Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
23:47:53 (2583796): wrapper (7.7.26015): starting
23:47:53 (2583796): wrapper: running run_atlas (--nthreads 8)
[2026-01-08 23:47:53] Arguments: --nthreads 8
[2026-01-08 23:47:53] Threads: 8
[2026-01-08 23:47:53] Checking for CVMFS
[2026-01-08 23:47:54] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 23:47:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 23:47:54] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 23:47:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 23:47:55] 2.13.3.0 8081 21042 156672 154931 1 196 34915633 39288832 7381 16776704 0 8674578 99.554 9213449 35476 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-08 23:47:55] CVMFS is ok
[2026-01-08 23:47:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-08 23:47:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-08 23:47:55] Further information can be found at the LHC@home message board.
[2026-01-08 23:47:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 23:47:55] Checking for apptainer binary...
[2026-01-08 23:47:55] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-08 23:47:55] Running /usr/bin/apptainer --version
[2026-01-08 23:47:55] apptainer version 1.4.5-2.el9
[2026-01-08 23:47:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 23:47:56] c-210-13.aglt2.org
[2026-01-08 23:47:56] apptainer works
[2026-01-08 23:47:56] Set ATHENA_PROC_NUMBER=8
[2026-01-08 23:47:56] Set ATHENA_CORE_NUMBER=8
[2026-01-08 23:47:56] Starting ATLAS job with PandaID=6963162111
[2026-01-08 23:47:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 06:40:17]  *** The last 200 lines of the pilot log: ***
[2026-01-09 06:40:17] 2026-01-09 11:39:12,617 | INFO     | monitor loop #1580: job 0:6963162111 is in state 'finished'
[2026-01-09 06:40:17] 2026-01-09 11:39:12,621 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 06:40:17] 2026-01-09 11:39:12,663 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 06:40:17] 2026-01-09 11:39:12,673 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2600.1781999999994
[2026-01-09 06:40:17] 2026-01-09 11:39:12,690 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6963162111/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 06:40:17] 2026-01-09 11:39:12,690 | INFO     | extracted standard info from prmon json
[2026-01-09 06:40:17] 2026-01-09 11:39:12,691 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 06:40:17] 2026-01-09 11:39:12,691 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 06:40:17] 2026-01-09 11:39:12,691 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 06:40:17] 2026-01-09 11:39:12,691 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 06:40:17] 2026-01-09 11:39:12,706 | INFO     | fitting pss+swap vs Time
[2026-01-09 06:40:17] 2026-01-09 11:39:12,708 | INFO     | sum of square deviations: 20297596948.218365
[2026-01-09 06:40:17] 2026-01-09 11:39:12,716 | INFO     | sum of deviations: 95526162327.16629
[2026-01-09 06:40:17] 2026-01-09 11:39:12,717 | INFO     | mean x: 1767946448.8610423
[2026-01-09 06:40:17] 2026-01-09 11:39:12,717 | INFO     | mean y: 2490048.9851116627
[2026-01-09 06:40:17] 2026-01-09 11:39:12,717 | INFO     | intersect: -8317959898.389626
[2026-01-09 06:40:17] 2026-01-09 11:39:12,719 | INFO     | chi2: 2.249975362574766
[2026-01-09 06:40:17] 2026-01-09 11:39:12,721 | INFO     | sum of square deviations: 19551658397.21856
[2026-01-09 06:40:17] 2026-01-09 11:39:12,729 | INFO     | sum of deviations: 118128494183.7941
[2026-01-09 06:40:17] 2026-01-09 11:39:12,729 | INFO     | mean x: 1767946296.3743718
[2026-01-09 06:40:17] 2026-01-09 11:39:12,730 | INFO     | mean y: 2494619.175879397
[2026-01-09 06:40:17] 2026-01-09 11:39:12,730 | INFO     | intersect: -10679199462.500118
[2026-01-09 06:40:17] 2026-01-09 11:39:12,732 | INFO     | chi2: 1.5632984685791609
[2026-01-09 06:40:17] 2026-01-09 11:39:12,732 | INFO     | current chi2=1.5632984685791609 (change=30.519307251871602 %)
[2026-01-09 06:40:17] 2026-01-09 11:39:12,733 | INFO     | sum of square deviations: 18824207667.847324
[2026-01-09 06:40:17] 2026-01-09 11:39:12,742 | INFO     | sum of deviations: 115748776356.11449
[2026-01-09 06:40:17] 2026-01-09 11:39:12,742 | INFO     | mean x: 1767946143.8854961
[2026-01-09 06:40:17] 2026-01-09 11:39:12,742 | INFO     | mean y: 2494120.3358778628
[2026-01-09 06:40:17] 2026-01-09 11:39:12,743 | INFO     | intersect: -10868486822.346157
[2026-01-09 06:40:17] 2026-01-09 11:39:12,744 | INFO     | chi2: 1.5633934234280822
[2026-01-09 06:40:17] 2026-01-09 11:39:12,745 | INFO     | current chi2=1.5633934234280822 (change=-0.006074006392880588 %)
[2026-01-09 06:40:17] 2026-01-09 11:39:12,745 | INFO     | right removable region: 392
[2026-01-09 06:40:17] 2026-01-09 11:39:12,747 | INFO     | sum of square deviations: 19551125521.67826
[2026-01-09 06:40:17] 2026-01-09 11:39:12,753 | INFO     | sum of deviations: 28789598189.31156
[2026-01-09 06:40:17] 2026-01-09 11:39:12,753 | INFO     | mean x: 1767946601.40201
[2026-01-09 06:40:17] 2026-01-09 11:39:12,753 | INFO     | mean y: 2503618.610552764
[2026-01-09 06:40:17] 2026-01-09 11:39:12,753 | INFO     | intersect: -2600848920.765591
[2026-01-09 06:40:17] 2026-01-09 11:39:12,754 | INFO     | chi2: 0.7491257195877506
[2026-01-09 06:40:17] 2026-01-09 11:39:12,754 | INFO     | current chi2=0.7491257195877506 (change=66.70515899647513 %)
[2026-01-09 06:40:17] 2026-01-09 11:39:12,758 | INFO     | sum of square deviations: 18823191333.654057
[2026-01-09 06:40:17] 2026-01-09 11:39:12,770 | INFO     | sum of deviations: 18798181157.32061
[2026-01-09 06:40:17] 2026-01-09 11:39:12,770 | INFO     | mean x: 1767946753.9414759
[2026-01-09 06:40:17] 2026-01-09 11:39:12,771 | INFO     | mean y: 2505710.2748091603
[2026-01-09 06:40:17] 2026-01-09 11:39:12,771 | INFO     | intersect: -1763091991.4108377
[2026-01-09 06:40:17] 2026-01-09 11:39:12,771 | INFO     | chi2: 0.7318613851809717
[2026-01-09 06:40:17] 2026-01-09 11:39:12,771 | INFO     | current chi2=0.7318613851809717 (change=2.30459774045399 %)
[2026-01-09 06:40:17] 2026-01-09 11:39:12,772 | INFO     | left removable region: 20
[2026-01-09 06:40:17] 2026-01-09 11:39:12,772 | INFO     | sum of square deviations: 15963954597.92476
[2026-01-09 06:40:17] 2026-01-09 11:39:12,778 | INFO     | sum of deviations: 48698464605.95165
[2026-01-09 06:40:17] 2026-01-09 11:39:12,778 | INFO     | mean x: 1767946723.5537634
[2026-01-09 06:40:17] 2026-01-09 11:39:12,779 | INFO     | mean y: 2508257.9274193547
[2026-01-09 06:40:17] 2026-01-09 11:39:12,779 | INFO     | intersect: -5390659858.034477
[2026-01-09 06:40:17] 2026-01-09 11:39:12,780 | INFO     | chi2: 0.004397822808902561
[2026-01-09 06:40:17] 2026-01-09 11:39:12,780 | INFO     | current memory leak: 3.05 B/s (using 372 data points, chi2=0.00)
[2026-01-09 06:40:17] 2026-01-09 11:39:12,782 | INFO     | could have reported an average CPU frequency of 2600 MHz (17 samples)
[2026-01-09 06:40:17] 2026-01-09 11:39:12,783 | INFO     | ..............................
[2026-01-09 06:40:17] 2026-01-09 11:39:12,783 | INFO     | . Timing measurements:
[2026-01-09 06:40:17] 2026-01-09 11:39:12,783 | INFO     | . get job = 0 s
[2026-01-09 06:40:17] 2026-01-09 11:39:12,783 | INFO     | . initial setup = 4 s
[2026-01-09 06:40:17] 2026-01-09 11:39:12,784 | INFO     | . payload setup = 18 s
[2026-01-09 06:40:17] 2026-01-09 11:39:12,784 | INFO     | . stage-in = 0 s
[2026-01-09 06:40:17] 2026-01-09 11:39:12,784 | INFO     | . payload execution = 24542 s
[2026-01-09 06:40:17] 2026-01-09 11:39:12,784 | INFO     | . stage-out = 3 s
[2026-01-09 06:40:17] 2026-01-09 11:39:12,785 | INFO     | . log creation = 0 s
[2026-01-09 06:40:17] 2026-01-09 11:39:12,785 | INFO     | ..............................
[2026-01-09 06:40:17] 2026-01-09 11:39:13,001 | INFO     | 
[2026-01-09 06:40:17] 2026-01-09 11:39:13,001 | INFO     | job summary report
[2026-01-09 06:40:17] 2026-01-09 11:39:13,001 | INFO     | --------------------------------------------------
[2026-01-09 06:40:17] 2026-01-09 11:39:13,001 | INFO     | PanDA job id: 6963162111
[2026-01-09 06:40:17] 2026-01-09 11:39:13,002 | INFO     | task id: 47898826
[2026-01-09 06:40:17] 2026-01-09 11:39:13,002 | INFO     | errors: (none)
[2026-01-09 06:40:17] 2026-01-09 11:39:13,002 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 06:40:17] 2026-01-09 11:39:13,002 | INFO     | pilot state: finished 
[2026-01-09 06:40:17] 2026-01-09 11:39:13,002 | INFO     | transexitcode: 0
[2026-01-09 06:40:17] 2026-01-09 11:39:13,002 | INFO     | exeerrorcode: 0
[2026-01-09 06:40:17] 2026-01-09 11:39:13,002 | INFO     | exeerrordiag: 
[2026-01-09 06:40:17] 2026-01-09 11:39:13,002 | INFO     | exitcode: 0
[2026-01-09 06:40:17] 2026-01-09 11:39:13,002 | INFO     | exitmsg: OK
[2026-01-09 06:40:17] 2026-01-09 11:39:13,003 | INFO     | cpuconsumptiontime: 66121 s
[2026-01-09 06:40:17] 2026-01-09 11:39:13,003 | INFO     | nevents: 400
[2026-01-09 06:40:17] 2026-01-09 11:39:13,003 | INFO     | neventsw: 0
[2026-01-09 06:40:17] 2026-01-09 11:39:13,003 | INFO     | pid: 2595926
[2026-01-09 06:40:17] 2026-01-09 11:39:13,003 | INFO     | pgrp: 2595926
[2026-01-09 06:40:17] 2026-01-09 11:39:13,003 | INFO     | corecount: 8
[2026-01-09 06:40:17] 2026-01-09 11:39:13,003 | INFO     | event service: False
[2026-01-09 06:40:17] 2026-01-09 11:39:13,003 | INFO     | sizes: {0: 2283143, 1: 2283828, 2: 2284027, 3: 2284027, 14: 2284055, 18: 2284345, 25: 2284501, 24565: 2320368, 24569: 2329366, 24570: 2329422, 24606: 2329680}
[2026-01-09 06:40:17] 2026-01-09 11:39:13,003 | INFO     | --------------------------------------------------
[2026-01-09 06:40:17] 2026-01-09 11:39:13,003 | INFO     | 
[2026-01-09 06:40:17] 2026-01-09 11:39:13,004 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-09 06:40:17] 2026-01-09 11:39:13,089 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 06:40:17] 2026-01-09 11:39:13,090 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 06:40:17] 2026-01-09 11:39:13,090 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 06:40:17] 2026-01-09 11:39:13,090 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 06:40:17] 2026-01-09 11:39:13,090 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 06:40:17] 2026-01-09 11:39:13,090 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 06:40:17] 2026-01-09 11:39:13,090 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 06:40:17] 2026-01-09 11:39:13,090 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 06:40:17] 2026-01-09 11:39:13,090 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 06:40:17] 2026-01-09 11:39:13,090 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 06:40:17] 2026-01-09 11:39:13,090 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 06:40:17] 2026-01-09 11:39:13,091 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 06:40:17] 2026-01-09 11:39:13,091 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 06:40:17] 2026-01-09 11:39:13,091 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 06:40:17] 2026-01-09 11:39:13,091 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 06:40:17] 2026-01-09 11:39:13,091 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 06:40:17] 2026-01-09 11:39:13,091 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 06:40:17] 2026-01-09 11:39:13,091 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 06:40:17] 2026-01-09 11:39:13,091 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 06:40:17] 2026-01-09 11:39:13,091 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 06:40:17] 2026-01-09 11:39:13,091 | INFO     | job 6963162111 has completed (purged errors)
[2026-01-09 06:40:17] 2026-01-09 11:39:13,092 | INFO     | overall cleanup function is called
[2026-01-09 06:40:17] 2026-01-09 11:39:14,103 | INFO     | --- collectZombieJob: --- 10, [2595926]
[2026-01-09 06:40:17] 2026-01-09 11:39:14,103 | INFO     | zombie collector waiting for pid 2595926
[2026-01-09 06:40:17] 2026-01-09 11:39:14,103 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 06:40:17] 2026-01-09 11:39:14,104 | INFO     | collected zombie processes
[2026-01-09 06:40:17] 2026-01-09 11:39:14,104 | INFO     | will attempt to kill all subprocesses of pid=2595926
[2026-01-09 06:40:17] 2026-01-09 11:39:14,574 | INFO     | process IDs to be killed: [2595926] (in reverse order)
[2026-01-09 06:40:17] 2026-01-09 11:39:14,724 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 06:40:17] 2026-01-09 11:39:14,724 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 06:40:17] 2026-01-09 11:39:14,739 | INFO     | did not find any defunct processes belonging to 2595926
[2026-01-09 06:40:17] 2026-01-09 11:39:14,750 | INFO     | did not find any defunct processes belonging to 2595926
[2026-01-09 06:40:17] 2026-01-09 11:39:14,750 | INFO     | ready for new job
[2026-01-09 06:40:17] 2026-01-09 11:39:14,754 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 06:40:17] 2026-01-09 11:39:14,757 | INFO     | ***************************************
[2026-01-09 06:40:17] 2026-01-09 11:39:14,757 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 06:40:17] 2026-01-09 11:39:14,757 | INFO     | ***************************************
[2026-01-09 06:40:17] 2026-01-09 11:39:14,757 | INFO     | 
[2026-01-09 06:40:17] 2026-01-09 11:39:14,763 | INFO     | architecture information:
[2026-01-09 06:40:17] 2026-01-09 11:39:14,763 | INFO     | executing command: cat /etc/os-release
[2026-01-09 06:40:17] 2026-01-09 11:39:14,799 | INFO     | cat /etc/os-release:
[2026-01-09 06:40:17] NAME="CentOS Linux"
[2026-01-09 06:40:17] VERSION="7 (Core)"
[2026-01-09 06:40:17] ID="centos"
[2026-01-09 06:40:17] ID_LIKE="rhel fedora"
[2026-01-09 06:40:17] VERSION_ID="7"
[2026-01-09 06:40:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 06:40:17] ANSI_COLOR="0;31"
[2026-01-09 06:40:17] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 06:40:17] HOME_URL="https://www.centos.org/"
[2026-01-09 06:40:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 06:40:17] 
[2026-01-09 06:40:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 06:40:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 06:40:17] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 06:40:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 06:40:17] 
[2026-01-09 06:40:17] 2026-01-09 11:39:14,800 | INFO     | ***************************************
[2026-01-09 06:40:17] 2026-01-09 11:39:15,303 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-09 06:40:17] 2026-01-09 11:39:15,380 | INFO     | sufficient remaining disk space (52776927232 B)
[2026-01-09 06:40:17] 2026-01-09 11:39:15,380 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 06:40:17] 2026-01-09 11:39:15,381 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 06:40:17] 2026-01-09 11:39:15,381 | INFO     | update_server=False
[2026-01-09 06:40:17] 2026-01-09 11:39:15,382 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 06:40:17] 2026-01-09 11:39:15,727 | INFO     | all payload control threads have been joined
[2026-01-09 06:40:17] 2026-01-09 11:39:15,968 | INFO     | all job control threads have been joined
[2026-01-09 06:40:17] 2026-01-09 11:39:16,132 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 06:40:17] 2026-01-09 11:39:16,132 | INFO     | aborting loop
[2026-01-09 06:40:17] 2026-01-09 11:39:16,389 | INFO     | [job] retrieve thread has finished
[2026-01-09 06:40:17] 2026-01-09 11:39:16,483 | INFO     | all data control threads have been joined
[2026-01-09 06:40:17] 2026-01-09 11:39:16,733 | INFO     | [payload] control thread has finished
[2026-01-09 06:40:17] 2026-01-09 11:39:16,828 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 06:40:17] 2026-01-09 11:39:16,891 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 06:40:17] 2026-01-09 11:39:16,974 | INFO     | [job] control thread has finished
[2026-01-09 06:40:17] 2026-01-09 11:39:17,139 | INFO     | [job] job monitor thread has finished
[2026-01-09 06:40:17] 2026-01-09 11:39:17,418 | INFO     | [job] validate thread has finished
[2026-01-09 06:40:17] 2026-01-09 11:39:17,419 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 06:40:17] 2026-01-09 11:39:17,438 | INFO     | [data] copytool_in thread has finished
[2026-01-09 06:40:17] 2026-01-09 11:39:17,489 | INFO     | [data] control thread has finished
[2026-01-09 06:40:17] 2026-01-09 11:39:17,565 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 06:40:17] 2026-01-09 11:39:17,644 | INFO     | [payload] failed_post thread has finished
[2026-01-09 06:40:17] 2026-01-09 11:39:17,671 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 06:40:17] 2026-01-09 11:39:17,707 | INFO     | [payload] validate_post thread has finished
[2026-01-09 06:40:17] 2026-01-09 11:39:18,029 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 06:40:17] 2026-01-09 11:39:18,524 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 06:40:17] 2026-01-09 11:39:18,856 | INFO     | [data] copytool_out thread has finished
[2026-01-09 06:40:17] 2026-01-09 11:39:19,034 | INFO     | [job] queue monitor thread has finished
[2026-01-09 06:40:17] 2026-01-09 11:39:22,538 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 06:40:17] 2026-01-09 11:39:46,498 | INFO     | PID=2588889 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 06:40:17] 2026-01-09 11:39:46,498 | INFO     | .. there are 8 such processes running
[2026-01-09 06:40:17] 2026-01-09 11:39:46,526 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 06:40:17] 2026-01-09 11:39:46,526 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 06:40:17] 2026-01-09 11:39:46,526 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 06:40:17] 2026-01-09 11:40:11,299 | INFO     | [monitor] cgroup control has ended
[2026-01-09 06:40:17] 2026-01-09 11:40:11,918 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140301899343680)>', '<ExcThread(monitor, started 140301626742528)>']
[2026-01-09 06:40:17] 2026-01-09 11:40:12,726 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 06:40:17] 2026-01-09 11:40:12,726 | INFO     | [monitor] control thread has ended
[2026-01-09 06:40:17] 2026-01-09 11:40:16,944 | INFO     | all workflow threads have been joined
[2026-01-09 06:40:17] 2026-01-09 11:40:16,944 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 06:40:17] 2026-01-09 11:40:16,945 | INFO     | traces error code: 0
[2026-01-09 06:40:17] 2026-01-09 11:40:16,945 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 06:40:17] 2026-01-09 11:40:17,184 [wrapper] ==== pilot stdout END ====
[2026-01-09 06:40:17] 2026-01-09 11:40:17,205 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 06:40:17] 2026-01-09 11:40:17,217 [wrapper] pilotpid: 2588889
[2026-01-09 06:40:17] 2026-01-09 11:40:17,244 [wrapper] Pilot exit status: 0
[2026-01-09 06:40:17] 2026-01-09 11:40:17,332 [wrapper] pandaids: 6963162111
[2026-01-09 06:40:17] 2026-01-09 11:40:17,520 [wrapper] cleanup supervisor_pilot 3302060 2588890
[2026-01-09 06:40:17] 2026-01-09 11:40:17,546 [wrapper] Test setup, not cleaning
[2026-01-09 06:40:17] 2026-01-09 11:40:17,565 [wrapper] apfmon messages muted
[2026-01-09 06:40:17] 2026-01-09 11:40:17,579 [wrapper] ==== wrapper stdout END ====
[2026-01-09 06:40:17] 2026-01-09 11:40:17,602 [wrapper] ==== wrapper stderr END ====
[2026-01-09 06:40:17]  *** Error codes and diagnostics ***
[2026-01-09 06:40:17]     "exeErrorCode": 0,
[2026-01-09 06:40:17]     "exeErrorDiag": "",
[2026-01-09 06:40:17]     "pilotErrorCode": 0,
[2026-01-09 06:40:17]     "pilotErrorDiag": "",
[2026-01-09 06:40:17]  *** Listing of results directory ***
[2026-01-09 06:40:17] total 439688
[2026-01-09 06:40:17] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 16:44 pilot3.tar.gz
[2026-01-09 06:40:17] -rwx------. 1 boincer umatlas     36322 Jan  8 16:49 runpilot2-wrapper.sh
[2026-01-09 06:40:17] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 16:51 queuedata.json
[2026-01-09 06:40:17] -rw-r--r--. 1 boincer umatlas       100 Jan  8 23:47 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 06:40:17] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  8 23:47 run_atlas
[2026-01-09 06:40:17] -rw-r--r--. 1 boincer umatlas       105 Jan  8 23:47 job.xml
[2026-01-09 06:40:17] -rw-r--r--. 2 boincer umatlas 224920926 Jan  8 23:47 EVNT.47898824._001238.pool.root.1
[2026-01-09 06:40:17] -rw-r--r--. 2 boincer umatlas     15847 Jan  8 23:47 start_atlas.sh
[2026-01-09 06:40:17] drwxrwx--x. 2 boincer umatlas      4096 Jan  8 23:47 shared
[2026-01-09 06:40:17] -rw-r--r--. 2 boincer umatlas    592402 Jan  8 23:47 input.tar.gz
[2026-01-09 06:40:17] -rw-r--r--. 1 boincer umatlas         0 Jan  8 23:47 boinc_lockfile
[2026-01-09 06:40:17] -rw-r--r--. 1 boincer umatlas      2520 Jan  8 23:47 pandaJob.out
[2026-01-09 06:40:17] -rw-------. 1 boincer umatlas        57 Jan  8 23:47 setup.sh.local
[2026-01-09 06:40:17] -rw-------. 1 boincer umatlas    989771 Jan  8 23:48 agis_schedconf.cvmfs.json
[2026-01-09 06:40:17] drwx------. 5 boincer umatlas      4096 Jan  8 23:48 pilot3
[2026-01-09 06:40:17] -rw-------. 1 boincer umatlas 213760156 Jan  9 06:37 HITS.47898826._033738.pool.root.1
[2026-01-09 06:40:17] -rw-r--r--. 1 boincer umatlas       531 Jan  9 06:37 boinc_task_state.xml
[2026-01-09 06:40:17] -rw-r--r--. 1 boincer umatlas      6658 Jan  9 06:38 init_data.xml
[2026-01-09 06:40:17] -rw-------. 1 boincer umatlas      1039 Jan  9 06:38 memory_monitor_summary.json
[2026-01-09 06:40:17] -rw-------. 1 boincer umatlas   1516240 Jan  9 06:38 agis_ddmendpoints.agis.ALL.json
[2026-01-09 06:40:17] -rw-------. 1 boincer umatlas    602828 Jan  9 06:38 log.47898826._033738.job.log.tgz.1
[2026-01-09 06:40:17] -rw-------. 1 boincer umatlas      7819 Jan  9 06:39 heartbeat.json
[2026-01-09 06:40:17] -rw-------. 1 boincer umatlas        95 Jan  9 06:39 pilot_heartbeat.json
[2026-01-09 06:40:17] -rw-r--r--. 1 boincer umatlas      8192 Jan  9 06:40 boinc_mmap_file
[2026-01-09 06:40:17] -rw-r--r--. 1 boincer umatlas        28 Jan  9 06:40 wrapper_checkpoint.txt
[2026-01-09 06:40:17] -rw-------. 1 boincer umatlas      4823 Jan  9 06:40 pilotlog.txt
[2026-01-09 06:40:17] -rw-------. 1 boincer umatlas   3219348 Jan  9 06:40 log.47898826._033738.job.log.1
[2026-01-09 06:40:17] -rw-------. 1 boincer umatlas       357 Jan  9 06:40 output.list
[2026-01-09 06:40:17] -rw-r--r--. 1 boincer umatlas       620 Jan  9 06:40 runtime_log
[2026-01-09 06:40:17] -rw-------. 1 boincer umatlas   3840000 Jan  9 06:40 result.tar.gz
[2026-01-09 06:40:17] -rw-r--r--. 1 boincer umatlas      9343 Jan  9 06:40 runtime_log.err
[2026-01-09 06:40:17] -rw-------. 1 boincer umatlas       656 Jan  9 06:40 8cTNDml3Cy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmBelKDmsxfoGo.diag
[2026-01-09 06:40:17] -rw-r--r--. 1 boincer umatlas     21239 Jan  9 06:40 stderr.txt
[2026-01-09 06:40:18] HITS file was successfully produced:
[2026-01-09 06:40:18] -rw-------. 1 boincer umatlas 213760156 Jan  9 06:37 shared/HITS.pool.root.1
[2026-01-09 06:40:18]  *** Contents of shared directory: ***
[2026-01-09 06:40:18] total 432756
[2026-01-09 06:40:18] -rw-r--r--. 2 boincer umatlas 224920926 Jan  8 23:47 ATLAS.root_0
[2026-01-09 06:40:18] -rw-r--r--. 2 boincer umatlas     15847 Jan  8 23:47 start_atlas.sh
[2026-01-09 06:40:18] -rw-r--r--. 2 boincer umatlas    592402 Jan  8 23:47 input.tar.gz
[2026-01-09 06:40:18] -rw-------. 1 boincer umatlas 213760156 Jan  9 06:37 HITS.pool.root.1
[2026-01-09 06:40:18] -rw-------. 1 boincer umatlas   3840000 Jan  9 06:40 result.tar.gz
06:40:19 (2583796): run_atlas exited; CPU time 66643.283549
06:40:19 (2583796): called boinc_finish(0)

</stderr_txt>
]]>

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