Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
23:25:00 (4079): wrapper (7.7.26015): starting
23:25:00 (4079): wrapper: running run_atlas (--nthreads 8)
[2026-01-08 23:25:00] Arguments: --nthreads 8
[2026-01-08 23:25:00] Threads: 8
[2026-01-08 23:25:00] Checking for CVMFS
[2026-01-08 23:25:01] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 23:25:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 23:25:01] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 23:25:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 23:25:01] 2.11.2.0 4329 29219 145164 154931 2 57 6026736 18432001 1833 130560 0 6681513 99.752 1978657 22793 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-08 23:25:01] CVMFS is ok
[2026-01-08 23:25:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-08 23:25:01] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-08 23:25:01] Further information can be found at the LHC@home message board.
[2026-01-08 23:25:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 23:25:01] Checking for apptainer binary...
[2026-01-08 23:25:01] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-08 23:25:01] Running /usr/bin/apptainer --version
[2026-01-08 23:25:01] apptainer version 1.3.2-1.el7
[2026-01-08 23:25:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 23:25:02] c-206-17.aglt2.org
[2026-01-08 23:25:02] apptainer works
[2026-01-08 23:25:02] Set ATHENA_PROC_NUMBER=8
[2026-01-08 23:25:02] Set ATHENA_CORE_NUMBER=8
[2026-01-08 23:25:02] Starting ATLAS job with PandaID=6963157651
[2026-01-08 23:25:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 03:16:41]  *** The last 200 lines of the pilot log: ***
[2026-01-09 03:16:41] 2026-01-09 08:15:34,806 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-09 03:16:41] 2026-01-09 08:15:35,555 | INFO     | monitor loop #1006: job 0:6963157651 is in state 'finished'
[2026-01-09 03:16:41] 2026-01-09 08:15:35,555 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 03:16:41] 2026-01-09 08:15:35,646 | INFO     | time since job start (13822s) is within the limit (349056.0s)
[2026-01-09 03:16:41] 2026-01-09 08:15:36,828 | INFO     | PID=7903 has CPU usage=8.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-09 03:16:41] 2026-01-09 08:15:36,829 | INFO     | .. there are 3 such processes running
[2026-01-09 03:16:41] 2026-01-09 08:15:37,829 | INFO     | time since job start (13824s) is within the limit (349056.0s)
[2026-01-09 03:16:41] 2026-01-09 08:15:38,058 | INFO     | monitor loop #1007: job 0:6963157651 is in state 'finished'
[2026-01-09 03:16:41] 2026-01-09 08:15:38,058 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 03:16:41] 2026-01-09 08:15:38,614 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-09 03:16:41] 2026-01-09 08:15:38,619 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2439.0416666666665
[2026-01-09 03:16:41] 2026-01-09 08:15:38,624 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6963157651/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 03:16:41] 2026-01-09 08:15:38,625 | INFO     | extracted standard info from prmon json
[2026-01-09 03:16:41] 2026-01-09 08:15:38,625 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 03:16:41] 2026-01-09 08:15:38,625 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 03:16:41] 2026-01-09 08:15:38,626 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 03:16:41] 2026-01-09 08:15:38,626 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 03:16:41] 2026-01-09 08:15:38,630 | INFO     | fitting pss+swap vs Time
[2026-01-09 03:16:41] 2026-01-09 08:15:38,630 | INFO     | sum of square deviations: 3579276412.5
[2026-01-09 03:16:41] 2026-01-09 08:15:38,631 | INFO     | sum of deviations: -13603598958.999994
[2026-01-09 03:16:41] 2026-01-09 08:15:38,631 | INFO     | mean x: 1767939601.5
[2026-01-09 03:16:41] 2026-01-09 08:15:38,631 | INFO     | mean y: 2539860.2654867256
[2026-01-09 03:16:41] 2026-01-09 08:15:38,631 | INFO     | intersect: 6721870403.877215
[2026-01-09 03:16:41] 2026-01-09 08:15:38,632 | INFO     | chi2: 1.5926942540585889
[2026-01-09 03:16:41] 2026-01-09 08:15:38,632 | INFO     | sum of square deviations: 3346927870.0
[2026-01-09 03:16:41] 2026-01-09 08:15:38,633 | INFO     | sum of deviations: -13138856856.0
[2026-01-09 03:16:41] 2026-01-09 08:15:38,633 | INFO     | mean x: 1767939449.0
[2026-01-09 03:16:41] 2026-01-09 08:15:38,633 | INFO     | mean y: 2540165.3438914027
[2026-01-09 03:16:41] 2026-01-09 08:15:38,634 | INFO     | intersect: 6942846097.448281
[2026-01-09 03:16:41] 2026-01-09 08:15:38,634 | INFO     | chi2: 1.5919181809615215
[2026-01-09 03:16:41] 2026-01-09 08:15:38,634 | INFO     | current chi2=1.5919181809615215 (change=0.048727060770751625 %)
[2026-01-09 03:16:41] 2026-01-09 08:15:38,634 | INFO     | right removable region: 220
[2026-01-09 03:16:41] 2026-01-09 08:15:38,634 | INFO     | sum of square deviations: 3346927870.0
[2026-01-09 03:16:41] 2026-01-09 08:15:38,636 | INFO     | sum of deviations: -46731345125.0
[2026-01-09 03:16:41] 2026-01-09 08:15:38,636 | INFO     | mean x: 1767939754.0
[2026-01-09 03:16:41] 2026-01-09 08:15:38,636 | INFO     | mean y: 2561377.561085973
[2026-01-09 03:16:41] 2026-01-09 08:15:38,636 | INFO     | intersect: 24687348744.78379
[2026-01-09 03:16:41] 2026-01-09 08:15:38,636 | INFO     | chi2: 0.2082477628219322
[2026-01-09 03:16:41] 2026-01-09 08:15:38,636 | INFO     | current chi2=0.2082477628219322 (change=86.92481232406885 %)
[2026-01-09 03:16:41] 2026-01-09 08:15:38,637 | INFO     | sum of square deviations: 3124858590.0
[2026-01-09 03:16:41] 2026-01-09 08:15:38,638 | INFO     | sum of deviations: -47653915865.49999
[2026-01-09 03:16:41] 2026-01-09 08:15:38,638 | INFO     | mean x: 1767939906.5
[2026-01-09 03:16:41] 2026-01-09 08:15:38,638 | INFO     | mean y: 2561976.4953703703
[2026-01-09 03:16:41] 2026-01-09 08:15:38,638 | INFO     | intersect: 26963545052.40823
[2026-01-09 03:16:41] 2026-01-09 08:15:38,638 | INFO     | chi2: 0.18416268727648236
[2026-01-09 03:16:41] 2026-01-09 08:15:38,639 | INFO     | current chi2=0.18416268727648236 (change=11.565586693022206 %)
[2026-01-09 03:16:41] 2026-01-09 08:15:38,639 | INFO     | left removable region: 20
[2026-01-09 03:16:41] 2026-01-09 08:15:38,639 | INFO     | sum of square deviations: 2480604650.0
[2026-01-09 03:16:41] 2026-01-09 08:15:38,640 | INFO     | sum of deviations: -34793679254.5
[2026-01-09 03:16:41] 2026-01-09 08:15:38,640 | INFO     | mean x: 1767940028.5
[2026-01-09 03:16:41] 2026-01-09 08:15:38,640 | INFO     | mean y: 2554033.525
[2026-01-09 03:16:41] 2026-01-09 08:15:38,640 | INFO     | intersect: 24800192904.68514
[2026-01-09 03:16:41] 2026-01-09 08:15:38,640 | INFO     | chi2: 0.16908352569632332
[2026-01-09 03:16:41] 2026-01-09 08:15:38,641 | INFO     | current memory leak: -14.03 B/s (using 200 data points, chi2=0.17)
[2026-01-09 03:16:41] 2026-01-09 08:15:38,641 | INFO     | could have reported an average CPU frequency of 2554 MHz (11 samples)
[2026-01-09 03:16:41] 2026-01-09 08:15:38,641 | INFO     | ..............................
[2026-01-09 03:16:41] 2026-01-09 08:15:38,641 | INFO     | . Timing measurements:
[2026-01-09 03:16:41] 2026-01-09 08:15:38,641 | INFO     | . get job = 0 s
[2026-01-09 03:16:41] 2026-01-09 08:15:38,641 | INFO     | . initial setup = 2 s
[2026-01-09 03:16:41] 2026-01-09 08:15:38,642 | INFO     | . payload setup = 5 s
[2026-01-09 03:16:41] 2026-01-09 08:15:38,642 | INFO     | . stage-in = 0 s
[2026-01-09 03:16:41] 2026-01-09 08:15:38,642 | INFO     | . payload execution = 13790 s
[2026-01-09 03:16:41] 2026-01-09 08:15:38,642 | INFO     | . stage-out = 2 s
[2026-01-09 03:16:41] 2026-01-09 08:15:38,642 | INFO     | . log creation = 0 s
[2026-01-09 03:16:41] 2026-01-09 08:15:38,642 | INFO     | ..............................
[2026-01-09 03:16:41] 2026-01-09 08:15:39,055 | INFO     | 
[2026-01-09 03:16:41] 2026-01-09 08:15:39,055 | INFO     | job summary report
[2026-01-09 03:16:41] 2026-01-09 08:15:39,056 | INFO     | --------------------------------------------------
[2026-01-09 03:16:41] 2026-01-09 08:15:39,056 | INFO     | PanDA job id: 6963157651
[2026-01-09 03:16:41] 2026-01-09 08:15:39,056 | INFO     | task id: 47898826
[2026-01-09 03:16:41] 2026-01-09 08:15:39,056 | INFO     | errors: (none)
[2026-01-09 03:16:41] 2026-01-09 08:15:39,056 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 03:16:41] 2026-01-09 08:15:39,056 | INFO     | pilot state: finished 
[2026-01-09 03:16:41] 2026-01-09 08:15:39,056 | INFO     | transexitcode: 0
[2026-01-09 03:16:41] 2026-01-09 08:15:39,056 | INFO     | exeerrorcode: 0
[2026-01-09 03:16:41] 2026-01-09 08:15:39,056 | INFO     | exeerrordiag: 
[2026-01-09 03:16:41] 2026-01-09 08:15:39,056 | INFO     | exitcode: 0
[2026-01-09 03:16:41] 2026-01-09 08:15:39,057 | INFO     | exitmsg: OK
[2026-01-09 03:16:41] 2026-01-09 08:15:39,057 | INFO     | cpuconsumptiontime: 104679 s
[2026-01-09 03:16:41] 2026-01-09 08:15:39,057 | INFO     | nevents: 400
[2026-01-09 03:16:41] 2026-01-09 08:15:39,057 | INFO     | neventsw: 0
[2026-01-09 03:16:41] 2026-01-09 08:15:39,057 | INFO     | pid: 14309
[2026-01-09 03:16:41] 2026-01-09 08:15:39,057 | INFO     | pgrp: 14309
[2026-01-09 03:16:41] 2026-01-09 08:15:39,057 | INFO     | corecount: 8
[2026-01-09 03:16:41] 2026-01-09 08:15:39,057 | INFO     | event service: False
[2026-01-09 03:16:41] 2026-01-09 08:15:39,057 | INFO     | sizes: {0: 2283857, 1: 2283999, 4: 2284261, 12: 2284289, 13800: 2314694, 13803: 2323692, 13804: 2323876, 13810: 2324070}
[2026-01-09 03:16:41] 2026-01-09 08:15:39,058 | INFO     | --------------------------------------------------
[2026-01-09 03:16:41] 2026-01-09 08:15:39,058 | INFO     | 
[2026-01-09 03:16:41] 2026-01-09 08:15:39,058 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-09 03:16:41] 2026-01-09 08:15:39,140 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 03:16:41] 2026-01-09 08:15:39,140 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 03:16:41] 2026-01-09 08:15:39,140 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 03:16:41] 2026-01-09 08:15:39,140 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 03:16:41] 2026-01-09 08:15:39,140 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 03:16:41] 2026-01-09 08:15:39,141 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 03:16:41] 2026-01-09 08:15:39,141 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 03:16:41] 2026-01-09 08:15:39,141 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 03:16:41] 2026-01-09 08:15:39,141 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 03:16:41] 2026-01-09 08:15:39,141 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 03:16:41] 2026-01-09 08:15:39,141 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 03:16:41] 2026-01-09 08:15:39,141 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 03:16:41] 2026-01-09 08:15:39,141 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 03:16:41] 2026-01-09 08:15:39,141 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 03:16:41] 2026-01-09 08:15:39,142 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 03:16:41] 2026-01-09 08:15:39,142 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 03:16:41] 2026-01-09 08:15:39,142 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 03:16:41] 2026-01-09 08:15:39,142 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 03:16:41] 2026-01-09 08:15:39,142 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 03:16:41] 2026-01-09 08:15:39,142 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 03:16:41] 2026-01-09 08:15:39,143 | INFO     | job 6963157651 has completed (purged errors)
[2026-01-09 03:16:41] 2026-01-09 08:15:39,143 | INFO     | overall cleanup function is called
[2026-01-09 03:16:41] 2026-01-09 08:15:40,152 | INFO     | --- collectZombieJob: --- 10, [14309]
[2026-01-09 03:16:41] 2026-01-09 08:15:40,152 | INFO     | zombie collector waiting for pid 14309
[2026-01-09 03:16:41] 2026-01-09 08:15:40,152 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 03:16:41] 2026-01-09 08:15:40,152 | INFO     | collected zombie processes
[2026-01-09 03:16:41] 2026-01-09 08:15:40,153 | INFO     | will attempt to kill all subprocesses of pid=14309
[2026-01-09 03:16:41] 2026-01-09 08:15:40,317 | INFO     | process IDs to be killed: [14309] (in reverse order)
[2026-01-09 03:16:41] 2026-01-09 08:15:40,365 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 03:16:41] 2026-01-09 08:15:40,365 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 03:16:41] 2026-01-09 08:15:40,370 | INFO     | did not find any defunct processes belonging to 14309
[2026-01-09 03:16:41] 2026-01-09 08:15:40,375 | INFO     | did not find any defunct processes belonging to 14309
[2026-01-09 03:16:41] 2026-01-09 08:15:40,375 | INFO     | ready for new job
[2026-01-09 03:16:41] 2026-01-09 08:15:40,375 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 03:16:41] 2026-01-09 08:15:40,377 | INFO     | ***************************************
[2026-01-09 03:16:41] 2026-01-09 08:15:40,377 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 03:16:41] 2026-01-09 08:15:40,378 | INFO     | ***************************************
[2026-01-09 03:16:41] 2026-01-09 08:15:40,378 | INFO     | 
[2026-01-09 03:16:41] 2026-01-09 08:15:40,379 | INFO     | architecture information:
[2026-01-09 03:16:41] 2026-01-09 08:15:40,380 | INFO     | executing command: cat /etc/os-release
[2026-01-09 03:16:41] 2026-01-09 08:15:40,394 | INFO     | cat /etc/os-release:
[2026-01-09 03:16:41] NAME="CentOS Linux"
[2026-01-09 03:16:41] VERSION="7 (Core)"
[2026-01-09 03:16:41] ID="centos"
[2026-01-09 03:16:41] ID_LIKE="rhel fedora"
[2026-01-09 03:16:41] VERSION_ID="7"
[2026-01-09 03:16:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 03:16:41] ANSI_COLOR="0;31"
[2026-01-09 03:16:41] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 03:16:41] HOME_URL="https://www.centos.org/"
[2026-01-09 03:16:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 03:16:41] 
[2026-01-09 03:16:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 03:16:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 03:16:41] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 03:16:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 03:16:41] 
[2026-01-09 03:16:41] 2026-01-09 08:15:40,394 | INFO     | ***************************************
[2026-01-09 03:16:41] 2026-01-09 08:15:40,898 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-09 03:16:41] 2026-01-09 08:15:40,920 | INFO     | sufficient remaining disk space (28222423040 B)
[2026-01-09 03:16:41] 2026-01-09 08:15:40,921 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 03:16:41] 2026-01-09 08:15:40,921 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 03:16:41] 2026-01-09 08:15:40,921 | INFO     | update_server=False
[2026-01-09 03:16:41] 2026-01-09 08:15:40,921 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 03:16:41] 2026-01-09 08:15:41,568 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 03:16:41] 2026-01-09 08:15:41,569 | INFO     | aborting loop
[2026-01-09 03:16:41] 2026-01-09 08:15:41,747 | INFO     | all job control threads have been joined
[2026-01-09 03:16:41] 2026-01-09 08:15:41,797 | INFO     | all data control threads have been joined
[2026-01-09 03:16:41] 2026-01-09 08:15:41,867 | INFO     | all payload control threads have been joined
[2026-01-09 03:16:41] 2026-01-09 08:15:41,927 | INFO     | [job] retrieve thread has finished
[2026-01-09 03:16:41] 2026-01-09 08:15:42,205 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 03:16:41] 2026-01-09 08:15:42,289 | INFO     | [payload] validate_post thread has finished
[2026-01-09 03:16:41] 2026-01-09 08:15:42,291 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 03:16:41] 2026-01-09 08:15:42,575 | INFO     | [job] job monitor thread has finished
[2026-01-09 03:16:41] 2026-01-09 08:15:42,675 | INFO     | [payload] failed_post thread has finished
[2026-01-09 03:16:41] 2026-01-09 08:15:42,752 | INFO     | [job] control thread has finished
[2026-01-09 03:16:41] 2026-01-09 08:15:42,802 | INFO     | [data] control thread has finished
[2026-01-09 03:16:41] 2026-01-09 08:15:42,871 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 03:16:41] 2026-01-09 08:15:42,874 | INFO     | [payload] control thread has finished
[2026-01-09 03:16:41] 2026-01-09 08:15:42,907 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 03:16:41] 2026-01-09 08:15:43,041 | INFO     | [data] copytool_in thread has finished
[2026-01-09 03:16:41] 2026-01-09 08:15:43,047 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 03:16:41] 2026-01-09 08:15:43,164 | INFO     | [job] validate thread has finished
[2026-01-09 03:16:41] 2026-01-09 08:15:43,173 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 03:16:41] 2026-01-09 08:15:43,734 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 03:16:41] 2026-01-09 08:15:44,211 | INFO     | [data] copytool_out thread has finished
[2026-01-09 03:16:41] 2026-01-09 08:15:44,740 | INFO     | [job] queue monitor thread has finished
[2026-01-09 03:16:41] 2026-01-09 08:15:46,915 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 03:16:41] 2026-01-09 08:16:11,085 | INFO     | PID=7903 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-09 03:16:41] 2026-01-09 08:16:11,085 | INFO     | .. there are 3 such processes running
[2026-01-09 03:16:41] 2026-01-09 08:16:11,086 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 03:16:41] 2026-01-09 08:16:11,086 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 03:16:41] 2026-01-09 08:16:11,087 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 03:16:41] 2026-01-09 08:16:34,772 | INFO     | [monitor] cgroup control has ended
[2026-01-09 03:16:41] 2026-01-09 08:16:35,778 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140066425526080)>', '<ExcThread(monitor, started 140065862842112)>']
[2026-01-09 03:16:41] 2026-01-09 08:16:36,213 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 03:16:41] 2026-01-09 08:16:36,213 | INFO     | [monitor] control thread has ended
[2026-01-09 03:16:41] 2026-01-09 08:16:40,811 | INFO     | all workflow threads have been joined
[2026-01-09 03:16:41] 2026-01-09 08:16:40,821 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 03:16:41] 2026-01-09 08:16:40,821 | INFO     | traces error code: 0
[2026-01-09 03:16:41] 2026-01-09 08:16:40,822 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 03:16:41] 2026-01-09 08:16:40,957 [wrapper] ==== pilot stdout END ====
[2026-01-09 03:16:41] 2026-01-09 08:16:40,959 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 03:16:41] 2026-01-09 08:16:40,962 [wrapper] pilotpid: 7903
[2026-01-09 03:16:41] 2026-01-09 08:16:40,964 [wrapper] Pilot exit status: 0
[2026-01-09 03:16:41] 2026-01-09 08:16:40,976 [wrapper] pandaids: 6963157651
[2026-01-09 03:16:41] 2026-01-09 08:16:41,010 [wrapper] cleanup supervisor_pilot 32667 7904
[2026-01-09 03:16:41] 2026-01-09 08:16:41,012 [wrapper] Test setup, not cleaning
[2026-01-09 03:16:41] 2026-01-09 08:16:41,014 [wrapper] apfmon messages muted
[2026-01-09 03:16:41] 2026-01-09 08:16:41,017 [wrapper] ==== wrapper stdout END ====
[2026-01-09 03:16:41] 2026-01-09 08:16:41,019 [wrapper] ==== wrapper stderr END ====
[2026-01-09 03:16:41]  *** Error codes and diagnostics ***
[2026-01-09 03:16:41]     "exeErrorCode": 0,
[2026-01-09 03:16:41]     "exeErrorDiag": "",
[2026-01-09 03:16:41]     "pilotErrorCode": 0,
[2026-01-09 03:16:41]     "pilotErrorDiag": "",
[2026-01-09 03:16:41]  *** Listing of results directory ***
[2026-01-09 03:16:41] total 441664
[2026-01-09 03:16:41] -rw-r--r-- 1 boincer umatlas    579449 Jan  8 16:44 pilot3.tar.gz
[2026-01-09 03:16:41] -rwx------ 1 boincer umatlas     36322 Jan  8 16:47 runpilot2-wrapper.sh
[2026-01-09 03:16:41] -rw-r--r-- 1 boincer umatlas      5112 Jan  8 16:50 queuedata.json
[2026-01-09 03:16:41] -rw-r--r-- 1 boincer umatlas       100 Jan  8 23:24 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 03:16:41] -rwxr-xr-x 1 boincer umatlas      7986 Jan  8 23:24 run_atlas
[2026-01-09 03:16:41] -rw-r--r-- 1 boincer umatlas       105 Jan  8 23:24 job.xml
[2026-01-09 03:16:41] -rw-r--r-- 2 boincer umatlas 225367441 Jan  8 23:25 EVNT.47898824._001256.pool.root.1
[2026-01-09 03:16:41] -rw-r--r-- 2 boincer umatlas     15847 Jan  8 23:25 start_atlas.sh
[2026-01-09 03:16:41] drwxrwx--x 2 boincer umatlas      4096 Jan  8 23:25 shared
[2026-01-09 03:16:41] -rw-r--r-- 2 boincer umatlas    592403 Jan  8 23:25 input.tar.gz
[2026-01-09 03:16:41] -rw-r--r-- 1 boincer umatlas         0 Jan  8 23:25 boinc_lockfile
[2026-01-09 03:16:41] -rw-r--r-- 1 boincer umatlas      2520 Jan  8 23:25 pandaJob.out
[2026-01-09 03:16:41] -rw------- 1 boincer umatlas        57 Jan  8 23:25 setup.sh.local
[2026-01-09 03:16:41] -rw------- 1 boincer umatlas    989771 Jan  8 23:25 agis_schedconf.cvmfs.json
[2026-01-09 03:16:41] drwx------ 5 boincer umatlas      4096 Jan  8 23:25 pilot3
[2026-01-09 03:16:41] -rw-r--r-- 1 boincer umatlas      5953 Jan  9 03:13 init_data.xml
[2026-01-09 03:16:41] -rw------- 1 boincer umatlas 218202940 Jan  9 03:14 HITS.47898826._032507.pool.root.1
[2026-01-09 03:16:41] -rw-r--r-- 1 boincer umatlas       531 Jan  9 03:15 boinc_task_state.xml
[2026-01-09 03:16:41] -rw------- 1 boincer umatlas      1054 Jan  9 03:15 memory_monitor_summary.json
[2026-01-09 03:16:41] -rw------- 1 boincer umatlas   1516240 Jan  9 03:15 agis_ddmendpoints.agis.ALL.json
[2026-01-09 03:16:41] -rw------- 1 boincer umatlas    456125 Jan  9 03:15 log.47898826._032507.job.log.tgz.1
[2026-01-09 03:16:41] -rw------- 1 boincer umatlas      7862 Jan  9 03:15 heartbeat.json
[2026-01-09 03:16:41] -rw------- 1 boincer umatlas        95 Jan  9 03:16 pilot_heartbeat.json
[2026-01-09 03:16:41] -rw-r--r-- 1 boincer umatlas      8192 Jan  9 03:16 boinc_mmap_file
[2026-01-09 03:16:41] -rw-r--r-- 1 boincer umatlas        29 Jan  9 03:16 wrapper_checkpoint.txt
[2026-01-09 03:16:41] -rw------- 1 boincer umatlas      4820 Jan  9 03:16 pilotlog.txt
[2026-01-09 03:16:41] -rw------- 1 boincer umatlas   1933250 Jan  9 03:16 log.47898826._032507.job.log.1
[2026-01-09 03:16:41] -rw------- 1 boincer umatlas       357 Jan  9 03:16 output.list
[2026-01-09 03:16:41] -rw-r--r-- 1 boincer umatlas       620 Jan  9 03:16 runtime_log
[2026-01-09 03:16:41] -rw------- 1 boincer umatlas   2406400 Jan  9 03:16 result.tar.gz
[2026-01-09 03:16:41] -rw------- 1 boincer umatlas       663 Jan  9 03:16 WyoLDmO2Cy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm8YlKDmxD9mHo.diag
[2026-01-09 03:16:41] -rw-r--r-- 1 boincer umatlas      9343 Jan  9 03:16 runtime_log.err
[2026-01-09 03:16:41] -rw-r--r-- 1 boincer umatlas     21472 Jan  9 03:16 stderr.txt
[2026-01-09 03:16:41] HITS file was successfully produced:
[2026-01-09 03:16:41] -rw------- 1 boincer umatlas 218202940 Jan  9 03:14 shared/HITS.pool.root.1
[2026-01-09 03:16:41]  *** Contents of shared directory: ***
[2026-01-09 03:16:41] total 436132
[2026-01-09 03:16:41] -rw-r--r-- 2 boincer umatlas 225367441 Jan  8 23:25 ATLAS.root_0
[2026-01-09 03:16:41] -rw-r--r-- 2 boincer umatlas     15847 Jan  8 23:25 start_atlas.sh
[2026-01-09 03:16:41] -rw-r--r-- 2 boincer umatlas    592403 Jan  8 23:25 input.tar.gz
[2026-01-09 03:16:41] -rw------- 1 boincer umatlas 218202940 Jan  9 03:14 HITS.pool.root.1
[2026-01-09 03:16:41] -rw------- 1 boincer umatlas   2406400 Jan  9 03:16 result.tar.gz
03:16:43 (4079): run_atlas exited; CPU time 104952.825068
03:16:43 (4079): called boinc_finish(0)

</stderr_txt>
]]>

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