Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:03:52 (7329): wrapper (7.7.26015): starting
09:03:52 (7329): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 09:03:52] Arguments: --nthreads 8
[2026-01-09 09:03:52] Threads: 8
[2026-01-09 09:03:52] Checking for CVMFS
[2026-01-09 09:03:52] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 09:03:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 09:03:52] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 09:03:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 09:03:52] 2.11.2.0 12106 35133 97776 154936 2 57 16500769 25165824 0 130560 0 15260477 99.819 8710220 2907 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-09 09:03:52] CVMFS is ok
[2026-01-09 09:03:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 09:03:52] Checking for apptainer binary...
[2026-01-09 09:03:52] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 09:03:52] Running /usr/bin/apptainer --version
[2026-01-09 09:03:53] apptainer version 1.3.2-1.el7
[2026-01-09 09:03:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 09:03:54] cg-vwn435.simple-grid.lan
[2026-01-09 09:03:54] apptainer works
[2026-01-09 09:03:54] Set ATHENA_PROC_NUMBER=8
[2026-01-09 09:03:54] Set ATHENA_CORE_NUMBER=8
[2026-01-09 09:03:54] Starting ATLAS job with PandaID=6963157044
[2026-01-09 09:03:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 11:57:51]  *** The last 200 lines of the pilot log: ***
[2026-01-09 11:57:51] 2026-01-09 10:57:17,647 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 11:57:51] 2026-01-09 10:57:17,648 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2026-01-09 11:57:51] 2026-01-09 10:57:17,650 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6963157044/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 11:57:51] 2026-01-09 10:57:17,651 | INFO     | extracted standard info from prmon json
[2026-01-09 11:57:51] 2026-01-09 10:57:17,651 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 11:57:51] 2026-01-09 10:57:17,651 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 11:57:51] 2026-01-09 10:57:17,651 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 11:57:51] 2026-01-09 10:57:17,652 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 11:57:51] 2026-01-09 10:57:17,656 | INFO     | fitting pss+swap vs Time
[2026-01-09 11:57:51] 2026-01-09 10:57:17,656 | INFO     | sum of square deviations: 1523386702.5
[2026-01-09 11:57:51] 2026-01-09 10:57:17,657 | INFO     | sum of deviations: 16375100439.5
[2026-01-09 11:57:51] 2026-01-09 10:57:17,658 | INFO     | mean x: 1767951037.5
[2026-01-09 11:57:51] 2026-01-09 10:57:17,658 | INFO     | mean y: 2465086.064705882
[2026-01-09 11:57:51] 2026-01-09 10:57:17,658 | INFO     | intersect: -19001492191.27718
[2026-01-09 11:57:51] 2026-01-09 10:57:17,659 | INFO     | chi2: 2.2295735575826297
[2026-01-09 11:57:51] 2026-01-09 10:57:17,659 | INFO     | sum of square deviations: 1392881930.0
[2026-01-09 11:57:51] 2026-01-09 10:57:17,660 | INFO     | sum of deviations: 26893852874.0
[2026-01-09 11:57:51] 2026-01-09 10:57:17,660 | INFO     | mean x: 1767950885.0
[2026-01-09 11:57:51] 2026-01-09 10:57:17,660 | INFO     | mean y: 2477063.5636363635
[2026-01-09 11:57:51] 2026-01-09 10:57:17,661 | INFO     | intersect: -34133231043.18745
[2026-01-09 11:57:51] 2026-01-09 10:57:17,661 | INFO     | chi2: 1.455253134479166
[2026-01-09 11:57:51] 2026-01-09 10:57:17,661 | INFO     | current chi2=1.455253134479166 (change=34.729530248959584 %)
[2026-01-09 11:57:51] 2026-01-09 10:57:17,661 | INFO     | sum of square deviations: 1270051720.0
[2026-01-09 11:57:51] 2026-01-09 10:57:17,663 | INFO     | sum of deviations: 25927926292.0
[2026-01-09 11:57:51] 2026-01-09 10:57:17,663 | INFO     | mean x: 1767950732.5
[2026-01-09 11:57:51] 2026-01-09 10:57:17,663 | INFO     | mean y: 2475863.8
[2026-01-09 11:57:51] 2026-01-09 10:57:17,663 | INFO     | intersect: -36089988370.764725
[2026-01-09 11:57:51] 2026-01-09 10:57:17,663 | INFO     | chi2: 1.4563599135428096
[2026-01-09 11:57:51] 2026-01-09 10:57:17,664 | INFO     | current chi2=1.4563599135428096 (change=-0.0760540580481047 %)
[2026-01-09 11:57:51] 2026-01-09 10:57:17,664 | INFO     | right removable region: 159
[2026-01-09 11:57:51] 2026-01-09 10:57:17,664 | INFO     | sum of square deviations: 1392881930.0
[2026-01-09 11:57:51] 2026-01-09 10:57:17,665 | INFO     | sum of deviations: -8392835182.0
[2026-01-09 11:57:51] 2026-01-09 10:57:17,666 | INFO     | mean x: 1767951190.0
[2026-01-09 11:57:51] 2026-01-09 10:57:17,666 | INFO     | mean y: 2493614.83030303
[2026-01-09 11:57:51] 2026-01-09 10:57:17,666 | INFO     | intersect: 10655315385.223122
[2026-01-09 11:57:51] 2026-01-09 10:57:17,666 | INFO     | chi2: 0.825650996133557
[2026-01-09 11:57:51] 2026-01-09 10:57:17,666 | INFO     | current chi2=0.825650996133557 (change=62.96821007203044 %)
[2026-01-09 11:57:51] 2026-01-09 10:57:17,667 | INFO     | sum of square deviations: 1270051720.0
[2026-01-09 11:57:51] 2026-01-09 10:57:17,668 | INFO     | sum of deviations: -5893114382.500001
[2026-01-09 11:57:51] 2026-01-09 10:57:17,668 | INFO     | mean x: 1767951342.5
[2026-01-09 11:57:51] 2026-01-09 10:57:17,668 | INFO     | mean y: 2490439.85625
[2026-01-09 11:57:51] 2026-01-09 10:57:17,668 | INFO     | intersect: 8205888238.527736
[2026-01-09 11:57:51] 2026-01-09 10:57:17,669 | INFO     | chi2: 0.8013358712496162
[2026-01-09 11:57:51] 2026-01-09 10:57:17,669 | INFO     | current chi2=0.8013358712496162 (change=2.9449640341749816 %)
[2026-01-09 11:57:51] 2026-01-09 10:57:17,669 | INFO     | left removable region: 20
[2026-01-09 11:57:51] 2026-01-09 10:57:17,669 | INFO     | sum of square deviations: 832722590.0
[2026-01-09 11:57:51] 2026-01-09 10:57:17,670 | INFO     | sum of deviations: 2324005816.0000005
[2026-01-09 11:57:51] 2026-01-09 10:57:17,670 | INFO     | mean x: 1767951312.0
[2026-01-09 11:57:51] 2026-01-09 10:57:17,671 | INFO     | mean y: 2506656.3165467624
[2026-01-09 11:57:51] 2026-01-09 10:57:17,671 | INFO     | intersect: -4931584457.37935
[2026-01-09 11:57:51] 2026-01-09 10:57:17,671 | INFO     | chi2: 0.00011169822158481011
[2026-01-09 11:57:51] 2026-01-09 10:57:17,671 | INFO     | current memory leak: 2.79 B/s (using 139 data points, chi2=0.00)
[2026-01-09 11:57:51] 2026-01-09 10:57:17,672 | INFO     | could have reported an average CPU frequency of 1999 MHz (9 samples)
[2026-01-09 11:57:51] 2026-01-09 10:57:17,672 | INFO     | ..............................
[2026-01-09 11:57:51] 2026-01-09 10:57:17,672 | INFO     | . Timing measurements:
[2026-01-09 11:57:51] 2026-01-09 10:57:17,672 | INFO     | . get job = 0 s
[2026-01-09 11:57:51] 2026-01-09 10:57:17,673 | INFO     | . initial setup = 1 s
[2026-01-09 11:57:51] 2026-01-09 10:57:17,673 | INFO     | . payload setup = 7 s
[2026-01-09 11:57:51] 2026-01-09 10:57:17,673 | INFO     | . stage-in = 0 s
[2026-01-09 11:57:51] 2026-01-09 10:57:17,673 | INFO     | . payload execution = 10346 s
[2026-01-09 11:57:51] 2026-01-09 10:57:17,673 | INFO     | . stage-out = 1 s
[2026-01-09 11:57:51] 2026-01-09 10:57:17,673 | INFO     | . log creation = 0 s
[2026-01-09 11:57:51] 2026-01-09 10:57:17,673 | INFO     | ..............................
[2026-01-09 11:57:51] 2026-01-09 10:57:17,944 | INFO     | 
[2026-01-09 11:57:51] 2026-01-09 10:57:17,945 | INFO     | job summary report
[2026-01-09 11:57:51] 2026-01-09 10:57:17,945 | INFO     | --------------------------------------------------
[2026-01-09 11:57:51] 2026-01-09 10:57:17,945 | INFO     | PanDA job id: 6963157044
[2026-01-09 11:57:51] 2026-01-09 10:57:17,945 | INFO     | task id: 47898826
[2026-01-09 11:57:51] 2026-01-09 10:57:17,945 | INFO     | errors: (none)
[2026-01-09 11:57:51] 2026-01-09 10:57:17,945 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 11:57:51] 2026-01-09 10:57:17,945 | INFO     | pilot state: finished 
[2026-01-09 11:57:51] 2026-01-09 10:57:17,945 | INFO     | transexitcode: 0
[2026-01-09 11:57:51] 2026-01-09 10:57:17,946 | INFO     | exeerrorcode: 0
[2026-01-09 11:57:51] 2026-01-09 10:57:17,946 | INFO     | exeerrordiag: 
[2026-01-09 11:57:51] 2026-01-09 10:57:17,946 | INFO     | exitcode: 0
[2026-01-09 11:57:51] 2026-01-09 10:57:17,946 | INFO     | exitmsg: OK
[2026-01-09 11:57:51] 2026-01-09 10:57:17,946 | INFO     | cpuconsumptiontime: 77952 s
[2026-01-09 11:57:51] 2026-01-09 10:57:17,946 | INFO     | nevents: 400
[2026-01-09 11:57:51] 2026-01-09 10:57:17,946 | INFO     | neventsw: 0
[2026-01-09 11:57:51] 2026-01-09 10:57:17,946 | INFO     | pid: 17545
[2026-01-09 11:57:51] 2026-01-09 10:57:17,946 | INFO     | pgrp: 17545
[2026-01-09 11:57:51] 2026-01-09 10:57:17,946 | INFO     | corecount: 8
[2026-01-09 11:57:51] 2026-01-09 10:57:17,947 | INFO     | event service: False
[2026-01-09 11:57:51] 2026-01-09 10:57:17,947 | INFO     | sizes: {0: 2283800, 1: 2283999, 6: 2284261, 12: 2284289, 10357: 2312745, 10358: 2312744, 10359: 2321926, 10362: 2321982, 10370: 2322240}
[2026-01-09 11:57:51] 2026-01-09 10:57:17,947 | INFO     | --------------------------------------------------
[2026-01-09 11:57:51] 2026-01-09 10:57:17,947 | INFO     | 
[2026-01-09 11:57:51] 2026-01-09 10:57:17,947 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2026-01-09 11:57:51] 2026-01-09 10:57:17,974 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 11:57:51] 2026-01-09 10:57:17,975 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 11:57:51] 2026-01-09 10:57:17,975 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 11:57:51] 2026-01-09 10:57:17,975 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 11:57:51] 2026-01-09 10:57:17,975 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 11:57:51] 2026-01-09 10:57:17,975 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 11:57:51] 2026-01-09 10:57:17,975 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 11:57:51] 2026-01-09 10:57:17,976 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 11:57:51] 2026-01-09 10:57:17,976 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 11:57:51] 2026-01-09 10:57:17,976 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 11:57:51] 2026-01-09 10:57:17,976 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 11:57:51] 2026-01-09 10:57:17,976 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 11:57:51] 2026-01-09 10:57:17,976 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 11:57:51] 2026-01-09 10:57:17,976 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 11:57:51] 2026-01-09 10:57:17,976 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 11:57:51] 2026-01-09 10:57:17,976 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 11:57:51] 2026-01-09 10:57:17,976 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 11:57:51] 2026-01-09 10:57:17,976 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 11:57:51] 2026-01-09 10:57:17,977 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 11:57:51] 2026-01-09 10:57:17,977 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 11:57:51] 2026-01-09 10:57:17,977 | INFO     | job 6963157044 has completed (purged errors)
[2026-01-09 11:57:51] 2026-01-09 10:57:17,977 | INFO     | overall cleanup function is called
[2026-01-09 11:57:51] 2026-01-09 10:57:18,985 | INFO     | --- collectZombieJob: --- 10, [17545]
[2026-01-09 11:57:51] 2026-01-09 10:57:18,986 | INFO     | zombie collector waiting for pid 17545
[2026-01-09 11:57:51] 2026-01-09 10:57:18,986 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 11:57:51] 2026-01-09 10:57:18,986 | INFO     | collected zombie processes
[2026-01-09 11:57:51] 2026-01-09 10:57:18,986 | INFO     | will attempt to kill all subprocesses of pid=17545
[2026-01-09 11:57:51] 2026-01-09 10:57:19,053 | INFO     | process IDs to be killed: [17545] (in reverse order)
[2026-01-09 11:57:51] 2026-01-09 10:57:19,110 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 11:57:51] 2026-01-09 10:57:19,110 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 11:57:51] 2026-01-09 10:57:19,112 | INFO     | did not find any defunct processes belonging to 17545
[2026-01-09 11:57:51] 2026-01-09 10:57:19,114 | INFO     | did not find any defunct processes belonging to 17545
[2026-01-09 11:57:51] 2026-01-09 10:57:19,114 | INFO     | ready for new job
[2026-01-09 11:57:51] 2026-01-09 10:57:19,115 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 11:57:51] 2026-01-09 10:57:19,117 | INFO     | ***************************************
[2026-01-09 11:57:51] 2026-01-09 10:57:19,117 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 11:57:51] 2026-01-09 10:57:19,117 | INFO     | ***************************************
[2026-01-09 11:57:51] 2026-01-09 10:57:19,117 | INFO     | 
[2026-01-09 11:57:51] 2026-01-09 10:57:19,118 | INFO     | pilot is running in a VM
[2026-01-09 11:57:51] 2026-01-09 10:57:19,118 | INFO     | architecture information:
[2026-01-09 11:57:51] 2026-01-09 10:57:19,120 | INFO     | executing command: cat /etc/os-release
[2026-01-09 11:57:51] 2026-01-09 10:57:19,139 | INFO     | cat /etc/os-release:
[2026-01-09 11:57:51] NAME="CentOS Linux"
[2026-01-09 11:57:51] VERSION="7 (Core)"
[2026-01-09 11:57:51] ID="centos"
[2026-01-09 11:57:51] ID_LIKE="rhel fedora"
[2026-01-09 11:57:51] VERSION_ID="7"
[2026-01-09 11:57:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 11:57:51] ANSI_COLOR="0;31"
[2026-01-09 11:57:51] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 11:57:51] HOME_URL="https://www.centos.org/"
[2026-01-09 11:57:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 11:57:51] 
[2026-01-09 11:57:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 11:57:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 11:57:51] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 11:57:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 11:57:51] 
[2026-01-09 11:57:51] 2026-01-09 10:57:19,140 | INFO     | ***************************************
[2026-01-09 11:57:51] 2026-01-09 10:57:19,643 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2026-01-09 11:57:51] 2026-01-09 10:57:19,662 | INFO     | sufficient remaining disk space (498123931648 B)
[2026-01-09 11:57:51] 2026-01-09 10:57:19,662 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 11:57:51] 2026-01-09 10:57:19,663 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 11:57:51] 2026-01-09 10:57:19,663 | INFO     | update_server=False
[2026-01-09 11:57:51] 2026-01-09 10:57:19,663 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 11:57:51] 2026-01-09 10:57:19,663 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 11:57:51] 2026-01-09 10:57:19,664 | INFO     | aborting loop
[2026-01-09 11:57:51] 2026-01-09 10:57:19,664 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 11:57:51] 2026-01-09 10:57:19,664 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 11:57:51] 2026-01-09 10:57:19,710 | INFO     | all data control threads have been joined
[2026-01-09 11:57:51] 2026-01-09 10:57:20,643 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 11:57:51] 2026-01-09 10:57:20,669 | INFO     | [job] retrieve thread has finished
[2026-01-09 11:57:51] 2026-01-09 10:57:20,670 | INFO     | [job] job monitor thread has finished
[2026-01-09 11:57:51] 2026-01-09 10:57:20,671 | INFO     | [job] queue monitor thread has finished
[2026-01-09 11:57:51] 2026-01-09 10:57:20,716 | INFO     | [data] control thread has finished
[2026-01-09 11:57:51] 2026-01-09 10:57:20,727 | INFO     | all payload control threads have been joined
[2026-01-09 11:57:51] 2026-01-09 10:57:20,870 | INFO     | [payload] validate_post thread has finished
[2026-01-09 11:57:51] 2026-01-09 10:57:20,952 | INFO     | [payload] failed_post thread has finished
[2026-01-09 11:57:51] 2026-01-09 10:57:21,030 | INFO     | all job control threads have been joined
[2026-01-09 11:57:51] 2026-01-09 10:57:21,080 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 11:57:51] 2026-01-09 10:57:21,532 | INFO     | [job] validate thread has finished
[2026-01-09 11:57:51] 2026-01-09 10:57:21,640 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 11:57:51] 2026-01-09 10:57:21,671 | INFO     | [data] copytool_out thread has finished
[2026-01-09 11:57:51] 2026-01-09 10:57:21,733 | INFO     | [payload] control thread has finished
[2026-01-09 11:57:51] 2026-01-09 10:57:22,036 | INFO     | [job] control thread has finished
[2026-01-09 11:57:51] 2026-01-09 10:57:22,050 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 11:57:51] 2026-01-09 10:57:22,080 | INFO     | [data] copytool_in thread has finished
[2026-01-09 11:57:51] 2026-01-09 10:57:24,650 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 11:57:51] 2026-01-09 10:57:27,173 | INFO     | [monitor] cgroup control has ended
[2026-01-09 11:57:51] 2026-01-09 10:57:30,568 | INFO     | job.realtimelogging is not enabled
[2026-01-09 11:57:51] 2026-01-09 10:57:31,573 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 11:57:51] 2026-01-09 10:57:31,583 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139657717376832)>', '<ExcThread(monitor, started 139657287292672)>']
[2026-01-09 11:57:51] 2026-01-09 10:57:36,609 | INFO     | all workflow threads have been joined
[2026-01-09 11:57:51] 2026-01-09 10:57:36,609 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 11:57:51] 2026-01-09 10:57:36,610 | INFO     | traces error code: 0
[2026-01-09 11:57:51] 2026-01-09 10:57:36,610 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 11:57:51] 2026-01-09 10:57:50,704 | INFO     | PID=11066 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-09 11:57:51] 2026-01-09 10:57:50,705 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 11:57:51] 2026-01-09 10:57:50,706 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 11:57:51] 2026-01-09 10:57:50,706 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 11:57:51] 2026-01-09 10:57:50,706 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 11:57:51] 2026-01-09 10:57:50,706 | CRITICAL | thread 'MainThread' is not alive
[2026-01-09 11:57:51] 2026-01-09 10:57:50,706 | INFO     | [monitor] control thread has ended
[2026-01-09 11:57:51] 2026-01-09 10:57:50,886 [wrapper] ==== pilot stdout END ====
[2026-01-09 11:57:51] 2026-01-09 10:57:50,893 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 11:57:51] 2026-01-09 10:57:50,906 [wrapper] pilotpid: 11066
[2026-01-09 11:57:51] 2026-01-09 10:57:50,912 [wrapper] Pilot exit status: 0
[2026-01-09 11:57:51] 2026-01-09 10:57:50,946 [wrapper] pandaids: 6963157044
[2026-01-09 11:57:51] 2026-01-09 10:57:50,998 [wrapper] cleanup supervisor_pilot  2483 11067
[2026-01-09 11:57:51] 2026-01-09 10:57:51,005 [wrapper] Test setup, not cleaning
[2026-01-09 11:57:51] 2026-01-09 10:57:51,014 [wrapper] apfmon messages muted
[2026-01-09 11:57:51] 2026-01-09 10:57:51,019 [wrapper] ==== wrapper stdout END ====
[2026-01-09 11:57:51] 2026-01-09 10:57:51,026 [wrapper] ==== wrapper stderr END ====
[2026-01-09 11:57:51]  *** Error codes and diagnostics ***
[2026-01-09 11:57:51]     "exeErrorCode": 0,
[2026-01-09 11:57:51]     "exeErrorDiag": "",
[2026-01-09 11:57:51]     "pilotErrorCode": 0,
[2026-01-09 11:57:51]     "pilotErrorDiag": "",
[2026-01-09 11:57:51]  *** Listing of results directory ***
[2026-01-09 11:57:51] total 440164
[2026-01-09 11:57:51] -rw-r--r--. 1 boinc boinc    579449 Jan  8 22:44 pilot3.tar.gz
[2026-01-09 11:57:51] -rwx------. 1 boinc boinc     36322 Jan  8 22:47 runpilot2-wrapper.sh
[2026-01-09 11:57:51] -rw-r--r--. 1 boinc boinc      5112 Jan  8 22:50 queuedata.json
[2026-01-09 11:57:51] -rw-r--r--. 1 boinc boinc       100 Jan  9 09:03 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 11:57:51] -rwxr-xr-x. 1 boinc boinc      7986 Jan  9 09:03 run_atlas
[2026-01-09 11:57:51] -rw-r--r--. 1 boinc boinc       105 Jan  9 09:03 job.xml
[2026-01-09 11:57:51] -rw-r--r--. 2 boinc boinc 222469190 Jan  9 09:03 EVNT.47898824._001222.pool.root.1
[2026-01-09 11:57:51] -rw-r--r--. 1 boinc boinc      6389 Jan  9 09:03 init_data.xml
[2026-01-09 11:57:51] -rw-r--r--. 2 boinc boinc     15847 Jan  9 09:03 start_atlas.sh
[2026-01-09 11:57:51] drwxrwx--x. 2 boinc boinc        68 Jan  9 09:03 shared
[2026-01-09 11:57:51] -rw-r--r--. 2 boinc boinc    592401 Jan  9 09:03 input.tar.gz
[2026-01-09 11:57:51] -rw-r--r--. 1 boinc boinc         0 Jan  9 09:03 boinc_lockfile
[2026-01-09 11:57:51] -rw-r--r--. 1 boinc boinc      2520 Jan  9 09:03 pandaJob.out
[2026-01-09 11:57:51] -rw-------. 1 boinc boinc    989771 Jan  9 09:04 agis_schedconf.cvmfs.json
[2026-01-09 11:57:51] -rw-------. 1 boinc boinc   1516240 Jan  9 09:04 agis_ddmendpoints.agis.ALL.json
[2026-01-09 11:57:51] drwx------. 5 boinc boinc      4096 Jan  9 09:04 pilot3
[2026-01-09 11:57:51] -rw-------. 1 boinc boinc 220754679 Jan  9 11:56 HITS.47898826._032173.pool.root.1
[2026-01-09 11:57:51] -rw-r--r--. 1 boinc boinc       530 Jan  9 11:56 boinc_task_state.xml
[2026-01-09 11:57:51] -rw-------. 1 boinc boinc      1028 Jan  9 11:57 memory_monitor_summary.json
[2026-01-09 11:57:51] -rw-------. 1 boinc boinc    415918 Jan  9 11:57 log.47898826._032173.job.log.tgz.1
[2026-01-09 11:57:51] -rw-------. 1 boinc boinc      7768 Jan  9 11:57 heartbeat.json
[2026-01-09 11:57:51] -rw-r--r--. 1 boinc boinc      8192 Jan  9 11:57 boinc_mmap_file
[2026-01-09 11:57:51] -rw-r--r--. 1 boinc boinc        28 Jan  9 11:57 wrapper_checkpoint.txt
[2026-01-09 11:57:51] -rw-------. 1 boinc boinc        95 Jan  9 11:57 pilot_heartbeat.json
[2026-01-09 11:57:51] -rw-------. 1 boinc boinc       815 Jan  9 11:57 pilotlog.txt
[2026-01-09 11:57:51] -rw-------. 1 boinc boinc   1389133 Jan  9 11:57 log.47898826._032173.job.log.1
[2026-01-09 11:57:51] -rw-------. 1 boinc boinc       357 Jan  9 11:57 output.list
[2026-01-09 11:57:51] -rw-r--r--. 1 boinc boinc       620 Jan  9 11:57 runtime_log
[2026-01-09 11:57:51] -rw-------. 1 boinc boinc   1822720 Jan  9 11:57 result.tar.gz
[2026-01-09 11:57:51] -rw-------. 1 boinc boinc       655 Jan  9 11:57 TTGODmM2Cy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmnLgKDmzjC0im.diag
[2026-01-09 11:57:51] -rw-r--r--. 1 boinc boinc      8817 Jan  9 11:57 runtime_log.err
[2026-01-09 11:57:51] -rw-r--r--. 1 boinc boinc     20684 Jan  9 11:57 stderr.txt
[2026-01-09 11:57:51] HITS file was successfully produced:
[2026-01-09 11:57:51] -rw-------. 1 boinc boinc 220754679 Jan  9 11:56 shared/HITS.pool.root.1
[2026-01-09 11:57:51]  *** Contents of shared directory: ***
[2026-01-09 11:57:51] total 435216
[2026-01-09 11:57:51] -rw-r--r--. 2 boinc boinc 222469190 Jan  9 09:03 ATLAS.root_0
[2026-01-09 11:57:51] -rw-r--r--. 2 boinc boinc     15847 Jan  9 09:03 start_atlas.sh
[2026-01-09 11:57:51] -rw-r--r--. 2 boinc boinc    592401 Jan  9 09:03 input.tar.gz
[2026-01-09 11:57:51] -rw-------. 1 boinc boinc 220754679 Jan  9 11:56 HITS.pool.root.1
[2026-01-09 11:57:51] -rw-------. 1 boinc boinc   1822720 Jan  9 11:57 result.tar.gz
11:57:53 (7329): run_atlas exited; CPU time 78023.618728
11:57:53 (7329): called boinc_finish(0)

</stderr_txt>
]]>

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