Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:01:00 (2344304): wrapper (7.7.26015): starting
17:01:00 (2344304): wrapper: running run_atlas (--nthreads 6)
[2026-01-09 17:01:00] Arguments: --nthreads 6
[2026-01-09 17:01:00] Threads: 6
[2026-01-09 17:01:00] Checking for CVMFS
[2026-01-09 17:01:00] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 17:01:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 17:01:00] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 17:01:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 17:01:01] 2.13.3.0 2288015 138 50516 154936 3 57 11917767 20971521 929 130560 0 174663 99.989 6894 20 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2026-01-09 17:01:01] CVMFS is ok
[2026-01-09 17:01:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 17:01:01] Checking for apptainer binary...
[2026-01-09 17:01:01] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 17:01:01] Running /usr/bin/apptainer --version
[2026-01-09 17:01:01] apptainer version 1.4.4-1.el9
[2026-01-09 17:01:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 17:01:01] testio006
[2026-01-09 17:01:01] apptainer works
[2026-01-09 17:01:01] Set ATHENA_PROC_NUMBER=6
[2026-01-09 17:01:01] Set ATHENA_CORE_NUMBER=6
[2026-01-09 17:01:01] Starting ATLAS job with PandaID=6963162121
[2026-01-09 17:01:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 19:16:32]  *** The last 200 lines of the pilot log: ***
[2026-01-09 19:16:32] 2026-01-09 10:15:55,146 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 19:16:32] 2026-01-09 10:15:55,146 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 19:16:32] 2026-01-09 10:15:55,147 | INFO     | fitting pss+swap vs Time
[2026-01-09 19:16:32] 2026-01-09 10:15:55,148 | INFO     | sum of square deviations: 697054930.0
[2026-01-09 19:16:32] 2026-01-09 10:15:55,148 | INFO     | sum of deviations: 25871536123.0
[2026-01-09 19:16:32] 2026-01-09 10:15:55,148 | INFO     | mean x: 1767949663.0
[2026-01-09 19:16:32] 2026-01-09 10:15:55,148 | INFO     | mean y: 2414938.244274809
[2026-01-09 19:16:32] 2026-01-09 10:15:55,148 | INFO     | intersect: -65615905227.64305
[2026-01-09 19:16:32] 2026-01-09 10:15:55,148 | INFO     | chi2: 1.904016341192776
[2026-01-09 19:16:32] 2026-01-09 10:15:55,148 | INFO     | sum of square deviations: 620244187.5
[2026-01-09 19:16:32] 2026-01-09 10:15:55,149 | INFO     | sum of deviations: 24407896755.000008
[2026-01-09 19:16:32] 2026-01-09 10:15:55,149 | INFO     | mean x: 1767949510.5
[2026-01-09 19:16:32] 2026-01-09 10:15:55,149 | INFO     | mean y: 2412050.253968254
[2026-01-09 19:16:32] 2026-01-09 10:15:55,149 | INFO     | intersect: -69570072448.58191
[2026-01-09 19:16:32] 2026-01-09 10:15:55,149 | INFO     | chi2: 1.9061575705421498
[2026-01-09 19:16:32] 2026-01-09 10:15:55,149 | INFO     | current chi2=1.9061575705421498 (change=-0.11245855946974209 %)
[2026-01-09 19:16:32] 2026-01-09 10:15:55,149 | INFO     | right removable region: 125
[2026-01-09 19:16:32] 2026-01-09 10:15:55,149 | INFO     | sum of square deviations: 620244187.5
[2026-01-09 19:16:32] 2026-01-09 10:15:55,150 | INFO     | sum of deviations: -281513536.0
[2026-01-09 19:16:32] 2026-01-09 10:15:55,150 | INFO     | mean x: 1767949815.5
[2026-01-09 19:16:32] 2026-01-09 10:15:55,150 | INFO     | mean y: 2466412.0793650793
[2026-01-09 19:16:32] 2026-01-09 10:15:55,150 | INFO     | intersect: 804895220.0590491
[2026-01-09 19:16:32] 2026-01-09 10:15:55,150 | INFO     | chi2: 0.02275668845010856
[2026-01-09 19:16:32] 2026-01-09 10:15:55,150 | INFO     | current chi2=0.02275668845010856 (change=98.80480603250219 %)
[2026-01-09 19:16:32] 2026-01-09 10:15:55,150 | INFO     | sum of square deviations: 549294020.0
[2026-01-09 19:16:32] 2026-01-09 10:15:55,150 | INFO     | sum of deviations: 591982003.0000005
[2026-01-09 19:16:32] 2026-01-09 10:15:55,150 | INFO     | mean x: 1767949968.0
[2026-01-09 19:16:32] 2026-01-09 10:15:55,151 | INFO     | mean y: 2464442.495867769
[2026-01-09 19:16:32] 2026-01-09 10:15:55,151 | INFO     | intersect: -1902880464.154357
[2026-01-09 19:16:32] 2026-01-09 10:15:55,151 | INFO     | chi2: 0.011271131926108508
[2026-01-09 19:16:32] 2026-01-09 10:15:55,151 | INFO     | current chi2=0.011271131926108508 (change=50.47112434298524 %)
[2026-01-09 19:16:32] 2026-01-09 10:15:55,151 | INFO     | sum of square deviations: 483971865.0
[2026-01-09 19:16:32] 2026-01-09 10:15:55,151 | INFO     | sum of deviations: 1388363355.0000002
[2026-01-09 19:16:32] 2026-01-09 10:15:55,151 | INFO     | mean x: 1767950120.5
[2026-01-09 19:16:32] 2026-01-09 10:15:55,151 | INFO     | mean y: 2462662.4482758623
[2026-01-09 19:16:32] 2026-01-09 10:15:55,151 | INFO     | intersect: -5069231248.457134
[2026-01-09 19:16:32] 2026-01-09 10:15:55,151 | INFO     | chi2: 0.002237315326717672
[2026-01-09 19:16:32] 2026-01-09 10:15:55,152 | INFO     | current chi2=0.002237315326717672 (change=80.1500386883491 %)
[2026-01-09 19:16:32] 2026-01-09 10:15:55,152 | INFO     | sum of square deviations: 424045160.0
[2026-01-09 19:16:32] 2026-01-09 10:15:55,152 | INFO     | sum of deviations: 873702695.0
[2026-01-09 19:16:32] 2026-01-09 10:15:55,152 | INFO     | mean x: 1767950273.0
[2026-01-09 19:16:32] 2026-01-09 10:15:55,152 | INFO     | mean y: 2463971.4774774774
[2026-01-09 19:16:32] 2026-01-09 10:15:55,152 | INFO     | intersect: -3640220968.367339
[2026-01-09 19:16:32] 2026-01-09 10:15:55,152 | INFO     | chi2: 0.0018659289174341011
[2026-01-09 19:16:32] 2026-01-09 10:15:55,152 | INFO     | current chi2=0.0018659289174341011 (change=16.59964533602091 %)
[2026-01-09 19:16:32] 2026-01-09 10:15:55,152 | INFO     | left removable region: 40
[2026-01-09 19:16:32] 2026-01-09 10:15:55,152 | INFO     | sum of square deviations: 190403570.0
[2026-01-09 19:16:32] 2026-01-09 10:15:55,153 | INFO     | sum of deviations: -250849263.00000045
[2026-01-09 19:16:32] 2026-01-09 10:15:55,153 | INFO     | mean x: 1767950700.0
[2026-01-09 19:16:32] 2026-01-09 10:15:55,153 | INFO     | mean y: 2465097.7529411763
[2026-01-09 19:16:32] 2026-01-09 10:15:55,153 | INFO     | intersect: 2331671058.0998764
[2026-01-09 19:16:32] 2026-01-09 10:15:55,153 | INFO     | chi2: 0.00018011751223502933
[2026-01-09 19:16:32] 2026-01-09 10:15:55,153 | INFO     | current memory leak: -1.32 B/s (using 85 data points, chi2=0.00)
[2026-01-09 19:16:32] 2026-01-09 10:15:55,153 | INFO     | could have reported an average CPU frequency of 3960 MHz (8 samples)
[2026-01-09 19:16:32] 2026-01-09 10:15:55,153 | INFO     | ..............................
[2026-01-09 19:16:32] 2026-01-09 10:15:55,153 | INFO     | . Timing measurements:
[2026-01-09 19:16:32] 2026-01-09 10:15:55,153 | INFO     | . get job = 0 s
[2026-01-09 19:16:32] 2026-01-09 10:15:55,153 | INFO     | . initial setup = 5 s
[2026-01-09 19:16:32] 2026-01-09 10:15:55,154 | INFO     | . payload setup = 5 s
[2026-01-09 19:16:32] 2026-01-09 10:15:55,154 | INFO     | . stage-in = 0 s
[2026-01-09 19:16:32] 2026-01-09 10:15:55,154 | INFO     | . payload execution = 7958 s
[2026-01-09 19:16:32] 2026-01-09 10:15:55,154 | INFO     | . stage-out = 0 s
[2026-01-09 19:16:32] 2026-01-09 10:15:55,154 | INFO     | . log creation = 0 s
[2026-01-09 19:16:32] 2026-01-09 10:15:55,154 | INFO     | ..............................
[2026-01-09 19:16:32] 2026-01-09 10:15:55,204 | INFO     | 
[2026-01-09 19:16:32] 2026-01-09 10:15:55,204 | INFO     | job summary report
[2026-01-09 19:16:32] 2026-01-09 10:15:55,204 | INFO     | --------------------------------------------------
[2026-01-09 19:16:32] 2026-01-09 10:15:55,204 | INFO     | PanDA job id: 6963162121
[2026-01-09 19:16:32] 2026-01-09 10:15:55,204 | INFO     | task id: 47898826
[2026-01-09 19:16:32] 2026-01-09 10:15:55,204 | INFO     | errors: (none)
[2026-01-09 19:16:32] 2026-01-09 10:15:55,204 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 19:16:32] 2026-01-09 10:15:55,204 | INFO     | pilot state: finished 
[2026-01-09 19:16:32] 2026-01-09 10:15:55,204 | INFO     | transexitcode: 0
[2026-01-09 19:16:32] 2026-01-09 10:15:55,204 | INFO     | exeerrorcode: 0
[2026-01-09 19:16:32] 2026-01-09 10:15:55,204 | INFO     | exeerrordiag: 
[2026-01-09 19:16:32] 2026-01-09 10:15:55,204 | INFO     | exitcode: 0
[2026-01-09 19:16:32] 2026-01-09 10:15:55,204 | INFO     | exitmsg: OK
[2026-01-09 19:16:32] 2026-01-09 10:15:55,204 | INFO     | cpuconsumptiontime: 44620 s
[2026-01-09 19:16:32] 2026-01-09 10:15:55,205 | INFO     | nevents: 400
[2026-01-09 19:16:32] 2026-01-09 10:15:55,205 | INFO     | neventsw: 0
[2026-01-09 19:16:32] 2026-01-09 10:15:55,205 | INFO     | pid: 2354826
[2026-01-09 19:16:32] 2026-01-09 10:15:55,205 | INFO     | pgrp: 2354826
[2026-01-09 19:16:32] 2026-01-09 10:15:55,205 | INFO     | corecount: 6
[2026-01-09 19:16:32] 2026-01-09 10:15:55,205 | INFO     | event service: False
[2026-01-09 19:16:32] 2026-01-09 10:15:55,205 | INFO     | sizes: {0: 2283800, 1: 2283999, 5: 2284261, 11: 2284317, 7967: 2312025, 7968: 2321023, 7970: 2321207, 8067: 2321401}
[2026-01-09 19:16:32] 2026-01-09 10:15:55,205 | INFO     | --------------------------------------------------
[2026-01-09 19:16:32] 2026-01-09 10:15:55,205 | INFO     | 
[2026-01-09 19:16:32] 2026-01-09 10:15:55,205 | INFO     | executing command: ls -lF /var/lib/boinc/slots/1
[2026-01-09 19:16:32] 2026-01-09 10:15:55,218 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 19:16:32] 2026-01-09 10:15:55,218 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 19:16:32] 2026-01-09 10:15:55,218 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 19:16:32] 2026-01-09 10:15:55,218 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 19:16:32] 2026-01-09 10:15:55,219 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 19:16:32] 2026-01-09 10:15:55,219 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 19:16:32] 2026-01-09 10:15:55,219 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 19:16:32] 2026-01-09 10:15:55,219 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 19:16:32] 2026-01-09 10:15:55,219 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 19:16:32] 2026-01-09 10:15:55,219 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 19:16:32] 2026-01-09 10:15:55,219 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 19:16:32] 2026-01-09 10:15:55,219 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 19:16:32] 2026-01-09 10:15:55,219 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 19:16:32] 2026-01-09 10:15:55,219 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 19:16:32] 2026-01-09 10:15:55,219 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 19:16:32] 2026-01-09 10:15:55,219 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 19:16:32] 2026-01-09 10:15:55,219 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 19:16:32] 2026-01-09 10:15:55,219 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 19:16:32] 2026-01-09 10:15:55,219 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 19:16:32] 2026-01-09 10:15:55,219 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 19:16:32] 2026-01-09 10:15:55,219 | INFO     | job 6963162121 has completed (purged errors)
[2026-01-09 19:16:32] 2026-01-09 10:15:55,219 | INFO     | overall cleanup function is called
[2026-01-09 19:16:32] 2026-01-09 10:15:56,226 | INFO     | --- collectZombieJob: --- 10, [2354826]
[2026-01-09 19:16:32] 2026-01-09 10:15:56,226 | INFO     | zombie collector waiting for pid 2354826
[2026-01-09 19:16:32] 2026-01-09 10:15:56,226 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 19:16:32] 2026-01-09 10:15:56,226 | INFO     | collected zombie processes
[2026-01-09 19:16:32] 2026-01-09 10:15:56,226 | INFO     | will attempt to kill all subprocesses of pid=2354826
[2026-01-09 19:16:32] 2026-01-09 10:15:56,288 | INFO     | process IDs to be killed: [2354826] (in reverse order)
[2026-01-09 19:16:32] 2026-01-09 10:15:56,316 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 19:16:32] 2026-01-09 10:15:56,316 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 19:16:32] 2026-01-09 10:15:56,318 | INFO     | did not find any defunct processes belonging to 2354826
[2026-01-09 19:16:32] 2026-01-09 10:15:56,320 | INFO     | did not find any defunct processes belonging to 2354826
[2026-01-09 19:16:32] 2026-01-09 10:15:56,320 | INFO     | ready for new job
[2026-01-09 19:16:32] 2026-01-09 10:15:56,320 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 19:16:32] 2026-01-09 10:15:56,321 | INFO     | ***************************************
[2026-01-09 19:16:32] 2026-01-09 10:15:56,321 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 19:16:32] 2026-01-09 10:15:56,321 | INFO     | ***************************************
[2026-01-09 19:16:32] 2026-01-09 10:15:56,321 | INFO     | 
[2026-01-09 19:16:32] 2026-01-09 10:15:56,322 | INFO     | architecture information:
[2026-01-09 19:16:32] 2026-01-09 10:15:56,322 | INFO     | executing command: cat /etc/os-release
[2026-01-09 19:16:32] 2026-01-09 10:15:56,331 | INFO     | cat /etc/os-release:
[2026-01-09 19:16:32] NAME="CentOS Linux"
[2026-01-09 19:16:32] VERSION="7 (Core)"
[2026-01-09 19:16:32] ID="centos"
[2026-01-09 19:16:32] ID_LIKE="rhel fedora"
[2026-01-09 19:16:32] VERSION_ID="7"
[2026-01-09 19:16:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 19:16:32] ANSI_COLOR="0;31"
[2026-01-09 19:16:32] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 19:16:32] HOME_URL="https://www.centos.org/"
[2026-01-09 19:16:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 19:16:32] 
[2026-01-09 19:16:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 19:16:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 19:16:32] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 19:16:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 19:16:32] 
[2026-01-09 19:16:32] 2026-01-09 10:15:56,331 | INFO     | ***************************************
[2026-01-09 19:16:32] 2026-01-09 10:15:56,834 | INFO     | executing command: df -mP /var/lib/boinc/slots/1
[2026-01-09 19:16:32] 2026-01-09 10:15:56,846 | INFO     | sufficient remaining disk space (93007642624 B)
[2026-01-09 19:16:32] 2026-01-09 10:15:56,846 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 19:16:32] 2026-01-09 10:15:56,846 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 19:16:32] 2026-01-09 10:15:56,846 | INFO     | update_server=False
[2026-01-09 19:16:32] 2026-01-09 10:15:56,846 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 19:16:32] 2026-01-09 10:15:56,847 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 19:16:32] 2026-01-09 10:15:57,051 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 19:16:32] 2026-01-09 10:15:57,051 | INFO     | aborting loop
[2026-01-09 19:16:32] 2026-01-09 10:15:57,462 | INFO     | all data control threads have been joined
[2026-01-09 19:16:32] 2026-01-09 10:15:57,544 | INFO     | all job control threads have been joined
[2026-01-09 19:16:32] 2026-01-09 10:15:57,632 | INFO     | all payload control threads have been joined
[2026-01-09 19:16:32] 2026-01-09 10:15:57,717 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 19:16:32] 2026-01-09 10:15:57,851 | INFO     | [job] retrieve thread has finished
[2026-01-09 19:16:32] 2026-01-09 10:15:57,852 | INFO     | [job] queue monitor thread has finished
[2026-01-09 19:16:32] 2026-01-09 10:15:57,897 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 19:16:32] 2026-01-09 10:15:57,990 | INFO     | [payload] validate_post thread has finished
[2026-01-09 19:16:32] 2026-01-09 10:15:58,021 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 19:16:32] 2026-01-09 10:15:58,056 | INFO     | [job] job monitor thread has finished
[2026-01-09 19:16:32] 2026-01-09 10:15:58,369 | INFO     | [payload] failed_post thread has finished
[2026-01-09 19:16:32] 2026-01-09 10:15:58,467 | INFO     | [data] control thread has finished
[2026-01-09 19:16:32] 2026-01-09 10:15:58,549 | INFO     | [job] control thread has finished
[2026-01-09 19:16:32] 2026-01-09 10:15:58,636 | INFO     | [payload] control thread has finished
[2026-01-09 19:16:32] 2026-01-09 10:15:58,700 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 19:16:32] 2026-01-09 10:15:58,858 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 19:16:32] 2026-01-09 10:15:58,918 | INFO     | [data] copytool_in thread has finished
[2026-01-09 19:16:32] 2026-01-09 10:15:59,235 | INFO     | [job] validate thread has finished
[2026-01-09 19:16:32] 2026-01-09 10:15:59,558 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 19:16:32] 2026-01-09 10:15:59,723 | INFO     | [data] copytool_out thread has finished
[2026-01-09 19:16:32] 2026-01-09 10:16:03,563 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 19:16:32] 2026-01-09 10:16:07,318 [wrapper] supervise_pilot (15 min periods counter: 10)
[2026-01-09 19:16:32] 2026-01-09 10:16:25,804 | INFO     | [monitor] cgroup control has ended
[2026-01-09 19:16:32] 2026-01-09 10:16:27,809 | INFO     | PID=2348083 has CPU usage=0.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 19:16:32] 2026-01-09 10:16:27,809 | INFO     | .. there are 2 such processes running
[2026-01-09 19:16:32] 2026-01-09 10:16:27,810 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 19:16:32] 2026-01-09 10:16:27,810 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 19:16:32] 2026-01-09 10:16:27,810 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 19:16:32] 2026-01-09 10:16:27,827 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139837458573120)>', '<ExcThread(monitor, started 139837013223168)>']
[2026-01-09 19:16:32] 2026-01-09 10:16:28,815 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 19:16:32] 2026-01-09 10:16:28,815 | INFO     | [monitor] control thread has ended
[2026-01-09 19:16:32] 2026-01-09 10:16:32,852 | INFO     | all workflow threads have been joined
[2026-01-09 19:16:32] 2026-01-09 10:16:32,852 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 19:16:32] 2026-01-09 10:16:32,852 | INFO     | traces error code: 0
[2026-01-09 19:16:32] 2026-01-09 10:16:32,852 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 19:16:32] 2026-01-09 10:16:32,920 [wrapper] ==== pilot stdout END ====
[2026-01-09 19:16:32] 2026-01-09 10:16:32,922 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 19:16:32] 2026-01-09 10:16:32,923 [wrapper] pilotpid: 2348083
[2026-01-09 19:16:32] 2026-01-09 10:16:32,925 [wrapper] Pilot exit status: 0
[2026-01-09 19:16:32] 2026-01-09 10:16:32,931 [wrapper] pandaids: 6963162121
[2026-01-09 19:16:32] 2026-01-09 10:16:32,949 [wrapper] cleanup supervisor_pilot 2404632 2348084
[2026-01-09 19:16:32] 2026-01-09 10:16:32,950 [wrapper] Test setup, not cleaning
[2026-01-09 19:16:32] 2026-01-09 10:16:32,952 [wrapper] apfmon messages muted
[2026-01-09 19:16:32] 2026-01-09 10:16:32,953 [wrapper] ==== wrapper stdout END ====
[2026-01-09 19:16:32] 2026-01-09 10:16:32,955 [wrapper] ==== wrapper stderr END ====
[2026-01-09 19:16:32]  *** Error codes and diagnostics ***
[2026-01-09 19:16:32]     "exeErrorCode": 0,
[2026-01-09 19:16:32]     "exeErrorDiag": "",
[2026-01-09 19:16:32]     "pilotErrorCode": 0,
[2026-01-09 19:16:32]     "pilotErrorDiag": "",
[2026-01-09 19:16:32]  *** Listing of results directory ***
[2026-01-09 19:16:32] total 445880
[2026-01-09 19:16:32] -rw-r--r--. 1 boinc boinc    579449 Jan  9 06:44 pilot3.tar.gz
[2026-01-09 19:16:32] -rwx------. 1 boinc boinc     36322 Jan  9 06:49 runpilot2-wrapper.sh
[2026-01-09 19:16:32] -rw-r--r--. 1 boinc boinc      5112 Jan  9 06:51 queuedata.json
[2026-01-09 19:16:32] -rw-r--r--. 1 boinc boinc       100 Jan  9 17:01 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 19:16:32] -rwxr-xr-x. 1 boinc boinc      7986 Jan  9 17:01 run_atlas
[2026-01-09 19:16:32] -rw-r--r--. 1 boinc boinc       105 Jan  9 17:01 job.xml
[2026-01-09 19:16:32] -rw-r--r--. 1 boinc boinc      9356 Jan  9 17:01 init_data.xml
[2026-01-09 19:16:32] -rw-r--r--. 2 boinc boinc 224920926 Jan  9 17:01 EVNT.47898824._001238.pool.root.1
[2026-01-09 19:16:32] -rw-r--r--. 2 boinc boinc     15847 Jan  9 17:01 start_atlas.sh
[2026-01-09 19:16:32] drwxrwx--x. 2 boinc boinc        68 Jan  9 17:01 shared
[2026-01-09 19:16:32] -rw-r--r--. 2 boinc boinc    592405 Jan  9 17:01 input.tar.gz
[2026-01-09 19:16:32] -rw-r--r--. 1 boinc boinc         0 Jan  9 17:01 boinc_lockfile
[2026-01-09 19:16:32] -rw-r--r--. 1 boinc boinc      2520 Jan  9 17:01 pandaJob.out
[2026-01-09 19:16:32] -rw-------. 1 boinc boinc    989771 Jan  9 17:01 agis_schedconf.cvmfs.json
[2026-01-09 19:16:32] -rw-------. 1 boinc boinc   1516240 Jan  9 17:01 agis_ddmendpoints.agis.ALL.json
[2026-01-09 19:16:32] drwx------. 5 boinc boinc      4096 Jan  9 17:01 pilot3
[2026-01-09 19:16:32] -rw-------. 1 boinc boinc 224715009 Jan  9 19:13 HITS.47898826._033748.pool.root.1
[2026-01-09 19:16:32] -rw-r--r--. 1 boinc boinc       529 Jan  9 19:14 boinc_task_state.xml
[2026-01-09 19:16:32] -rw-------. 1 boinc boinc      1019 Jan  9 19:14 memory_monitor_summary.json
[2026-01-09 19:16:32] -rw-------. 1 boinc boinc    358507 Jan  9 19:14 log.47898826._033748.job.log.tgz.1
[2026-01-09 19:16:32] -rw-------. 1 boinc boinc      7762 Jan  9 19:15 heartbeat.json
[2026-01-09 19:16:32] -rw-r--r--. 1 boinc boinc        27 Jan  9 19:16 wrapper_checkpoint.txt
[2026-01-09 19:16:32] -rw-r--r--. 1 boinc boinc      8192 Jan  9 19:16 boinc_mmap_file
[2026-01-09 19:16:32] -rw-------. 1 boinc boinc        95 Jan  9 19:16 pilot_heartbeat.json
[2026-01-09 19:16:32] -rw-------. 1 boinc boinc      4823 Jan  9 19:16 pilotlog.txt
[2026-01-09 19:16:32] -rw-------. 1 boinc boinc   1159551 Jan  9 19:16 log.47898826._033748.job.log.1
[2026-01-09 19:16:32] -rw-------. 1 boinc boinc       357 Jan  9 19:16 output.list
[2026-01-09 19:16:32] -rw-r--r--. 1 boinc boinc       620 Jan  9 19:16 runtime_log
[2026-01-09 19:16:32] -rw-------. 1 boinc boinc   1536000 Jan  9 19:16 result.tar.gz
[2026-01-09 19:16:32] -rw-r--r--. 1 boinc boinc      8775 Jan  9 19:16 runtime_log.err
[2026-01-09 19:16:32] -rw-------. 1 boinc boinc       644 Jan  9 19:16 qkaNDml3Cy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmHelKDm3fERUo.diag
[2026-01-09 19:16:32] -rw-r--r--. 1 boinc boinc     20592 Jan  9 19:16 stderr.txt
[2026-01-09 19:16:33] HITS file was successfully produced:
[2026-01-09 19:16:33] -rw-------. 1 boinc boinc 224715009 Jan  9 19:13 shared/HITS.pool.root.1
[2026-01-09 19:16:33]  *** Contents of shared directory: ***
[2026-01-09 19:16:33] total 441204
[2026-01-09 19:16:33] -rw-r--r--. 2 boinc boinc 224920926 Jan  9 17:01 ATLAS.root_0
[2026-01-09 19:16:33] -rw-r--r--. 2 boinc boinc     15847 Jan  9 17:01 start_atlas.sh
[2026-01-09 19:16:33] -rw-r--r--. 2 boinc boinc    592405 Jan  9 17:01 input.tar.gz
[2026-01-09 19:16:33] -rw-------. 1 boinc boinc 224715009 Jan  9 19:13 HITS.pool.root.1
[2026-01-09 19:16:33] -rw-------. 1 boinc boinc   1536000 Jan  9 19:16 result.tar.gz
19:16:34 (2344304): run_atlas exited; CPU time 44693.094176
19:16:34 (2344304): called boinc_finish(0)

</stderr_txt>
]]>

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