Stderr output

<core_client_version>7.16.6</core_client_version>
<![CDATA[
<stderr_txt>
20:53:55 (2894683): wrapper (7.7.26015): starting
20:53:55 (2894683): wrapper: running run_atlas (--nthreads 12)
[2026-01-09 20:53:55] Arguments: --nthreads 12
[2026-01-09 20:53:55] Threads: 12
[2026-01-09 20:53:55] Checking for CVMFS
[2026-01-09 20:53:55] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 20:53:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 20:53:55] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 20:53:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 20:53:56] 2.12.7.0 2330541 2577 64616 154955 0 57 3105367 4096001 0 130560 0 1530863 99.946 100493 43 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2026-01-09 20:53:56] CVMFS is ok
[2026-01-09 20:53:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 20:53:56] Checking for apptainer binary...
[2026-01-09 20:53:56] apptainer is not installed, using version from CVMFS
[2026-01-09 20:53:56] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 20:53:56] lithium
[2026-01-09 20:53:56] apptainer works
[2026-01-09 20:53:56] Set ATHENA_PROC_NUMBER=12
[2026-01-09 20:53:56] Set ATHENA_CORE_NUMBER=12
[2026-01-09 20:53:56] Starting ATLAS job with PandaID=6963148929
[2026-01-09 20:53:56] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 23:13:29]  *** The last 200 lines of the pilot log: ***
[2026-01-09 23:13:29] 2026-01-09 22:12:27,541 | INFO     | time since job start (8300s) is within the limit (349056.0s)
[2026-01-09 23:13:29] 2026-01-09 22:12:28,546 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-09 23:13:29] 2026-01-09 22:12:28,548 | INFO     | found 8 cores (4 cores per socket, 2 sockets) HT, CPU MHz: 2439.288375
[2026-01-09 23:13:29] 2026-01-09 22:12:28,550 | INFO     | using path: /var/lib/boinc-client/slots/0/PanDA_Pilot-6963148929/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 23:13:29] 2026-01-09 22:12:28,551 | INFO     | extracted standard info from prmon json
[2026-01-09 23:13:29] 2026-01-09 22:12:28,551 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 23:13:29] 2026-01-09 22:12:28,551 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 23:13:29] 2026-01-09 22:12:28,552 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 23:13:29] 2026-01-09 22:12:28,552 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 23:13:29] 2026-01-09 22:12:28,554 | INFO     | fitting pss+swap vs Time
[2026-01-09 23:13:29] 2026-01-09 22:12:28,555 | INFO     | sum of square deviations: 762879420.0
[2026-01-09 23:13:29] 2026-01-09 22:12:28,555 | INFO     | sum of deviations: -5549443036.000002
[2026-01-09 23:13:29] 2026-01-09 22:12:28,555 | INFO     | mean x: 1767992556.0
[2026-01-09 23:13:29] 2026-01-09 22:12:28,555 | INFO     | mean y: 2700644.407407407
[2026-01-09 23:13:29] 2026-01-09 22:12:28,556 | INFO     | intersect: 12863676731.026762
[2026-01-09 23:13:29] 2026-01-09 22:12:28,556 | INFO     | chi2: 2.315008387075069
[2026-01-09 23:13:29] 2026-01-09 22:12:28,556 | INFO     | sum of square deviations: 681212772.5
[2026-01-09 23:13:29] 2026-01-09 22:12:28,557 | INFO     | sum of deviations: 4499237938.999995
[2026-01-09 23:13:29] 2026-01-09 22:12:28,557 | INFO     | mean x: 1767992403.5
[2026-01-09 23:13:29] 2026-01-09 22:12:28,557 | INFO     | mean y: 2718849.3846153845
[2026-01-09 23:13:29] 2026-01-09 22:12:28,557 | INFO     | intersect: -11674423475.02914
[2026-01-09 23:13:29] 2026-01-09 22:12:28,557 | INFO     | chi2: 1.4961637277363338
[2026-01-09 23:13:29] 2026-01-09 22:12:28,557 | INFO     | current chi2=1.4961637277363338 (change=35.37113143565395 %)
[2026-01-09 23:13:29] 2026-01-09 22:12:28,558 | INFO     | sum of square deviations: 605592750.0
[2026-01-09 23:13:29] 2026-01-09 22:12:28,558 | INFO     | sum of deviations: 4384081590.000003
[2026-01-09 23:13:29] 2026-01-09 22:12:28,558 | INFO     | mean x: 1767992251.0
[2026-01-09 23:13:29] 2026-01-09 22:12:28,558 | INFO     | mean y: 2718617.224
[2026-01-09 23:13:29] 2026-01-09 22:12:28,559 | INFO     | intersect: -12796348542.796926
[2026-01-09 23:13:29] 2026-01-09 22:12:28,559 | INFO     | chi2: 1.4975261964470985
[2026-01-09 23:13:29] 2026-01-09 22:12:28,559 | INFO     | current chi2=1.4975261964470985 (change=-0.09106414528750265 %)
[2026-01-09 23:13:29] 2026-01-09 22:12:28,559 | INFO     | right removable region: 124
[2026-01-09 23:13:29] 2026-01-09 22:12:28,560 | INFO     | sum of square deviations: 681212772.5
[2026-01-09 23:13:29] 2026-01-09 22:12:28,560 | INFO     | sum of deviations: -24701177069.000004
[2026-01-09 23:13:29] 2026-01-09 22:12:28,560 | INFO     | mean x: 1767992708.5
[2026-01-09 23:13:29] 2026-01-09 22:12:28,560 | INFO     | mean y: 2735726.123076923
[2026-01-09 23:13:29] 2026-01-09 22:12:28,561 | INFO     | intersect: 64111194510.72317
[2026-01-09 23:13:29] 2026-01-09 22:12:28,561 | INFO     | chi2: 1.0302675623193147
[2026-01-09 23:13:29] 2026-01-09 22:12:28,561 | INFO     | current chi2=1.0302675623193147 (change=55.496162861810575 %)
[2026-01-09 23:13:29] 2026-01-09 22:12:28,561 | INFO     | sum of square deviations: 605592750.0
[2026-01-09 23:13:29] 2026-01-09 22:12:28,562 | INFO     | sum of deviations: -22336955783.0
[2026-01-09 23:13:29] 2026-01-09 22:12:28,562 | INFO     | mean x: 1767992861.0
[2026-01-09 23:13:29] 2026-01-09 22:12:28,562 | INFO     | mean y: 2730785.216
[2026-01-09 23:13:29] 2026-01-09 22:12:28,563 | INFO     | intersect: 65214175870.74034
[2026-01-09 23:13:29] 2026-01-09 22:12:28,563 | INFO     | chi2: 1.0010744048206146
[2026-01-09 23:13:29] 2026-01-09 22:12:28,563 | INFO     | current chi2=1.0010744048206146 (change=2.833551066383294 %)
[2026-01-09 23:13:29] 2026-01-09 22:12:28,563 | INFO     | left removable region: 20
[2026-01-09 23:13:29] 2026-01-09 22:12:28,563 | INFO     | sum of square deviations: 348769330.0
[2026-01-09 23:13:29] 2026-01-09 22:12:28,564 | INFO     | sum of deviations: -55355975.00000018
[2026-01-09 23:13:29] 2026-01-09 22:12:28,564 | INFO     | mean x: 1767992830.5
[2026-01-09 23:13:29] 2026-01-09 22:12:28,564 | INFO     | mean y: 2720541.230769231
[2026-01-09 23:13:29] 2026-01-09 22:12:28,564 | INFO     | intersect: 283332850.01760423
[2026-01-09 23:13:29] 2026-01-09 22:12:28,565 | INFO     | chi2: 0.023010059171385606
[2026-01-09 23:13:29] 2026-01-09 22:12:28,565 | INFO     | current memory leak: -0.16 B/s (using 104 data points, chi2=0.02)
[2026-01-09 23:13:29] 2026-01-09 22:12:28,565 | INFO     | could have reported an average CPU frequency of 2684 MHz (8 samples)
[2026-01-09 23:13:29] 2026-01-09 22:12:28,565 | INFO     | ..............................
[2026-01-09 23:13:29] 2026-01-09 22:12:28,566 | INFO     | . Timing measurements:
[2026-01-09 23:13:29] 2026-01-09 22:12:28,566 | INFO     | . get job = 0 s
[2026-01-09 23:13:29] 2026-01-09 22:12:28,566 | INFO     | . initial setup = 1 s
[2026-01-09 23:13:29] 2026-01-09 22:12:28,566 | INFO     | . payload setup = 4 s
[2026-01-09 23:13:29] 2026-01-09 22:12:28,566 | INFO     | . stage-in = 0 s
[2026-01-09 23:13:29] 2026-01-09 22:12:28,566 | INFO     | . payload execution = 8199 s
[2026-01-09 23:13:29] 2026-01-09 22:12:28,567 | INFO     | . stage-out = 0 s
[2026-01-09 23:13:29] 2026-01-09 22:12:28,567 | INFO     | . log creation = 0 s
[2026-01-09 23:13:29] 2026-01-09 22:12:28,567 | INFO     | ..............................
[2026-01-09 23:13:29] 2026-01-09 22:12:28,681 | INFO     | 
[2026-01-09 23:13:29] 2026-01-09 22:12:28,681 | INFO     | job summary report
[2026-01-09 23:13:29] 2026-01-09 22:12:28,681 | INFO     | --------------------------------------------------
[2026-01-09 23:13:29] 2026-01-09 22:12:28,681 | INFO     | PanDA job id: 6963148929
[2026-01-09 23:13:29] 2026-01-09 22:12:28,682 | INFO     | task id: 47898826
[2026-01-09 23:13:29] 2026-01-09 22:12:28,682 | INFO     | errors: (none)
[2026-01-09 23:13:29] 2026-01-09 22:12:28,682 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 23:13:29] 2026-01-09 22:12:28,682 | INFO     | pilot state: finished 
[2026-01-09 23:13:29] 2026-01-09 22:12:28,682 | INFO     | transexitcode: 0
[2026-01-09 23:13:29] 2026-01-09 22:12:28,682 | INFO     | exeerrorcode: 0
[2026-01-09 23:13:29] 2026-01-09 22:12:28,683 | INFO     | exeerrordiag: 
[2026-01-09 23:13:29] 2026-01-09 22:12:28,683 | INFO     | exitcode: 0
[2026-01-09 23:13:29] 2026-01-09 22:12:28,683 | INFO     | exitmsg: OK
[2026-01-09 23:13:29] 2026-01-09 22:12:28,683 | INFO     | cpuconsumptiontime: 90909 s
[2026-01-09 23:13:29] 2026-01-09 22:12:28,683 | INFO     | nevents: 400
[2026-01-09 23:13:29] 2026-01-09 22:12:28,683 | INFO     | neventsw: 0
[2026-01-09 23:13:29] 2026-01-09 22:12:28,684 | INFO     | pid: 2905109
[2026-01-09 23:13:29] 2026-01-09 22:12:28,684 | INFO     | pgrp: 2905109
[2026-01-09 23:13:29] 2026-01-09 22:12:28,684 | INFO     | corecount: 12
[2026-01-09 23:13:29] 2026-01-09 22:12:28,684 | INFO     | event service: False
[2026-01-09 23:13:29] 2026-01-09 22:12:28,684 | INFO     | sizes: {0: 2283863, 1: 2284005, 3: 2284267, 11: 2284295, 8207: 2312194, 8208: 2321206, 8210: 2321390, 8287: 2321584}
[2026-01-09 23:13:29] 2026-01-09 22:12:28,684 | INFO     | --------------------------------------------------
[2026-01-09 23:13:29] 2026-01-09 22:12:28,685 | INFO     | 
[2026-01-09 23:13:29] 2026-01-09 22:12:28,685 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/0
[2026-01-09 23:13:29] 2026-01-09 22:12:28,701 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 23:13:29] 2026-01-09 22:12:28,701 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 23:13:29] 2026-01-09 22:12:28,702 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 23:13:29] 2026-01-09 22:12:28,702 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 23:13:29] 2026-01-09 22:12:28,702 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 23:13:29] 2026-01-09 22:12:28,702 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 23:13:29] 2026-01-09 22:12:28,702 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 23:13:29] 2026-01-09 22:12:28,702 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 23:13:29] 2026-01-09 22:12:28,702 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 23:13:29] 2026-01-09 22:12:28,703 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 23:13:29] 2026-01-09 22:12:28,703 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 23:13:29] 2026-01-09 22:12:28,703 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 23:13:29] 2026-01-09 22:12:28,703 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 23:13:29] 2026-01-09 22:12:28,703 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 23:13:29] 2026-01-09 22:12:28,703 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 23:13:29] 2026-01-09 22:12:28,704 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 23:13:29] 2026-01-09 22:12:28,704 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 23:13:29] 2026-01-09 22:12:28,704 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 23:13:29] 2026-01-09 22:12:28,704 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 23:13:29] 2026-01-09 22:12:28,704 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 23:13:29] 2026-01-09 22:12:28,705 | INFO     | job 6963148929 has completed (purged errors)
[2026-01-09 23:13:29] 2026-01-09 22:12:28,705 | INFO     | overall cleanup function is called
[2026-01-09 23:13:29] 2026-01-09 22:12:28,748 | INFO     | PID=2898520 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 23:13:29] 2026-01-09 22:12:29,713 | INFO     | --- collectZombieJob: --- 10, [2905109]
[2026-01-09 23:13:29] 2026-01-09 22:12:29,713 | INFO     | zombie collector waiting for pid 2905109
[2026-01-09 23:13:29] 2026-01-09 22:12:29,713 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 23:13:29] 2026-01-09 22:12:29,713 | INFO     | collected zombie processes
[2026-01-09 23:13:29] 2026-01-09 22:12:29,713 | INFO     | will attempt to kill all subprocesses of pid=2905109
[2026-01-09 23:13:29] 2026-01-09 22:12:29,789 | INFO     | process IDs to be killed: [2905109] (in reverse order)
[2026-01-09 23:13:29] 2026-01-09 22:12:29,829 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 23:13:29] 2026-01-09 22:12:29,830 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 23:13:29] 2026-01-09 22:12:29,832 | INFO     | did not find any defunct processes belonging to 2905109
[2026-01-09 23:13:29] 2026-01-09 22:12:29,834 | INFO     | did not find any defunct processes belonging to 2905109
[2026-01-09 23:13:29] 2026-01-09 22:12:29,835 | INFO     | ready for new job
[2026-01-09 23:13:29] 2026-01-09 22:12:29,835 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 23:13:29] 2026-01-09 22:12:29,836 | INFO     | ***************************************
[2026-01-09 23:13:29] 2026-01-09 22:12:29,836 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 23:13:29] 2026-01-09 22:12:29,836 | INFO     | ***************************************
[2026-01-09 23:13:29] 2026-01-09 22:12:29,836 | INFO     | 
[2026-01-09 23:13:29] 2026-01-09 22:12:29,858 | INFO     | architecture information:
[2026-01-09 23:13:29] 2026-01-09 22:12:29,858 | INFO     | executing command: cat /etc/os-release
[2026-01-09 23:13:29] 2026-01-09 22:12:29,868 | INFO     | cat /etc/os-release:
[2026-01-09 23:13:29] NAME="CentOS Linux"
[2026-01-09 23:13:29] VERSION="7 (Core)"
[2026-01-09 23:13:29] ID="centos"
[2026-01-09 23:13:29] ID_LIKE="rhel fedora"
[2026-01-09 23:13:29] VERSION_ID="7"
[2026-01-09 23:13:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 23:13:29] ANSI_COLOR="0;31"
[2026-01-09 23:13:29] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 23:13:29] HOME_URL="https://www.centos.org/"
[2026-01-09 23:13:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 23:13:29] 
[2026-01-09 23:13:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 23:13:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 23:13:29] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 23:13:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 23:13:29] 
[2026-01-09 23:13:29] 2026-01-09 22:12:29,868 | INFO     | ***************************************
[2026-01-09 23:13:29] 2026-01-09 22:12:30,371 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/0
[2026-01-09 23:13:29] 2026-01-09 22:12:30,384 | INFO     | sufficient remaining disk space (34930163712 B)
[2026-01-09 23:13:29] 2026-01-09 22:12:30,384 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 23:13:29] 2026-01-09 22:12:30,384 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 23:13:29] 2026-01-09 22:12:30,384 | INFO     | update_server=False
[2026-01-09 23:13:29] 2026-01-09 22:12:30,384 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 23:13:29] 2026-01-09 22:12:30,385 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 23:13:29] 2026-01-09 22:12:30,385 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 23:13:29] 2026-01-09 22:12:30,385 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 23:13:29] 2026-01-09 22:12:30,385 | INFO     | aborting loop
[2026-01-09 23:13:29] 2026-01-09 22:12:30,852 | INFO     | all job control threads have been joined
[2026-01-09 23:13:29] 2026-01-09 22:12:31,046 | INFO     | all data control threads have been joined
[2026-01-09 23:13:29] 2026-01-09 22:12:31,062 | INFO     | all payload control threads have been joined
[2026-01-09 23:13:29] 2026-01-09 22:12:31,389 | INFO     | [job] queue monitor thread has finished
[2026-01-09 23:13:29] 2026-01-09 22:12:31,389 | INFO     | [job] job monitor thread has finished
[2026-01-09 23:13:29] 2026-01-09 22:12:31,390 | INFO     | [job] retrieve thread has finished
[2026-01-09 23:13:29] 2026-01-09 22:12:31,518 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 23:13:29] 2026-01-09 22:12:31,617 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 23:13:29] 2026-01-09 22:12:31,857 | INFO     | [job] control thread has finished
[2026-01-09 23:13:29] 2026-01-09 22:12:31,857 | INFO     | [payload] validate_post thread has finished
[2026-01-09 23:13:29] 2026-01-09 22:12:32,052 | INFO     | [data] control thread has finished
[2026-01-09 23:13:29] 2026-01-09 22:12:32,067 | INFO     | [payload] control thread has finished
[2026-01-09 23:13:29] 2026-01-09 22:12:32,391 | INFO     | [data] copytool_out thread has finished
[2026-01-09 23:13:29] 2026-01-09 22:12:32,453 | INFO     | [payload] failed_post thread has finished
[2026-01-09 23:13:29] 2026-01-09 22:12:32,488 | INFO     | [data] copytool_in thread has finished
[2026-01-09 23:13:29] 2026-01-09 22:12:32,656 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 23:13:29] 2026-01-09 22:12:32,837 | INFO     | [job] validate thread has finished
[2026-01-09 23:13:29] 2026-01-09 22:12:33,852 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 23:13:29] 2026-01-09 22:12:37,858 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 23:13:29] 2026-01-09 22:12:41,160 | INFO     | job.realtimelogging is not enabled
[2026-01-09 23:13:29] 2026-01-09 22:12:42,165 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 23:13:29] 2026-01-09 22:13:00,936 | INFO     | PID=2898520 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 23:13:29] 2026-01-09 22:13:00,936 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 23:13:29] 2026-01-09 22:13:00,937 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 23:13:29] 2026-01-09 22:13:00,937 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 23:13:29] 2026-01-09 22:13:20,615 | INFO     | [monitor] cgroup control has ended
[2026-01-09 23:13:29] 2026-01-09 22:13:22,309 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140065682495296)>', '<ExcThread(monitor, started 140065099466496)>']
[2026-01-09 23:13:29] 2026-01-09 22:13:23,027 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 23:13:29] 2026-01-09 22:13:23,027 | INFO     | [monitor] control thread has ended
[2026-01-09 23:13:29] 2026-01-09 22:13:27,333 | INFO     | all workflow threads have been joined
[2026-01-09 23:13:29] 2026-01-09 22:13:27,333 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 23:13:29] 2026-01-09 22:13:27,333 | INFO     | traces error code: 0
[2026-01-09 23:13:29] 2026-01-09 22:13:27,334 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 23:13:29] 2026-01-09 22:13:29,524 [wrapper] ==== pilot stdout END ====
[2026-01-09 23:13:29] 2026-01-09 22:13:29,527 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 23:13:29] 2026-01-09 22:13:29,530 [wrapper] pilotpid: 2898520
[2026-01-09 23:13:29] 2026-01-09 22:13:29,532 [wrapper] Pilot exit status: 0
[2026-01-09 23:13:29] 2026-01-09 22:13:29,541 [wrapper] pandaids: 6963148929
[2026-01-09 23:13:29] 2026-01-09 22:13:29,579 [wrapper] cleanup supervisor_pilot 2921957 2898521
[2026-01-09 23:13:29] 2026-01-09 22:13:29,581 [wrapper] Test setup, not cleaning
[2026-01-09 23:13:29] 2026-01-09 22:13:29,584 [wrapper] apfmon messages muted
[2026-01-09 23:13:29] 2026-01-09 22:13:29,586 [wrapper] ==== wrapper stdout END ====
[2026-01-09 23:13:29] 2026-01-09 22:13:29,588 [wrapper] ==== wrapper stderr END ====
[2026-01-09 23:13:29]  *** Error codes and diagnostics ***
[2026-01-09 23:13:29]     "exeErrorCode": 0,
[2026-01-09 23:13:29]     "exeErrorDiag": "",
[2026-01-09 23:13:29]     "pilotErrorCode": 0,
[2026-01-09 23:13:29]     "pilotErrorDiag": "",
[2026-01-09 23:13:29]  *** Listing of results directory ***
[2026-01-09 23:13:29] total 438400
[2026-01-09 23:13:29] -rw-r--r-- 1 boinc boinc    579449 Jan  8 17:02 pilot3.tar.gz
[2026-01-09 23:13:29] -rwx------ 1 boinc boinc     36322 Jan  8 17:03 runpilot2-wrapper.sh
[2026-01-09 23:13:29] -rw-r--r-- 1 boinc boinc      5112 Jan  8 17:04 queuedata.json
[2026-01-09 23:13:29] -rw-r--r-- 1 boinc boinc       100 Jan  9 20:53 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 23:13:29] -rwxr-xr-x 1 boinc boinc      7986 Jan  9 20:53 run_atlas
[2026-01-09 23:13:29] -rw-r--r-- 1 boinc boinc       105 Jan  9 20:53 job.xml
[2026-01-09 23:13:29] -rw-r--r-- 2 boinc boinc     15847 Jan  9 20:53 start_atlas.sh
[2026-01-09 23:13:29] drwxrwx--x 2 boinc boinc      4096 Jan  9 20:53 shared
[2026-01-09 23:13:29] -rw-r--r-- 2 boinc boinc    592401 Jan  9 20:53 input.tar.gz
[2026-01-09 23:13:29] -rw-r--r-- 1 boinc boinc      6045 Jan  9 20:53 init_data.xml
[2026-01-09 23:13:29] -rw-r--r-- 2 boinc boinc 226573733 Jan  9 20:53 EVNT.47898824._001116.pool.root.1
[2026-01-09 23:13:29] -rw-r--r-- 1 boinc boinc         0 Jan  9 20:53 boinc_lockfile
[2026-01-09 23:13:29] -rw-r--r-- 1 boinc boinc      2519 Jan  9 20:53 pandaJob.out
[2026-01-09 23:13:29] -rw------- 1 boinc boinc    989364 Jan  9 20:54 agis_schedconf.cvmfs.json
[2026-01-09 23:13:29] -rw------- 1 boinc boinc   1516240 Jan  9 20:54 agis_ddmendpoints.agis.ALL.json
[2026-01-09 23:13:29] drwx------ 5 boinc boinc      4096 Jan  9 20:54 pilot3
[2026-01-09 23:13:29] -rw------- 1 boinc boinc 215238957 Jan  9 23:10 HITS.47898826._028277.pool.root.1
[2026-01-09 23:13:29] -rw-r--r-- 1 boinc boinc       529 Jan  9 23:10 boinc_task_state.xml
[2026-01-09 23:13:29] -rw------- 1 boinc boinc      1068 Jan  9 23:11 memory_monitor_summary.json
[2026-01-09 23:13:29] -rw------- 1 boinc boinc    431258 Jan  9 23:11 log.47898826._028277.job.log.tgz.1
[2026-01-09 23:13:29] -rw------- 1 boinc boinc        95 Jan  9 23:12 pilot_heartbeat.json
[2026-01-09 23:13:29] -rw------- 1 boinc boinc      7837 Jan  9 23:12 heartbeat.json
[2026-01-09 23:13:29] -rw-r--r-- 1 boinc boinc      8192 Jan  9 23:13 boinc_mmap_file
[2026-01-09 23:13:29] -rw-r--r-- 1 boinc boinc        27 Jan  9 23:13 wrapper_checkpoint.txt
[2026-01-09 23:13:29] -rw------- 1 boinc boinc      4827 Jan  9 23:13 pilotlog.txt
[2026-01-09 23:13:29] -rw------- 1 boinc boinc   1165073 Jan  9 23:13 log.47898826._028277.job.log.1
[2026-01-09 23:13:29] -rw------- 1 boinc boinc       357 Jan  9 23:13 output.list
[2026-01-09 23:13:29] -rw-r--r-- 1 boinc boinc       620 Jan  9 23:13 runtime_log
[2026-01-09 23:13:29] -rw------- 1 boinc boinc   1617920 Jan  9 23:13 result.tar.gz
[2026-01-09 23:13:29] -rw------- 1 boinc boinc       654 Jan  9 23:13 yCpMDmGf7x8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm8ukKDmvz6mzn.diag
[2026-01-09 23:13:29] -rw-r--r-- 1 boinc boinc      8888 Jan  9 23:13 runtime_log.err
[2026-01-09 23:13:29] -rw-r--r-- 1 boinc boinc     20905 Jan  9 23:13 stderr.txt
[2026-01-09 23:13:29] HITS file was successfully produced:
[2026-01-09 23:13:29] -rw------- 1 boinc boinc 215238957 Jan  9 23:10 shared/HITS.pool.root.1
[2026-01-09 23:13:29]  *** Contents of shared directory: ***
[2026-01-09 23:13:29] total 433644
[2026-01-09 23:13:29] -rw-r--r-- 2 boinc boinc     15847 Jan  9 20:53 start_atlas.sh
[2026-01-09 23:13:29] -rw-r--r-- 2 boinc boinc    592401 Jan  9 20:53 input.tar.gz
[2026-01-09 23:13:29] -rw-r--r-- 2 boinc boinc 226573733 Jan  9 20:53 ATLAS.root_0
[2026-01-09 23:13:29] -rw------- 1 boinc boinc 215238957 Jan  9 23:10 HITS.pool.root.1
[2026-01-09 23:13:29] -rw------- 1 boinc boinc   1617920 Jan  9 23:13 result.tar.gz
23:13:31 (2894683): run_atlas exited; CPU time 90507.465196
23:13:31 (2894683): called boinc_finish(0)

</stderr_txt>
]]>

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