Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:29:14 (15307): wrapper (7.7.26015): starting
08:29:14 (15307): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 08:29:14] Arguments: --nthreads 8
[2026-01-09 08:29:14] Threads: 8
[2026-01-09 08:29:14] Checking for CVMFS
[2026-01-09 08:29:14] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 08:29:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 08:29:14] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 08:29:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 08:29:14] 2.11.2.0 2053 35107 99392 154936 3 56 24296811 25165824 0 130560 0 7096200 99.668 9371616 4143 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-09 08:29:14] CVMFS is ok
[2026-01-09 08:29:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 08:29:14] Checking for apptainer binary...
[2026-01-09 08:29:14] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 08:29:14] Running /usr/bin/apptainer --version
[2026-01-09 08:29:14] apptainer version 1.3.2-1.el7
[2026-01-09 08:29:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 08:29:16] cg-vwn436.simple-grid.lan
[2026-01-09 08:29:16] apptainer works
[2026-01-09 08:29:16] Set ATHENA_PROC_NUMBER=8
[2026-01-09 08:29:16] Set ATHENA_CORE_NUMBER=8
[2026-01-09 08:29:16] Starting ATLAS job with PandaID=6963162012
[2026-01-09 08:29:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 11:19:53]  *** The last 200 lines of the pilot log: ***
[2026-01-09 11:19:53] 2026-01-09 10:19:12,196 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 11:19:53] 2026-01-09 10:19:13,120 | INFO     | time since job start (10183s) is within the limit (349056.0s)
[2026-01-09 11:19:53] 2026-01-09 10:19:13,657 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 11:19:53] 2026-01-09 10:19:13,658 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2026-01-09 11:19:53] 2026-01-09 10:19:13,660 | INFO     | using path: /var/lib/boinc/slots/8/PanDA_Pilot-6963162012/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 11:19:53] 2026-01-09 10:19:13,661 | INFO     | extracted standard info from prmon json
[2026-01-09 11:19:53] 2026-01-09 10:19:13,661 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 11:19:53] 2026-01-09 10:19:13,661 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 11:19:53] 2026-01-09 10:19:13,661 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 11:19:53] 2026-01-09 10:19:13,662 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 11:19:53] 2026-01-09 10:19:13,666 | INFO     | fitting pss+swap vs Time
[2026-01-09 11:19:53] 2026-01-09 10:19:13,666 | INFO     | sum of square deviations: 1444149868.0
[2026-01-09 11:19:53] 2026-01-09 10:19:13,667 | INFO     | sum of deviations: -16788695903.0
[2026-01-09 11:19:53] 2026-01-09 10:19:13,668 | INFO     | mean x: 1767948863.0
[2026-01-09 11:19:53] 2026-01-09 10:19:13,668 | INFO     | mean y: 2524699.239520958
[2026-01-09 11:19:53] 2026-01-09 10:19:13,668 | INFO     | intersect: 20555485642.321922
[2026-01-09 11:19:53] 2026-01-09 10:19:13,668 | INFO     | chi2: 2.461874674033723
[2026-01-09 11:19:53] 2026-01-09 10:19:13,669 | INFO     | sum of square deviations: 1318277740.5
[2026-01-09 11:19:53] 2026-01-09 10:19:13,670 | INFO     | sum of deviations: -5050045003.000006
[2026-01-09 11:19:53] 2026-01-09 10:19:13,670 | INFO     | mean x: 1767948710.5
[2026-01-09 11:19:53] 2026-01-09 10:19:13,670 | INFO     | mean y: 2538596.5555555555
[2026-01-09 11:19:53] 2026-01-09 10:19:13,670 | INFO     | intersect: 6775178592.4599905
[2026-01-09 11:19:53] 2026-01-09 10:19:13,670 | INFO     | chi2: 1.7032339628430269
[2026-01-09 11:19:53] 2026-01-09 10:19:13,671 | INFO     | current chi2=1.7032339628430269 (change=30.815569906638725 %)
[2026-01-09 11:19:53] 2026-01-09 10:19:13,671 | INFO     | sum of square deviations: 1199940638.0
[2026-01-09 11:19:53] 2026-01-09 10:19:13,672 | INFO     | sum of deviations: -4532229606.000003
[2026-01-09 11:19:53] 2026-01-09 10:19:13,672 | INFO     | mean x: 1767948558.0
[2026-01-09 11:19:53] 2026-01-09 10:19:13,672 | INFO     | mean y: 2539262.6369426753
[2026-01-09 11:19:53] 2026-01-09 10:19:13,673 | INFO     | intersect: 6680160257.128683
[2026-01-09 11:19:53] 2026-01-09 10:19:13,673 | INFO     | chi2: 1.7034293205303577
[2026-01-09 11:19:53] 2026-01-09 10:19:13,673 | INFO     | current chi2=1.7034293205303577 (change=-0.011469809291773441 %)
[2026-01-09 11:19:53] 2026-01-09 10:19:13,673 | INFO     | right removable region: 156
[2026-01-09 11:19:53] 2026-01-09 10:19:13,674 | INFO     | sum of square deviations: 1318277740.5
[2026-01-09 11:19:53] 2026-01-09 10:19:13,675 | INFO     | sum of deviations: -42323742514.499985
[2026-01-09 11:19:53] 2026-01-09 10:19:13,675 | INFO     | mean x: 1767949015.5
[2026-01-09 11:19:53] 2026-01-09 10:19:13,675 | INFO     | mean y: 2555208.783950617
[2026-01-09 11:19:53] 2026-01-09 10:19:13,675 | INFO     | intersect: 56763142611.56104
[2026-01-09 11:19:53] 2026-01-09 10:19:13,675 | INFO     | chi2: 0.974865398484574
[2026-01-09 11:19:53] 2026-01-09 10:19:13,676 | INFO     | current chi2=0.974865398484574 (change=60.40150179995636 %)
[2026-01-09 11:19:53] 2026-01-09 10:19:13,676 | INFO     | sum of square deviations: 1199940638.0
[2026-01-09 11:19:53] 2026-01-09 10:19:13,677 | INFO     | sum of deviations: -42899317378.0
[2026-01-09 11:19:53] 2026-01-09 10:19:13,677 | INFO     | mean x: 1767949168.0
[2026-01-09 11:19:53] 2026-01-09 10:19:13,677 | INFO     | mean y: 2555883.687898089
[2026-01-09 11:19:53] 2026-01-09 10:19:13,677 | INFO     | intersect: 63208859649.36055
[2026-01-09 11:19:53] 2026-01-09 10:19:13,678 | INFO     | chi2: 0.945056929768374
[2026-01-09 11:19:53] 2026-01-09 10:19:13,678 | INFO     | current chi2=0.945056929768374 (change=3.0577009669783353 %)
[2026-01-09 11:19:53] 2026-01-09 10:19:13,678 | INFO     | left removable region: 20
[2026-01-09 11:19:53] 2026-01-09 10:19:13,678 | INFO     | sum of square deviations: 779958810.0
[2026-01-09 11:19:53] 2026-01-09 10:19:13,679 | INFO     | sum of deviations: -21221409926.0
[2026-01-09 11:19:53] 2026-01-09 10:19:13,679 | INFO     | mean x: 1767949137.5
[2026-01-09 11:19:53] 2026-01-09 10:19:13,680 | INFO     | mean y: 2560037.6764705884
[2026-01-09 11:19:53] 2026-01-09 10:19:13,680 | INFO     | intersect: 48105578933.25845
[2026-01-09 11:19:53] 2026-01-09 10:19:13,680 | INFO     | chi2: 0.1402053958476786
[2026-01-09 11:19:53] 2026-01-09 10:19:13,680 | INFO     | current memory leak: -27.21 B/s (using 136 data points, chi2=0.14)
[2026-01-09 11:19:53] 2026-01-09 10:19:13,681 | INFO     | could have reported an average CPU frequency of 1999 MHz (9 samples)
[2026-01-09 11:19:53] 2026-01-09 10:19:13,681 | INFO     | ..............................
[2026-01-09 11:19:53] 2026-01-09 10:19:13,681 | INFO     | . Timing measurements:
[2026-01-09 11:19:53] 2026-01-09 10:19:13,681 | INFO     | . get job = 0 s
[2026-01-09 11:19:53] 2026-01-09 10:19:13,681 | INFO     | . initial setup = 1 s
[2026-01-09 11:19:53] 2026-01-09 10:19:13,681 | INFO     | . payload setup = 6 s
[2026-01-09 11:19:53] 2026-01-09 10:19:13,681 | INFO     | . stage-in = 0 s
[2026-01-09 11:19:53] 2026-01-09 10:19:13,682 | INFO     | . payload execution = 10148 s
[2026-01-09 11:19:53] 2026-01-09 10:19:13,682 | INFO     | . stage-out = 1 s
[2026-01-09 11:19:53] 2026-01-09 10:19:13,682 | INFO     | . log creation = 0 s
[2026-01-09 11:19:53] 2026-01-09 10:19:13,682 | INFO     | ..............................
[2026-01-09 11:19:53] 2026-01-09 10:19:13,800 | INFO     | 
[2026-01-09 11:19:53] 2026-01-09 10:19:13,800 | INFO     | job summary report
[2026-01-09 11:19:53] 2026-01-09 10:19:13,801 | INFO     | --------------------------------------------------
[2026-01-09 11:19:53] 2026-01-09 10:19:13,801 | INFO     | PanDA job id: 6963162012
[2026-01-09 11:19:53] 2026-01-09 10:19:13,801 | INFO     | task id: 47898826
[2026-01-09 11:19:53] 2026-01-09 10:19:13,801 | INFO     | errors: (none)
[2026-01-09 11:19:53] 2026-01-09 10:19:13,801 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 11:19:53] 2026-01-09 10:19:13,801 | INFO     | pilot state: finished 
[2026-01-09 11:19:53] 2026-01-09 10:19:13,801 | INFO     | transexitcode: 0
[2026-01-09 11:19:53] 2026-01-09 10:19:13,801 | INFO     | exeerrorcode: 0
[2026-01-09 11:19:53] 2026-01-09 10:19:13,802 | INFO     | exeerrordiag: 
[2026-01-09 11:19:53] 2026-01-09 10:19:13,802 | INFO     | exitcode: 0
[2026-01-09 11:19:53] 2026-01-09 10:19:13,802 | INFO     | exitmsg: OK
[2026-01-09 11:19:53] 2026-01-09 10:19:13,802 | INFO     | cpuconsumptiontime: 75604 s
[2026-01-09 11:19:53] 2026-01-09 10:19:13,802 | INFO     | nevents: 400
[2026-01-09 11:19:53] 2026-01-09 10:19:13,802 | INFO     | neventsw: 0
[2026-01-09 11:19:53] 2026-01-09 10:19:13,802 | INFO     | pid: 25483
[2026-01-09 11:19:53] 2026-01-09 10:19:13,802 | INFO     | pgrp: 25483
[2026-01-09 11:19:53] 2026-01-09 10:19:13,802 | INFO     | corecount: 8
[2026-01-09 11:19:53] 2026-01-09 10:19:13,803 | INFO     | event service: False
[2026-01-09 11:19:53] 2026-01-09 10:19:13,803 | INFO     | sizes: {0: 2283971, 5: 2284233, 11: 2284289, 10158: 2312716, 10159: 2321770, 10167: 2321972}
[2026-01-09 11:19:53] 2026-01-09 10:19:13,803 | INFO     | --------------------------------------------------
[2026-01-09 11:19:53] 2026-01-09 10:19:13,803 | INFO     | 
[2026-01-09 11:19:53] 2026-01-09 10:19:13,803 | INFO     | executing command: ls -lF /var/lib/boinc/slots/8
[2026-01-09 11:19:53] 2026-01-09 10:19:13,827 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 11:19:53] 2026-01-09 10:19:13,827 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 11:19:53] 2026-01-09 10:19:13,827 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 11:19:53] 2026-01-09 10:19:13,827 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 11:19:53] 2026-01-09 10:19:13,827 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 11:19:53] 2026-01-09 10:19:13,827 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 11:19:53] 2026-01-09 10:19:13,828 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 11:19:53] 2026-01-09 10:19:13,828 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 11:19:53] 2026-01-09 10:19:13,828 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 11:19:53] 2026-01-09 10:19:13,828 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 11:19:53] 2026-01-09 10:19:13,828 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 11:19:53] 2026-01-09 10:19:13,828 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 11:19:53] 2026-01-09 10:19:13,828 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 11:19:53] 2026-01-09 10:19:13,828 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 11:19:53] 2026-01-09 10:19:13,829 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 11:19:53] 2026-01-09 10:19:13,829 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 11:19:53] 2026-01-09 10:19:13,829 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 11:19:53] 2026-01-09 10:19:13,829 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 11:19:53] 2026-01-09 10:19:13,829 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 11:19:53] 2026-01-09 10:19:13,829 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 11:19:53] 2026-01-09 10:19:13,830 | INFO     | job 6963162012 has completed (purged errors)
[2026-01-09 11:19:53] 2026-01-09 10:19:13,830 | INFO     | overall cleanup function is called
[2026-01-09 11:19:53] 2026-01-09 10:19:14,838 | INFO     | --- collectZombieJob: --- 10, [25483]
[2026-01-09 11:19:53] 2026-01-09 10:19:14,838 | INFO     | zombie collector waiting for pid 25483
[2026-01-09 11:19:53] 2026-01-09 10:19:14,839 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 11:19:53] 2026-01-09 10:19:14,839 | INFO     | collected zombie processes
[2026-01-09 11:19:53] 2026-01-09 10:19:14,839 | INFO     | will attempt to kill all subprocesses of pid=25483
[2026-01-09 11:19:53] 2026-01-09 10:19:14,907 | INFO     | process IDs to be killed: [25483] (in reverse order)
[2026-01-09 11:19:53] 2026-01-09 10:19:14,967 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 11:19:53] 2026-01-09 10:19:14,968 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 11:19:53] 2026-01-09 10:19:14,970 | INFO     | did not find any defunct processes belonging to 25483
[2026-01-09 11:19:53] 2026-01-09 10:19:14,972 | INFO     | did not find any defunct processes belonging to 25483
[2026-01-09 11:19:53] 2026-01-09 10:19:14,972 | INFO     | ready for new job
[2026-01-09 11:19:53] 2026-01-09 10:19:14,972 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 11:19:53] 2026-01-09 10:19:14,974 | INFO     | ***************************************
[2026-01-09 11:19:53] 2026-01-09 10:19:14,974 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 11:19:53] 2026-01-09 10:19:14,974 | INFO     | ***************************************
[2026-01-09 11:19:53] 2026-01-09 10:19:14,974 | INFO     | 
[2026-01-09 11:19:53] 2026-01-09 10:19:14,975 | INFO     | pilot is running in a VM
[2026-01-09 11:19:53] 2026-01-09 10:19:14,975 | INFO     | architecture information:
[2026-01-09 11:19:53] 2026-01-09 10:19:14,975 | INFO     | executing command: cat /etc/os-release
[2026-01-09 11:19:53] 2026-01-09 10:19:14,998 | INFO     | cat /etc/os-release:
[2026-01-09 11:19:53] NAME="CentOS Linux"
[2026-01-09 11:19:53] VERSION="7 (Core)"
[2026-01-09 11:19:53] ID="centos"
[2026-01-09 11:19:53] ID_LIKE="rhel fedora"
[2026-01-09 11:19:53] VERSION_ID="7"
[2026-01-09 11:19:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 11:19:53] ANSI_COLOR="0;31"
[2026-01-09 11:19:53] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 11:19:53] HOME_URL="https://www.centos.org/"
[2026-01-09 11:19:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 11:19:53] 
[2026-01-09 11:19:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 11:19:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 11:19:53] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 11:19:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 11:19:53] 
[2026-01-09 11:19:53] 2026-01-09 10:19:14,998 | INFO     | ***************************************
[2026-01-09 11:19:53] 2026-01-09 10:19:15,501 | INFO     | executing command: df -mP /var/lib/boinc/slots/8
[2026-01-09 11:19:53] 2026-01-09 10:19:15,533 | INFO     | sufficient remaining disk space (498138611712 B)
[2026-01-09 11:19:53] 2026-01-09 10:19:15,534 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 11:19:53] 2026-01-09 10:19:15,534 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 11:19:53] 2026-01-09 10:19:15,534 | INFO     | update_server=False
[2026-01-09 11:19:53] 2026-01-09 10:19:15,534 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 11:19:53] 2026-01-09 10:19:15,534 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 11:19:53] 2026-01-09 10:19:15,704 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 11:19:53] 2026-01-09 10:19:15,704 | INFO     | aborting loop
[2026-01-09 11:19:53] 2026-01-09 10:19:15,831 | INFO     | all data control threads have been joined
[2026-01-09 11:19:53] 2026-01-09 10:19:16,178 | INFO     | all job control threads have been joined
[2026-01-09 11:19:53] 2026-01-09 10:19:16,541 | INFO     | [job] retrieve thread has finished
[2026-01-09 11:19:53] 2026-01-09 10:19:16,542 | INFO     | [job] queue monitor thread has finished
[2026-01-09 11:19:53] 2026-01-09 10:19:16,675 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 11:19:53] 2026-01-09 10:19:16,710 | INFO     | [job] job monitor thread has finished
[2026-01-09 11:19:53] 2026-01-09 10:19:16,837 | INFO     | [data] control thread has finished
[2026-01-09 11:19:53] 2026-01-09 10:19:16,870 | INFO     | all payload control threads have been joined
[2026-01-09 11:19:53] 2026-01-09 10:19:16,967 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 11:19:53] 2026-01-09 10:19:17,116 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 11:19:53] 2026-01-09 10:19:17,159 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 11:19:53] 2026-01-09 10:19:17,162 | INFO     | [data] copytool_in thread has finished
[2026-01-09 11:19:53] 2026-01-09 10:19:17,183 | INFO     | [job] control thread has finished
[2026-01-09 11:19:53] 2026-01-09 10:19:17,333 | INFO     | [job] validate thread has finished
[2026-01-09 11:19:53] 2026-01-09 10:19:17,527 | INFO     | [payload] validate_post thread has finished
[2026-01-09 11:19:53] 2026-01-09 10:19:17,530 | INFO     | [payload] failed_post thread has finished
[2026-01-09 11:19:53] 2026-01-09 10:19:17,551 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 11:19:53] 2026-01-09 10:19:17,554 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 11:19:53] 2026-01-09 10:19:17,875 | INFO     | [payload] control thread has finished
[2026-01-09 11:19:53] 2026-01-09 10:19:18,973 | INFO     | [data] copytool_out thread has finished
[2026-01-09 11:19:53] 2026-01-09 10:19:21,123 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 11:19:53] 2026-01-09 10:19:46,216 | INFO     | PID=19054 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-09 11:19:53] 2026-01-09 10:19:46,217 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 11:19:53] 2026-01-09 10:19:46,217 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 11:19:53] 2026-01-09 10:19:46,218 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 11:19:53] 2026-01-09 10:19:47,192 | INFO     | [monitor] cgroup control has ended
[2026-01-09 11:19:53] 2026-01-09 10:19:48,382 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139838425794368)>', '<ExcThread(monitor, started 139837550094080)>']
[2026-01-09 11:19:53] 2026-01-09 10:19:49,233 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 11:19:53] 2026-01-09 10:19:49,233 | INFO     | [monitor] control thread has ended
[2026-01-09 11:19:53] 2026-01-09 10:19:53,386 | INFO     | all workflow threads have been joined
[2026-01-09 11:19:53] 2026-01-09 10:19:53,387 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 11:19:53] 2026-01-09 10:19:53,387 | INFO     | traces error code: 0
[2026-01-09 11:19:53] 2026-01-09 10:19:53,387 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 11:19:53] 2026-01-09 10:19:53,543 [wrapper] ==== pilot stdout END ====
[2026-01-09 11:19:53] 2026-01-09 10:19:53,548 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 11:19:53] 2026-01-09 10:19:53,562 [wrapper] pilotpid: 19054
[2026-01-09 11:19:53] 2026-01-09 10:19:53,572 [wrapper] Pilot exit status: 0
[2026-01-09 11:19:53] 2026-01-09 10:19:53,605 [wrapper] pandaids: 6963162012
[2026-01-09 11:19:53] 2026-01-09 10:19:53,705 [wrapper] cleanup supervisor_pilot 11986 19055
[2026-01-09 11:19:53] 2026-01-09 10:19:53,709 [wrapper] Test setup, not cleaning
[2026-01-09 11:19:53] 2026-01-09 10:19:53,715 [wrapper] apfmon messages muted
[2026-01-09 11:19:53] 2026-01-09 10:19:53,719 [wrapper] ==== wrapper stdout END ====
[2026-01-09 11:19:53] 2026-01-09 10:19:53,724 [wrapper] ==== wrapper stderr END ====
[2026-01-09 11:19:53]  *** Error codes and diagnostics ***
[2026-01-09 11:19:53]     "exeErrorCode": 0,
[2026-01-09 11:19:53]     "exeErrorDiag": "",
[2026-01-09 11:19:53]     "pilotErrorCode": 0,
[2026-01-09 11:19:53]     "pilotErrorDiag": "",
[2026-01-09 11:19:53]  *** Listing of results directory ***
[2026-01-09 11:19:53] total 445688
[2026-01-09 11:19:53] -rw-r--r--. 1 boinc boinc    579449 Jan  8 22:44 pilot3.tar.gz
[2026-01-09 11:19:53] -rwx------. 1 boinc boinc     36322 Jan  8 22:49 runpilot2-wrapper.sh
[2026-01-09 11:19:53] -rw-r--r--. 1 boinc boinc      5112 Jan  8 22:51 queuedata.json
[2026-01-09 11:19:53] -rw-r--r--. 1 boinc boinc       100 Jan  9 08:29 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 11:19:53] -rwxr-xr-x. 1 boinc boinc      7986 Jan  9 08:29 run_atlas
[2026-01-09 11:19:53] -rw-r--r--. 1 boinc boinc       105 Jan  9 08:29 job.xml
[2026-01-09 11:19:53] -rw-r--r--. 2 boinc boinc 225581833 Jan  9 08:29 EVNT.47898824._001234.pool.root.1
[2026-01-09 11:19:53] -rw-r--r--. 2 boinc boinc     15847 Jan  9 08:29 start_atlas.sh
[2026-01-09 11:19:53] drwxrwx--x. 2 boinc boinc        68 Jan  9 08:29 shared
[2026-01-09 11:19:53] -rw-r--r--. 2 boinc boinc    592403 Jan  9 08:29 input.tar.gz
[2026-01-09 11:19:53] -rw-r--r--. 1 boinc boinc      6388 Jan  9 08:29 init_data.xml
[2026-01-09 11:19:53] -rw-r--r--. 1 boinc boinc         0 Jan  9 08:29 boinc_lockfile
[2026-01-09 11:19:53] -rw-r--r--. 1 boinc boinc      2520 Jan  9 08:29 pandaJob.out
[2026-01-09 11:19:53] -rw-------. 1 boinc boinc    989771 Jan  9 08:29 agis_schedconf.cvmfs.json
[2026-01-09 11:19:53] -rw-------. 1 boinc boinc   1516240 Jan  9 08:29 agis_ddmendpoints.agis.ALL.json
[2026-01-09 11:19:53] drwx------. 5 boinc boinc      4096 Jan  9 08:29 pilot3
[2026-01-09 11:19:53] -rw-------. 1 boinc boinc 223358775 Jan  9 11:18 HITS.47898826._033639.pool.root.1
[2026-01-09 11:19:53] -rw-r--r--. 1 boinc boinc       531 Jan  9 11:18 boinc_task_state.xml
[2026-01-09 11:19:53] -rw-------. 1 boinc boinc      1016 Jan  9 11:19 memory_monitor_summary.json
[2026-01-09 11:19:53] -rw-------. 1 boinc boinc    403435 Jan  9 11:19 log.47898826._033639.job.log.tgz.1
[2026-01-09 11:19:53] -rw-------. 1 boinc boinc      7782 Jan  9 11:19 heartbeat.json
[2026-01-09 11:19:53] -rw-r--r--. 1 boinc boinc        28 Jan  9 11:19 wrapper_checkpoint.txt
[2026-01-09 11:19:53] -rw-r--r--. 1 boinc boinc      8192 Jan  9 11:19 boinc_mmap_file
[2026-01-09 11:19:53] -rw-------. 1 boinc boinc        95 Jan  9 11:19 pilot_heartbeat.json
[2026-01-09 11:19:53] -rw-------. 1 boinc boinc      4809 Jan  9 11:19 pilotlog.txt
[2026-01-09 11:19:53] -rw-------. 1 boinc boinc   1369805 Jan  9 11:19 log.47898826._033639.job.log.1
[2026-01-09 11:19:53] -rw-------. 1 boinc boinc       357 Jan  9 11:19 output.list
[2026-01-09 11:19:53] -rw-r--r--. 1 boinc boinc       620 Jan  9 11:19 runtime_log
[2026-01-09 11:19:53] -rw-------. 1 boinc boinc   1792000 Jan  9 11:19 result.tar.gz
[2026-01-09 11:19:53] -rw-r--r--. 1 boinc boinc      8817 Jan  9 11:19 runtime_log.err
[2026-01-09 11:19:53] -rw-------. 1 boinc boinc       655 Jan  9 11:19 LSAMDml3Cy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmMdlKDmuVHLPn.diag
[2026-01-09 11:19:53] -rw-r--r--. 1 boinc boinc     20733 Jan  9 11:19 stderr.txt
[2026-01-09 11:19:53] HITS file was successfully produced:
[2026-01-09 11:19:53] -rw-------. 1 boinc boinc 223358775 Jan  9 11:18 shared/HITS.pool.root.1
[2026-01-09 11:19:53]  *** Contents of shared directory: ***
[2026-01-09 11:19:53] total 440768
[2026-01-09 11:19:53] -rw-r--r--. 2 boinc boinc 225581833 Jan  9 08:29 ATLAS.root_0
[2026-01-09 11:19:53] -rw-r--r--. 2 boinc boinc     15847 Jan  9 08:29 start_atlas.sh
[2026-01-09 11:19:53] -rw-r--r--. 2 boinc boinc    592403 Jan  9 08:29 input.tar.gz
[2026-01-09 11:19:53] -rw-------. 1 boinc boinc 223358775 Jan  9 11:18 HITS.pool.root.1
[2026-01-09 11:19:53] -rw-------. 1 boinc boinc   1792000 Jan  9 11:19 result.tar.gz
11:19:55 (15307): run_atlas exited; CPU time 75678.529892
11:19:55 (15307): called boinc_finish(0)

</stderr_txt>
]]>

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