Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
07:25:13 (384457): wrapper (7.7.26015): starting
07:25:13 (384457): wrapper: running run_atlas (--nthreads 3)
[2026-01-09 07:25:13] Arguments: --nthreads 3
[2026-01-09 07:25:13] Threads: 3
[2026-01-09 07:25:13] Checking for CVMFS
[2026-01-09 07:25:13] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 07:25:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 07:25:13] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 07:25:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 07:25:13] 2.9.2.0 86975 1247 73600 154934 3 56 11687980 36864001 0 130560 0 787325 99.987 50857 3569 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-09 07:25:13] CVMFS is ok
[2026-01-09 07:25:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 07:25:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 07:25:13] Further information can be found at the LHC@home message board.
[2026-01-09 07:25:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 07:25:13] Checking for apptainer binary...
[2026-01-09 07:25:13] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 07:25:13] Running /usr/bin/apptainer --version
[2026-01-09 07:25:13] apptainer version 1.4.1-1.1
[2026-01-09 07:25:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 07:25:13] thA330a
[2026-01-09 07:25:13] apptainer works
[2026-01-09 07:25:13] Set ATHENA_PROC_NUMBER=3
[2026-01-09 07:25:13] Set ATHENA_CORE_NUMBER=3
[2026-01-09 07:25:13] Starting ATLAS job with PandaID=6963156766
[2026-01-09 07:25:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 09:16:57]  *** The last 200 lines of the pilot log: ***
[2026-01-09 09:16:57] 2026-01-09 08:16:26,838 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 09:16:57] 2026-01-09 08:16:26,838 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 09:16:57] 2026-01-09 08:16:27,171 | INFO     | all data control threads have been joined
[2026-01-09 09:16:57] 2026-01-09 08:16:27,241 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 09:16:57] 2026-01-09 08:16:27,242 | INFO     | aborting loop
[2026-01-09 09:16:57] 2026-01-09 08:16:27,273 | INFO     | all job control threads have been joined
[2026-01-09 09:16:57] 2026-01-09 08:16:27,391 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 09:16:57] 2026-01-09 08:16:27,556 | INFO     | all payload control threads have been joined
[2026-01-09 09:16:57] 2026-01-09 08:16:27,844 | INFO     | [job] retrieve thread has finished
[2026-01-09 09:16:57] 2026-01-09 08:16:27,844 | INFO     | [job] queue monitor thread has finished
[2026-01-09 09:16:57] 2026-01-09 08:16:28,132 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 09:16:57] 2026-01-09 08:16:28,173 | INFO     | [data] control thread has finished
[2026-01-09 09:16:57] 2026-01-09 08:16:28,247 | INFO     | [job] job monitor thread has finished
[2026-01-09 09:16:57] 2026-01-09 08:16:28,279 | INFO     | [job] control thread has finished
[2026-01-09 09:16:57] 2026-01-09 08:16:28,525 | INFO     | [monitor] cgroup control has ended
[2026-01-09 09:16:57] 2026-01-09 08:16:28,562 | INFO     | [payload] control thread has finished
[2026-01-09 09:16:57] 2026-01-09 08:16:28,621 | INFO     | [data] copytool_in thread has finished
[2026-01-09 09:16:57] 2026-01-09 08:16:28,661 | INFO     | [payload] validate_post thread has finished
[2026-01-09 09:16:57] 2026-01-09 08:16:28,844 | INFO     | [data] copytool_out thread has finished
[2026-01-09 09:16:57] 2026-01-09 08:16:28,920 | INFO     | [payload] failed_post thread has finished
[2026-01-09 09:16:57] 2026-01-09 08:16:29,153 | INFO     | [job] validate thread has finished
[2026-01-09 09:16:57] 2026-01-09 08:16:29,222 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 09:16:57] 2026-01-09 08:16:29,276 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 09:16:57] 2026-01-09 08:16:31,398 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 09:16:57] 2026-01-09 08:16:37,105 | INFO     | job.realtimelogging is not enabled
[2026-01-09 09:16:57] 2026-01-09 08:16:38,110 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 09:16:57] 2026-01-09 08:16:38,207 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140615198320448)>', '<ExcThread(monitor, started 140614846887680)>']
[2026-01-09 09:16:57] 2026-01-09 08:16:43,233 | INFO     | all workflow threads have been joined
[2026-01-09 09:16:57] 2026-01-09 08:16:43,233 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 09:16:57] 2026-01-09 08:16:43,233 | INFO     | traces error code: 0
[2026-01-09 09:16:57] 2026-01-09 08:16:43,233 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 09:16:57] 2026-01-09 08:16:56,893 | INFO     | PID=388184 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-09 09:16:57] 2026-01-09 08:16:56,893 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 09:16:57] 2026-01-09 08:16:56,894 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 09:16:57] 2026-01-09 08:16:56,894 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 09:16:57] 2026-01-09 08:16:56,894 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 09:16:57] 2026-01-09 08:16:56,894 | INFO     | [monitor] control thread has ended
[2026-01-09 09:16:57] 2026-01-09 08:16:56,940 [wrapper] ==== pilot stdout END ====
[2026-01-09 09:16:57] 2026-01-09 08:16:56,943 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 09:16:57] 2026-01-09 08:16:56,945 [wrapper] pilotpid: 388184
[2026-01-09 09:16:57] 2026-01-09 08:16:56,947 [wrapper] Pilot exit status: 0
[2026-01-09 09:16:57] 2026-01-09 08:16:56,954 [wrapper] pandaids: 6963156766
[2026-01-09 09:16:57] 2026-01-09 08:16:56,971 [wrapper] cleanup supervisor_pilot  409011 388185
[2026-01-09 09:16:57] 2026-01-09 08:16:56,973 [wrapper] Test setup, not cleaning
[2026-01-09 09:16:57] 2026-01-09 08:16:56,975 [wrapper] apfmon messages muted
[2026-01-09 09:16:57] 2026-01-09 08:16:56,977 [wrapper] ==== wrapper stdout END ====
[2026-01-09 09:16:57] 2026-01-09 08:16:56,980 [wrapper] ==== wrapper stderr END ====
[2026-01-09 09:16:57]  *** Error codes and diagnostics ***
[2026-01-09 09:16:57]     "exeErrorCode": 0,
[2026-01-09 09:16:57]     "exeErrorDiag": "",
[2026-01-09 09:16:57]     "pilotErrorCode": 0,
[2026-01-09 09:16:57]     "pilotErrorDiag": "",
[2026-01-09 09:16:57]  *** Listing of results directory ***
[2026-01-09 09:16:57] total 438068
[2026-01-09 09:16:57] -rw-r--r-- 1 boinc boinc    579449 Jan  8 22:44 pilot3.tar.gz
[2026-01-09 09:16:57] -rwx------ 1 boinc boinc     36322 Jan  8 22:48 runpilot2-wrapper.sh
[2026-01-09 09:16:57] -rw-r--r-- 1 boinc boinc      5112 Jan  8 22:51 queuedata.json
[2026-01-09 09:16:57] -rw-r--r-- 1 boinc boinc       100 Jan  9 07:25 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 09:16:57] -rwxr-xr-x 1 boinc boinc      7986 Jan  9 07:25 run_atlas
[2026-01-09 09:16:57] -rw-r--r-- 1 boinc boinc       105 Jan  9 07:25 job.xml
[2026-01-09 09:16:57] -rw-r--r-- 2 boinc boinc 222964911 Jan  9 07:25 EVNT.47898824._001212.pool.root.1
[2026-01-09 09:16:57] -rw-r--r-- 2 boinc boinc    592402 Jan  9 07:25 input.tar.gz
[2026-01-09 09:16:57] -rw-r--r-- 2 boinc boinc     15847 Jan  9 07:25 start_atlas.sh
[2026-01-09 09:16:57] drwxrwx--x 2 boinc boinc      4096 Jan  9 07:25 shared
[2026-01-09 09:16:57] -rw-r--r-- 1 boinc boinc         0 Jan  9 07:25 boinc_setup_complete
[2026-01-09 09:16:57] -rw-r--r-- 1 boinc boinc      6440 Jan  9 07:25 init_data.xml
[2026-01-09 09:16:57] -rw-r--r-- 1 boinc boinc         0 Jan  9 07:25 boinc_lockfile
[2026-01-09 09:16:57] -rw-r--r-- 1 boinc boinc      2520 Jan  9 07:25 pandaJob.out
[2026-01-09 09:16:57] -rw------- 1 boinc boinc    989771 Jan  9 07:25 agis_schedconf.cvmfs.json
[2026-01-09 09:16:57] -rw------- 1 boinc boinc   1516240 Jan  9 07:25 agis_ddmendpoints.agis.ALL.json
[2026-01-09 09:16:57] drwx------ 5 boinc boinc      4096 Jan  9 07:25 pilot3
[2026-01-09 09:16:57] -rw------- 1 boinc boinc 219236950 Jan  9 09:16 HITS.47898826._031915.pool.root.1
[2026-01-09 09:16:57] -rw-r--r-- 1 boinc boinc       530 Jan  9 09:16 boinc_task_state.xml
[2026-01-09 09:16:57] -rw------- 1 boinc boinc      1019 Jan  9 09:16 memory_monitor_summary.json
[2026-01-09 09:16:57] -rw------- 1 boinc boinc    283519 Jan  9 09:16 log.47898826._031915.job.log.tgz.1
[2026-01-09 09:16:57] -rw------- 1 boinc boinc      7766 Jan  9 09:16 heartbeat.json
[2026-01-09 09:16:57] -rw-r--r-- 1 boinc boinc      8192 Jan  9 09:16 boinc_mmap_file
[2026-01-09 09:16:57] -rw-r--r-- 1 boinc boinc        27 Jan  9 09:16 wrapper_checkpoint.txt
[2026-01-09 09:16:57] -rw------- 1 boinc boinc       746 Jan  9 09:16 pilotlog.txt
[2026-01-09 09:16:57] -rw------- 1 boinc boinc        95 Jan  9 09:16 pilot_heartbeat.json
[2026-01-09 09:16:57] -rw------- 1 boinc boinc    961878 Jan  9 09:16 log.47898826._031915.job.log.1
[2026-01-09 09:16:57] -rw------- 1 boinc boinc       357 Jan  9 09:16 output.list
[2026-01-09 09:16:57] -rw-r--r-- 1 boinc boinc       620 Jan  9 09:16 runtime_log
[2026-01-09 09:16:57] -rw------- 1 boinc boinc   1259520 Jan  9 09:16 result.tar.gz
[2026-01-09 09:16:57] -rw-r--r-- 1 boinc boinc      8902 Jan  9 09:16 runtime_log.err
[2026-01-09 09:16:57] -rw------- 1 boinc boinc       660 Jan  9 09:16 q3XNDmL3Cy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmrNgKDmIk5Hkm.diag
[2026-01-09 09:16:57] -rw-r--r-- 1 boinc boinc      7282 Jan  9 09:16 stderr.txt
[2026-01-09 09:16:57] HITS file was successfully produced:
[2026-01-09 09:16:57] -rw------- 1 boinc boinc 219236950 Jan  9 09:16 shared/HITS.pool.root.1
[2026-01-09 09:16:57]  *** Contents of shared directory: ***
[2026-01-09 09:16:57] total 433676
[2026-01-09 09:16:57] -rw-r--r-- 2 boinc boinc 222964911 Jan  9 07:25 ATLAS.root_0
[2026-01-09 09:16:57] -rw-r--r-- 2 boinc boinc    592402 Jan  9 07:25 input.tar.gz
[2026-01-09 09:16:57] -rw-r--r-- 2 boinc boinc     15847 Jan  9 07:25 start_atlas.sh
[2026-01-09 09:16:57] -rw------- 1 boinc boinc 219236950 Jan  9 09:16 HITS.pool.root.1
[2026-01-09 09:16:57] -rw------- 1 boinc boinc   1259520 Jan  9 09:16 result.tar.gz
09:16:58 (384457): run_atlas exited; CPU time 19324.603957
09:16:58 (384457): called boinc_finish(0)

</stderr_txt>
]]>

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