Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:18:40 (22933): wrapper (7.7.26015): starting
12:18:40 (22933): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 12:18:41] Arguments: --nthreads 8
[2026-01-09 12:18:41] Threads: 8
[2026-01-09 12:18:41] Checking for CVMFS
[2026-01-09 12:18:41] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 12:18:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 12:18:41] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 12:18:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 12:18:41] 2.11.2.0 9903 25958 97724 154942 2 71 14273901 25165824 0 130560 0 2697602 99.430 3369145 2589 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-09 12:18:41] CVMFS is ok
[2026-01-09 12:18:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 12:18:41] Checking for apptainer binary...
[2026-01-09 12:18:41] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 12:18:41] Running /usr/bin/apptainer --version
[2026-01-09 12:18:41] apptainer version 1.3.2-1.el7
[2026-01-09 12:18:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 12:18:42] cg-vwn423.simple-grid.lan
[2026-01-09 12:18:42] apptainer works
[2026-01-09 12:18:42] Set ATHENA_PROC_NUMBER=8
[2026-01-09 12:18:42] Set ATHENA_CORE_NUMBER=8
[2026-01-09 12:18:42] Starting ATLAS job with PandaID=6963162120
[2026-01-09 12:18:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 15:02:20]  *** The last 200 lines of the pilot log: ***
[2026-01-09 15:02:20] 2026-01-09 14:01:28,165 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2026-01-09 15:02:20] 2026-01-09 14:01:28,167 | INFO     | using path: /var/lib/boinc/slots/7/PanDA_Pilot-6963162120/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 15:02:20] 2026-01-09 14:01:28,168 | INFO     | extracted standard info from prmon json
[2026-01-09 15:02:20] 2026-01-09 14:01:28,168 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 15:02:20] 2026-01-09 14:01:28,168 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 15:02:20] 2026-01-09 14:01:28,168 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 15:02:20] 2026-01-09 14:01:28,169 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 15:02:20] 2026-01-09 14:01:28,172 | INFO     | fitting pss+swap vs Time
[2026-01-09 15:02:20] 2026-01-09 14:01:28,173 | INFO     | sum of square deviations: 1270051720.0
[2026-01-09 15:02:20] 2026-01-09 14:01:28,174 | INFO     | sum of deviations: -28152566981.500004
[2026-01-09 15:02:20] 2026-01-09 14:01:28,174 | INFO     | mean x: 1767962419.5
[2026-01-09 15:02:20] 2026-01-09 14:01:28,174 | INFO     | mean y: 2589734.38125
[2026-01-09 15:02:20] 2026-01-09 14:01:28,175 | INFO     | intersect: 39192080722.786476
[2026-01-09 15:02:20] 2026-01-09 14:01:28,175 | INFO     | chi2: 2.572511328574474
[2026-01-09 15:02:20] 2026-01-09 14:01:28,175 | INFO     | sum of square deviations: 1154663510.0
[2026-01-09 15:02:20] 2026-01-09 14:01:28,176 | INFO     | sum of deviations: -15233192852.999996
[2026-01-09 15:02:20] 2026-01-09 14:01:28,177 | INFO     | mean x: 1767962267.0
[2026-01-09 15:02:20] 2026-01-09 14:01:28,177 | INFO     | mean y: 2606457.264516129
[2026-01-09 15:02:20] 2026-01-09 14:01:28,177 | INFO     | intersect: 23326899584.045727
[2026-01-09 15:02:20] 2026-01-09 14:01:28,177 | INFO     | chi2: 1.8154190342985037
[2026-01-09 15:02:20] 2026-01-09 14:01:28,177 | INFO     | current chi2=1.8154190342985037 (change=29.430085919019206 %)
[2026-01-09 15:02:20] 2026-01-09 14:01:28,178 | INFO     | sum of square deviations: 1046484737.5
[2026-01-09 15:02:20] 2026-01-09 14:01:28,179 | INFO     | sum of deviations: -13048956886.0
[2026-01-09 15:02:20] 2026-01-09 14:01:28,179 | INFO     | mean x: 1767962114.5
[2026-01-09 15:02:20] 2026-01-09 14:01:28,179 | INFO     | mean y: 2609537.506666667
[2026-01-09 15:02:20] 2026-01-09 14:01:28,179 | INFO     | intersect: 22047901343.008892
[2026-01-09 15:02:20] 2026-01-09 14:01:28,179 | INFO     | chi2: 1.8170844941785085
[2026-01-09 15:02:20] 2026-01-09 14:01:28,180 | INFO     | current chi2=1.8170844941785085 (change=-0.09173969472278459 %)
[2026-01-09 15:02:20] 2026-01-09 14:01:28,180 | INFO     | right removable region: 149
[2026-01-09 15:02:20] 2026-01-09 14:01:28,180 | INFO     | sum of square deviations: 1154663510.0
[2026-01-09 15:02:20] 2026-01-09 14:01:28,181 | INFO     | sum of deviations: -54423188620.0
[2026-01-09 15:02:20] 2026-01-09 14:01:28,181 | INFO     | mean x: 1767962572.0
[2026-01-09 15:02:20] 2026-01-09 14:01:28,182 | INFO     | mean y: 2623986.1032258063
[2026-01-09 15:02:20] 2026-01-09 14:01:28,182 | INFO     | intersect: 83332667497.2698
[2026-01-09 15:02:20] 2026-01-09 14:01:28,182 | INFO     | chi2: 0.9845818796335887
[2026-01-09 15:02:20] 2026-01-09 14:01:28,182 | INFO     | current chi2=0.9845818796335887 (change=61.726820453724386 %)
[2026-01-09 15:02:20] 2026-01-09 14:01:28,183 | INFO     | sum of square deviations: 1046484737.5
[2026-01-09 15:02:20] 2026-01-09 14:01:28,184 | INFO     | sum of deviations: -56592755307.0
[2026-01-09 15:02:20] 2026-01-09 14:01:28,184 | INFO     | mean x: 1767962724.5
[2026-01-09 15:02:20] 2026-01-09 14:01:28,184 | INFO     | mean y: 2626970.066666667
[2026-01-09 15:02:20] 2026-01-09 14:01:28,184 | INFO     | intersect: 95612126348.48026
[2026-01-09 15:02:20] 2026-01-09 14:01:28,185 | INFO     | chi2: 0.9157098831682619
[2026-01-09 15:02:20] 2026-01-09 14:01:28,185 | INFO     | current chi2=0.9157098831682619 (change=6.995050172054505 %)
[2026-01-09 15:02:20] 2026-01-09 14:01:28,185 | INFO     | left removable region: 20
[2026-01-09 15:02:20] 2026-01-09 14:01:28,185 | INFO     | sum of square deviations: 665612480.0
[2026-01-09 15:02:20] 2026-01-09 14:01:28,186 | INFO     | sum of deviations: -35728446456.99999
[2026-01-09 15:02:20] 2026-01-09 14:01:28,186 | INFO     | mean x: 1767962694.0
[2026-01-09 15:02:20] 2026-01-09 14:01:28,186 | INFO     | mean y: 2643769.8682170543
[2026-01-09 15:02:20] 2026-01-09 14:01:28,187 | INFO     | intersect: 94902547765.88773
[2026-01-09 15:02:20] 2026-01-09 14:01:28,187 | INFO     | chi2: 0.10911808376489314
[2026-01-09 15:02:20] 2026-01-09 14:01:28,187 | INFO     | current memory leak: -53.68 B/s (using 129 data points, chi2=0.11)
[2026-01-09 15:02:20] 2026-01-09 14:01:28,188 | INFO     | could have reported an average CPU frequency of 1999 MHz (8 samples)
[2026-01-09 15:02:20] 2026-01-09 14:01:28,188 | INFO     | ..............................
[2026-01-09 15:02:20] 2026-01-09 14:01:28,188 | INFO     | . Timing measurements:
[2026-01-09 15:02:20] 2026-01-09 14:01:28,188 | INFO     | . get job = 0 s
[2026-01-09 15:02:20] 2026-01-09 14:01:28,189 | INFO     | . initial setup = 2 s
[2026-01-09 15:02:20] 2026-01-09 14:01:28,189 | INFO     | . payload setup = 7 s
[2026-01-09 15:02:20] 2026-01-09 14:01:28,189 | INFO     | . stage-in = 0 s
[2026-01-09 15:02:20] 2026-01-09 14:01:28,189 | INFO     | . payload execution = 9710 s
[2026-01-09 15:02:20] 2026-01-09 14:01:28,189 | INFO     | . stage-out = 1 s
[2026-01-09 15:02:20] 2026-01-09 14:01:28,189 | INFO     | . log creation = 0 s
[2026-01-09 15:02:20] 2026-01-09 14:01:28,189 | INFO     | ..............................
[2026-01-09 15:02:20] 2026-01-09 14:01:28,302 | INFO     | 
[2026-01-09 15:02:20] 2026-01-09 14:01:28,303 | INFO     | job summary report
[2026-01-09 15:02:20] 2026-01-09 14:01:28,303 | INFO     | --------------------------------------------------
[2026-01-09 15:02:20] 2026-01-09 14:01:28,303 | INFO     | PanDA job id: 6963162120
[2026-01-09 15:02:20] 2026-01-09 14:01:28,303 | INFO     | task id: 47898826
[2026-01-09 15:02:20] 2026-01-09 14:01:28,303 | INFO     | errors: (none)
[2026-01-09 15:02:20] 2026-01-09 14:01:28,303 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 15:02:20] 2026-01-09 14:01:28,303 | INFO     | pilot state: finished 
[2026-01-09 15:02:20] 2026-01-09 14:01:28,303 | INFO     | transexitcode: 0
[2026-01-09 15:02:20] 2026-01-09 14:01:28,303 | INFO     | exeerrorcode: 0
[2026-01-09 15:02:20] 2026-01-09 14:01:28,303 | INFO     | exeerrordiag: 
[2026-01-09 15:02:20] 2026-01-09 14:01:28,304 | INFO     | exitcode: 0
[2026-01-09 15:02:20] 2026-01-09 14:01:28,304 | INFO     | exitmsg: OK
[2026-01-09 15:02:20] 2026-01-09 14:01:28,304 | INFO     | cpuconsumptiontime: 72836 s
[2026-01-09 15:02:20] 2026-01-09 14:01:28,304 | INFO     | nevents: 400
[2026-01-09 15:02:20] 2026-01-09 14:01:28,304 | INFO     | neventsw: 0
[2026-01-09 15:02:20] 2026-01-09 14:01:28,304 | INFO     | pid: 703
[2026-01-09 15:02:20] 2026-01-09 14:01:28,304 | INFO     | pgrp: 703
[2026-01-09 15:02:20] 2026-01-09 14:01:28,304 | INFO     | corecount: 8
[2026-01-09 15:02:20] 2026-01-09 14:01:28,304 | INFO     | event service: False
[2026-01-09 15:02:20] 2026-01-09 14:01:28,305 | INFO     | sizes: {0: 2283143, 1: 2283999, 6: 2284261, 12: 2284289, 9722: 2312666, 9723: 2321664, 9726: 2321848, 9733: 2322042}
[2026-01-09 15:02:20] 2026-01-09 14:01:28,305 | INFO     | --------------------------------------------------
[2026-01-09 15:02:20] 2026-01-09 14:01:28,305 | INFO     | 
[2026-01-09 15:02:20] 2026-01-09 14:01:28,305 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2026-01-09 15:02:20] 2026-01-09 14:01:28,336 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 15:02:20] 2026-01-09 14:01:28,337 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 15:02:20] 2026-01-09 14:01:28,337 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 15:02:20] 2026-01-09 14:01:28,337 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 15:02:20] 2026-01-09 14:01:28,337 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 15:02:20] 2026-01-09 14:01:28,337 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 15:02:20] 2026-01-09 14:01:28,337 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 15:02:20] 2026-01-09 14:01:28,337 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 15:02:20] 2026-01-09 14:01:28,337 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 15:02:20] 2026-01-09 14:01:28,338 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 15:02:20] 2026-01-09 14:01:28,338 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 15:02:20] 2026-01-09 14:01:28,338 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 15:02:20] 2026-01-09 14:01:28,338 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 15:02:20] 2026-01-09 14:01:28,338 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 15:02:20] 2026-01-09 14:01:28,338 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 15:02:20] 2026-01-09 14:01:28,338 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 15:02:20] 2026-01-09 14:01:28,338 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 15:02:20] 2026-01-09 14:01:28,339 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 15:02:20] 2026-01-09 14:01:28,339 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 15:02:20] 2026-01-09 14:01:28,339 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 15:02:20] 2026-01-09 14:01:28,339 | INFO     | job 6963162120 has completed (purged errors)
[2026-01-09 15:02:20] 2026-01-09 14:01:28,339 | INFO     | overall cleanup function is called
[2026-01-09 15:02:20] 2026-01-09 14:01:29,348 | INFO     | --- collectZombieJob: --- 10, [703]
[2026-01-09 15:02:20] 2026-01-09 14:01:29,348 | INFO     | zombie collector waiting for pid 703
[2026-01-09 15:02:20] 2026-01-09 14:01:29,348 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 15:02:20] 2026-01-09 14:01:29,348 | INFO     | collected zombie processes
[2026-01-09 15:02:20] 2026-01-09 14:01:29,348 | INFO     | will attempt to kill all subprocesses of pid=703
[2026-01-09 15:02:20] 2026-01-09 14:01:29,412 | INFO     | process IDs to be killed: [703] (in reverse order)
[2026-01-09 15:02:20] 2026-01-09 14:01:29,458 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 15:02:20] 2026-01-09 14:01:29,458 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 15:02:20] 2026-01-09 14:01:29,461 | INFO     | did not find any defunct processes belonging to 703
[2026-01-09 15:02:20] 2026-01-09 14:01:29,462 | INFO     | did not find any defunct processes belonging to 703
[2026-01-09 15:02:20] 2026-01-09 14:01:29,463 | INFO     | ready for new job
[2026-01-09 15:02:20] 2026-01-09 14:01:29,463 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 15:02:20] 2026-01-09 14:01:29,465 | INFO     | ***************************************
[2026-01-09 15:02:20] 2026-01-09 14:01:29,465 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 15:02:20] 2026-01-09 14:01:29,465 | INFO     | ***************************************
[2026-01-09 15:02:20] 2026-01-09 14:01:29,465 | INFO     | 
[2026-01-09 15:02:20] 2026-01-09 14:01:29,466 | INFO     | pilot is running in a VM
[2026-01-09 15:02:20] 2026-01-09 14:01:29,466 | INFO     | architecture information:
[2026-01-09 15:02:20] 2026-01-09 14:01:29,467 | INFO     | executing command: cat /etc/os-release
[2026-01-09 15:02:20] 2026-01-09 14:01:29,485 | INFO     | cat /etc/os-release:
[2026-01-09 15:02:20] NAME="CentOS Linux"
[2026-01-09 15:02:20] VERSION="7 (Core)"
[2026-01-09 15:02:20] ID="centos"
[2026-01-09 15:02:20] ID_LIKE="rhel fedora"
[2026-01-09 15:02:20] VERSION_ID="7"
[2026-01-09 15:02:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 15:02:20] ANSI_COLOR="0;31"
[2026-01-09 15:02:20] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 15:02:20] HOME_URL="https://www.centos.org/"
[2026-01-09 15:02:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 15:02:20] 
[2026-01-09 15:02:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 15:02:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 15:02:20] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 15:02:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 15:02:20] 
[2026-01-09 15:02:20] 2026-01-09 14:01:29,486 | INFO     | ***************************************
[2026-01-09 15:02:20] 2026-01-09 14:01:29,989 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2026-01-09 15:02:20] 2026-01-09 14:01:30,010 | INFO     | sufficient remaining disk space (498148048896 B)
[2026-01-09 15:02:20] 2026-01-09 14:01:30,011 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 15:02:20] 2026-01-09 14:01:30,011 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 15:02:20] 2026-01-09 14:01:30,011 | INFO     | update_server=False
[2026-01-09 15:02:20] 2026-01-09 14:01:30,011 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 15:02:20] 2026-01-09 14:01:30,012 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 15:02:20] 2026-01-09 14:01:30,174 | INFO     | all job control threads have been joined
[2026-01-09 15:02:20] 2026-01-09 14:01:30,212 | INFO     | all data control threads have been joined
[2026-01-09 15:02:20] 2026-01-09 14:01:30,385 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-09 15:02:20] 2026-01-09 14:01:30,386 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-09 15:02:20] 2026-01-09 14:01:30,386 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 15:02:20] 2026-01-09 14:01:30,386 | INFO     | will abort loop
[2026-01-09 15:02:20] 2026-01-09 14:01:30,455 | INFO     | all payload control threads have been joined
[2026-01-09 15:02:20] 2026-01-09 14:01:31,017 | INFO     | [job] retrieve thread has finished
[2026-01-09 15:02:20] 2026-01-09 14:01:31,018 | INFO     | [job] queue monitor thread has finished
[2026-01-09 15:02:20] 2026-01-09 14:01:31,030 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 15:02:20] 2026-01-09 14:01:31,095 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 15:02:20] 2026-01-09 14:01:31,098 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 15:02:20] 2026-01-09 14:01:31,180 | INFO     | [job] control thread has finished
[2026-01-09 15:02:20] 2026-01-09 14:01:31,218 | INFO     | [data] control thread has finished
[2026-01-09 15:02:20] 2026-01-09 14:01:31,337 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 15:02:20] 2026-01-09 14:01:31,356 | INFO     | [payload] failed_post thread has finished
[2026-01-09 15:02:20] 2026-01-09 14:01:31,392 | INFO     | [job] job monitor thread has finished
[2026-01-09 15:02:20] 2026-01-09 14:01:31,461 | INFO     | [payload] control thread has finished
[2026-01-09 15:02:20] 2026-01-09 14:01:31,854 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 15:02:20] 2026-01-09 14:01:32,052 | INFO     | [job] validate thread has finished
[2026-01-09 15:02:20] 2026-01-09 14:01:32,116 | INFO     | [payload] validate_post thread has finished
[2026-01-09 15:02:20] 2026-01-09 14:01:32,417 | INFO     | [data] copytool_in thread has finished
[2026-01-09 15:02:20] 2026-01-09 14:01:33,344 | INFO     | [data] copytool_out thread has finished
[2026-01-09 15:02:20] 2026-01-09 14:01:35,862 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 15:02:20] 2026-01-09 14:01:40,395 | INFO     | job.realtimelogging is not enabled
[2026-01-09 15:02:20] 2026-01-09 14:01:41,400 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 15:02:20] 2026-01-09 14:02:00,274 | INFO     | PID=26666 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-09 15:02:20] 2026-01-09 14:02:00,275 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 15:02:20] 2026-01-09 14:02:00,275 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 15:02:20] 2026-01-09 14:02:00,275 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 15:02:20] 2026-01-09 14:02:14,018 | INFO     | [monitor] cgroup control has ended
[2026-01-09 15:02:20] 2026-01-09 14:02:15,094 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140156630193984)>', '<ExcThread(monitor, started 140156031977216)>']
[2026-01-09 15:02:20] 2026-01-09 14:02:15,349 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 15:02:20] 2026-01-09 14:02:15,349 | INFO     | [monitor] control thread has ended
[2026-01-09 15:02:20] 2026-01-09 14:02:20,120 | INFO     | all workflow threads have been joined
[2026-01-09 15:02:20] 2026-01-09 14:02:20,120 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 15:02:20] 2026-01-09 14:02:20,121 | INFO     | traces error code: 0
[2026-01-09 15:02:20] 2026-01-09 14:02:20,121 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 15:02:20] 2026-01-09 14:02:20,270 [wrapper] ==== pilot stdout END ====
[2026-01-09 15:02:20] 2026-01-09 14:02:20,276 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 15:02:20] 2026-01-09 14:02:20,281 [wrapper] pilotpid: 26666
[2026-01-09 15:02:20] 2026-01-09 14:02:20,288 [wrapper] Pilot exit status: 0
[2026-01-09 15:02:20] 2026-01-09 14:02:20,314 [wrapper] pandaids: 6963162120
[2026-01-09 15:02:20] 2026-01-09 14:02:20,359 [wrapper] cleanup supervisor_pilot 17502 26667
[2026-01-09 15:02:20] 2026-01-09 14:02:20,365 [wrapper] Test setup, not cleaning
[2026-01-09 15:02:20] 2026-01-09 14:02:20,371 [wrapper] apfmon messages muted
[2026-01-09 15:02:20] 2026-01-09 14:02:20,375 [wrapper] ==== wrapper stdout END ====
[2026-01-09 15:02:20] 2026-01-09 14:02:20,378 [wrapper] ==== wrapper stderr END ====
[2026-01-09 15:02:20]  *** Error codes and diagnostics ***
[2026-01-09 15:02:20]     "exeErrorCode": 0,
[2026-01-09 15:02:20]     "exeErrorDiag": "",
[2026-01-09 15:02:20]     "pilotErrorCode": 0,
[2026-01-09 15:02:20]     "pilotErrorDiag": "",
[2026-01-09 15:02:20]  *** Listing of results directory ***
[2026-01-09 15:02:20] total 438260
[2026-01-09 15:02:20] -rw-r--r--. 1 boinc boinc    579449 Jan  8 22:44 pilot3.tar.gz
[2026-01-09 15:02:20] -rwx------. 1 boinc boinc     36322 Jan  8 22:49 runpilot2-wrapper.sh
[2026-01-09 15:02:20] -rw-r--r--. 1 boinc boinc      5112 Jan  8 22:51 queuedata.json
[2026-01-09 15:02:20] -rw-r--r--. 1 boinc boinc       100 Jan  9 12:18 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 15:02:20] -rwxr-xr-x. 1 boinc boinc      7986 Jan  9 12:18 run_atlas
[2026-01-09 15:02:20] -rw-r--r--. 1 boinc boinc       105 Jan  9 12:18 job.xml
[2026-01-09 15:02:20] -rw-r--r--. 2 boinc boinc 224920926 Jan  9 12:18 EVNT.47898824._001238.pool.root.1
[2026-01-09 15:02:20] -rw-r--r--. 2 boinc boinc     15847 Jan  9 12:18 start_atlas.sh
[2026-01-09 15:02:20] drwxrwx--x. 2 boinc boinc        68 Jan  9 12:18 shared
[2026-01-09 15:02:20] -rw-r--r--. 2 boinc boinc    592400 Jan  9 12:18 input.tar.gz
[2026-01-09 15:02:20] -rw-r--r--. 1 boinc boinc      6390 Jan  9 12:18 init_data.xml
[2026-01-09 15:02:20] -rw-r--r--. 1 boinc boinc         0 Jan  9 12:18 boinc_lockfile
[2026-01-09 15:02:20] -rw-r--r--. 1 boinc boinc      2520 Jan  9 12:18 pandaJob.out
[2026-01-09 15:02:20] -rw-------. 1 boinc boinc    989377 Jan  9 12:18 agis_schedconf.cvmfs.json
[2026-01-09 15:02:20] -rw-------. 1 boinc boinc   1516240 Jan  9 12:18 agis_ddmendpoints.agis.ALL.json
[2026-01-09 15:02:20] drwx------. 5 boinc boinc      4096 Jan  9 12:18 pilot3
[2026-01-09 15:02:20] -rw-------. 1 boinc boinc 216532225 Jan  9 15:00 HITS.47898826._033747.pool.root.1
[2026-01-09 15:02:20] -rw-r--r--. 1 boinc boinc       530 Jan  9 15:00 boinc_task_state.xml
[2026-01-09 15:02:20] -rw-------. 1 boinc boinc      1016 Jan  9 15:01 memory_monitor_summary.json
[2026-01-09 15:02:20] -rw-------. 1 boinc boinc    406958 Jan  9 15:01 log.47898826._033747.job.log.tgz.1
[2026-01-09 15:02:20] -rw-------. 1 boinc boinc      7777 Jan  9 15:01 heartbeat.json
[2026-01-09 15:02:20] -rw-------. 1 boinc boinc        95 Jan  9 15:02 pilot_heartbeat.json
[2026-01-09 15:02:20] -rw-r--r--. 1 boinc boinc      8192 Jan  9 15:02 boinc_mmap_file
[2026-01-09 15:02:20] -rw-r--r--. 1 boinc boinc        27 Jan  9 15:02 wrapper_checkpoint.txt
[2026-01-09 15:02:20] -rw-------. 1 boinc boinc      5067 Jan  9 15:02 pilotlog.txt
[2026-01-09 15:02:20] -rw-------. 1 boinc boinc   1304636 Jan  9 15:02 log.47898826._033747.job.log.1
[2026-01-09 15:02:20] -rw-------. 1 boinc boinc       357 Jan  9 15:02 output.list
[2026-01-09 15:02:20] -rw-r--r--. 1 boinc boinc       620 Jan  9 15:02 runtime_log
[2026-01-09 15:02:20] -rw-------. 1 boinc boinc   1730560 Jan  9 15:02 result.tar.gz
[2026-01-09 15:02:20] -rw-r--r--. 1 boinc boinc      8816 Jan  9 15:02 runtime_log.err
[2026-01-09 15:02:20] -rw-------. 1 boinc boinc       652 Jan  9 15:02 dWZNDml3Cy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmGelKDmeQoHFo.diag
[2026-01-09 15:02:20] -rw-r--r--. 1 boinc boinc     20709 Jan  9 15:02 stderr.txt
[2026-01-09 15:02:20] HITS file was successfully produced:
[2026-01-09 15:02:20] -rw-------. 1 boinc boinc 216532225 Jan  9 15:00 shared/HITS.pool.root.1
[2026-01-09 15:02:20]  *** Contents of shared directory: ***
[2026-01-09 15:02:20] total 433400
[2026-01-09 15:02:20] -rw-r--r--. 2 boinc boinc 224920926 Jan  9 12:18 ATLAS.root_0
[2026-01-09 15:02:20] -rw-r--r--. 2 boinc boinc     15847 Jan  9 12:18 start_atlas.sh
[2026-01-09 15:02:20] -rw-r--r--. 2 boinc boinc    592400 Jan  9 12:18 input.tar.gz
[2026-01-09 15:02:20] -rw-------. 1 boinc boinc 216532225 Jan  9 15:00 HITS.pool.root.1
[2026-01-09 15:02:20] -rw-------. 1 boinc boinc   1730560 Jan  9 15:02 result.tar.gz
15:02:21 (22933): run_atlas exited; CPU time 72904.032835
15:02:21 (22933): called boinc_finish(0)

</stderr_txt>
]]>

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