Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:30:12 (3707): wrapper (7.7.26015): starting
12:30:12 (3707): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 12:30:12] Arguments: --nthreads 8
[2026-01-09 12:30:12] Threads: 8
[2026-01-09 12:30:12] Checking for CVMFS
[2026-01-09 12:30:13] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 12:30:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 12:30:13] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 12:30:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 12:30:13] 2.11.2.0 3018 35334 100868 154942 0 81 17312156 25165825 0 130560 0 15761138 99.826 9951413 3379 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-09 12:30:13] CVMFS is ok
[2026-01-09 12:30:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 12:30:13] Checking for apptainer binary...
[2026-01-09 12:30:13] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 12:30:13] Running /usr/bin/apptainer --version
[2026-01-09 12:30:13] apptainer version 1.3.2-1.el7
[2026-01-09 12:30:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 12:30:14] cg-vwn451.simple-grid.lan
[2026-01-09 12:30:14] apptainer works
[2026-01-09 12:30:14] Set ATHENA_PROC_NUMBER=8
[2026-01-09 12:30:14] Set ATHENA_CORE_NUMBER=8
[2026-01-09 12:30:14] Starting ATLAS job with PandaID=6963156933
[2026-01-09 12:30:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/26 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 15:20:51]  *** The last 200 lines of the pilot log: ***
[2026-01-09 15:20:51] 2026-01-09 14:19:59,593 | INFO     | time since job start (10169s) is within the limit (349056.0s)
[2026-01-09 15:20:51] 2026-01-09 14:20:00,026 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 15:20:51] 2026-01-09 14:20:00,027 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2026-01-09 15:20:51] 2026-01-09 14:20:00,029 | INFO     | using path: /var/lib/boinc/slots/26/PanDA_Pilot-6963156933/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 15:20:51] 2026-01-09 14:20:00,030 | INFO     | extracted standard info from prmon json
[2026-01-09 15:20:51] 2026-01-09 14:20:00,030 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 15:20:51] 2026-01-09 14:20:00,030 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 15:20:51] 2026-01-09 14:20:00,030 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 15:20:51] 2026-01-09 14:20:00,030 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 15:20:51] 2026-01-09 14:20:00,034 | INFO     | fitting pss+swap vs Time
[2026-01-09 15:20:51] 2026-01-09 14:20:00,035 | INFO     | sum of square deviations: 1444149868.0
[2026-01-09 15:20:51] 2026-01-09 14:20:00,036 | INFO     | sum of deviations: -31684255158.999992
[2026-01-09 15:20:51] 2026-01-09 14:20:00,036 | INFO     | mean x: 1767963324.0
[2026-01-09 15:20:51] 2026-01-09 14:20:00,036 | INFO     | mean y: 2565847.832335329
[2026-01-09 15:20:51] 2026-01-09 14:20:00,037 | INFO     | intersect: 38791200123.68284
[2026-01-09 15:20:51] 2026-01-09 14:20:00,037 | INFO     | chi2: 2.5161772043566804
[2026-01-09 15:20:51] 2026-01-09 14:20:00,037 | INFO     | sum of square deviations: 1318277740.5
[2026-01-09 15:20:51] 2026-01-09 14:20:00,038 | INFO     | sum of deviations: -18798894447.500004
[2026-01-09 15:20:51] 2026-01-09 14:20:00,039 | INFO     | mean x: 1767963171.5
[2026-01-09 15:20:51] 2026-01-09 14:20:00,039 | INFO     | mean y: 2581136.598765432
[2026-01-09 15:20:51] 2026-01-09 14:20:00,039 | INFO     | intersect: 25214076428.546955
[2026-01-09 15:20:51] 2026-01-09 14:20:00,039 | INFO     | chi2: 1.7596339744822798
[2026-01-09 15:20:51] 2026-01-09 14:20:00,039 | INFO     | current chi2=1.7596339744822798 (change=30.06716810582618 %)
[2026-01-09 15:20:51] 2026-01-09 14:20:00,040 | INFO     | sum of square deviations: 1199940638.0
[2026-01-09 15:20:51] 2026-01-09 14:20:00,041 | INFO     | sum of deviations: -17101640420.999994
[2026-01-09 15:20:51] 2026-01-09 14:20:00,041 | INFO     | mean x: 1767963019.0
[2026-01-09 15:20:51] 2026-01-09 14:20:00,041 | INFO     | mean y: 2583322.847133758
[2026-01-09 15:20:51] 2026-01-09 14:20:00,041 | INFO     | intersect: 25199719640.32185
[2026-01-09 15:20:51] 2026-01-09 14:20:00,042 | INFO     | chi2: 1.7596564726587929
[2026-01-09 15:20:51] 2026-01-09 14:20:00,042 | INFO     | current chi2=1.7596564726587929 (change=-0.0012785713869692009 %)
[2026-01-09 15:20:51] 2026-01-09 14:20:00,042 | INFO     | right removable region: 156
[2026-01-09 15:20:51] 2026-01-09 14:20:00,042 | INFO     | sum of square deviations: 1318277740.5
[2026-01-09 15:20:51] 2026-01-09 14:20:00,044 | INFO     | sum of deviations: -58309122341.500015
[2026-01-09 15:20:51] 2026-01-09 14:20:00,044 | INFO     | mean x: 1767963476.5
[2026-01-09 15:20:51] 2026-01-09 14:20:00,044 | INFO     | mean y: 2597678.1666666665
[2026-01-09 15:20:51] 2026-01-09 14:20:00,044 | INFO     | intersect: 78201899296.83963
[2026-01-09 15:20:51] 2026-01-09 14:20:00,044 | INFO     | chi2: 0.9697891239914752
[2026-01-09 15:20:51] 2026-01-09 14:20:00,045 | INFO     | current chi2=0.9697891239914752 (change=61.45783682038306 %)
[2026-01-09 15:20:51] 2026-01-09 14:20:00,045 | INFO     | sum of square deviations: 1199940638.0
[2026-01-09 15:20:51] 2026-01-09 14:20:00,046 | INFO     | sum of deviations: -58600396945.00001
[2026-01-09 15:20:51] 2026-01-09 14:20:00,046 | INFO     | mean x: 1767963629.0
[2026-01-09 15:20:51] 2026-01-09 14:20:00,046 | INFO     | mean y: 2597983.9426751593
[2026-01-09 15:20:51] 2026-01-09 14:20:00,046 | INFO     | intersect: 86343011136.71626
[2026-01-09 15:20:51] 2026-01-09 14:20:00,047 | INFO     | chi2: 0.9304311651031875
[2026-01-09 15:20:51] 2026-01-09 14:20:00,047 | INFO     | current chi2=0.9304311651031875 (change=4.0584038235340865 %)
[2026-01-09 15:20:51] 2026-01-09 14:20:00,047 | INFO     | left removable region: 20
[2026-01-09 15:20:51] 2026-01-09 14:20:00,047 | INFO     | sum of square deviations: 779958810.0
[2026-01-09 15:20:51] 2026-01-09 14:20:00,048 | INFO     | sum of deviations: -36706592680.99999
[2026-01-09 15:20:51] 2026-01-09 14:20:00,048 | INFO     | mean x: 1767963598.5
[2026-01-09 15:20:51] 2026-01-09 14:20:00,048 | INFO     | mean y: 2609362.9411764704
[2026-01-09 15:20:51] 2026-01-09 14:20:00,049 | INFO     | intersect: 83206900221.55011
[2026-01-09 15:20:51] 2026-01-09 14:20:00,049 | INFO     | chi2: 0.12886811848846713
[2026-01-09 15:20:51] 2026-01-09 14:20:00,049 | INFO     | current memory leak: -47.06 B/s (using 136 data points, chi2=0.13)
[2026-01-09 15:20:51] 2026-01-09 14:20:00,050 | INFO     | could have reported an average CPU frequency of 1999 MHz (9 samples)
[2026-01-09 15:20:51] 2026-01-09 14:20:00,050 | INFO     | ..............................
[2026-01-09 15:20:51] 2026-01-09 14:20:00,050 | INFO     | . Timing measurements:
[2026-01-09 15:20:51] 2026-01-09 14:20:00,050 | INFO     | . get job = 0 s
[2026-01-09 15:20:51] 2026-01-09 14:20:00,050 | INFO     | . initial setup = 2 s
[2026-01-09 15:20:51] 2026-01-09 14:20:00,050 | INFO     | . payload setup = 7 s
[2026-01-09 15:20:51] 2026-01-09 14:20:00,050 | INFO     | . stage-in = 0 s
[2026-01-09 15:20:51] 2026-01-09 14:20:00,050 | INFO     | . payload execution = 10134 s
[2026-01-09 15:20:51] 2026-01-09 14:20:00,051 | INFO     | . stage-out = 1 s
[2026-01-09 15:20:51] 2026-01-09 14:20:00,051 | INFO     | . log creation = 0 s
[2026-01-09 15:20:51] 2026-01-09 14:20:00,051 | INFO     | ..............................
[2026-01-09 15:20:51] 2026-01-09 14:20:00,165 | INFO     | 
[2026-01-09 15:20:51] 2026-01-09 14:20:00,165 | INFO     | job summary report
[2026-01-09 15:20:51] 2026-01-09 14:20:00,165 | INFO     | --------------------------------------------------
[2026-01-09 15:20:51] 2026-01-09 14:20:00,165 | INFO     | PanDA job id: 6963156933
[2026-01-09 15:20:51] 2026-01-09 14:20:00,166 | INFO     | task id: 47898826
[2026-01-09 15:20:51] 2026-01-09 14:20:00,166 | INFO     | errors: (none)
[2026-01-09 15:20:51] 2026-01-09 14:20:00,166 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 15:20:51] 2026-01-09 14:20:00,166 | INFO     | pilot state: finished 
[2026-01-09 15:20:51] 2026-01-09 14:20:00,166 | INFO     | transexitcode: 0
[2026-01-09 15:20:51] 2026-01-09 14:20:00,166 | INFO     | exeerrorcode: 0
[2026-01-09 15:20:51] 2026-01-09 14:20:00,166 | INFO     | exeerrordiag: 
[2026-01-09 15:20:51] 2026-01-09 14:20:00,166 | INFO     | exitcode: 0
[2026-01-09 15:20:51] 2026-01-09 14:20:00,166 | INFO     | exitmsg: OK
[2026-01-09 15:20:51] 2026-01-09 14:20:00,166 | INFO     | cpuconsumptiontime: 76535 s
[2026-01-09 15:20:51] 2026-01-09 14:20:00,167 | INFO     | nevents: 400
[2026-01-09 15:20:51] 2026-01-09 14:20:00,167 | INFO     | neventsw: 0
[2026-01-09 15:20:51] 2026-01-09 14:20:00,167 | INFO     | pid: 13894
[2026-01-09 15:20:51] 2026-01-09 14:20:00,167 | INFO     | pgrp: 13894
[2026-01-09 15:20:51] 2026-01-09 14:20:00,167 | INFO     | corecount: 8
[2026-01-09 15:20:51] 2026-01-09 14:20:00,167 | INFO     | event service: False
[2026-01-09 15:20:51] 2026-01-09 14:20:00,167 | INFO     | sizes: {0: 2283801, 1: 2284000, 6: 2284262, 12: 2284290, 10144: 2312726, 10146: 2321910, 10153: 2322140}
[2026-01-09 15:20:51] 2026-01-09 14:20:00,167 | INFO     | --------------------------------------------------
[2026-01-09 15:20:51] 2026-01-09 14:20:00,167 | INFO     | 
[2026-01-09 15:20:51] 2026-01-09 14:20:00,168 | INFO     | executing command: ls -lF /var/lib/boinc/slots/26
[2026-01-09 15:20:51] 2026-01-09 14:20:00,191 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 15:20:51] 2026-01-09 14:20:00,192 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 15:20:51] 2026-01-09 14:20:00,192 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 15:20:51] 2026-01-09 14:20:00,192 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 15:20:51] 2026-01-09 14:20:00,192 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 15:20:51] 2026-01-09 14:20:00,192 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 15:20:51] 2026-01-09 14:20:00,192 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 15:20:51] 2026-01-09 14:20:00,192 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 15:20:51] 2026-01-09 14:20:00,192 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 15:20:51] 2026-01-09 14:20:00,193 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 15:20:51] 2026-01-09 14:20:00,193 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 15:20:51] 2026-01-09 14:20:00,193 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 15:20:51] 2026-01-09 14:20:00,193 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 15:20:51] 2026-01-09 14:20:00,193 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 15:20:51] 2026-01-09 14:20:00,193 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 15:20:51] 2026-01-09 14:20:00,193 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 15:20:51] 2026-01-09 14:20:00,193 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 15:20:51] 2026-01-09 14:20:00,194 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 15:20:51] 2026-01-09 14:20:00,194 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 15:20:51] 2026-01-09 14:20:00,194 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 15:20:51] 2026-01-09 14:20:00,194 | INFO     | job 6963156933 has completed (purged errors)
[2026-01-09 15:20:51] 2026-01-09 14:20:00,194 | INFO     | overall cleanup function is called
[2026-01-09 15:20:51] 2026-01-09 14:20:01,202 | INFO     | --- collectZombieJob: --- 10, [13894]
[2026-01-09 15:20:51] 2026-01-09 14:20:01,203 | INFO     | zombie collector waiting for pid 13894
[2026-01-09 15:20:51] 2026-01-09 14:20:01,203 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 15:20:51] 2026-01-09 14:20:01,203 | INFO     | collected zombie processes
[2026-01-09 15:20:51] 2026-01-09 14:20:01,203 | INFO     | will attempt to kill all subprocesses of pid=13894
[2026-01-09 15:20:51] 2026-01-09 14:20:01,265 | INFO     | process IDs to be killed: [13894] (in reverse order)
[2026-01-09 15:20:51] 2026-01-09 14:20:01,310 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 15:20:51] 2026-01-09 14:20:01,310 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 15:20:51] 2026-01-09 14:20:01,312 | INFO     | did not find any defunct processes belonging to 13894
[2026-01-09 15:20:51] 2026-01-09 14:20:01,314 | INFO     | did not find any defunct processes belonging to 13894
[2026-01-09 15:20:51] 2026-01-09 14:20:01,314 | INFO     | ready for new job
[2026-01-09 15:20:51] 2026-01-09 14:20:01,314 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 15:20:51] 2026-01-09 14:20:01,316 | INFO     | ***************************************
[2026-01-09 15:20:51] 2026-01-09 14:20:01,316 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 15:20:51] 2026-01-09 14:20:01,316 | INFO     | ***************************************
[2026-01-09 15:20:51] 2026-01-09 14:20:01,316 | INFO     | 
[2026-01-09 15:20:51] 2026-01-09 14:20:01,317 | INFO     | pilot is running in a VM
[2026-01-09 15:20:51] 2026-01-09 14:20:01,317 | INFO     | architecture information:
[2026-01-09 15:20:51] 2026-01-09 14:20:01,318 | INFO     | executing command: cat /etc/os-release
[2026-01-09 15:20:51] 2026-01-09 14:20:01,335 | INFO     | cat /etc/os-release:
[2026-01-09 15:20:51] NAME="CentOS Linux"
[2026-01-09 15:20:51] VERSION="7 (Core)"
[2026-01-09 15:20:51] ID="centos"
[2026-01-09 15:20:51] ID_LIKE="rhel fedora"
[2026-01-09 15:20:51] VERSION_ID="7"
[2026-01-09 15:20:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 15:20:51] ANSI_COLOR="0;31"
[2026-01-09 15:20:51] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 15:20:51] HOME_URL="https://www.centos.org/"
[2026-01-09 15:20:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 15:20:51] 
[2026-01-09 15:20:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 15:20:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 15:20:51] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 15:20:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 15:20:51] 
[2026-01-09 15:20:51] 2026-01-09 14:20:01,335 | INFO     | ***************************************
[2026-01-09 15:20:51] 2026-01-09 14:20:01,838 | INFO     | executing command: df -mP /var/lib/boinc/slots/26
[2026-01-09 15:20:51] 2026-01-09 14:20:01,857 | INFO     | sufficient remaining disk space (498283315200 B)
[2026-01-09 15:20:51] 2026-01-09 14:20:01,857 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 15:20:51] 2026-01-09 14:20:01,858 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 15:20:51] 2026-01-09 14:20:01,858 | INFO     | update_server=False
[2026-01-09 15:20:51] 2026-01-09 14:20:01,858 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 15:20:51] 2026-01-09 14:20:01,858 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 15:20:51] 2026-01-09 14:20:01,859 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 15:20:51] 2026-01-09 14:20:01,895 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 15:20:51] 2026-01-09 14:20:01,895 | INFO     | aborting loop
[2026-01-09 15:20:51] 2026-01-09 14:20:02,555 | INFO     | all data control threads have been joined
[2026-01-09 15:20:51] 2026-01-09 14:20:02,864 | INFO     | [job] retrieve thread has finished
[2026-01-09 15:20:51] 2026-01-09 14:20:02,865 | INFO     | [job] queue monitor thread has finished
[2026-01-09 15:20:51] 2026-01-09 14:20:02,878 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 15:20:51] 2026-01-09 14:20:02,901 | INFO     | [job] job monitor thread has finished
[2026-01-09 15:20:51] 2026-01-09 14:20:03,062 | INFO     | all payload control threads have been joined
[2026-01-09 15:20:51] 2026-01-09 14:20:03,063 | INFO     | [data] copytool_in thread has finished
[2026-01-09 15:20:51] 2026-01-09 14:20:03,091 | INFO     | [payload] failed_post thread has finished
[2026-01-09 15:20:51] 2026-01-09 14:20:03,164 | INFO     | [job] validate thread has finished
[2026-01-09 15:20:51] 2026-01-09 14:20:03,244 | INFO     | all job control threads have been joined
[2026-01-09 15:20:51] 2026-01-09 14:20:03,561 | INFO     | [data] control thread has finished
[2026-01-09 15:20:51] 2026-01-09 14:20:03,587 | INFO     | [payload] validate_post thread has finished
[2026-01-09 15:20:51] 2026-01-09 14:20:03,761 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 15:20:51] 2026-01-09 14:20:03,864 | INFO     | [data] copytool_out thread has finished
[2026-01-09 15:20:51] 2026-01-09 14:20:03,878 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 15:20:51] 2026-01-09 14:20:04,067 | INFO     | [payload] control thread has finished
[2026-01-09 15:20:51] 2026-01-09 14:20:04,249 | INFO     | [job] control thread has finished
[2026-01-09 15:20:51] 2026-01-09 14:20:04,272 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 15:20:51] 2026-01-09 14:20:07,768 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 15:20:51] 2026-01-09 14:20:12,616 | INFO     | job.realtimelogging is not enabled
[2026-01-09 15:20:51] 2026-01-09 14:20:13,621 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 15:20:51] 2026-01-09 14:20:32,682 | INFO     | PID=7436 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-09 15:20:51] 2026-01-09 14:20:32,682 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 15:20:51] 2026-01-09 14:20:32,682 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 15:20:51] 2026-01-09 14:20:32,683 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 15:20:51] 2026-01-09 14:20:46,414 | INFO     | [monitor] cgroup control has ended
[2026-01-09 15:20:51] 2026-01-09 14:20:46,571 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139904671786816)>', '<ExcThread(monitor, started 139903929153280)>']
[2026-01-09 15:20:51] 2026-01-09 14:20:46,751 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 15:20:51] 2026-01-09 14:20:46,751 | INFO     | [monitor] control thread has ended
[2026-01-09 15:20:51] 2026-01-09 14:20:51,597 | INFO     | all workflow threads have been joined
[2026-01-09 15:20:51] 2026-01-09 14:20:51,597 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 15:20:51] 2026-01-09 14:20:51,597 | INFO     | traces error code: 0
[2026-01-09 15:20:51] 2026-01-09 14:20:51,598 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 15:20:51] 2026-01-09 14:20:51,733 [wrapper] ==== pilot stdout END ====
[2026-01-09 15:20:51] 2026-01-09 14:20:51,736 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 15:20:51] 2026-01-09 14:20:51,740 [wrapper] pilotpid: 7436
[2026-01-09 15:20:51] 2026-01-09 14:20:51,744 [wrapper] Pilot exit status: 0
[2026-01-09 15:20:51] 2026-01-09 14:20:51,757 [wrapper] pandaids: 6963156933
[2026-01-09 15:20:51] 2026-01-09 14:20:51,791 [wrapper] cleanup supervisor_pilot 31710 7437
[2026-01-09 15:20:51] 2026-01-09 14:20:51,795 [wrapper] Test setup, not cleaning
[2026-01-09 15:20:51] 2026-01-09 14:20:51,799 [wrapper] apfmon messages muted
[2026-01-09 15:20:51] 2026-01-09 14:20:51,803 [wrapper] ==== wrapper stdout END ====
[2026-01-09 15:20:51] 2026-01-09 14:20:51,806 [wrapper] ==== wrapper stderr END ====
[2026-01-09 15:20:51]  *** Error codes and diagnostics ***
[2026-01-09 15:20:51]     "exeErrorCode": 0,
[2026-01-09 15:20:51]     "exeErrorDiag": "",
[2026-01-09 15:20:51]     "pilotErrorCode": 0,
[2026-01-09 15:20:51]     "pilotErrorDiag": "",
[2026-01-09 15:20:51]  *** Listing of results directory ***
[2026-01-09 15:20:51] total 443964
[2026-01-09 15:20:51] -rw-r--r--. 1 boinc boinc    579449 Jan  8 22:44 pilot3.tar.gz
[2026-01-09 15:20:51] -rwx------. 1 boinc boinc     36322 Jan  8 22:47 runpilot2-wrapper.sh
[2026-01-09 15:20:51] -rw-r--r--. 1 boinc boinc      5112 Jan  8 22:50 queuedata.json
[2026-01-09 15:20:51] -rw-r--r--. 1 boinc boinc       100 Jan  9 12:30 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 15:20:51] -rwxr-xr-x. 1 boinc boinc      7986 Jan  9 12:30 run_atlas
[2026-01-09 15:20:51] -rw-r--r--. 1 boinc boinc       105 Jan  9 12:30 job.xml
[2026-01-09 15:20:51] -rw-r--r--. 1 boinc boinc      6391 Jan  9 12:30 init_data.xml
[2026-01-09 15:20:51] -rw-r--r--. 2 boinc boinc 225455109 Jan  9 12:30 EVNT.47898824._001218.pool.root.1
[2026-01-09 15:20:51] -rw-r--r--. 2 boinc boinc     15847 Jan  9 12:30 start_atlas.sh
[2026-01-09 15:20:51] drwxrwx--x. 2 boinc boinc        68 Jan  9 12:30 shared
[2026-01-09 15:20:51] -rw-r--r--. 2 boinc boinc    592403 Jan  9 12:30 input.tar.gz
[2026-01-09 15:20:51] -rw-r--r--. 1 boinc boinc         0 Jan  9 12:30 boinc_lockfile
[2026-01-09 15:20:51] -rw-r--r--. 1 boinc boinc      2520 Jan  9 12:30 pandaJob.out
[2026-01-09 15:20:51] -rw-------. 1 boinc boinc    989377 Jan  9 12:30 agis_schedconf.cvmfs.json
[2026-01-09 15:20:51] -rw-------. 1 boinc boinc   1516240 Jan  9 12:30 agis_ddmendpoints.agis.ALL.json
[2026-01-09 15:20:51] drwx------. 5 boinc boinc      4096 Jan  9 12:30 pilot3
[2026-01-09 15:20:51] -rw-------. 1 boinc boinc 221740276 Jan  9 15:19 HITS.47898826._032062.pool.root.1
[2026-01-09 15:20:51] -rw-r--r--. 1 boinc boinc       531 Jan  9 15:19 boinc_task_state.xml
[2026-01-09 15:20:51] -rw-------. 1 boinc boinc        95 Jan  9 15:19 pilot_heartbeat.json
[2026-01-09 15:20:51] -rw-------. 1 boinc boinc      1018 Jan  9 15:19 memory_monitor_summary.json
[2026-01-09 15:20:51] -rw-------. 1 boinc boinc    398669 Jan  9 15:19 log.47898826._032062.job.log.tgz.1
[2026-01-09 15:20:51] -rw-------. 1 boinc boinc      7781 Jan  9 15:20 heartbeat.json
[2026-01-09 15:20:51] -rw-r--r--. 1 boinc boinc      8192 Jan  9 15:20 boinc_mmap_file
[2026-01-09 15:20:51] -rw-r--r--. 1 boinc boinc        28 Jan  9 15:20 wrapper_checkpoint.txt
[2026-01-09 15:20:51] -rw-------. 1 boinc boinc      4881 Jan  9 15:20 pilotlog.txt
[2026-01-09 15:20:51] -rw-------. 1 boinc boinc   1365279 Jan  9 15:20 log.47898826._032062.job.log.1
[2026-01-09 15:20:51] -rw-------. 1 boinc boinc       357 Jan  9 15:20 output.list
[2026-01-09 15:20:51] -rw-r--r--. 1 boinc boinc       620 Jan  9 15:20 runtime_log
[2026-01-09 15:20:51] -rw-------. 1 boinc boinc   1781760 Jan  9 15:20 result.tar.gz
[2026-01-09 15:20:51] -rw-r--r--. 1 boinc boinc      8833 Jan  9 15:20 runtime_log.err
[2026-01-09 15:20:51] -rw-------. 1 boinc boinc       656 Jan  9 15:20 bhTMDmM2Cy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm1KgKDmun49Do.diag
[2026-01-09 15:20:51] -rw-r--r--. 1 boinc boinc     20722 Jan  9 15:20 stderr.txt
[2026-01-09 15:20:51] HITS file was successfully produced:
[2026-01-09 15:20:51] -rw-------. 1 boinc boinc 221740276 Jan  9 15:19 shared/HITS.pool.root.1
[2026-01-09 15:20:51]  *** Contents of shared directory: ***
[2026-01-09 15:20:51] total 439052
[2026-01-09 15:20:51] -rw-r--r--. 2 boinc boinc 225455109 Jan  9 12:30 ATLAS.root_0
[2026-01-09 15:20:51] -rw-r--r--. 2 boinc boinc     15847 Jan  9 12:30 start_atlas.sh
[2026-01-09 15:20:51] -rw-r--r--. 2 boinc boinc    592403 Jan  9 12:30 input.tar.gz
[2026-01-09 15:20:51] -rw-------. 1 boinc boinc 221740276 Jan  9 15:19 HITS.pool.root.1
[2026-01-09 15:20:51] -rw-------. 1 boinc boinc   1781760 Jan  9 15:20 result.tar.gz
15:20:53 (3707): run_atlas exited; CPU time 76604.543009
15:20:53 (3707): called boinc_finish(0)

</stderr_txt>
]]>

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