[2026-01-09 11:05:10] 2026-01-09 10:04:22,436 | INFO     | . stage-in = 0 s
[2026-01-09 11:05:10] 2026-01-09 10:04:22,436 | INFO     | . payload execution = 9355 s
[2026-01-09 11:05:10] 2026-01-09 10:04:22,436 | INFO     | . stage-out = 1 s
[2026-01-09 11:05:10] 2026-01-09 10:04:22,436 | INFO     | . log creation = 0 s
[2026-01-09 11:05:10] 2026-01-09 10:04:22,436 | INFO     | ..............................
[2026-01-09 11:05:10] 2026-01-09 10:04:22,551 | INFO     | 
[2026-01-09 11:05:10] 2026-01-09 10:04:22,552 | INFO     | job summary report
[2026-01-09 11:05:10] 2026-01-09 10:04:22,552 | INFO     | --------------------------------------------------
[2026-01-09 11:05:10] 2026-01-09 10:04:22,552 | INFO     | PanDA job id: 6963162311
[2026-01-09 11:05:10] 2026-01-09 10:04:22,552 | INFO     | task id: 47898826
[2026-01-09 11:05:10] 2026-01-09 10:04:22,552 | INFO     | errors: (none)
[2026-01-09 11:05:10] 2026-01-09 10:04:22,552 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 11:05:10] 2026-01-09 10:04:22,552 | INFO     | pilot state: finished 
[2026-01-09 11:05:10] 2026-01-09 10:04:22,553 | INFO     | transexitcode: 0
[2026-01-09 11:05:10] 2026-01-09 10:04:22,553 | INFO     | exeerrorcode: 0
[2026-01-09 11:05:10] 2026-01-09 10:04:22,553 | INFO     | exeerrordiag: 
[2026-01-09 11:05:10] 2026-01-09 10:04:22,553 | INFO     | exitcode: 0
[2026-01-09 11:05:10] 2026-01-09 10:04:22,553 | INFO     | exitmsg: OK
[2026-01-09 11:05:10] 2026-01-09 10:04:22,553 | INFO     | cpuconsumptiontime: 69627 s
[2026-01-09 11:05:10] 2026-01-09 10:04:22,553 | INFO     | nevents: 400
[2026-01-09 11:05:10] 2026-01-09 10:04:22,553 | INFO     | neventsw: 0
[2026-01-09 11:05:10] 2026-01-09 10:04:22,553 | INFO     | pid: 19659
[2026-01-09 11:05:10] 2026-01-09 10:04:22,553 | INFO     | pgrp: 19659
[2026-01-09 11:05:10] 2026-01-09 10:04:22,554 | INFO     | corecount: 8
[2026-01-09 11:05:10] 2026-01-09 10:04:22,554 | INFO     | event service: False
[2026-01-09 11:05:10] 2026-01-09 10:04:22,554 | INFO     | sizes: {0: 2283800, 1: 2283999, 6: 2284261, 12: 2284289, 9365: 2312253, 9366: 2321253, 9369: 2321437, 9377: 2321631}
[2026-01-09 11:05:10] 2026-01-09 10:04:22,554 | INFO     | --------------------------------------------------
[2026-01-09 11:05:10] 2026-01-09 10:04:22,554 | INFO     | 
[2026-01-09 11:05:10] 2026-01-09 10:04:22,554 | INFO     | executing command: ls -lF /var/lib/boinc/slots/10
[2026-01-09 11:05:10] 2026-01-09 10:04:22,597 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 11:05:10] 2026-01-09 10:04:22,597 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 11:05:10] 2026-01-09 10:04:22,597 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 11:05:10] 2026-01-09 10:04:22,597 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 11:05:10] 2026-01-09 10:04:22,598 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 11:05:10] 2026-01-09 10:04:22,598 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 11:05:10] 2026-01-09 10:04:22,598 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 11:05:10] 2026-01-09 10:04:22,598 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 11:05:10] 2026-01-09 10:04:22,598 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 11:05:10] 2026-01-09 10:04:22,598 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 11:05:10] 2026-01-09 10:04:22,598 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 11:05:10] 2026-01-09 10:04:22,598 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 11:05:10] 2026-01-09 10:04:22,599 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 11:05:10] 2026-01-09 10:04:22,599 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 11:05:10] 2026-01-09 10:04:22,599 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 11:05:10] 2026-01-09 10:04:22,599 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 11:05:10] 2026-01-09 10:04:22,599 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 11:05:10] 2026-01-09 10:04:22,599 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 11:05:10] 2026-01-09 10:04:22,599 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 11:05:10] 2026-01-09 10:04:22,599 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 11:05:10] 2026-01-09 10:04:22,600 | INFO     | job 6963162311 has completed (purged errors)
[2026-01-09 11:05:10] 2026-01-09 10:04:22,600 | INFO     | overall cleanup function is called
[2026-01-09 11:05:10] 2026-01-09 10:04:23,608 | INFO     | --- collectZombieJob: --- 10, [19659]
[2026-01-09 11:05:10] 2026-01-09 10:04:23,608 | INFO     | zombie collector waiting for pid 19659
[2026-01-09 11:05:10] 2026-01-09 10:04:23,609 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 11:05:10] 2026-01-09 10:04:23,609 | INFO     | collected zombie processes
[2026-01-09 11:05:10] 2026-01-09 10:04:23,609 | INFO     | will attempt to kill all subprocesses of pid=19659
[2026-01-09 11:05:10] 2026-01-09 10:04:23,671 | INFO     | process IDs to be killed: [19659] (in reverse order)
[2026-01-09 11:05:10] 2026-01-09 10:04:23,718 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 11:05:10] 2026-01-09 10:04:23,718 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 11:05:10] 2026-01-09 10:04:23,720 | INFO     | did not find any defunct processes belonging to 19659
[2026-01-09 11:05:10] 2026-01-09 10:04:23,722 | INFO     | did not find any defunct processes belonging to 19659
[2026-01-09 11:05:10] 2026-01-09 10:04:23,722 | INFO     | ready for new job
[2026-01-09 11:05:10] 2026-01-09 10:04:23,722 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 11:05:10] 2026-01-09 10:04:23,724 | INFO     | ***************************************
[2026-01-09 11:05:10] 2026-01-09 10:04:23,724 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 11:05:10] 2026-01-09 10:04:23,724 | INFO     | ***************************************
[2026-01-09 11:05:10] 2026-01-09 10:04:23,724 | INFO     | 
[2026-01-09 11:05:10] 2026-01-09 10:04:23,725 | INFO     | pilot is running in a VM
[2026-01-09 11:05:10] 2026-01-09 10:04:23,725 | INFO     | architecture information:
[2026-01-09 11:05:10] 2026-01-09 10:04:23,725 | INFO     | executing command: cat /etc/os-release
[2026-01-09 11:05:10] 2026-01-09 10:04:23,742 | INFO     | cat /etc/os-release:
[2026-01-09 11:05:10] NAME="CentOS Linux"
[2026-01-09 11:05:10] VERSION="7 (Core)"
[2026-01-09 11:05:10] ID="centos"
[2026-01-09 11:05:10] ID_LIKE="rhel fedora"
[2026-01-09 11:05:10] VERSION_ID="7"
[2026-01-09 11:05:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 11:05:10] ANSI_COLOR="0;31"
[2026-01-09 11:05:10] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 11:05:10] HOME_URL="https://www.centos.org/"
[2026-01-09 11:05:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 11:05:10] 
[2026-01-09 11:05:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 11:05:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 11:05:10] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 11:05:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 11:05:10] 
[2026-01-09 11:05:10] 2026-01-09 10:04:23,743 | INFO     | ***************************************
[2026-01-09 11:05:10] 2026-01-09 10:04:24,246 | INFO     | executing command: df -mP /var/lib/boinc/slots/10
[2026-01-09 11:05:10] 2026-01-09 10:04:24,264 | INFO     | sufficient remaining disk space (498153291776 B)
[2026-01-09 11:05:10] 2026-01-09 10:04:24,265 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 11:05:10] 2026-01-09 10:04:24,265 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 11:05:10] 2026-01-09 10:04:24,265 | INFO     | update_server=False
[2026-01-09 11:05:10] 2026-01-09 10:04:24,265 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 11:05:10] 2026-01-09 10:04:24,266 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 11:05:10] 2026-01-09 10:04:24,394 | INFO     | all data control threads have been joined
[2026-01-09 11:05:10] 2026-01-09 10:04:24,536 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 11:05:10] 2026-01-09 10:04:24,796 | INFO     | all job control threads have been joined
[2026-01-09 11:05:10] 2026-01-09 10:04:24,807 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 11:05:10] 2026-01-09 10:04:25,139 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 11:05:10] 2026-01-09 10:04:25,139 | INFO     | aborting loop
[2026-01-09 11:05:10] 2026-01-09 10:04:25,267 | INFO     | [job] queue monitor thread has finished
[2026-01-09 11:05:10] 2026-01-09 10:04:25,271 | INFO     | [job] retrieve thread has finished
[2026-01-09 11:05:10] 2026-01-09 10:04:25,400 | INFO     | [data] control thread has finished
[2026-01-09 11:05:10] 2026-01-09 10:04:25,456 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 11:05:10] 2026-01-09 10:04:25,497 | INFO     | [payload] failed_post thread has finished
[2026-01-09 11:05:10] 2026-01-09 10:04:25,548 | INFO     | [data] copytool_in thread has finished
[2026-01-09 11:05:10] 2026-01-09 10:04:25,568 | INFO     | all payload control threads have been joined
[2026-01-09 11:05:10] 2026-01-09 10:04:25,724 | INFO     | [job] validate thread has finished
[2026-01-09 11:05:10] 2026-01-09 10:04:25,802 | INFO     | [job] control thread has finished
[2026-01-09 11:05:10] 2026-01-09 10:04:25,977 | INFO     | [payload] validate_post thread has finished
[2026-01-09 11:05:10] 2026-01-09 10:04:26,090 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 11:05:10] 2026-01-09 10:04:26,144 | INFO     | [job] job monitor thread has finished
[2026-01-09 11:05:10] 2026-01-09 10:04:26,480 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 11:05:10] 2026-01-09 10:04:26,555 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 11:05:10] 2026-01-09 10:04:26,573 | INFO     | [payload] control thread has finished
[2026-01-09 11:05:10] 2026-01-09 10:04:26,814 | INFO     | [data] copytool_out thread has finished
[2026-01-09 11:05:10] 2026-01-09 10:04:28,540 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 11:05:10] 2026-01-09 10:04:55,204 | INFO     | PID=13230 has CPU usage=3.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-09 11:05:10] 2026-01-09 10:04:55,205 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 11:05:10] 2026-01-09 10:04:55,205 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 11:05:10] 2026-01-09 10:04:55,205 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 11:05:10] 2026-01-09 10:05:04,620 | INFO     | [monitor] cgroup control has ended
[2026-01-09 11:05:10] 2026-01-09 10:05:05,288 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139882729867072)>', '<ExcThread(monitor, started 139882269742848)>']
[2026-01-09 11:05:10] 2026-01-09 10:05:06,264 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 11:05:10] 2026-01-09 10:05:06,265 | INFO     | [monitor] control thread has ended
[2026-01-09 11:05:10] 2026-01-09 10:05:10,314 | INFO     | all workflow threads have been joined
[2026-01-09 11:05:10] 2026-01-09 10:05:10,314 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 11:05:10] 2026-01-09 10:05:10,314 | INFO     | traces error code: 0
[2026-01-09 11:05:10] 2026-01-09 10:05:10,315 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 11:05:10] 2026-01-09 10:05:10,442 [wrapper] ==== pilot stdout END ====
[2026-01-09 11:05:10] 2026-01-09 10:05:10,446 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 11:05:10] 2026-01-09 10:05:10,450 [wrapper] pilotpid: 13230
[2026-01-09 11:05:10] 2026-01-09 10:05:10,454 [wrapper] Pilot exit status: 0
[2026-01-09 11:05:10] 2026-01-09 10:05:10,469 [wrapper] pandaids: 6963162311
[2026-01-09 11:05:10] 2026-01-09 10:05:10,509 [wrapper] cleanup supervisor_pilot  3723 13231
[2026-01-09 11:05:10] 2026-01-09 10:05:10,512 [wrapper] Test setup, not cleaning
[2026-01-09 11:05:10] 2026-01-09 10:05:10,516 [wrapper] apfmon messages muted
[2026-01-09 11:05:10] 2026-01-09 10:05:10,532 [wrapper] ==== wrapper stdout END ====
[2026-01-09 11:05:10] 2026-01-09 10:05:10,536 [wrapper] ==== wrapper stderr END ====
[2026-01-09 11:05:10]  *** Error codes and diagnostics ***
[2026-01-09 11:05:10]     "exeErrorCode": 0,
[2026-01-09 11:05:10]     "exeErrorDiag": "",
[2026-01-09 11:05:10]     "pilotErrorCode": 0,
[2026-01-09 11:05:10]     "pilotErrorDiag": "",
[2026-01-09 11:05:10]  *** Listing of results directory ***
[2026-01-09 11:05:10] total 438924
[2026-01-09 11:05:10] -rw-r--r--. 1 boinc boinc    579449 Jan  8 22:44 pilot3.tar.gz
[2026-01-09 11:05:10] -rwx------. 1 boinc boinc     36322 Jan  8 22:49 runpilot2-wrapper.sh
[2026-01-09 11:05:10] -rw-r--r--. 1 boinc boinc      5112 Jan  8 22:51 queuedata.json
[2026-01-09 11:05:10] -rw-r--r--. 1 boinc boinc       100 Jan  9 08:27 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 11:05:10] -rwxr-xr-x. 1 boinc boinc      7986 Jan  9 08:27 run_atlas
[2026-01-09 11:05:10] -rw-r--r--. 1 boinc boinc       105 Jan  9 08:27 job.xml
[2026-01-09 11:05:10] -rw-r--r--. 1 boinc boinc      6390 Jan  9 08:27 init_data.xml
[2026-01-09 11:05:10] -rw-r--r--. 2 boinc boinc 226772031 Jan  9 08:27 EVNT.47898824._001293.pool.root.1
[2026-01-09 11:05:10] -rw-r--r--. 2 boinc boinc     15847 Jan  9 08:27 start_atlas.sh
[2026-01-09 11:05:10] drwxrwx--x. 2 boinc boinc        68 Jan  9 08:27 shared
[2026-01-09 11:05:10] -rw-r--r--. 2 boinc boinc    592394 Jan  9 08:27 input.tar.gz
[2026-01-09 11:05:10] -rw-r--r--. 1 boinc boinc         0 Jan  9 08:27 boinc_lockfile
[2026-01-09 11:05:10] -rw-r--r--. 1 boinc boinc      2519 Jan  9 08:27 pandaJob.out
[2026-01-09 11:05:10] -rw-------. 1 boinc boinc    989771 Jan  9 08:27 agis_schedconf.cvmfs.json
[2026-01-09 11:05:10] -rw-------. 1 boinc boinc   1516240 Jan  9 08:27 agis_ddmendpoints.agis.ALL.json
[2026-01-09 11:05:10] drwx------. 5 boinc boinc      4096 Jan  9 08:27 pilot3
[2026-01-09 11:05:10] -rw-------. 1 boinc boinc 215504309 Jan  9 11:03 HITS.47898826._033932.pool.root.1
[2026-01-09 11:05:10] -rw-r--r--. 1 boinc boinc       530 Jan  9 11:03 boinc_task_state.xml
[2026-01-09 11:05:10] -rw-------. 1 boinc boinc      1023 Jan  9 11:04 memory_monitor_summary.json
[2026-01-09 11:05:10] -rw-------. 1 boinc boinc    380569 Jan  9 11:04 log.47898826._033932.job.log.tgz.1
[2026-01-09 11:05:10] -rw-------. 1 boinc boinc      7771 Jan  9 11:04 heartbeat.json
[2026-01-09 11:05:10] -rw-r--r--. 1 boinc boinc        27 Jan  9 11:04 wrapper_checkpoint.txt
[2026-01-09 11:05:10] -rw-r--r--. 1 boinc boinc      8192 Jan  9 11:04 boinc_mmap_file
[2026-01-09 11:05:10] -rw-------. 1 boinc boinc        95 Jan  9 11:04 pilot_heartbeat.json
[2026-01-09 11:05:10] -rw-------. 1 boinc boinc      4810 Jan  9 11:05 pilotlog.txt
[2026-01-09 11:05:10] -rw-------. 1 boinc boinc   1262067 Jan  9 11:05 log.47898826._033932.job.log.1
[2026-01-09 11:05:10] -rw-------. 1 boinc boinc       357 Jan  9 11:05 output.list
[2026-01-09 11:05:10] -rw-r--r--. 1 boinc boinc       620 Jan  9 11:05 runtime_log
[2026-01-09 11:05:10] -rw-------. 1 boinc boinc   1658880 Jan  9 11:05 result.tar.gz
[2026-01-09 11:05:10] -rw-r--r--. 1 boinc boinc      8832 Jan  9 11:05 runtime_log.err
[2026-01-09 11:05:10] -rw-------. 1 boinc boinc       652 Jan  9 11:05 jzlKDmz3Cy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmIflKDmziyjJm.diag
[2026-01-09 11:05:10] -rw-r--r--. 1 boinc boinc     20764 Jan  9 11:05 stderr.txt
[2026-01-09 11:05:10] HITS file was successfully produced:
[2026-01-09 11:05:10] -rw-------. 1 boinc boinc 215504309 Jan  9 11:03 shared/HITS.pool.root.1
[2026-01-09 11:05:10]  *** Contents of shared directory: ***
[2026-01-09 11:05:10] total 434132
[2026-01-09 11:05:10] -rw-r--r--. 2 boinc boinc 226772031 Jan  9 08:27 ATLAS.root_0
[2026-01-09 11:05:10] -rw-r--r--. 2 boinc boinc     15847 Jan  9 08:27 start_atlas.sh
[2026-01-09 11:05:10] -rw-r--r--. 2 boinc boinc    592394 Jan  9 08:27 input.tar.gz
[2026-01-09 11:05:10] -rw-------. 1 boinc boinc 215504309 Jan  9 11:03 HITS.pool.root.1
[2026-01-09 11:05:10] -rw-------. 1 boinc boinc   1658880 Jan  9 11:05 result.tar.gz
11:05:12 (9472): run_atlas exited; CPU time 69687.508231
11:05:12 (9472): called boinc_finish(0)

</stderr_txt>
]]>

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