Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
23:32:59 (741): wrapper (7.7.26015): starting
23:32:59 (741): wrapper: running run_atlas (--nthreads 8)
[2026-01-08 23:32:59] Arguments: --nthreads 8
[2026-01-08 23:32:59] Threads: 8
[2026-01-08 23:32:59] Checking for CVMFS
[2026-01-08 23:32:59] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 23:33:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 23:33:00] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 23:33:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 23:33:00] 2.11.2.0 2888 111749 110020 154931 2 57 19053983 20275201 1 130560 0 23248943 99.769 7635605 32369 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-08 23:33:00] CVMFS is ok
[2026-01-08 23:33:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-08 23:33:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-08 23:33:00] Further information can be found at the LHC@home message board.
[2026-01-08 23:33:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 23:33:00] Checking for apptainer binary...
[2026-01-08 23:33:00] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-08 23:33:00] Running /usr/bin/apptainer --version
[2026-01-08 23:33:00] apptainer version 1.3.2-1.el7
[2026-01-08 23:33:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 23:33:01] c-204-6.aglt2.org
[2026-01-08 23:33:01] apptainer works
[2026-01-08 23:33:01] Set ATHENA_PROC_NUMBER=8
[2026-01-08 23:33:01] Set ATHENA_CORE_NUMBER=8
[2026-01-08 23:33:01] Starting ATLAS job with PandaID=6963161600
[2026-01-08 23:33:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 02:32:42]  *** The last 200 lines of the pilot log: ***
[2026-01-09 02:32:42] 2026-01-09 07:31:42,576 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 02:32:42] 2026-01-09 07:31:43,145 | INFO     | time since job start (10704s) is within the limit (349056.0s)
[2026-01-09 02:32:42] 2026-01-09 07:31:45,079 | INFO     | monitor loop #788: job 0:6963161600 is in state 'finished'
[2026-01-09 02:32:42] 2026-01-09 07:31:45,080 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 02:32:42] 2026-01-09 07:31:45,152 | INFO     | time since job start (10706s) is within the limit (349056.0s)
[2026-01-09 02:32:42] 2026-01-09 07:31:47,158 | INFO     | time since job start (10708s) is within the limit (349056.0s)
[2026-01-09 02:32:42] 2026-01-09 07:31:47,584 | INFO     | monitor loop #789: job 0:6963161600 is in state 'finished'
[2026-01-09 02:32:42] 2026-01-09 07:31:47,586 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 02:32:42] 2026-01-09 07:31:47,941 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-09 02:32:42] 2026-01-09 07:31:47,946 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1695.875
[2026-01-09 02:32:42] 2026-01-09 07:31:47,949 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6963161600/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 02:32:42] 2026-01-09 07:31:47,950 | INFO     | extracted standard info from prmon json
[2026-01-09 02:32:42] 2026-01-09 07:31:47,950 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 02:32:42] 2026-01-09 07:31:47,950 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 02:32:42] 2026-01-09 07:31:47,951 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 02:32:42] 2026-01-09 07:31:47,951 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 02:32:42] 2026-01-09 07:31:47,956 | INFO     | fitting pss+swap vs Time
[2026-01-09 02:32:42] 2026-01-09 07:31:47,956 | INFO     | sum of square deviations: 1661798600.0
[2026-01-09 02:32:42] 2026-01-09 07:31:47,958 | INFO     | sum of deviations: -3762726561.9999995
[2026-01-09 02:32:42] 2026-01-09 07:31:47,958 | INFO     | mean x: 1767938538.0
[2026-01-09 02:32:42] 2026-01-09 07:31:47,958 | INFO     | mean y: 2526672.0114285713
[2026-01-09 02:32:42] 2026-01-09 07:31:47,958 | INFO     | intersect: 4005580529.9915986
[2026-01-09 02:32:42] 2026-01-09 07:31:47,958 | INFO     | chi2: 1.6623013060444238
[2026-01-09 02:32:42] 2026-01-09 07:31:47,959 | INFO     | sum of square deviations: 1523386702.5
[2026-01-09 02:32:42] 2026-01-09 07:31:47,960 | INFO     | sum of deviations: -3446940236.999999
[2026-01-09 02:32:42] 2026-01-09 07:31:47,960 | INFO     | mean x: 1767938385.5
[2026-01-09 02:32:42] 2026-01-09 07:31:47,960 | INFO     | mean y: 2527020.0588235296
[2026-01-09 02:32:42] 2026-01-09 07:31:47,960 | INFO     | intersect: 4002810039.1478424
[2026-01-09 02:32:42] 2026-01-09 07:31:47,960 | INFO     | chi2: 1.6623076796957867
[2026-01-09 02:32:42] 2026-01-09 07:31:47,960 | INFO     | current chi2=1.6623076796957867 (change=-0.00038342335049225325 %)
[2026-01-09 02:32:42] 2026-01-09 07:31:47,961 | INFO     | right removable region: 169
[2026-01-09 02:32:42] 2026-01-09 07:31:47,961 | INFO     | sum of square deviations: 1523386702.5
[2026-01-09 02:32:42] 2026-01-09 07:31:47,962 | INFO     | sum of deviations: -30063247625.0
[2026-01-09 02:32:42] 2026-01-09 07:31:47,962 | INFO     | mean x: 1767938690.5
[2026-01-09 02:32:42] 2026-01-09 07:31:47,962 | INFO     | mean y: 2555258.505882353
[2026-01-09 02:32:42] 2026-01-09 07:31:47,962 | INFO     | intersect: 34891909715.32
[2026-01-09 02:32:42] 2026-01-09 07:31:47,963 | INFO     | chi2: 0.18820405232347207
[2026-01-09 02:32:42] 2026-01-09 07:31:47,963 | INFO     | current chi2=0.18820405232347207 (change=88.67810236091806 %)
[2026-01-09 02:32:42] 2026-01-09 07:31:47,963 | INFO     | sum of square deviations: 1392881930.0
[2026-01-09 02:32:42] 2026-01-09 07:31:47,964 | INFO     | sum of deviations: -30408811466.00001
[2026-01-09 02:32:42] 2026-01-09 07:31:47,964 | INFO     | mean x: 1767938843.0
[2026-01-09 02:32:42] 2026-01-09 07:31:47,964 | INFO     | mean y: 2555600.036363636
[2026-01-09 02:32:42] 2026-01-09 07:31:47,964 | INFO     | intersect: 38599451576.85845
[2026-01-09 02:32:42] 2026-01-09 07:31:47,965 | INFO     | chi2: 0.1635258734931387
[2026-01-09 02:32:42] 2026-01-09 07:31:47,965 | INFO     | current chi2=0.1635258734931387 (change=13.112458805041143 %)
[2026-01-09 02:32:42] 2026-01-09 07:31:47,965 | INFO     | left removable region: 20
[2026-01-09 02:32:42] 2026-01-09 07:31:47,965 | INFO     | sum of square deviations: 1025693650.0
[2026-01-09 02:32:42] 2026-01-09 07:31:47,966 | INFO     | sum of deviations: -18766456874.000004
[2026-01-09 02:32:42] 2026-01-09 07:31:47,966 | INFO     | mean x: 1767938965.0
[2026-01-09 02:32:42] 2026-01-09 07:31:47,966 | INFO     | mean y: 2542687.3691275166
[2026-01-09 02:32:42] 2026-01-09 07:31:47,966 | INFO     | intersect: 32349384595.31767
[2026-01-09 02:32:42] 2026-01-09 07:31:47,967 | INFO     | chi2: 0.13753483602298
[2026-01-09 02:32:42] 2026-01-09 07:31:47,967 | INFO     | current memory leak: -18.30 B/s (using 149 data points, chi2=0.14)
[2026-01-09 02:32:42] 2026-01-09 07:31:47,967 | INFO     | could have reported an average CPU frequency of 2021 MHz (9 samples)
[2026-01-09 02:32:42] 2026-01-09 07:31:47,968 | INFO     | ..............................
[2026-01-09 02:32:42] 2026-01-09 07:31:47,968 | INFO     | . Timing measurements:
[2026-01-09 02:32:42] 2026-01-09 07:31:47,968 | INFO     | . get job = 0 s
[2026-01-09 02:32:42] 2026-01-09 07:31:47,968 | INFO     | . initial setup = 2 s
[2026-01-09 02:32:42] 2026-01-09 07:31:47,968 | INFO     | . payload setup = 8 s
[2026-01-09 02:32:42] 2026-01-09 07:31:47,968 | INFO     | . stage-in = 0 s
[2026-01-09 02:32:42] 2026-01-09 07:31:47,968 | INFO     | . payload execution = 10667 s
[2026-01-09 02:32:42] 2026-01-09 07:31:47,969 | INFO     | . stage-out = 0 s
[2026-01-09 02:32:42] 2026-01-09 07:31:47,969 | INFO     | . log creation = 0 s
[2026-01-09 02:32:42] 2026-01-09 07:31:47,969 | INFO     | ..............................
[2026-01-09 02:32:42] 2026-01-09 07:31:48,067 | INFO     | 
[2026-01-09 02:32:42] 2026-01-09 07:31:48,068 | INFO     | job summary report
[2026-01-09 02:32:42] 2026-01-09 07:31:48,068 | INFO     | --------------------------------------------------
[2026-01-09 02:32:42] 2026-01-09 07:31:48,068 | INFO     | PanDA job id: 6963161600
[2026-01-09 02:32:42] 2026-01-09 07:31:48,068 | INFO     | task id: 47898826
[2026-01-09 02:32:42] 2026-01-09 07:31:48,068 | INFO     | errors: (none)
[2026-01-09 02:32:42] 2026-01-09 07:31:48,069 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 02:32:42] 2026-01-09 07:31:48,069 | INFO     | pilot state: finished 
[2026-01-09 02:32:42] 2026-01-09 07:31:48,069 | INFO     | transexitcode: 0
[2026-01-09 02:32:42] 2026-01-09 07:31:48,069 | INFO     | exeerrorcode: 0
[2026-01-09 02:32:42] 2026-01-09 07:31:48,070 | INFO     | exeerrordiag: 
[2026-01-09 02:32:42] 2026-01-09 07:31:48,070 | INFO     | exitcode: 0
[2026-01-09 02:32:42] 2026-01-09 07:31:48,070 | INFO     | exitmsg: OK
[2026-01-09 02:32:42] 2026-01-09 07:31:48,070 | INFO     | cpuconsumptiontime: 79791 s
[2026-01-09 02:32:42] 2026-01-09 07:31:48,070 | INFO     | nevents: 400
[2026-01-09 02:32:42] 2026-01-09 07:31:48,070 | INFO     | neventsw: 0
[2026-01-09 02:32:42] 2026-01-09 07:31:48,071 | INFO     | pid: 11052
[2026-01-09 02:32:42] 2026-01-09 07:31:48,071 | INFO     | pgrp: 11052
[2026-01-09 02:32:42] 2026-01-09 07:31:48,071 | INFO     | corecount: 8
[2026-01-09 02:32:42] 2026-01-09 07:31:48,071 | INFO     | event service: False
[2026-01-09 02:32:42] 2026-01-09 07:31:48,071 | INFO     | sizes: {0: 2283971, 6: 2284233, 11: 2284261, 10679: 2313233, 10682: 2322231, 10683: 2322287, 10691: 2322673}
[2026-01-09 02:32:42] 2026-01-09 07:31:48,071 | INFO     | --------------------------------------------------
[2026-01-09 02:32:42] 2026-01-09 07:31:48,072 | INFO     | 
[2026-01-09 02:32:42] 2026-01-09 07:31:48,072 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-09 02:32:42] 2026-01-09 07:31:48,102 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 02:32:42] 2026-01-09 07:31:48,103 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 02:32:42] 2026-01-09 07:31:48,103 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 02:32:42] 2026-01-09 07:31:48,103 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 02:32:42] 2026-01-09 07:31:48,103 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 02:32:42] 2026-01-09 07:31:48,103 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 02:32:42] 2026-01-09 07:31:48,104 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 02:32:42] 2026-01-09 07:31:48,104 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 02:32:42] 2026-01-09 07:31:48,104 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 02:32:42] 2026-01-09 07:31:48,104 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 02:32:42] 2026-01-09 07:31:48,104 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 02:32:42] 2026-01-09 07:31:48,105 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 02:32:42] 2026-01-09 07:31:48,105 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 02:32:42] 2026-01-09 07:31:48,105 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 02:32:42] 2026-01-09 07:31:48,105 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 02:32:42] 2026-01-09 07:31:48,105 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 02:32:42] 2026-01-09 07:31:48,106 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 02:32:42] 2026-01-09 07:31:48,106 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 02:32:42] 2026-01-09 07:31:48,106 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 02:32:42] 2026-01-09 07:31:48,106 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 02:32:42] 2026-01-09 07:31:48,106 | INFO     | job 6963161600 has completed (purged errors)
[2026-01-09 02:32:42] 2026-01-09 07:31:48,107 | INFO     | overall cleanup function is called
[2026-01-09 02:32:42] 2026-01-09 07:31:49,115 | INFO     | --- collectZombieJob: --- 10, [11052]
[2026-01-09 02:32:42] 2026-01-09 07:31:49,115 | INFO     | zombie collector waiting for pid 11052
[2026-01-09 02:32:42] 2026-01-09 07:31:49,116 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 02:32:42] 2026-01-09 07:31:49,116 | INFO     | collected zombie processes
[2026-01-09 02:32:42] 2026-01-09 07:31:49,116 | INFO     | will attempt to kill all subprocesses of pid=11052
[2026-01-09 02:32:42] 2026-01-09 07:31:49,206 | INFO     | process IDs to be killed: [11052] (in reverse order)
[2026-01-09 02:32:42] 2026-01-09 07:31:49,264 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 02:32:42] 2026-01-09 07:31:49,265 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 02:32:42] 2026-01-09 07:31:49,269 | INFO     | did not find any defunct processes belonging to 11052
[2026-01-09 02:32:42] 2026-01-09 07:31:49,273 | INFO     | did not find any defunct processes belonging to 11052
[2026-01-09 02:32:42] 2026-01-09 07:31:49,273 | INFO     | ready for new job
[2026-01-09 02:32:42] 2026-01-09 07:31:49,273 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 02:32:42] 2026-01-09 07:31:49,276 | INFO     | ***************************************
[2026-01-09 02:32:42] 2026-01-09 07:31:49,276 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 02:32:42] 2026-01-09 07:31:49,276 | INFO     | ***************************************
[2026-01-09 02:32:42] 2026-01-09 07:31:49,277 | INFO     | 
[2026-01-09 02:32:42] 2026-01-09 07:31:49,277 | INFO     | architecture information:
[2026-01-09 02:32:42] 2026-01-09 07:31:49,278 | INFO     | executing command: cat /etc/os-release
[2026-01-09 02:32:42] 2026-01-09 07:31:49,298 | INFO     | cat /etc/os-release:
[2026-01-09 02:32:42] NAME="CentOS Linux"
[2026-01-09 02:32:42] VERSION="7 (Core)"
[2026-01-09 02:32:42] ID="centos"
[2026-01-09 02:32:42] ID_LIKE="rhel fedora"
[2026-01-09 02:32:42] VERSION_ID="7"
[2026-01-09 02:32:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 02:32:42] ANSI_COLOR="0;31"
[2026-01-09 02:32:42] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 02:32:42] HOME_URL="https://www.centos.org/"
[2026-01-09 02:32:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 02:32:42] 
[2026-01-09 02:32:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 02:32:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 02:32:42] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 02:32:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 02:32:42] 
[2026-01-09 02:32:42] 2026-01-09 07:31:49,298 | INFO     | ***************************************
[2026-01-09 02:32:42] 2026-01-09 07:31:49,802 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-09 02:32:42] 2026-01-09 07:31:49,824 | INFO     | sufficient remaining disk space (18539872256 B)
[2026-01-09 02:32:42] 2026-01-09 07:31:49,825 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 02:32:42] 2026-01-09 07:31:49,825 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 02:32:42] 2026-01-09 07:31:49,825 | INFO     | update_server=False
[2026-01-09 02:32:42] 2026-01-09 07:31:49,825 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 02:32:42] 2026-01-09 07:31:49,826 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 02:32:42] 2026-01-09 07:31:49,826 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 02:32:42] 2026-01-09 07:31:50,089 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-09 02:32:42] 2026-01-09 07:31:50,090 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-09 02:32:42] 2026-01-09 07:31:50,090 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 02:32:42] 2026-01-09 07:31:50,090 | INFO     | will abort loop
[2026-01-09 02:32:42] 2026-01-09 07:31:50,456 | INFO     | all payload control threads have been joined
[2026-01-09 02:32:42] 2026-01-09 07:31:50,601 | INFO     | all data control threads have been joined
[2026-01-09 02:32:42] 2026-01-09 07:31:50,684 | INFO     | all job control threads have been joined
[2026-01-09 02:32:42] 2026-01-09 07:31:50,740 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 02:32:42] 2026-01-09 07:31:50,826 | INFO     | [job] retrieve thread has finished
[2026-01-09 02:32:42] 2026-01-09 07:31:50,829 | INFO     | [job] queue monitor thread has finished
[2026-01-09 02:32:42] 2026-01-09 07:31:50,872 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 02:32:42] 2026-01-09 07:31:51,096 | INFO     | [job] job monitor thread has finished
[2026-01-09 02:32:42] 2026-01-09 07:31:51,185 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 02:32:42] 2026-01-09 07:31:51,395 | INFO     | [data] copytool_in thread has finished
[2026-01-09 02:32:42] 2026-01-09 07:31:51,462 | INFO     | [payload] control thread has finished
[2026-01-09 02:32:42] 2026-01-09 07:31:51,548 | INFO     | [payload] validate_post thread has finished
[2026-01-09 02:32:42] 2026-01-09 07:31:51,603 | INFO     | [data] control thread has finished
[2026-01-09 02:32:42] 2026-01-09 07:31:51,689 | INFO     | [job] control thread has finished
[2026-01-09 02:32:42] 2026-01-09 07:31:51,832 | INFO     | [data] copytool_out thread has finished
[2026-01-09 02:32:42] 2026-01-09 07:31:52,071 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 02:32:42] 2026-01-09 07:31:52,162 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 02:32:42] 2026-01-09 07:31:52,173 | INFO     | [job] validate thread has finished
[2026-01-09 02:32:42] 2026-01-09 07:31:52,188 | INFO     | [payload] failed_post thread has finished
[2026-01-09 02:32:42] 2026-01-09 07:31:54,746 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 02:32:42] 2026-01-09 07:32:20,388 | INFO     | PID=4563 has CPU usage=3.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-09 02:32:42] 2026-01-09 07:32:20,390 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 02:32:42] 2026-01-09 07:32:20,390 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 02:32:42] 2026-01-09 07:32:20,390 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 02:32:42] 2026-01-09 07:32:36,145 | INFO     | [monitor] cgroup control has ended
[2026-01-09 02:32:42] 2026-01-09 07:32:37,104 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139861607012160)>', '<ExcThread(monitor, started 139860643936000)>']
[2026-01-09 02:32:42] 2026-01-09 07:32:37,460 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 02:32:42] 2026-01-09 07:32:37,460 | INFO     | [monitor] control thread has ended
[2026-01-09 02:32:42] 2026-01-09 07:32:42,127 | INFO     | all workflow threads have been joined
[2026-01-09 02:32:42] 2026-01-09 07:32:42,128 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 02:32:42] 2026-01-09 07:32:42,128 | INFO     | traces error code: 0
[2026-01-09 02:32:42] 2026-01-09 07:32:42,129 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 02:32:42] 2026-01-09 07:32:42,258 [wrapper] ==== pilot stdout END ====
[2026-01-09 02:32:42] 2026-01-09 07:32:42,262 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 02:32:42] 2026-01-09 07:32:42,267 [wrapper] pilotpid: 4563
[2026-01-09 02:32:42] 2026-01-09 07:32:42,272 [wrapper] Pilot exit status: 0
[2026-01-09 02:32:42] 2026-01-09 07:32:42,289 [wrapper] pandaids: 6963161600
[2026-01-09 02:32:42] 2026-01-09 07:32:42,339 [wrapper] cleanup supervisor_pilot 23409 4564
[2026-01-09 02:32:42] 2026-01-09 07:32:42,344 [wrapper] Test setup, not cleaning
[2026-01-09 02:32:42] 2026-01-09 07:32:42,349 [wrapper] apfmon messages muted
[2026-01-09 02:32:42] 2026-01-09 07:32:42,353 [wrapper] ==== wrapper stdout END ====
[2026-01-09 02:32:42] 2026-01-09 07:32:42,358 [wrapper] ==== wrapper stderr END ====
[2026-01-09 02:32:42]  *** Error codes and diagnostics ***
[2026-01-09 02:32:42]     "exeErrorCode": 0,
[2026-01-09 02:32:42]     "exeErrorDiag": "",
[2026-01-09 02:32:42]     "pilotErrorCode": 0,
[2026-01-09 02:32:42]     "pilotErrorDiag": "",
[2026-01-09 02:32:42]  *** Listing of results directory ***
[2026-01-09 02:32:42] total 435652
[2026-01-09 02:32:42] -rw-r--r-- 1 boincer umatlas    579449 Jan  8 16:44 pilot3.tar.gz
[2026-01-09 02:32:42] -rwx------ 1 boincer umatlas     36322 Jan  8 16:49 runpilot2-wrapper.sh
[2026-01-09 02:32:42] -rw-r--r-- 1 boincer umatlas      5112 Jan  8 16:51 queuedata.json
[2026-01-09 02:32:42] -rw-r--r-- 1 boincer umatlas       100 Jan  8 23:32 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 02:32:42] -rwxr-xr-x 1 boincer umatlas      7986 Jan  8 23:32 run_atlas
[2026-01-09 02:32:42] -rw-r--r-- 1 boincer umatlas       105 Jan  8 23:32 job.xml
[2026-01-09 02:32:42] -rw-r--r-- 2 boincer umatlas 222847977 Jan  8 23:32 EVNT.47898824._001286.pool.root.1
[2026-01-09 02:32:42] -rw-r--r-- 2 boincer umatlas     15847 Jan  8 23:32 start_atlas.sh
[2026-01-09 02:32:42] drwxrwx--x 2 boincer umatlas      4096 Jan  8 23:32 shared
[2026-01-09 02:32:42] -rw-r--r-- 2 boincer umatlas    592402 Jan  8 23:32 input.tar.gz
[2026-01-09 02:32:42] -rw-r--r-- 1 boincer umatlas         0 Jan  8 23:32 boinc_lockfile
[2026-01-09 02:32:42] -rw-r--r-- 1 boincer umatlas      2520 Jan  8 23:33 pandaJob.out
[2026-01-09 02:32:42] -rw------- 1 boincer umatlas        57 Jan  8 23:33 setup.sh.local
[2026-01-09 02:32:42] -rw------- 1 boincer umatlas    989771 Jan  8 23:33 agis_schedconf.cvmfs.json
[2026-01-09 02:32:42] -rw------- 1 boincer umatlas   1516240 Jan  8 23:33 agis_ddmendpoints.agis.ALL.json
[2026-01-09 02:32:42] drwx------ 5 boincer umatlas      4096 Jan  8 23:33 pilot3
[2026-01-09 02:32:42] -rw-r--r-- 1 boincer umatlas      5910 Jan  9 02:30 init_data.xml
[2026-01-09 02:32:42] -rw------- 1 boincer umatlas 215551681 Jan  9 02:31 HITS.47898826._033262.pool.root.1
[2026-01-09 02:32:42] -rw-r--r-- 1 boincer umatlas       530 Jan  9 02:31 boinc_task_state.xml
[2026-01-09 02:32:42] -rw------- 1 boincer umatlas      1048 Jan  9 02:31 memory_monitor_summary.json
[2026-01-09 02:32:42] -rw------- 1 boincer umatlas    413974 Jan  9 02:31 log.47898826._033262.job.log.tgz.1
[2026-01-09 02:32:42] -rw------- 1 boincer umatlas      7848 Jan  9 02:31 heartbeat.json
[2026-01-09 02:32:42] -rw------- 1 boincer umatlas        95 Jan  9 02:32 pilot_heartbeat.json
[2026-01-09 02:32:42] -rw-r--r-- 1 boincer umatlas      8192 Jan  9 02:32 boinc_mmap_file
[2026-01-09 02:32:42] -rw-r--r-- 1 boincer umatlas        28 Jan  9 02:32 wrapper_checkpoint.txt
[2026-01-09 02:32:42] -rw------- 1 boincer umatlas      4931 Jan  9 02:32 pilotlog.txt
[2026-01-09 02:32:42] -rw------- 1 boincer umatlas   1481769 Jan  9 02:32 log.47898826._033262.job.log.1
[2026-01-09 02:32:42] -rw------- 1 boincer umatlas       357 Jan  9 02:32 output.list
[2026-01-09 02:32:42] -rw-r--r-- 1 boincer umatlas       620 Jan  9 02:32 runtime_log
[2026-01-09 02:32:42] -rw------- 1 boincer umatlas   1914880 Jan  9 02:32 result.tar.gz
[2026-01-09 02:32:42] -rw-r--r-- 1 boincer umatlas      9338 Jan  9 02:32 runtime_log.err
[2026-01-09 02:32:42] -rw------- 1 boincer umatlas       661 Jan  9 02:32 mDRNDmY3Cy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmsblKDmeOmoun.diag
[2026-01-09 02:32:42] -rw-r--r-- 1 boincer umatlas     21304 Jan  9 02:32 stderr.txt
[2026-01-09 02:32:42] HITS file was successfully produced:
[2026-01-09 02:32:42] -rw------- 1 boincer umatlas 215551681 Jan  9 02:31 shared/HITS.pool.root.1
[2026-01-09 02:32:42]  *** Contents of shared directory: ***
[2026-01-09 02:32:42] total 430600
[2026-01-09 02:32:42] -rw-r--r-- 2 boincer umatlas 222847977 Jan  8 23:32 ATLAS.root_0
[2026-01-09 02:32:42] -rw-r--r-- 2 boincer umatlas     15847 Jan  8 23:32 start_atlas.sh
[2026-01-09 02:32:42] -rw-r--r-- 2 boincer umatlas    592402 Jan  8 23:32 input.tar.gz
[2026-01-09 02:32:42] -rw------- 1 boincer umatlas 215551681 Jan  9 02:31 HITS.pool.root.1
[2026-01-09 02:32:42] -rw------- 1 boincer umatlas   1914880 Jan  9 02:32 result.tar.gz
02:32:43 (741): run_atlas exited; CPU time 79757.668164
02:32:43 (741): called boinc_finish(0)

</stderr_txt>
]]>

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