Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:49:44 (20952): wrapper (7.7.26015): starting
08:49:44 (20952): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 08:49:44] Arguments: --nthreads 8
[2026-01-09 08:49:44] Threads: 8
[2026-01-09 08:49:44] Checking for CVMFS
[2026-01-09 08:49:44] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 08:49:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 08:49:45] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 08:49:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 08:49:45] 2.11.2.0 25293 35119 127828 154936 3 57 13233615 25165824 0 130560 0 13249178 99.780 9171570 3487 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-09 08:49:45] CVMFS is ok
[2026-01-09 08:49:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 08:49:45] Checking for apptainer binary...
[2026-01-09 08:49:45] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 08:49:45] Running /usr/bin/apptainer --version
[2026-01-09 08:49:45] apptainer version 1.3.2-1.el7
[2026-01-09 08:49:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 08:49:46] cg-vwn372.simple-grid.lan
[2026-01-09 08:49:46] apptainer works
[2026-01-09 08:49:46] Set ATHENA_PROC_NUMBER=8
[2026-01-09 08:49:46] Set ATHENA_CORE_NUMBER=8
[2026-01-09 08:49:46] Starting ATLAS job with PandaID=6963162113
[2026-01-09 08:49:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 11:36:23]  *** The last 200 lines of the pilot log: ***
[2026-01-09 11:36:23] 2026-01-09 10:35:31,022 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 11:36:23] 2026-01-09 10:35:31,701 | INFO     | time since job start (9931s) is within the limit (349056.0s)
[2026-01-09 11:36:23] 2026-01-09 10:35:32,996 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 11:36:23] 2026-01-09 10:35:32,997 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2026-01-09 11:36:23] 2026-01-09 10:35:32,999 | INFO     | using path: /var/lib/boinc/slots/11/PanDA_Pilot-6963162113/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 11:36:23] 2026-01-09 10:35:32,999 | INFO     | extracted standard info from prmon json
[2026-01-09 11:36:23] 2026-01-09 10:35:33,000 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 11:36:23] 2026-01-09 10:35:33,000 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 11:36:23] 2026-01-09 10:35:33,000 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 11:36:23] 2026-01-09 10:35:33,000 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 11:36:23] 2026-01-09 10:35:33,004 | INFO     | fitting pss+swap vs Time
[2026-01-09 11:36:23] 2026-01-09 10:35:33,005 | INFO     | sum of square deviations: 1342841922.0
[2026-01-09 11:36:23] 2026-01-09 10:35:33,006 | INFO     | sum of deviations: -1972063692.999998
[2026-01-09 11:36:23] 2026-01-09 10:35:33,006 | INFO     | mean x: 1767949971.0
[2026-01-09 11:36:23] 2026-01-09 10:35:33,006 | INFO     | mean y: 2489770.392638037
[2026-01-09 11:36:23] 2026-01-09 10:35:33,006 | INFO     | intersect: 2598856395.331459
[2026-01-09 11:36:23] 2026-01-09 10:35:33,007 | INFO     | chi2: 2.35444425665802
[2026-01-09 11:36:23] 2026-01-09 10:35:33,007 | INFO     | sum of square deviations: 1223016419.5
[2026-01-09 11:36:23] 2026-01-09 10:35:33,008 | INFO     | sum of deviations: 8734000953.49999
[2026-01-09 11:36:23] 2026-01-09 10:35:33,008 | INFO     | mean x: 1767949818.5
[2026-01-09 11:36:23] 2026-01-09 10:35:33,008 | INFO     | mean y: 2503056.018987342
[2026-01-09 11:36:23] 2026-01-09 10:35:33,009 | INFO     | intersect: -12623063661.091743
[2026-01-09 11:36:23] 2026-01-09 10:35:33,009 | INFO     | chi2: 1.59454868396404
[2026-01-09 11:36:23] 2026-01-09 10:35:33,009 | INFO     | current chi2=1.59454868396404 (change=32.274944312022164 %)
[2026-01-09 11:36:23] 2026-01-09 10:35:33,009 | INFO     | sum of square deviations: 1110539892.0
[2026-01-09 11:36:23] 2026-01-09 10:35:33,010 | INFO     | sum of deviations: 8496781439.000002
[2026-01-09 11:36:23] 2026-01-09 10:35:33,010 | INFO     | mean x: 1767949666.0
[2026-01-09 11:36:23] 2026-01-09 10:35:33,011 | INFO     | mean y: 2502734.294117647
[2026-01-09 11:36:23] 2026-01-09 10:35:33,011 | INFO     | intersect: -13524144993.867865
[2026-01-09 11:36:23] 2026-01-09 10:35:33,011 | INFO     | chi2: 1.5959828826518692
[2026-01-09 11:36:23] 2026-01-09 10:35:33,011 | INFO     | current chi2=1.5959828826518692 (change=-0.08994386325438651 %)
[2026-01-09 11:36:23] 2026-01-09 10:35:33,011 | INFO     | right removable region: 152
[2026-01-09 11:36:23] 2026-01-09 10:35:33,012 | INFO     | sum of square deviations: 1223016419.5
[2026-01-09 11:36:23] 2026-01-09 10:35:33,013 | INFO     | sum of deviations: -26082804590.5
[2026-01-09 11:36:23] 2026-01-09 10:35:33,013 | INFO     | mean x: 1767950123.5
[2026-01-09 11:36:23] 2026-01-09 10:35:33,013 | INFO     | mean y: 2520006.841772152
[2026-01-09 11:36:23] 2026-01-09 10:35:33,013 | INFO     | intersect: 37706917807.03896
[2026-01-09 11:36:23] 2026-01-09 10:35:33,014 | INFO     | chi2: 0.912947537580127
[2026-01-09 11:36:23] 2026-01-09 10:35:33,014 | INFO     | current chi2=0.912947537580127 (change=61.224499794444206 %)
[2026-01-09 11:36:23] 2026-01-09 10:35:33,014 | INFO     | sum of square deviations: 1110539892.0
[2026-01-09 11:36:23] 2026-01-09 10:35:33,015 | INFO     | sum of deviations: -22772407211.0
[2026-01-09 11:36:23] 2026-01-09 10:35:33,015 | INFO     | mean x: 1767950276.0
[2026-01-09 11:36:23] 2026-01-09 10:35:33,015 | INFO     | mean y: 2515459.1437908495
[2026-01-09 11:36:23] 2026-01-09 10:35:33,015 | INFO     | intersect: 36255588314.87498
[2026-01-09 11:36:23] 2026-01-09 10:35:33,016 | INFO     | chi2: 0.899027646873454
[2026-01-09 11:36:23] 2026-01-09 10:35:33,016 | INFO     | current chi2=0.899027646873454 (change=1.5247196726735543 %)
[2026-01-09 11:36:23] 2026-01-09 10:35:33,016 | INFO     | left removable region: 20
[2026-01-09 11:36:23] 2026-01-09 10:35:33,016 | INFO     | sum of square deviations: 713140813.0
[2026-01-09 11:36:23] 2026-01-09 10:35:33,017 | INFO     | sum of deviations: -1174144104.0
[2026-01-09 11:36:23] 2026-01-09 10:35:33,017 | INFO     | mean x: 1767950245.5
[2026-01-09 11:36:23] 2026-01-09 10:35:33,017 | INFO     | mean y: 2512933.984848485
[2026-01-09 11:36:23] 2026-01-09 10:35:33,017 | INFO     | intersect: 2913338284.432401
[2026-01-09 11:36:23] 2026-01-09 10:35:33,018 | INFO     | chi2: 0.03676216265185319
[2026-01-09 11:36:23] 2026-01-09 10:35:33,018 | INFO     | current memory leak: -1.65 B/s (using 132 data points, chi2=0.04)
[2026-01-09 11:36:23] 2026-01-09 10:35:33,018 | INFO     | could have reported an average CPU frequency of 1999 MHz (9 samples)
[2026-01-09 11:36:23] 2026-01-09 10:35:33,019 | INFO     | ..............................
[2026-01-09 11:36:23] 2026-01-09 10:35:33,019 | INFO     | . Timing measurements:
[2026-01-09 11:36:23] 2026-01-09 10:35:33,019 | INFO     | . get job = 0 s
[2026-01-09 11:36:23] 2026-01-09 10:35:33,019 | INFO     | . initial setup = 2 s
[2026-01-09 11:36:23] 2026-01-09 10:35:33,019 | INFO     | . payload setup = 6 s
[2026-01-09 11:36:23] 2026-01-09 10:35:33,019 | INFO     | . stage-in = 0 s
[2026-01-09 11:36:23] 2026-01-09 10:35:33,019 | INFO     | . payload execution = 9898 s
[2026-01-09 11:36:23] 2026-01-09 10:35:33,019 | INFO     | . stage-out = 0 s
[2026-01-09 11:36:23] 2026-01-09 10:35:33,020 | INFO     | . log creation = 0 s
[2026-01-09 11:36:23] 2026-01-09 10:35:33,020 | INFO     | ..............................
[2026-01-09 11:36:23] 2026-01-09 10:35:33,136 | INFO     | 
[2026-01-09 11:36:23] 2026-01-09 10:35:33,136 | INFO     | job summary report
[2026-01-09 11:36:23] 2026-01-09 10:35:33,136 | INFO     | --------------------------------------------------
[2026-01-09 11:36:23] 2026-01-09 10:35:33,136 | INFO     | PanDA job id: 6963162113
[2026-01-09 11:36:23] 2026-01-09 10:35:33,136 | INFO     | task id: 47898826
[2026-01-09 11:36:23] 2026-01-09 10:35:33,136 | INFO     | errors: (none)
[2026-01-09 11:36:23] 2026-01-09 10:35:33,137 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 11:36:23] 2026-01-09 10:35:33,137 | INFO     | pilot state: finished 
[2026-01-09 11:36:23] 2026-01-09 10:35:33,137 | INFO     | transexitcode: 0
[2026-01-09 11:36:23] 2026-01-09 10:35:33,137 | INFO     | exeerrorcode: 0
[2026-01-09 11:36:23] 2026-01-09 10:35:33,137 | INFO     | exeerrordiag: 
[2026-01-09 11:36:23] 2026-01-09 10:35:33,137 | INFO     | exitcode: 0
[2026-01-09 11:36:23] 2026-01-09 10:35:33,137 | INFO     | exitmsg: OK
[2026-01-09 11:36:23] 2026-01-09 10:35:33,137 | INFO     | cpuconsumptiontime: 75598 s
[2026-01-09 11:36:23] 2026-01-09 10:35:33,137 | INFO     | nevents: 400
[2026-01-09 11:36:23] 2026-01-09 10:35:33,137 | INFO     | neventsw: 0
[2026-01-09 11:36:23] 2026-01-09 10:35:33,137 | INFO     | pid: 31183
[2026-01-09 11:36:23] 2026-01-09 10:35:33,138 | INFO     | pgrp: 31183
[2026-01-09 11:36:23] 2026-01-09 10:35:33,138 | INFO     | corecount: 8
[2026-01-09 11:36:23] 2026-01-09 10:35:33,138 | INFO     | event service: False
[2026-01-09 11:36:23] 2026-01-09 10:35:33,138 | INFO     | sizes: {0: 2283800, 1: 2283999, 6: 2284261, 12: 2284289, 9909: 2312777, 9911: 2321961, 9917: 2322163}
[2026-01-09 11:36:23] 2026-01-09 10:35:33,138 | INFO     | --------------------------------------------------
[2026-01-09 11:36:23] 2026-01-09 10:35:33,138 | INFO     | 
[2026-01-09 11:36:23] 2026-01-09 10:35:33,138 | INFO     | executing command: ls -lF /var/lib/boinc/slots/11
[2026-01-09 11:36:23] 2026-01-09 10:35:33,164 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 11:36:23] 2026-01-09 10:35:33,164 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 11:36:23] 2026-01-09 10:35:33,164 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 11:36:23] 2026-01-09 10:35:33,164 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 11:36:23] 2026-01-09 10:35:33,164 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 11:36:23] 2026-01-09 10:35:33,164 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 11:36:23] 2026-01-09 10:35:33,165 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 11:36:23] 2026-01-09 10:35:33,165 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 11:36:23] 2026-01-09 10:35:33,165 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 11:36:23] 2026-01-09 10:35:33,165 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 11:36:23] 2026-01-09 10:35:33,165 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 11:36:23] 2026-01-09 10:35:33,165 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 11:36:23] 2026-01-09 10:35:33,165 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 11:36:23] 2026-01-09 10:35:33,165 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 11:36:23] 2026-01-09 10:35:33,165 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 11:36:23] 2026-01-09 10:35:33,166 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 11:36:23] 2026-01-09 10:35:33,166 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 11:36:23] 2026-01-09 10:35:33,166 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 11:36:23] 2026-01-09 10:35:33,166 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 11:36:23] 2026-01-09 10:35:33,166 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 11:36:23] 2026-01-09 10:35:33,166 | INFO     | job 6963162113 has completed (purged errors)
[2026-01-09 11:36:23] 2026-01-09 10:35:33,166 | INFO     | overall cleanup function is called
[2026-01-09 11:36:23] 2026-01-09 10:35:34,174 | INFO     | --- collectZombieJob: --- 10, [31183]
[2026-01-09 11:36:23] 2026-01-09 10:35:34,175 | INFO     | zombie collector waiting for pid 31183
[2026-01-09 11:36:23] 2026-01-09 10:35:34,175 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 11:36:23] 2026-01-09 10:35:34,175 | INFO     | collected zombie processes
[2026-01-09 11:36:23] 2026-01-09 10:35:34,175 | INFO     | will attempt to kill all subprocesses of pid=31183
[2026-01-09 11:36:23] 2026-01-09 10:35:34,237 | INFO     | process IDs to be killed: [31183] (in reverse order)
[2026-01-09 11:36:23] 2026-01-09 10:35:34,285 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 11:36:23] 2026-01-09 10:35:34,286 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 11:36:23] 2026-01-09 10:35:34,288 | INFO     | did not find any defunct processes belonging to 31183
[2026-01-09 11:36:23] 2026-01-09 10:35:34,289 | INFO     | did not find any defunct processes belonging to 31183
[2026-01-09 11:36:23] 2026-01-09 10:35:34,290 | INFO     | ready for new job
[2026-01-09 11:36:23] 2026-01-09 10:35:34,290 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 11:36:23] 2026-01-09 10:35:34,291 | INFO     | ***************************************
[2026-01-09 11:36:23] 2026-01-09 10:35:34,292 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 11:36:23] 2026-01-09 10:35:34,292 | INFO     | ***************************************
[2026-01-09 11:36:23] 2026-01-09 10:35:34,292 | INFO     | 
[2026-01-09 11:36:23] 2026-01-09 10:35:34,292 | INFO     | pilot is running in a VM
[2026-01-09 11:36:23] 2026-01-09 10:35:34,293 | INFO     | architecture information:
[2026-01-09 11:36:23] 2026-01-09 10:35:34,293 | INFO     | executing command: cat /etc/os-release
[2026-01-09 11:36:23] 2026-01-09 10:35:34,312 | INFO     | cat /etc/os-release:
[2026-01-09 11:36:23] NAME="CentOS Linux"
[2026-01-09 11:36:23] VERSION="7 (Core)"
[2026-01-09 11:36:23] ID="centos"
[2026-01-09 11:36:23] ID_LIKE="rhel fedora"
[2026-01-09 11:36:23] VERSION_ID="7"
[2026-01-09 11:36:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 11:36:23] ANSI_COLOR="0;31"
[2026-01-09 11:36:23] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 11:36:23] HOME_URL="https://www.centos.org/"
[2026-01-09 11:36:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 11:36:23] 
[2026-01-09 11:36:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 11:36:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 11:36:23] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 11:36:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 11:36:23] 
[2026-01-09 11:36:23] 2026-01-09 10:35:34,312 | INFO     | ***************************************
[2026-01-09 11:36:23] 2026-01-09 10:35:34,815 | INFO     | executing command: df -mP /var/lib/boinc/slots/11
[2026-01-09 11:36:23] 2026-01-09 10:35:34,835 | INFO     | sufficient remaining disk space (498117640192 B)
[2026-01-09 11:36:23] 2026-01-09 10:35:34,835 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 11:36:23] 2026-01-09 10:35:34,835 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 11:36:23] 2026-01-09 10:35:34,835 | INFO     | update_server=False
[2026-01-09 11:36:23] 2026-01-09 10:35:34,836 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 11:36:23] 2026-01-09 10:35:34,836 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 11:36:23] 2026-01-09 10:35:34,836 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 11:36:23] 2026-01-09 10:35:34,837 | INFO     | aborting loop
[2026-01-09 11:36:23] 2026-01-09 10:35:34,858 | INFO     | all job control threads have been joined
[2026-01-09 11:36:23] 2026-01-09 10:35:35,287 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 11:36:23] 2026-01-09 10:35:35,574 | INFO     | all payload control threads have been joined
[2026-01-09 11:36:23] 2026-01-09 10:35:35,765 | INFO     | all data control threads have been joined
[2026-01-09 11:36:23] 2026-01-09 10:35:35,841 | INFO     | [job] retrieve thread has finished
[2026-01-09 11:36:23] 2026-01-09 10:35:35,842 | INFO     | [job] queue monitor thread has finished
[2026-01-09 11:36:23] 2026-01-09 10:35:35,843 | INFO     | [job] job monitor thread has finished
[2026-01-09 11:36:23] 2026-01-09 10:35:35,863 | INFO     | [job] control thread has finished
[2026-01-09 11:36:23] 2026-01-09 10:35:35,910 | INFO     | [payload] failed_post thread has finished
[2026-01-09 11:36:23] 2026-01-09 10:35:36,007 | INFO     | [payload] validate_post thread has finished
[2026-01-09 11:36:23] 2026-01-09 10:35:36,580 | INFO     | [payload] control thread has finished
[2026-01-09 11:36:23] 2026-01-09 10:35:36,639 | INFO     | [job] validate thread has finished
[2026-01-09 11:36:23] 2026-01-09 10:35:36,716 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 11:36:23] 2026-01-09 10:35:36,771 | INFO     | [data] control thread has finished
[2026-01-09 11:36:23] 2026-01-09 10:35:36,772 | INFO     | [data] copytool_in thread has finished
[2026-01-09 11:36:23] 2026-01-09 10:35:36,905 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 11:36:23] 2026-01-09 10:35:37,181 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 11:36:23] 2026-01-09 10:35:37,292 | INFO     | [data] copytool_out thread has finished
[2026-01-09 11:36:23] 2026-01-09 10:35:37,299 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 11:36:23] 2026-01-09 10:35:37,897 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 11:36:23] 2026-01-09 10:35:41,904 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 11:36:23] 2026-01-09 10:36:04,888 | INFO     | PID=24691 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-09 11:36:23] 2026-01-09 10:36:04,889 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 11:36:23] 2026-01-09 10:36:04,889 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 11:36:23] 2026-01-09 10:36:04,889 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 11:36:23] 2026-01-09 10:36:16,191 | INFO     | [monitor] cgroup control has ended
[2026-01-09 11:36:23] 2026-01-09 10:36:17,649 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139679428470592)>', '<ExcThread(monitor, started 139678778914560)>']
[2026-01-09 11:36:23] 2026-01-09 10:36:17,947 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 11:36:23] 2026-01-09 10:36:17,947 | INFO     | [monitor] control thread has ended
[2026-01-09 11:36:23] 2026-01-09 10:36:22,673 | INFO     | all workflow threads have been joined
[2026-01-09 11:36:23] 2026-01-09 10:36:22,673 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 11:36:23] 2026-01-09 10:36:22,674 | INFO     | traces error code: 0
[2026-01-09 11:36:23] 2026-01-09 10:36:22,674 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 11:36:23] 2026-01-09 10:36:22,811 [wrapper] ==== pilot stdout END ====
[2026-01-09 11:36:23] 2026-01-09 10:36:22,816 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 11:36:23] 2026-01-09 10:36:22,820 [wrapper] pilotpid: 24691
[2026-01-09 11:36:23] 2026-01-09 10:36:22,823 [wrapper] Pilot exit status: 0
[2026-01-09 11:36:23] 2026-01-09 10:36:22,839 [wrapper] pandaids: 6963162113
[2026-01-09 11:36:23] 2026-01-09 10:36:22,877 [wrapper] cleanup supervisor_pilot 17685 24692
[2026-01-09 11:36:23] 2026-01-09 10:36:22,888 [wrapper] Test setup, not cleaning
[2026-01-09 11:36:23] 2026-01-09 10:36:22,892 [wrapper] apfmon messages muted
[2026-01-09 11:36:23] 2026-01-09 10:36:22,895 [wrapper] ==== wrapper stdout END ====
[2026-01-09 11:36:23] 2026-01-09 10:36:22,899 [wrapper] ==== wrapper stderr END ====
[2026-01-09 11:36:23]  *** Error codes and diagnostics ***
[2026-01-09 11:36:23]     "exeErrorCode": 0,
[2026-01-09 11:36:23]     "exeErrorDiag": "",
[2026-01-09 11:36:23]     "pilotErrorCode": 0,
[2026-01-09 11:36:23]     "pilotErrorDiag": "",
[2026-01-09 11:36:23]  *** Listing of results directory ***
[2026-01-09 11:36:23] total 442376
[2026-01-09 11:36:23] -rw-r--r--. 1 boinc boinc    579449 Jan  8 22:44 pilot3.tar.gz
[2026-01-09 11:36:23] -rwx------. 1 boinc boinc     36322 Jan  8 22:46 runpilot2-wrapper.sh
[2026-01-09 11:36:23] -rw-r--r--. 1 boinc boinc      5112 Jan  8 22:47 queuedata.json
[2026-01-09 11:36:23] -rw-r--r--. 1 boinc boinc       100 Jan  9 08:49 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 11:36:23] -rwxr-xr-x. 1 boinc boinc      7986 Jan  9 08:49 run_atlas
[2026-01-09 11:36:23] -rw-r--r--. 1 boinc boinc       105 Jan  9 08:49 job.xml
[2026-01-09 11:36:23] -rw-r--r--. 1 boinc boinc      6390 Jan  9 08:49 init_data.xml
[2026-01-09 11:36:23] -rw-r--r--. 2 boinc boinc 224920926 Jan  9 08:49 EVNT.47898824._001238.pool.root.1
[2026-01-09 11:36:23] -rw-r--r--. 2 boinc boinc     15847 Jan  9 08:49 start_atlas.sh
[2026-01-09 11:36:23] drwxrwx--x. 2 boinc boinc        68 Jan  9 08:49 shared
[2026-01-09 11:36:23] -rw-r--r--. 2 boinc boinc    592399 Jan  9 08:49 input.tar.gz
[2026-01-09 11:36:23] -rw-r--r--. 1 boinc boinc         0 Jan  9 08:49 boinc_lockfile
[2026-01-09 11:36:23] -rw-r--r--. 1 boinc boinc      2519 Jan  9 08:49 pandaJob.out
[2026-01-09 11:36:23] -rw-------. 1 boinc boinc    989771 Jan  9 08:49 agis_schedconf.cvmfs.json
[2026-01-09 11:36:23] -rw-------. 1 boinc boinc   1516240 Jan  9 08:49 agis_ddmendpoints.agis.ALL.json
[2026-01-09 11:36:23] drwx------. 5 boinc boinc      4096 Jan  9 08:50 pilot3
[2026-01-09 11:36:23] -rw-------. 1 boinc boinc 220701566 Jan  9 11:34 HITS.47898826._033740.pool.root.1
[2026-01-09 11:36:23] -rw-r--r--. 1 boinc boinc       529 Jan  9 11:35 boinc_task_state.xml
[2026-01-09 11:36:23] -rw-------. 1 boinc boinc      1010 Jan  9 11:35 memory_monitor_summary.json
[2026-01-09 11:36:23] -rw-------. 1 boinc boinc    399740 Jan  9 11:35 log.47898826._033740.job.log.tgz.1
[2026-01-09 11:36:23] -rw-------. 1 boinc boinc      7764 Jan  9 11:35 heartbeat.json
[2026-01-09 11:36:23] -rw-------. 1 boinc boinc        95 Jan  9 11:36 pilot_heartbeat.json
[2026-01-09 11:36:23] -rw-r--r--. 1 boinc boinc      8192 Jan  9 11:36 boinc_mmap_file
[2026-01-09 11:36:23] -rw-r--r--. 1 boinc boinc        28 Jan  9 11:36 wrapper_checkpoint.txt
[2026-01-09 11:36:23] -rw-------. 1 boinc boinc      4810 Jan  9 11:36 pilotlog.txt
[2026-01-09 11:36:23] -rw-------. 1 boinc boinc   1337192 Jan  9 11:36 log.47898826._033740.job.log.1
[2026-01-09 11:36:23] -rw-------. 1 boinc boinc       357 Jan  9 11:36 output.list
[2026-01-09 11:36:23] -rw-r--r--. 1 boinc boinc       620 Jan  9 11:36 runtime_log
[2026-01-09 11:36:23] -rw-------. 1 boinc boinc   1751040 Jan  9 11:36 result.tar.gz
[2026-01-09 11:36:23] -rw-------. 1 boinc boinc       653 Jan  9 11:36 zVGODmS1Cy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmJXlKDmSTa0Vn.diag
[2026-01-09 11:36:23] -rw-r--r--. 1 boinc boinc      8832 Jan  9 11:36 runtime_log.err
[2026-01-09 11:36:23] -rw-r--r--. 1 boinc boinc     20737 Jan  9 11:36 stderr.txt
[2026-01-09 11:36:23] HITS file was successfully produced:
[2026-01-09 11:36:23] -rw-------. 1 boinc boinc 220701566 Jan  9 11:34 shared/HITS.pool.root.1
[2026-01-09 11:36:23]  *** Contents of shared directory: ***
[2026-01-09 11:36:23] total 437492
[2026-01-09 11:36:23] -rw-r--r--. 2 boinc boinc 224920926 Jan  9 08:49 ATLAS.root_0
[2026-01-09 11:36:23] -rw-r--r--. 2 boinc boinc     15847 Jan  9 08:49 start_atlas.sh
[2026-01-09 11:36:23] -rw-r--r--. 2 boinc boinc    592399 Jan  9 08:49 input.tar.gz
[2026-01-09 11:36:23] -rw-------. 1 boinc boinc 220701566 Jan  9 11:34 HITS.pool.root.1
[2026-01-09 11:36:23] -rw-------. 1 boinc boinc   1751040 Jan  9 11:36 result.tar.gz
11:36:24 (20952): run_atlas exited; CPU time 75662.892519
11:36:24 (20952): called boinc_finish(0)

</stderr_txt>
]]>

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