Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
23:21:54 (53395): wrapper (7.7.26015): starting
23:21:54 (53395): wrapper: running run_atlas (--nthreads 8)
[2026-01-08 23:21:54] Arguments: --nthreads 8
[2026-01-08 23:21:54] Threads: 8
[2026-01-08 23:21:54] Checking for CVMFS
[2026-01-08 23:21:54] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 23:21:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 23:21:54] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 23:21:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 23:21:54] 2.13.3.0 10954 92922 398048 154931 0 61 22498082 32935937 10026 16776704 26 360452857 99.471 528960775 38303 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-08 23:21:54] CVMFS is ok
[2026-01-08 23:21:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-08 23:21:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-08 23:21:54] Further information can be found at the LHC@home message board.
[2026-01-08 23:21:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 23:21:54] Checking for apptainer binary...
[2026-01-08 23:21:54] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-08 23:21:54] Running /usr/bin/apptainer --version
[2026-01-08 23:21:55] apptainer version 1.4.5-2.el9
[2026-01-08 23:21:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 23:21:55] c7-11-13.aglt2.org
[2026-01-08 23:21:55] apptainer works
[2026-01-08 23:21:55] Set ATHENA_PROC_NUMBER=8
[2026-01-08 23:21:55] Set ATHENA_CORE_NUMBER=8
[2026-01-08 23:21:55] Starting ATLAS job with PandaID=6963160979
[2026-01-08 23:21:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 02:37:40]  *** The last 200 lines of the pilot log: ***
[2026-01-09 02:37:40] 2026-01-09 07:36:44,811 | INFO     | time since job start (11670s) is within the limit (349056.0s)
[2026-01-09 02:37:40] 2026-01-09 07:36:46,533 | INFO     | monitor loop #762: job 0:6963160979 is in state 'finished'
[2026-01-09 02:37:40] 2026-01-09 07:36:46,533 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 02:37:40] 2026-01-09 07:36:46,818 | INFO     | time since job start (11672s) is within the limit (349056.0s)
[2026-01-09 02:37:40] 2026-01-09 07:36:48,825 | INFO     | time since job start (11674s) is within the limit (349056.0s)
[2026-01-09 02:37:40] 2026-01-09 07:36:49,037 | INFO     | monitor loop #763: job 0:6963160979 is in state 'finished'
[2026-01-09 02:37:40] 2026-01-09 07:36:49,037 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 02:37:40] 2026-01-09 07:36:50,840 | INFO     | time since job start (11676s) is within the limit (349056.0s)
[2026-01-09 02:37:40] 2026-01-09 07:36:50,966 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 02:37:40] 2026-01-09 07:36:50,973 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 3292.323046875
[2026-01-09 02:37:40] 2026-01-09 07:36:50,983 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6963160979/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 02:37:40] 2026-01-09 07:36:50,983 | INFO     | extracted standard info from prmon json
[2026-01-09 02:37:40] 2026-01-09 07:36:50,983 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 02:37:40] 2026-01-09 07:36:50,983 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 02:37:40] 2026-01-09 07:36:50,984 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 02:37:40] 2026-01-09 07:36:50,984 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 02:37:40] 2026-01-09 07:36:50,987 | INFO     | fitting pss+swap vs Time
[2026-01-09 02:37:40] 2026-01-09 07:36:50,987 | INFO     | sum of square deviations: 2160728061.17278
[2026-01-09 02:37:40] 2026-01-09 07:36:50,988 | INFO     | sum of deviations: -35694797380.04712
[2026-01-09 02:37:40] 2026-01-09 07:36:50,988 | INFO     | mean x: 1767938367.5549738
[2026-01-09 02:37:40] 2026-01-09 07:36:50,988 | INFO     | mean y: 2571552.57591623
[2026-01-09 02:37:40] 2026-01-09 07:36:50,988 | INFO     | intersect: 29208561396.588894
[2026-01-09 02:37:40] 2026-01-09 07:36:50,988 | INFO     | chi2: 1.5626154528477563
[2026-01-09 02:37:40] 2026-01-09 07:36:50,989 | INFO     | sum of square deviations: 1995482872.0913994
[2026-01-09 02:37:40] 2026-01-09 07:36:50,990 | INFO     | sum of deviations: -34753896477.01074
[2026-01-09 02:37:40] 2026-01-09 07:36:50,990 | INFO     | mean x: 1767938215.0698924
[2026-01-09 02:37:40] 2026-01-09 07:36:50,990 | INFO     | mean y: 2572428.4623655914
[2026-01-09 02:37:40] 2026-01-09 07:36:50,990 | INFO     | intersect: 30793486529.315605
[2026-01-09 02:37:40] 2026-01-09 07:36:50,990 | INFO     | chi2: 1.5552166667858496
[2026-01-09 02:37:40] 2026-01-09 07:36:50,990 | INFO     | current chi2=1.5552166667858496 (change=0.4734873220678144 %)
[2026-01-09 02:37:40] 2026-01-09 07:36:50,990 | INFO     | right removable region: 185
[2026-01-09 02:37:40] 2026-01-09 07:36:50,990 | INFO     | sum of square deviations: 1995418212.0913994
[2026-01-09 02:37:40] 2026-01-09 07:36:50,991 | INFO     | sum of deviations: -59811462851.9355
[2026-01-09 02:37:40] 2026-01-09 07:36:50,991 | INFO     | mean x: 1767938520.0698924
[2026-01-09 02:37:40] 2026-01-09 07:36:50,991 | INFO     | mean y: 2593469.2258064514
[2026-01-09 02:37:40] 2026-01-09 07:36:50,991 | INFO     | intersect: 52995489132.35443
[2026-01-09 02:37:40] 2026-01-09 07:36:50,992 | INFO     | chi2: 0.2736541569830638
[2026-01-09 02:37:40] 2026-01-09 07:36:50,992 | INFO     | current chi2=0.2736541569830638 (change=82.48742795392504 %)
[2026-01-09 02:37:40] 2026-01-09 07:36:50,992 | INFO     | sum of square deviations: 1838759687.922652
[2026-01-09 02:37:40] 2026-01-09 07:36:50,993 | INFO     | sum of deviations: -54095814873.6575
[2026-01-09 02:37:40] 2026-01-09 07:36:50,993 | INFO     | mean x: 1767938672.5856354
[2026-01-09 02:37:40] 2026-01-09 07:36:50,993 | INFO     | mean y: 2587897.9779005526
[2026-01-09 02:37:40] 2026-01-09 07:36:50,993 | INFO     | intersect: 52014867571.250435
[2026-01-09 02:37:40] 2026-01-09 07:36:50,993 | INFO     | chi2: 0.2725095179290516
[2026-01-09 02:37:40] 2026-01-09 07:36:50,993 | INFO     | current chi2=0.2725095179290516 (change=0.41827943219697816 %)
[2026-01-09 02:37:40] 2026-01-09 07:36:50,993 | INFO     | left removable region: 20
[2026-01-09 02:37:40] 2026-01-09 07:36:50,994 | INFO     | sum of square deviations: 1392958017.9030252
[2026-01-09 02:37:40] 2026-01-09 07:36:50,994 | INFO     | sum of deviations: -38546180394.563644
[2026-01-09 02:37:40] 2026-01-09 07:36:50,995 | INFO     | mean x: 1767938794.6424243
[2026-01-09 02:37:40] 2026-01-09 07:36:50,995 | INFO     | mean y: 2573959.109090909
[2026-01-09 02:37:40] 2026-01-09 07:36:50,995 | INFO     | intersect: 48925288663.33543
[2026-01-09 02:37:40] 2026-01-09 07:36:50,995 | INFO     | chi2: 0.24314017756369372
[2026-01-09 02:37:40] 2026-01-09 07:36:50,995 | INFO     | current memory leak: -27.67 B/s (using 165 data points, chi2=0.24)
[2026-01-09 02:37:40] 2026-01-09 07:36:50,995 | INFO     | could have reported an average CPU frequency of 3291 MHz (10 samples)
[2026-01-09 02:37:40] 2026-01-09 07:36:50,995 | INFO     | ..............................
[2026-01-09 02:37:40] 2026-01-09 07:36:50,995 | INFO     | . Timing measurements:
[2026-01-09 02:37:40] 2026-01-09 07:36:50,996 | INFO     | . get job = 0 s
[2026-01-09 02:37:40] 2026-01-09 07:36:50,996 | INFO     | . initial setup = 2 s
[2026-01-09 02:37:40] 2026-01-09 07:36:50,996 | INFO     | . payload setup = 11 s
[2026-01-09 02:37:40] 2026-01-09 07:36:50,996 | INFO     | . stage-in = 0 s
[2026-01-09 02:37:40] 2026-01-09 07:36:50,996 | INFO     | . payload execution = 11629 s
[2026-01-09 02:37:40] 2026-01-09 07:36:50,996 | INFO     | . stage-out = 2 s
[2026-01-09 02:37:40] 2026-01-09 07:36:50,996 | INFO     | . log creation = 0 s
[2026-01-09 02:37:40] 2026-01-09 07:36:50,996 | INFO     | ..............................
[2026-01-09 02:37:40] 2026-01-09 07:36:51,147 | INFO     | 
[2026-01-09 02:37:40] 2026-01-09 07:36:51,148 | INFO     | job summary report
[2026-01-09 02:37:40] 2026-01-09 07:36:51,148 | INFO     | --------------------------------------------------
[2026-01-09 02:37:40] 2026-01-09 07:36:51,148 | INFO     | PanDA job id: 6963160979
[2026-01-09 02:37:40] 2026-01-09 07:36:51,148 | INFO     | task id: 47898826
[2026-01-09 02:37:40] 2026-01-09 07:36:51,148 | INFO     | errors: (none)
[2026-01-09 02:37:40] 2026-01-09 07:36:51,148 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 02:37:40] 2026-01-09 07:36:51,148 | INFO     | pilot state: finished 
[2026-01-09 02:37:40] 2026-01-09 07:36:51,148 | INFO     | transexitcode: 0
[2026-01-09 02:37:40] 2026-01-09 07:36:51,148 | INFO     | exeerrorcode: 0
[2026-01-09 02:37:40] 2026-01-09 07:36:51,148 | INFO     | exeerrordiag: 
[2026-01-09 02:37:40] 2026-01-09 07:36:51,148 | INFO     | exitcode: 0
[2026-01-09 02:37:40] 2026-01-09 07:36:51,148 | INFO     | exitmsg: OK
[2026-01-09 02:37:40] 2026-01-09 07:36:51,148 | INFO     | cpuconsumptiontime: 46263 s
[2026-01-09 02:37:40] 2026-01-09 07:36:51,148 | INFO     | nevents: 400
[2026-01-09 02:37:40] 2026-01-09 07:36:51,149 | INFO     | neventsw: 0
[2026-01-09 02:37:40] 2026-01-09 07:36:51,149 | INFO     | pid: 64981
[2026-01-09 02:37:40] 2026-01-09 07:36:51,149 | INFO     | pgrp: 64981
[2026-01-09 02:37:40] 2026-01-09 07:36:51,149 | INFO     | corecount: 8
[2026-01-09 02:37:40] 2026-01-09 07:36:51,149 | INFO     | event service: False
[2026-01-09 02:37:40] 2026-01-09 07:36:51,149 | INFO     | sizes: {0: 2283143, 1: 2283999, 11: 2284261, 12: 2284289, 11645: 2313829, 11648: 2322827, 11650: 2323011, 11659: 2323205}
[2026-01-09 02:37:40] 2026-01-09 07:36:51,149 | INFO     | --------------------------------------------------
[2026-01-09 02:37:40] 2026-01-09 07:36:51,149 | INFO     | 
[2026-01-09 02:37:40] 2026-01-09 07:36:51,149 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-01-09 02:37:40] 2026-01-09 07:36:51,191 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 02:37:40] 2026-01-09 07:36:51,191 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 02:37:40] 2026-01-09 07:36:51,192 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 02:37:40] 2026-01-09 07:36:51,192 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 02:37:40] 2026-01-09 07:36:51,192 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 02:37:40] 2026-01-09 07:36:51,192 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 02:37:40] 2026-01-09 07:36:51,192 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 02:37:40] 2026-01-09 07:36:51,192 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 02:37:40] 2026-01-09 07:36:51,192 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 02:37:40] 2026-01-09 07:36:51,192 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 02:37:40] 2026-01-09 07:36:51,192 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 02:37:40] 2026-01-09 07:36:51,192 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 02:37:40] 2026-01-09 07:36:51,192 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 02:37:40] 2026-01-09 07:36:51,192 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 02:37:40] 2026-01-09 07:36:51,192 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 02:37:40] 2026-01-09 07:36:51,192 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 02:37:40] 2026-01-09 07:36:51,192 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 02:37:40] 2026-01-09 07:36:51,193 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 02:37:40] 2026-01-09 07:36:51,193 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 02:37:40] 2026-01-09 07:36:51,193 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 02:37:40] 2026-01-09 07:36:51,193 | INFO     | job 6963160979 has completed (purged errors)
[2026-01-09 02:37:40] 2026-01-09 07:36:51,193 | INFO     | overall cleanup function is called
[2026-01-09 02:37:40] 2026-01-09 07:36:52,202 | INFO     | --- collectZombieJob: --- 10, [64981]
[2026-01-09 02:37:40] 2026-01-09 07:36:52,202 | INFO     | zombie collector waiting for pid 64981
[2026-01-09 02:37:40] 2026-01-09 07:36:52,202 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 02:37:40] 2026-01-09 07:36:52,202 | INFO     | collected zombie processes
[2026-01-09 02:37:40] 2026-01-09 07:36:52,202 | INFO     | will attempt to kill all subprocesses of pid=64981
[2026-01-09 02:37:40] 2026-01-09 07:36:52,508 | INFO     | process IDs to be killed: [64981] (in reverse order)
[2026-01-09 02:37:40] 2026-01-09 07:36:52,682 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 02:37:40] 2026-01-09 07:36:52,682 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 02:37:40] 2026-01-09 07:36:52,698 | INFO     | did not find any defunct processes belonging to 64981
[2026-01-09 02:37:40] 2026-01-09 07:36:52,710 | INFO     | did not find any defunct processes belonging to 64981
[2026-01-09 02:37:40] 2026-01-09 07:36:52,710 | INFO     | ready for new job
[2026-01-09 02:37:40] 2026-01-09 07:36:52,710 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 02:37:40] 2026-01-09 07:36:52,712 | INFO     | ***************************************
[2026-01-09 02:37:40] 2026-01-09 07:36:52,713 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 02:37:40] 2026-01-09 07:36:52,713 | INFO     | ***************************************
[2026-01-09 02:37:40] 2026-01-09 07:36:52,713 | INFO     | 
[2026-01-09 02:37:40] 2026-01-09 07:36:52,716 | INFO     | architecture information:
[2026-01-09 02:37:40] 2026-01-09 07:36:52,716 | INFO     | executing command: cat /etc/os-release
[2026-01-09 02:37:40] 2026-01-09 07:36:52,733 | INFO     | cat /etc/os-release:
[2026-01-09 02:37:40] NAME="CentOS Linux"
[2026-01-09 02:37:40] VERSION="7 (Core)"
[2026-01-09 02:37:40] ID="centos"
[2026-01-09 02:37:40] ID_LIKE="rhel fedora"
[2026-01-09 02:37:40] VERSION_ID="7"
[2026-01-09 02:37:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 02:37:40] ANSI_COLOR="0;31"
[2026-01-09 02:37:40] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 02:37:40] HOME_URL="https://www.centos.org/"
[2026-01-09 02:37:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 02:37:40] 
[2026-01-09 02:37:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 02:37:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 02:37:40] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 02:37:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 02:37:40] 
[2026-01-09 02:37:40] 2026-01-09 07:36:52,733 | INFO     | ***************************************
[2026-01-09 02:37:40] 2026-01-09 07:36:53,236 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-01-09 02:37:40] 2026-01-09 07:36:53,253 | INFO     | sufficient remaining disk space (94308925440 B)
[2026-01-09 02:37:40] 2026-01-09 07:36:53,253 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 02:37:40] 2026-01-09 07:36:53,253 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 02:37:40] 2026-01-09 07:36:53,253 | INFO     | update_server=False
[2026-01-09 02:37:40] 2026-01-09 07:36:53,253 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 02:37:40] 2026-01-09 07:36:53,253 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 02:37:40] 2026-01-09 07:36:53,255 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 02:37:40] 2026-01-09 07:36:53,255 | INFO     | aborting loop
[2026-01-09 02:37:40] 2026-01-09 07:36:53,301 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 02:37:40] 2026-01-09 07:36:53,439 | INFO     | all job control threads have been joined
[2026-01-09 02:37:40] 2026-01-09 07:36:53,901 | INFO     | all data control threads have been joined
[2026-01-09 02:37:40] 2026-01-09 07:36:54,260 | INFO     | [job] job monitor thread has finished
[2026-01-09 02:37:40] 2026-01-09 07:36:54,261 | INFO     | [job] retrieve thread has finished
[2026-01-09 02:37:40] 2026-01-09 07:36:54,333 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 02:37:40] 2026-01-09 07:36:54,410 | INFO     | all payload control threads have been joined
[2026-01-09 02:37:40] 2026-01-09 07:36:54,446 | INFO     | [job] control thread has finished
[2026-01-09 02:37:40] 2026-01-09 07:36:54,579 | INFO     | [payload] validate_post thread has finished
[2026-01-09 02:37:40] 2026-01-09 07:36:54,645 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 02:37:40] 2026-01-09 07:36:54,679 | INFO     | [data] copytool_in thread has finished
[2026-01-09 02:37:40] 2026-01-09 07:36:54,722 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 02:37:40] 2026-01-09 07:36:54,910 | INFO     | [data] control thread has finished
[2026-01-09 02:37:40] 2026-01-09 07:36:55,308 | INFO     | [data] copytool_out thread has finished
[2026-01-09 02:37:40] 2026-01-09 07:36:55,342 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 02:37:40] 2026-01-09 07:36:55,416 | INFO     | [payload] control thread has finished
[2026-01-09 02:37:40] 2026-01-09 07:36:55,532 | INFO     | [job] validate thread has finished
[2026-01-09 02:37:40] 2026-01-09 07:36:55,844 | INFO     | [payload] failed_post thread has finished
[2026-01-09 02:37:40] 2026-01-09 07:36:56,086 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 02:37:40] 2026-01-09 07:36:57,093 | INFO     | [job] queue monitor thread has finished
[2026-01-09 02:37:40] 2026-01-09 07:36:57,264 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 02:37:40] 2026-01-09 07:37:13,877 [wrapper] supervise_pilot (15 min periods counter: 14)
[2026-01-09 02:37:40] 2026-01-09 07:37:24,265 | INFO     | PID=57078 has CPU usage=4.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-09 02:37:40] 2026-01-09 07:37:24,265 | INFO     | .. there are 13 such processes running
[2026-01-09 02:37:40] 2026-01-09 07:37:24,265 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 02:37:40] 2026-01-09 07:37:24,265 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 02:37:40] 2026-01-09 07:37:24,266 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 02:37:40] 2026-01-09 07:37:34,523 | INFO     | [monitor] cgroup control has ended
[2026-01-09 02:37:40] 2026-01-09 07:37:35,276 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139882247190336)>', '<ExcThread(monitor, started 139881758050048)>']
[2026-01-09 02:37:40] 2026-01-09 07:37:35,339 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 02:37:40] 2026-01-09 07:37:35,339 | INFO     | [monitor] control thread has ended
[2026-01-09 02:37:40] 2026-01-09 07:37:40,289 | INFO     | all workflow threads have been joined
[2026-01-09 02:37:40] 2026-01-09 07:37:40,291 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 02:37:40] 2026-01-09 07:37:40,292 | INFO     | traces error code: 0
[2026-01-09 02:37:40] 2026-01-09 07:37:40,292 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 02:37:40] 2026-01-09 07:37:40,559 [wrapper] ==== pilot stdout END ====
[2026-01-09 02:37:40] 2026-01-09 07:37:40,562 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 02:37:40] 2026-01-09 07:37:40,564 [wrapper] pilotpid: 57078
[2026-01-09 02:37:40] 2026-01-09 07:37:40,565 [wrapper] Pilot exit status: 0
[2026-01-09 02:37:40] 2026-01-09 07:37:40,577 [wrapper] pandaids: 6963160979
[2026-01-09 02:37:40] 2026-01-09 07:37:40,684 [wrapper] cleanup supervisor_pilot  401069 57079
[2026-01-09 02:37:40] 2026-01-09 07:37:40,688 [wrapper] Test setup, not cleaning
[2026-01-09 02:37:40] 2026-01-09 07:37:40,692 [wrapper] apfmon messages muted
[2026-01-09 02:37:40] 2026-01-09 07:37:40,695 [wrapper] ==== wrapper stdout END ====
[2026-01-09 02:37:40] 2026-01-09 07:37:40,698 [wrapper] ==== wrapper stderr END ====
[2026-01-09 02:37:40]  *** Error codes and diagnostics ***
[2026-01-09 02:37:40]     "exeErrorCode": 0,
[2026-01-09 02:37:40]     "exeErrorDiag": "",
[2026-01-09 02:37:40]     "pilotErrorCode": 0,
[2026-01-09 02:37:40]     "pilotErrorDiag": "",
[2026-01-09 02:37:40]  *** Listing of results directory ***
[2026-01-09 02:37:40] total 440392
[2026-01-09 02:37:40] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 16:44 pilot3.tar.gz
[2026-01-09 02:37:40] -rwx------. 1 boincer umatlas     36322 Jan  8 16:48 runpilot2-wrapper.sh
[2026-01-09 02:37:40] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 16:50 queuedata.json
[2026-01-09 02:37:40] -rw-r--r--. 1 boincer umatlas       100 Jan  8 23:21 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 02:37:40] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  8 23:21 run_atlas
[2026-01-09 02:37:40] -rw-r--r--. 1 boincer umatlas       105 Jan  8 23:21 job.xml
[2026-01-09 02:37:40] -rw-r--r--. 2 boincer umatlas 224071841 Jan  8 23:21 EVNT.47898824._001268.pool.root.1
[2026-01-09 02:37:40] -rw-r--r--. 2 boincer umatlas     15847 Jan  8 23:21 start_atlas.sh
[2026-01-09 02:37:40] drwxrwx--x. 2 boincer umatlas      4096 Jan  8 23:21 shared
[2026-01-09 02:37:40] -rw-r--r--. 2 boincer umatlas    592397 Jan  8 23:21 input.tar.gz
[2026-01-09 02:37:40] -rw-r--r--. 1 boincer umatlas         0 Jan  8 23:21 boinc_lockfile
[2026-01-09 02:37:40] -rw-r--r--. 1 boincer umatlas      2520 Jan  8 23:21 pandaJob.out
[2026-01-09 02:37:40] -rw-------. 1 boincer umatlas        57 Jan  8 23:21 setup.sh.local
[2026-01-09 02:37:40] -rw-------. 1 boincer umatlas    989771 Jan  8 23:22 agis_schedconf.cvmfs.json
[2026-01-09 02:37:40] drwx------. 5 boincer umatlas      4096 Jan  8 23:22 pilot3
[2026-01-09 02:37:40] -rw-r--r--. 1 boincer umatlas      6903 Jan  9 02:28 init_data.xml
[2026-01-09 02:37:40] -rw-------. 1 boincer umatlas 219036241 Jan  9 02:36 HITS.47898826._032802.pool.root.1
[2026-01-09 02:37:40] -rw-r--r--. 1 boincer umatlas       530 Jan  9 02:36 boinc_task_state.xml
[2026-01-09 02:37:40] -rw-------. 1 boincer umatlas      1032 Jan  9 02:36 memory_monitor_summary.json
[2026-01-09 02:37:40] -rw-------. 1 boincer umatlas        95 Jan  9 02:36 pilot_heartbeat.json
[2026-01-09 02:37:40] -rw-------. 1 boincer umatlas   1516240 Jan  9 02:36 agis_ddmendpoints.agis.ALL.json
[2026-01-09 02:37:40] -rw-------. 1 boincer umatlas    411802 Jan  9 02:36 log.47898826._032802.job.log.tgz.1
[2026-01-09 02:37:40] -rw-------. 1 boincer umatlas      7783 Jan  9 02:36 heartbeat.json
[2026-01-09 02:37:40] -rw-r--r--. 1 boincer umatlas      8192 Jan  9 02:37 boinc_mmap_file
[2026-01-09 02:37:40] -rw-r--r--. 1 boincer umatlas        28 Jan  9 02:37 wrapper_checkpoint.txt
[2026-01-09 02:37:40] -rw-------. 1 boincer umatlas      4822 Jan  9 02:37 pilotlog.txt
[2026-01-09 02:37:40] -rw-------. 1 boincer umatlas   1555194 Jan  9 02:37 log.47898826._032802.job.log.1
[2026-01-09 02:37:40] -rw-------. 1 boincer umatlas       357 Jan  9 02:37 output.list
[2026-01-09 02:37:40] -rw-r--r--. 1 boincer umatlas       620 Jan  9 02:37 runtime_log
[2026-01-09 02:37:40] -rw-------. 1 boincer umatlas   1986560 Jan  9 02:37 result.tar.gz
[2026-01-09 02:37:40] -rw-------. 1 boincer umatlas       656 Jan  9 02:37 8VhLDmZ2Cy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmkMgKDmtuSsFm.diag
[2026-01-09 02:37:40] -rw-r--r--. 1 boincer umatlas      9343 Jan  9 02:37 runtime_log.err
[2026-01-09 02:37:40] -rw-r--r--. 1 boincer umatlas     21357 Jan  9 02:37 stderr.txt
[2026-01-09 02:37:40] HITS file was successfully produced:
[2026-01-09 02:37:40] -rw-------. 1 boincer umatlas 219036241 Jan  9 02:36 shared/HITS.pool.root.1
[2026-01-09 02:37:40]  *** Contents of shared directory: ***
[2026-01-09 02:37:40] total 435272
[2026-01-09 02:37:40] -rw-r--r--. 2 boincer umatlas 224071841 Jan  8 23:21 ATLAS.root_0
[2026-01-09 02:37:40] -rw-r--r--. 2 boincer umatlas     15847 Jan  8 23:21 start_atlas.sh
[2026-01-09 02:37:40] -rw-r--r--. 2 boincer umatlas    592397 Jan  8 23:21 input.tar.gz
[2026-01-09 02:37:40] -rw-------. 1 boincer umatlas 219036241 Jan  9 02:36 HITS.pool.root.1
[2026-01-09 02:37:40] -rw-------. 1 boincer umatlas   1986560 Jan  9 02:37 result.tar.gz
02:37:42 (53395): run_atlas exited; CPU time 46412.449671
02:37:42 (53395): called boinc_finish(0)

</stderr_txt>
]]>

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