Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:01:23 (1354878): wrapper (7.7.26015): starting
00:01:23 (1354878): wrapper: running run_atlas (--nthreads 11)
[2026-01-09 00:01:23] Arguments: --nthreads 11
[2026-01-09 00:01:23] Threads: 11
[2026-01-09 00:01:23] Checking for CVMFS
[2026-01-09 00:01:24] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 00:01:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 00:01:24] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 00:01:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 00:01:26] 2.13.3.0 290515 95721 572824 154931 2 309 37395220 40960000 8743 16776704 0 301565251 99.611 312153168 39332 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-09 00:01:26] CVMFS is ok
[2026-01-09 00:01:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 00:01:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 00:01:26] Further information can be found at the LHC@home message board.
[2026-01-09 00:01:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 00:01:26] Checking for apptainer binary...
[2026-01-09 00:01:26] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 00:01:26] Running /usr/bin/apptainer --version
[2026-01-09 00:01:26] apptainer version 1.4.5-2.el9
[2026-01-09 00:01:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 00:01:27] c6-5-37-4.aglt2.org
[2026-01-09 00:01:27] apptainer works
[2026-01-09 00:01:27] Set ATHENA_PROC_NUMBER=11
[2026-01-09 00:01:27] Set ATHENA_CORE_NUMBER=11
[2026-01-09 00:01:27] Starting ATLAS job with PandaID=6963156899
[2026-01-09 00:01:27] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 12:05:56]  *** The last 200 lines of the pilot log: ***
[2026-01-09 12:05:56] 2026-01-09 17:05:05,898 | INFO     | extracted standard info from prmon json
[2026-01-09 12:05:56] 2026-01-09 17:05:05,899 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 12:05:56] 2026-01-09 17:05:05,899 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 12:05:56] 2026-01-09 17:05:05,902 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 12:05:56] 2026-01-09 17:05:05,902 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 12:05:56] 2026-01-09 17:05:05,921 | INFO     | fitting pss+swap vs Time
[2026-01-09 12:05:56] 2026-01-09 17:05:05,922 | INFO     | sum of square deviations: 109106851630.40804
[2026-01-09 12:05:56] 2026-01-09 17:05:05,967 | INFO     | sum of deviations: 666443806901.5413
[2026-01-09 12:05:56] 2026-01-09 17:05:05,967 | INFO     | mean x: 1767956708.2181304
[2026-01-09 12:05:56] 2026-01-09 17:05:05,967 | INFO     | mean y: 2602834.3796033994
[2026-01-09 12:05:56] 2026-01-09 17:05:05,967 | INFO     | intersect: -10796387159.880592
[2026-01-09 12:05:56] 2026-01-09 17:05:05,968 | INFO     | chi2: 10.134938577504377
[2026-01-09 12:05:56] 2026-01-09 17:05:05,973 | INFO     | sum of square deviations: 106805037520.3111
[2026-01-09 12:05:56] 2026-01-09 17:05:05,992 | INFO     | sum of deviations: 803992150101.6461
[2026-01-09 12:05:56] 2026-01-09 17:05:05,993 | INFO     | mean x: 1767956555.7232525
[2026-01-09 12:05:56] 2026-01-09 17:05:05,993 | INFO     | mean y: 2611919.8744650497
[2026-01-09 12:05:56] 2026-01-09 17:05:05,993 | INFO     | intersect: -13305966266.355062
[2026-01-09 12:05:56] 2026-01-09 17:05:05,994 | INFO     | chi2: 8.064904573935957
[2026-01-09 12:05:56] 2026-01-09 17:05:05,994 | INFO     | current chi2=8.064904573935957 (change=20.424731612711405 %)
[2026-01-09 12:05:56] 2026-01-09 17:05:05,994 | INFO     | right removable region: 700
[2026-01-09 12:05:56] 2026-01-09 17:05:06,002 | INFO     | monitor loop #2464: job 0:6963156899 is in state 'finished'
[2026-01-09 12:05:56] 2026-01-09 17:05:06,002 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 12:05:56] 2026-01-09 17:05:06,003 | INFO     | sum of square deviations: 106804728250.31111
[2026-01-09 12:05:56] 2026-01-09 17:05:06,024 | INFO     | sum of deviations: 420306636223.0177
[2026-01-09 12:05:56] 2026-01-09 17:05:06,024 | INFO     | mean x: 1767956860.7232525
[2026-01-09 12:05:56] 2026-01-09 17:05:06,024 | INFO     | mean y: 2619134.3609129814
[2026-01-09 12:05:56] 2026-01-09 17:05:06,024 | INFO     | intersect: -6954788213.528031
[2026-01-09 12:05:56] 2026-01-09 17:05:06,025 | INFO     | chi2: 6.079591386603126
[2026-01-09 12:05:56] 2026-01-09 17:05:06,025 | INFO     | current chi2=6.079591386603126 (change=40.01353496016783 %)
[2026-01-09 12:05:56] 2026-01-09 17:05:06,030 | INFO     | sum of square deviations: 104535210132.67654
[2026-01-09 12:05:56] 2026-01-09 17:05:06,058 | INFO     | sum of deviations: 218210866710.67667
[2026-01-09 12:05:56] 2026-01-09 17:05:06,059 | INFO     | mean x: 1767957013.2284484
[2026-01-09 12:05:56] 2026-01-09 17:05:06,059 | INFO     | mean y: 2632711.8951149425
[2026-01-09 12:05:56] 2026-01-09 17:05:06,059 | INFO     | intersect: -3687869576.034052
[2026-01-09 12:05:56] 2026-01-09 17:05:06,061 | INFO     | chi2: 3.4577320839260723
[2026-01-09 12:05:56] 2026-01-09 17:05:06,061 | INFO     | current chi2=3.4577320839260723 (change=43.12558420380906 %)
[2026-01-09 12:05:56] 2026-01-09 17:05:06,062 | INFO     | sum of square deviations: 102298149383.93324
[2026-01-09 12:05:56] 2026-01-09 17:05:06,087 | INFO     | sum of deviations: 113532698372.80743
[2026-01-09 12:05:56] 2026-01-09 17:05:06,087 | INFO     | mean x: 1767957165.730825
[2026-01-09 12:05:56] 2026-01-09 17:05:06,087 | INFO     | mean y: 2639841.004341534
[2026-01-09 12:05:56] 2026-01-09 17:05:06,087 | INFO     | intersect: -1959477253.4079854
[2026-01-09 12:05:56] 2026-01-09 17:05:06,088 | INFO     | chi2: 2.7373742276742243
[2026-01-09 12:05:56] 2026-01-09 17:05:06,088 | INFO     | current chi2=2.7373742276742243 (change=20.83324672841395 %)
[2026-01-09 12:05:56] 2026-01-09 17:05:06,088 | INFO     | left removable region: 30
[2026-01-09 12:05:56] 2026-01-09 17:05:06,089 | INFO     | sum of square deviations: 93251314368.21039
[2026-01-09 12:05:56] 2026-01-09 17:05:06,110 | INFO     | sum of deviations: 88912968453.57013
[2026-01-09 12:05:56] 2026-01-09 17:05:06,110 | INFO     | mean x: 1767957440.2343283
[2026-01-09 12:05:56] 2026-01-09 17:05:06,111 | INFO     | mean y: 2660941.2447761195
[2026-01-09 12:05:56] 2026-01-09 17:05:06,111 | INFO     | intersect: -1683045530.302797
[2026-01-09 12:05:56] 2026-01-09 17:05:06,111 | INFO     | chi2: 0.045088268886931245
[2026-01-09 12:05:56] 2026-01-09 17:05:06,112 | INFO     | current memory leak: 0.95 B/s (using 670 data points, chi2=0.05)
[2026-01-09 12:05:56] 2026-01-09 17:05:06,112 | INFO     | could have reported an average CPU frequency of 3024 MHz (27 samples)
[2026-01-09 12:05:56] 2026-01-09 17:05:06,113 | INFO     | ..............................
[2026-01-09 12:05:56] 2026-01-09 17:05:06,113 | INFO     | . Timing measurements:
[2026-01-09 12:05:56] 2026-01-09 17:05:06,113 | INFO     | . get job = 2 s
[2026-01-09 12:05:56] 2026-01-09 17:05:06,113 | INFO     | . initial setup = 10 s
[2026-01-09 12:05:56] 2026-01-09 17:05:06,113 | INFO     | . payload setup = 63 s
[2026-01-09 12:05:56] 2026-01-09 17:05:06,113 | INFO     | . stage-in = 1 s
[2026-01-09 12:05:56] 2026-01-09 17:05:06,113 | INFO     | . payload execution = 43077 s
[2026-01-09 12:05:56] 2026-01-09 17:05:06,113 | INFO     | . stage-out = 8 s
[2026-01-09 12:05:56] 2026-01-09 17:05:06,125 | INFO     | . log creation = 2 s
[2026-01-09 12:05:56] 2026-01-09 17:05:06,125 | INFO     | ..............................
[2026-01-09 12:05:56] 2026-01-09 17:05:06,773 | INFO     | PID=1362465 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 12:05:56] 2026-01-09 17:05:06,773 | INFO     | .. there are 10 such processes running
[2026-01-09 12:05:56] 2026-01-09 17:05:06,836 | INFO     | 
[2026-01-09 12:05:56] 2026-01-09 17:05:06,836 | INFO     | job summary report
[2026-01-09 12:05:56] 2026-01-09 17:05:06,836 | INFO     | --------------------------------------------------
[2026-01-09 12:05:56] 2026-01-09 17:05:06,837 | INFO     | PanDA job id: 6963156899
[2026-01-09 12:05:56] 2026-01-09 17:05:06,837 | INFO     | task id: 47898826
[2026-01-09 12:05:56] 2026-01-09 17:05:06,837 | INFO     | errors: (none)
[2026-01-09 12:05:56] 2026-01-09 17:05:06,837 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 12:05:56] 2026-01-09 17:05:06,837 | INFO     | pilot state: finished 
[2026-01-09 12:05:56] 2026-01-09 17:05:06,837 | INFO     | transexitcode: 0
[2026-01-09 12:05:56] 2026-01-09 17:05:06,837 | INFO     | exeerrorcode: 0
[2026-01-09 12:05:56] 2026-01-09 17:05:06,837 | INFO     | exeerrordiag: 
[2026-01-09 12:05:56] 2026-01-09 17:05:06,837 | INFO     | exitcode: 0
[2026-01-09 12:05:56] 2026-01-09 17:05:06,837 | INFO     | exitmsg: OK
[2026-01-09 12:05:56] 2026-01-09 17:05:06,837 | INFO     | cpuconsumptiontime: 53617 s
[2026-01-09 12:05:56] 2026-01-09 17:05:06,837 | INFO     | nevents: 400
[2026-01-09 12:05:56] 2026-01-09 17:05:06,837 | INFO     | neventsw: 0
[2026-01-09 12:05:56] 2026-01-09 17:05:06,837 | INFO     | pid: 1383037
[2026-01-09 12:05:56] 2026-01-09 17:05:06,837 | INFO     | pgrp: 1383037
[2026-01-09 12:05:56] 2026-01-09 17:05:06,838 | INFO     | corecount: 11
[2026-01-09 12:05:56] 2026-01-09 17:05:06,838 | INFO     | event service: False
[2026-01-09 12:05:56] 2026-01-09 17:05:06,838 | INFO     | sizes: {0: 2283744, 1: 2283800, 2: 2284027, 3: 2284027, 4: 2284055, 16: 2284083, 28: 2284239, 38: 2284267, 46: 2284557, 51: 2284585, 43146: 2327850, 43147: 2328129
[2026-01-09 12:05:56] 2026-01-09 17:05:06,838 | INFO     | --------------------------------------------------
[2026-01-09 12:05:56] 2026-01-09 17:05:06,838 | INFO     | 
[2026-01-09 12:05:56] 2026-01-09 17:05:06,838 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2026-01-09 12:05:56] 2026-01-09 17:05:06,926 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 12:05:56] 2026-01-09 17:05:06,927 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 12:05:56] 2026-01-09 17:05:06,927 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 12:05:56] 2026-01-09 17:05:06,927 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 12:05:56] 2026-01-09 17:05:06,927 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 12:05:56] 2026-01-09 17:05:06,927 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 12:05:56] 2026-01-09 17:05:06,927 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 12:05:56] 2026-01-09 17:05:06,927 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 12:05:56] 2026-01-09 17:05:06,927 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 12:05:56] 2026-01-09 17:05:06,927 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 12:05:56] 2026-01-09 17:05:06,927 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 12:05:56] 2026-01-09 17:05:06,928 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 12:05:56] 2026-01-09 17:05:06,928 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 12:05:56] 2026-01-09 17:05:06,928 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 12:05:56] 2026-01-09 17:05:06,928 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 12:05:56] 2026-01-09 17:05:06,928 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 12:05:56] 2026-01-09 17:05:06,928 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 12:05:56] 2026-01-09 17:05:06,928 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 12:05:56] 2026-01-09 17:05:06,928 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 12:05:56] 2026-01-09 17:05:06,928 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 12:05:56] 2026-01-09 17:05:06,928 | INFO     | job 6963156899 has completed (purged errors)
[2026-01-09 12:05:56] 2026-01-09 17:05:06,929 | INFO     | overall cleanup function is called
[2026-01-09 12:05:56] 2026-01-09 17:05:07,953 | INFO     | --- collectZombieJob: --- 10, [1383037]
[2026-01-09 12:05:56] 2026-01-09 17:05:07,953 | INFO     | zombie collector waiting for pid 1383037
[2026-01-09 12:05:56] 2026-01-09 17:05:07,953 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 12:05:56] 2026-01-09 17:05:07,953 | INFO     | collected zombie processes
[2026-01-09 12:05:56] 2026-01-09 17:05:07,954 | INFO     | will attempt to kill all subprocesses of pid=1383037
[2026-01-09 12:05:56] 2026-01-09 17:05:10,150 | INFO     | process IDs to be killed: [1383037] (in reverse order)
[2026-01-09 12:05:56] 2026-01-09 17:05:10,982 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 12:05:56] 2026-01-09 17:05:10,982 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 12:05:56] 2026-01-09 17:05:11,085 | INFO     | did not find any defunct processes belonging to 1383037
[2026-01-09 12:05:56] 2026-01-09 17:05:11,209 | INFO     | did not find any defunct processes belonging to 1383037
[2026-01-09 12:05:56] 2026-01-09 17:05:11,210 | INFO     | ready for new job
[2026-01-09 12:05:56] 2026-01-09 17:05:11,210 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 12:05:56] 2026-01-09 17:05:11,238 | INFO     | ***************************************
[2026-01-09 12:05:56] 2026-01-09 17:05:11,264 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 12:05:56] 2026-01-09 17:05:11,264 | INFO     | ***************************************
[2026-01-09 12:05:56] 2026-01-09 17:05:11,265 | INFO     | 
[2026-01-09 12:05:56] 2026-01-09 17:05:11,267 | INFO     | architecture information:
[2026-01-09 12:05:56] 2026-01-09 17:05:11,304 | INFO     | executing command: cat /etc/os-release
[2026-01-09 12:05:56] 2026-01-09 17:05:11,487 | INFO     | cat /etc/os-release:
[2026-01-09 12:05:56] NAME="CentOS Linux"
[2026-01-09 12:05:56] VERSION="7 (Core)"
[2026-01-09 12:05:56] ID="centos"
[2026-01-09 12:05:56] ID_LIKE="rhel fedora"
[2026-01-09 12:05:56] VERSION_ID="7"
[2026-01-09 12:05:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 12:05:56] ANSI_COLOR="0;31"
[2026-01-09 12:05:56] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 12:05:56] HOME_URL="https://www.centos.org/"
[2026-01-09 12:05:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 12:05:56] 
[2026-01-09 12:05:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 12:05:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 12:05:56] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 12:05:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 12:05:56] 
[2026-01-09 12:05:56] 2026-01-09 17:05:11,487 | INFO     | ***************************************
[2026-01-09 12:05:56] 2026-01-09 17:05:11,990 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2026-01-09 12:05:56] 2026-01-09 17:05:12,209 | INFO     | sufficient remaining disk space (73909927936 B)
[2026-01-09 12:05:56] 2026-01-09 17:05:12,209 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 12:05:56] 2026-01-09 17:05:12,209 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 12:05:56] 2026-01-09 17:05:12,209 | INFO     | update_server=False
[2026-01-09 12:05:56] 2026-01-09 17:05:12,209 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 12:05:56] 2026-01-09 17:05:12,210 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 12:05:56] 2026-01-09 17:05:12,210 | INFO     | aborting loop
[2026-01-09 12:05:56] 2026-01-09 17:05:12,214 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 12:05:56] 2026-01-09 17:05:12,310 | INFO     | all data control threads have been joined
[2026-01-09 12:05:56] 2026-01-09 17:05:12,858 | INFO     | all job control threads have been joined
[2026-01-09 12:05:56] 2026-01-09 17:05:12,904 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 12:05:56] 2026-01-09 17:05:13,211 | INFO     | all payload control threads have been joined
[2026-01-09 12:05:56] 2026-01-09 17:05:13,211 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 12:05:56] 2026-01-09 17:05:13,215 | INFO     | [job] retrieve thread has finished
[2026-01-09 12:05:56] 2026-01-09 17:05:13,216 | INFO     | [job] job monitor thread has finished
[2026-01-09 12:05:56] 2026-01-09 17:05:13,220 | INFO     | [job] queue monitor thread has finished
[2026-01-09 12:05:56] 2026-01-09 17:05:13,226 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 12:05:56] 2026-01-09 17:05:13,282 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 12:05:56] 2026-01-09 17:05:13,288 | INFO     | [data] copytool_in thread has finished
[2026-01-09 12:05:56] 2026-01-09 17:05:13,316 | INFO     | [data] control thread has finished
[2026-01-09 12:05:56] 2026-01-09 17:05:13,379 | INFO     | [job] validate thread has finished
[2026-01-09 12:05:56] 2026-01-09 17:05:13,513 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 12:05:56] 2026-01-09 17:05:13,877 | INFO     | [job] control thread has finished
[2026-01-09 12:05:56] 2026-01-09 17:05:14,059 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 12:05:56] 2026-01-09 17:05:14,217 | INFO     | [payload] control thread has finished
[2026-01-09 12:05:56] 2026-01-09 17:05:14,245 | INFO     | [payload] failed_post thread has finished
[2026-01-09 12:05:56] 2026-01-09 17:05:14,736 | INFO     | [payload] validate_post thread has finished
[2026-01-09 12:05:56] 2026-01-09 17:05:14,919 | INFO     | [data] copytool_out thread has finished
[2026-01-09 12:05:56] 2026-01-09 17:05:17,220 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 12:05:56] 2026-01-09 17:05:37,870 | INFO     | 43313s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2026-01-09 12:05:56] 2026-01-09 17:05:41,848 | INFO     | PID=1362465 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 12:05:56] 2026-01-09 17:05:41,849 | INFO     | .. there are 10 such processes running
[2026-01-09 12:05:56] 2026-01-09 17:05:41,849 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 12:05:56] 2026-01-09 17:05:41,849 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 12:05:56] 2026-01-09 17:05:41,850 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 12:05:56] 2026-01-09 17:05:46,632 | INFO     | [monitor] cgroup control has ended
[2026-01-09 12:05:56] 2026-01-09 17:05:47,467 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140457961174848)>', '<ExcThread(monitor, started 140457073948416)>']
[2026-01-09 12:05:56] 2026-01-09 17:05:47,922 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 12:05:56] 2026-01-09 17:05:47,922 | INFO     | [monitor] control thread has ended
[2026-01-09 12:05:56] 2026-01-09 17:05:52,493 | INFO     | all workflow threads have been joined
[2026-01-09 12:05:56] 2026-01-09 17:05:52,493 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 12:05:56] 2026-01-09 17:05:52,494 | INFO     | traces error code: 0
[2026-01-09 12:05:56] 2026-01-09 17:05:52,494 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 12:05:56] 2026-01-09 17:05:54,562 [wrapper] ==== pilot stdout END ====
[2026-01-09 12:05:56] 2026-01-09 17:05:54,681 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 12:05:56] 2026-01-09 17:05:54,716 [wrapper] pilotpid: 1362465
[2026-01-09 12:05:56] 2026-01-09 17:05:54,758 [wrapper] Pilot exit status: 0
[2026-01-09 12:05:56] 2026-01-09 17:05:54,908 [wrapper] pandaids: 6963156899
[2026-01-09 12:05:56] 2026-01-09 17:05:55,711 [wrapper] cleanup supervisor_pilot 2900962 1362466
[2026-01-09 12:05:56] 2026-01-09 17:05:55,754 [wrapper] Test setup, not cleaning
[2026-01-09 12:05:56] 2026-01-09 17:05:55,917 [wrapper] apfmon messages muted
[2026-01-09 12:05:56] 2026-01-09 17:05:55,959 [wrapper] ==== wrapper stdout END ====
[2026-01-09 12:05:56] 2026-01-09 17:05:56,018 [wrapper] ==== wrapper stderr END ====
[2026-01-09 12:05:56]  *** Error codes and diagnostics ***
[2026-01-09 12:05:56]     "exeErrorCode": 0,
[2026-01-09 12:05:56]     "exeErrorDiag": "",
[2026-01-09 12:05:56]     "pilotErrorCode": 0,
[2026-01-09 12:05:56]     "pilotErrorDiag": "",
[2026-01-09 12:05:56]  *** Listing of results directory ***
[2026-01-09 12:05:56] total 451216
[2026-01-09 12:05:56] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 16:44 pilot3.tar.gz
[2026-01-09 12:05:56] -rwx------. 1 boincer umatlas     36322 Jan  8 16:47 runpilot2-wrapper.sh
[2026-01-09 12:05:56] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 16:50 queuedata.json
[2026-01-09 12:05:56] -rw-r--r--. 1 boincer umatlas       100 Jan  9 00:01 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 12:05:56] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 00:01 run_atlas
[2026-01-09 12:05:56] -rw-r--r--. 1 boincer umatlas       105 Jan  9 00:01 job.xml
[2026-01-09 12:05:56] -rw-r--r--. 2 boincer umatlas 224497817 Jan  9 00:01 EVNT.47898824._001217.pool.root.1
[2026-01-09 12:05:56] -rw-r--r--. 2 boincer umatlas    592404 Jan  9 00:01 input.tar.gz
[2026-01-09 12:05:56] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 00:01 start_atlas.sh
[2026-01-09 12:05:56] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 00:01 shared
[2026-01-09 12:05:56] -rw-r--r--. 1 boincer umatlas         0 Jan  9 00:01 boinc_lockfile
[2026-01-09 12:05:56] -rw-r--r--. 1 boincer umatlas      2520 Jan  9 00:01 pandaJob.out
[2026-01-09 12:05:56] -rw-------. 1 boincer umatlas        57 Jan  9 00:01 setup.sh.local
[2026-01-09 12:05:56] -rw-------. 1 boincer umatlas    989771 Jan  9 00:03 agis_schedconf.cvmfs.json
[2026-01-09 12:05:56] drwx------. 5 boincer umatlas      4096 Jan  9 00:03 pilot3
[2026-01-09 12:05:56] -rw-------. 1 boincer umatlas 221464557 Jan  9 12:00 HITS.47898826._032048.pool.root.1
[2026-01-09 12:05:56] -rw-r--r--. 1 boincer umatlas       531 Jan  9 12:00 boinc_task_state.xml
[2026-01-09 12:05:56] -rw-r--r--. 1 boincer umatlas      6841 Jan  9 12:00 init_data.xml
[2026-01-09 12:05:56] -rw-------. 1 boincer umatlas      1037 Jan  9 12:03 memory_monitor_summary.json
[2026-01-09 12:05:56] -rw-------. 1 boincer umatlas   1516240 Jan  9 12:04 agis_ddmendpoints.agis.ALL.json
[2026-01-09 12:05:56] -rw-------. 1 boincer umatlas    873387 Jan  9 12:04 log.47898826._032048.job.log.tgz.1
[2026-01-09 12:05:56] -rw-------. 1 boincer umatlas      7824 Jan  9 12:05 heartbeat.json
[2026-01-09 12:05:56] -rw-------. 1 boincer umatlas        95 Jan  9 12:05 pilot_heartbeat.json
[2026-01-09 12:05:56] -rw-r--r--. 1 boincer umatlas        28 Jan  9 12:05 wrapper_checkpoint.txt
[2026-01-09 12:05:56] -rw-------. 1 boincer umatlas      4940 Jan  9 12:05 pilotlog.txt
[2026-01-09 12:05:56] -rw-------. 1 boincer umatlas   5207430 Jan  9 12:05 log.47898826._032048.job.log.1
[2026-01-09 12:05:56] -rw-------. 1 boincer umatlas       357 Jan  9 12:05 output.list
[2026-01-09 12:05:56] -rw-r--r--. 1 boincer umatlas       620 Jan  9 12:05 runtime_log
[2026-01-09 12:05:56] -rw-------. 1 boincer umatlas   6103040 Jan  9 12:05 result.tar.gz
[2026-01-09 12:05:56] -rw-r--r--. 1 boincer umatlas      8192 Jan  9 12:05 boinc_mmap_file
[2026-01-09 12:05:56] -rw-------. 1 boincer umatlas       658 Jan  9 12:05 ULNMDmM2Cy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmwKgKDmHBVddn.diag
[2026-01-09 12:05:56] -rw-r--r--. 1 boincer umatlas      9350 Jan  9 12:05 runtime_log.err
[2026-01-09 12:05:56] -rw-r--r--. 1 boincer umatlas     21074 Jan  9 12:05 stderr.txt
[2026-01-09 12:05:56] HITS file was successfully produced:
[2026-01-09 12:05:56] -rw-------. 1 boincer umatlas 221464557 Jan  9 12:00 shared/HITS.pool.root.1
[2026-01-09 12:05:56]  *** Contents of shared directory: ***
[2026-01-09 12:05:56] total 442076
[2026-01-09 12:05:56] -rw-r--r--. 2 boincer umatlas 224497817 Jan  9 00:01 ATLAS.root_0
[2026-01-09 12:05:56] -rw-r--r--. 2 boincer umatlas    592404 Jan  9 00:01 input.tar.gz
[2026-01-09 12:05:56] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 00:01 start_atlas.sh
[2026-01-09 12:05:56] -rw-------. 1 boincer umatlas 221464557 Jan  9 12:00 HITS.pool.root.1
[2026-01-09 12:05:56] -rw-------. 1 boincer umatlas   6103040 Jan  9 12:05 result.tar.gz
12:06:18 (1354878): run_atlas exited; CPU time 54830.300843
12:06:18 (1354878): called boinc_finish(0)

</stderr_txt>
]]>

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