Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:50:55 (870073): wrapper (7.7.26015): starting
19:50:55 (870073): wrapper: running run_atlas (--nthreads 12)
[2026-01-08 19:50:55] Arguments: --nthreads 12
[2026-01-08 19:50:55] Threads: 12
[2026-01-08 19:50:55] Checking for CVMFS
[2026-01-08 19:50:55] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 19:50:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 19:50:56] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 19:50:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 19:50:56] 2.11.5.0 2596872 56049 199904 154929 3 307 43780374 45568001 13303 130560 0 383458375 99.788 238315432 25690 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2026-01-08 19:50:56] CVMFS is ok
[2026-01-08 19:50:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-08 19:50:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-08 19:50:56] Further information can be found at the LHC@home message board.
[2026-01-08 19:50:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 19:50:56] Checking for apptainer binary...
[2026-01-08 19:50:56] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-08 19:50:56] Running /usr/bin/apptainer --version
[2026-01-08 19:50:56] apptainer version 1.4.1-1.el9
[2026-01-08 19:50:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 19:50:56] wns0088.triumf.lcg
[2026-01-08 19:50:56] apptainer works
[2026-01-08 19:50:56] Set ATHENA_PROC_NUMBER=12
[2026-01-08 19:50:56] Set ATHENA_CORE_NUMBER=12
[2026-01-08 19:50:56] Starting ATLAS job with PandaID=6963161582
[2026-01-08 19:50:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-08 19:54:26]  *** The last 200 lines of the pilot log: ***
[2026-01-08 19:54:26] 2026-01-09 03:53:53,068 | WARNING  | found no stored workdir sizes
[2026-01-08 19:54:26] 2026-01-09 03:53:53,068 | INFO     | will not add max space = 0 B to job metrics
[2026-01-08 19:54:26] 2026-01-09 03:53:53,069 | WARNING  | wrong length of table data, x=[1767930693.0], y=[1984.0] (must be same and length>=4)
[2026-01-08 19:54:26] 2026-01-09 03:53:53,069 | INFO     | could have reported an average CPU frequency of 2672 MHz (4 samples)
[2026-01-08 19:54:26] 2026-01-09 03:53:53,069 | INFO     | ..............................
[2026-01-08 19:54:26] 2026-01-09 03:53:53,069 | INFO     | . Timing measurements:
[2026-01-08 19:54:26] 2026-01-09 03:53:53,069 | INFO     | . get job = 0 s
[2026-01-08 19:54:26] 2026-01-09 03:53:53,069 | INFO     | . initial setup = 2 s
[2026-01-08 19:54:26] 2026-01-09 03:53:53,069 | INFO     | . payload setup = 5 s
[2026-01-08 19:54:26] 2026-01-09 03:53:53,069 | INFO     | . stage-in = 0 s
[2026-01-08 19:54:26] 2026-01-09 03:53:53,069 | INFO     | . payload execution = 18 s
[2026-01-08 19:54:26] 2026-01-09 03:53:53,069 | INFO     | . stage-out = 0 s
[2026-01-08 19:54:26] 2026-01-09 03:53:53,069 | INFO     | . log creation = 0 s
[2026-01-08 19:54:26] 2026-01-09 03:53:53,069 | INFO     | ..............................
[2026-01-08 19:54:26] 2026-01-09 03:53:53,069 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-08 19:54:26] 2026-01-09 03:53:53,070 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6963161582/pilotlog.txt
[2026-01-08 19:54:26] 2026-01-09 03:53:53,082 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-01-08 19:54:26] - Log from pilotlog.txt -
[2026-01-08 19:54:26] 2026-01-09 03:53:53,067 | INFO     | extracted standard memory fields from prmon json
[2026-01-08 19:54:26] 2026-01-09 03:53:53,067 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 19:54:26] 2026-01-09 03:53:53,068 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 19:54:26] 2026-01-09 03:53:53,068 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 19:54:26] 2026-01-09 03:53:53,068 | WARNING  | found no stored workdir sizes
[2026-01-08 19:54:26] 2026-01-09 03:53:53,068 | INFO     | will not add max space = 0 B to job metrics
[2026-01-08 19:54:26] 2026-01-09 03:53:53,069 | WARNING  | wrong length of table data, x=[1767930693.0], y=[1984.0] (must be same and length>=4)
[2026-01-08 19:54:26] 2026-01-09 03:53:53,069 | INFO     | could have reported an average CPU frequency of 2672 MHz (4 samples)
[2026-01-08 19:54:26] 2026-01-09 03:53:53,069 | INFO     | ..............................
[2026-01-08 19:54:26] 2026-01-09 03:53:53,069 | INFO     | . Timing measurements:
[2026-01-08 19:54:26] 2026-01-09 03:53:53,069 | INFO     | . get job = 0 s
[2026-01-08 19:54:26] 2026-01-09 03:53:53,069 | INFO     | . initial setup = 2 s
[2026-01-08 19:54:26] 2026-01-09 03:53:53,069 | INFO     | . payload setup = 5 s
[2026-01-08 19:54:26] 2026-01-09 03:53:53,069 | INFO     | . stage-in = 0 s
[2026-01-08 19:54:26] 2026-01-09 03:53:53,069 | INFO     | . payload execution = 18 s
[2026-01-08 19:54:26] 2026-01-09 03:53:53,069 | INFO     | . stage-out = 0 s
[2026-01-08 19:54:26] 2026-01-09 03:53:53,069 | INFO     | . log creation = 0 s
[2026-01-08 19:54:26] 2026-01-09 03:53:53,069 | INFO     | ..............................
[2026-01-08 19:54:26] 2026-01-09 03:53:53,069 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-08 19:54:26] 2026-01-09 03:53:53,070 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6963161582/pilotlog.txt
[2026-01-08 19:54:26] 2026-01-09 03:53:53,082 | WARNING  | 
[2026-01-08 19:54:26] [begin log extracts]
[2026-01-08 19:54:26] - Log from pilotlog.txt -
[2026-01-08 19:54:26] 2026-01-09 03:53:53,067 | INFO     | extracted standard memory fields from prmon json
[2026-01-08 19:54:26] 2026-01-09 03:53:53,067 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 19:54:26] 2026-01-09 03:53:53,068 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 19:54:26] 2026-01-09 03:53:53,068 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 19:54:26] 2026-01-09 03:53:53,068 | WARNING  | found no stored workdir sizes
[2026-01-08 19:54:26] 2026-01-09 03:53:53,068 | INFO     | will not add max space = 0 B to job metrics
[2026-01-08 19:54:26] 2026-01-09 03:53:53,069 | WARNING  | wrong length of table data, x=[1767930693.0], y=[1984.0] (must be same and length>=4)
[2026-01-08 19:54:26] 2026-01-09 03:53:53,069 | INFO     | could have reported an average CPU frequency of 2672 MHz (4 samples)
[2026-01-08 19:54:26] 2026-01-09 03:53:53,069 | INFO     | ..............................
[2026-01-08 19:54:26] 2026-01-09 03:53:53,069 | INFO     | . Timing measurements:
[2026-01-08 19:54:26] 2026-01-09 03:53:53,069 | INFO     | . get job = 0 s
[2026-01-08 19:54:26] 2026-01-09 03:53:53,069 | INFO     | . initial setup = 2 s
[2026-01-08 19:54:26] 2026-01-09 03:53:53,069 | INFO     | . payload setup = 5 s
[2026-01-08 19:54:26] 2026-01-09 03:53:53,069 | INFO     | . stage-in = 0 s
[2026-01-08 19:54:26] 2026-01-09 03:53:53,069 | INFO     | . payload execution = 18 s
[2026-01-08 19:54:26] 2026-01-09 03:53:53,069 | INFO     | . stage-out = 0 s
[2026-01-08 19:54:26] 2026-01-09 03:53:53,069 | INFO     | . log creation = 0 s
[2026-01-08 19:54:26] 2026-01-09 03:53:53,069 | INFO     | ..............................
[2026-01-08 19:54:26] 2026-01-09 03:53:53,069 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-08 19:54:26] 2026-01-09 03:53:53,070 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6963161582/pilotlog.txt
[2026-01-08 19:54:26] [end log extracts]
[2026-01-08 19:54:26] 2026-01-09 03:53:53,083 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2026-01-08 19:54:26] 2026-01-09 03:53:53,083 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-01-08 19:54:26] 2026-01-09 03:53:53,140 | INFO     | 
[2026-01-08 19:54:26] 2026-01-09 03:53:53,141 | INFO     | job summary report
[2026-01-08 19:54:26] 2026-01-09 03:53:53,141 | INFO     | --------------------------------------------------
[2026-01-08 19:54:26] 2026-01-09 03:53:53,141 | INFO     | PanDA job id: 6963161582
[2026-01-08 19:54:26] 2026-01-09 03:53:53,141 | INFO     | task id: 47898826
[2026-01-08 19:54:26] 2026-01-09 03:53:53,141 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-01-08 19:51:41,154 CRITICAL Transform executor raised TransformValidationExceptio
[2026-01-08 19:54:26] 2026-01-09 03:53:53,141 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-08 19:54:26] 2026-01-09 03:53:53,141 | INFO     | pilot state: failed 
[2026-01-08 19:54:26] 2026-01-09 03:53:53,141 | INFO     | transexitcode: 65
[2026-01-08 19:54:26] 2026-01-09 03:53:53,141 | INFO     | exeerrorcode: 65
[2026-01-08 19:54:26] 2026-01-09 03:53:53,141 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-01-08 19:54:26] 2026-01-09 03:53:53,141 | INFO     | exitcode: 65
[2026-01-08 19:54:26] 2026-01-09 03:53:53,141 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-01-08 19:54:26] 2026-01-09 03:53:53,141 | INFO     | cpuconsumptiontime: 17 s
[2026-01-08 19:54:26] 2026-01-09 03:53:53,141 | INFO     | nevents: 0
[2026-01-08 19:54:26] 2026-01-09 03:53:53,141 | INFO     | neventsw: 0
[2026-01-08 19:54:26] 2026-01-09 03:53:53,141 | INFO     | pid: 880291
[2026-01-08 19:54:26] 2026-01-09 03:53:53,141 | INFO     | pgrp: 880291
[2026-01-08 19:54:26] 2026-01-09 03:53:53,141 | INFO     | corecount: 12
[2026-01-08 19:54:26] 2026-01-09 03:53:53,141 | INFO     | event service: False
[2026-01-08 19:54:26] 2026-01-09 03:53:53,141 | INFO     | sizes: {0: 2283967, 5: 2284229, 11: 2284285, 27: 2307565, 29: 2311857, 32: 2311885, 152: 2312179}
[2026-01-08 19:54:26] 2026-01-09 03:53:53,141 | INFO     | --------------------------------------------------
[2026-01-08 19:54:26] 2026-01-09 03:53:53,141 | INFO     | 
[2026-01-08 19:54:26] 2026-01-09 03:53:53,142 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-01-08 19:54:26] 2026-01-09 03:53:53,155 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-08 19:54:26] 2026-01-09 03:53:53,156 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-08 19:54:26] 2026-01-09 03:53:53,156 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-08 19:54:26] 2026-01-09 03:53:53,156 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-08 19:54:26] 2026-01-09 03:53:53,156 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-08 19:54:26] 2026-01-09 03:53:53,156 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-08 19:54:26] 2026-01-09 03:53:53,156 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-08 19:54:26] 2026-01-09 03:53:53,156 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-08 19:54:26] 2026-01-09 03:53:53,156 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-08 19:54:26] 2026-01-09 03:53:53,156 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-08 19:54:26] 2026-01-09 03:53:53,156 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-08 19:54:26] 2026-01-09 03:53:53,156 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-08 19:54:26] 2026-01-09 03:53:53,156 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-08 19:54:26] 2026-01-09 03:53:53,156 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-08 19:54:26] 2026-01-09 03:53:53,156 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-08 19:54:26] 2026-01-09 03:53:53,156 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-08 19:54:26] 2026-01-09 03:53:53,156 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-08 19:54:26] 2026-01-09 03:53:53,156 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-08 19:54:26] 2026-01-09 03:53:53,156 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-08 19:54:26] 2026-01-09 03:53:53,157 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-08 19:54:26] 2026-01-09 03:53:53,157 | INFO     | job 6963161582 has completed (purged errors)
[2026-01-08 19:54:26] 2026-01-09 03:53:53,157 | INFO     | overall cleanup function is called
[2026-01-08 19:54:26] 2026-01-09 03:53:54,164 | INFO     | --- collectZombieJob: --- 10, [880291]
[2026-01-08 19:54:26] 2026-01-09 03:53:54,164 | INFO     | zombie collector waiting for pid 880291
[2026-01-08 19:54:26] 2026-01-09 03:53:54,164 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-08 19:54:26] 2026-01-09 03:53:54,164 | INFO     | collected zombie processes
[2026-01-08 19:54:26] 2026-01-09 03:53:54,164 | INFO     | will attempt to kill all subprocesses of pid=880291
[2026-01-08 19:54:26] 2026-01-09 03:53:54,366 | INFO     | process IDs to be killed: [880291] (in reverse order)
[2026-01-08 19:54:26] 2026-01-09 03:53:54,449 | WARNING  | found no corresponding commands to process id(s)
[2026-01-08 19:54:26] 2026-01-09 03:53:54,450 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-08 19:54:26] 2026-01-09 03:53:54,458 | INFO     | did not find any defunct processes belonging to 880291
[2026-01-08 19:54:26] 2026-01-09 03:53:54,466 | INFO     | did not find any defunct processes belonging to 880291
[2026-01-08 19:54:26] 2026-01-09 03:53:54,467 | INFO     | ready for new job
[2026-01-08 19:54:26] 2026-01-09 03:53:54,467 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-08 19:54:26] 2026-01-09 03:53:54,468 | INFO     | ***************************************
[2026-01-08 19:54:26] 2026-01-09 03:53:54,468 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-08 19:54:26] 2026-01-09 03:53:54,468 | INFO     | ***************************************
[2026-01-08 19:54:26] 2026-01-09 03:53:54,468 | INFO     | 
[2026-01-08 19:54:26] 2026-01-09 03:53:54,470 | INFO     | architecture information:
[2026-01-08 19:54:26] 2026-01-09 03:53:54,470 | INFO     | executing command: cat /etc/os-release
[2026-01-08 19:54:26] 2026-01-09 03:53:54,485 | INFO     | cat /etc/os-release:
[2026-01-08 19:54:26] NAME="CentOS Linux"
[2026-01-08 19:54:26] VERSION="7 (Core)"
[2026-01-08 19:54:26] ID="centos"
[2026-01-08 19:54:26] ID_LIKE="rhel fedora"
[2026-01-08 19:54:26] VERSION_ID="7"
[2026-01-08 19:54:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-08 19:54:26] ANSI_COLOR="0;31"
[2026-01-08 19:54:26] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-08 19:54:26] HOME_URL="https://www.centos.org/"
[2026-01-08 19:54:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-08 19:54:26] 
[2026-01-08 19:54:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-08 19:54:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-08 19:54:26] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-08 19:54:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-08 19:54:26] 
[2026-01-08 19:54:26] 2026-01-09 03:53:54,485 | INFO     | ***************************************
[2026-01-08 19:54:26] 2026-01-09 03:53:54,988 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-01-08 19:54:26] 2026-01-09 03:53:54,999 | INFO     | sufficient remaining disk space (1782397796352 B)
[2026-01-08 19:54:26] 2026-01-09 03:53:54,999 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-08 19:54:26] 2026-01-09 03:53:54,999 | INFO     | current server update state: UPDATING_FINAL
[2026-01-08 19:54:26] 2026-01-09 03:53:54,999 | INFO     | update_server=False
[2026-01-08 19:54:26] 2026-01-09 03:53:54,999 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-08 19:54:26] 2026-01-09 03:53:54,999 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-08 19:54:26] 2026-01-09 03:53:55,000 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-08 19:54:26] 2026-01-09 03:53:55,000 | INFO     | aborting loop
[2026-01-08 19:54:26] 2026-01-09 03:53:55,146 | INFO     | all payload control threads have been joined
[2026-01-08 19:54:26] 2026-01-09 03:53:55,255 | INFO     | all data control threads have been joined
[2026-01-08 19:54:26] 2026-01-09 03:53:55,405 | INFO     | all job control threads have been joined
[2026-01-08 19:54:26] 2026-01-09 03:53:55,503 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-08 19:54:26] 2026-01-09 03:53:56,005 | INFO     | [job] job monitor thread has finished
[2026-01-08 19:54:26] 2026-01-09 03:53:56,005 | INFO     | [job] queue monitor thread has finished
[2026-01-08 19:54:26] 2026-01-09 03:53:56,006 | INFO     | [job] retrieve thread has finished
[2026-01-08 19:54:26] 2026-01-09 03:53:56,027 | INFO     | [data] copytool_in thread has finished
[2026-01-08 19:54:26] 2026-01-09 03:53:56,152 | INFO     | [payload] control thread has finished
[2026-01-08 19:54:26] 2026-01-09 03:53:56,206 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-08 19:54:26] 2026-01-09 03:53:56,260 | INFO     | [data] control thread has finished
[2026-01-08 19:54:26] 2026-01-09 03:53:56,312 | INFO     | [payload] failed_post thread has finished
[2026-01-08 19:54:26] 2026-01-09 03:53:56,366 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-08 19:54:26] 2026-01-09 03:53:56,411 | INFO     | [job] control thread has finished
[2026-01-08 19:54:26] 2026-01-09 03:53:56,549 | INFO     | [payload] validate_post thread has finished
[2026-01-08 19:54:26] 2026-01-09 03:53:57,088 | INFO     | [job] validate thread has finished
[2026-01-08 19:54:26] 2026-01-09 03:53:57,212 | INFO     | [job] create_data_payload thread has finished
[2026-01-08 19:54:26] 2026-01-09 03:53:57,254 | INFO     | [payload] execute_payloads thread has finished
[2026-01-08 19:54:26] 2026-01-09 03:53:57,298 | INFO     | [payload] validate_pre thread has finished
[2026-01-08 19:54:26] 2026-01-09 03:53:57,508 | INFO     | [data] copytool_out thread has finished
[2026-01-08 19:54:26] 2026-01-09 03:54:00,214 | INFO     | [data] queue_monitor thread has finished
[2026-01-08 19:54:26] 2026-01-09 03:54:05,719 | INFO     | [monitor] cgroup control has ended
[2026-01-08 19:54:26] 2026-01-09 03:54:06,623 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139830654674752)>', '<ExcThread(monitor, started 139830325380864)>']
[2026-01-08 19:54:26] 2026-01-09 03:54:11,648 | INFO     | all workflow threads have been joined
[2026-01-08 19:54:26] 2026-01-09 03:54:11,648 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-08 19:54:26] 2026-01-09 03:54:11,648 | INFO     | traces error code: 0
[2026-01-08 19:54:26] 2026-01-09 03:54:11,648 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-08 19:54:26] 2026-01-09 03:54:26,048 | INFO     | PID=873728 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-08 19:54:26] 2026-01-09 03:54:26,048 | INFO     | .. there are 31 such processes running
[2026-01-08 19:54:26] 2026-01-09 03:54:26,049 | INFO     | found 0 job(s) in 20 queues
[2026-01-08 19:54:26] 2026-01-09 03:54:26,049 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-08 19:54:26] 2026-01-09 03:54:26,049 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-08 19:54:26] 2026-01-09 03:54:26,049 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-08 19:54:26] 2026-01-09 03:54:26,049 | CRITICAL | thread 'MainThread' is not alive
[2026-01-08 19:54:26] 2026-01-09 03:54:26,049 | INFO     | [monitor] control thread has ended
[2026-01-08 19:54:26] 2026-01-09 03:54:26,197 [wrapper] ==== pilot stdout END ====
[2026-01-08 19:54:26] 2026-01-09 03:54:26,199 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-08 19:54:26] 2026-01-09 03:54:26,201 [wrapper] pilotpid: 873728
[2026-01-08 19:54:26] 2026-01-09 03:54:26,204 [wrapper] Pilot exit status: 0
[2026-01-08 19:54:26] 2026-01-09 03:54:26,212 [wrapper] pandaids: 6963161582
[2026-01-08 19:54:26] 2026-01-09 03:54:26,255 [wrapper] cleanup supervisor_pilot  873734 873729
[2026-01-08 19:54:26] 2026-01-09 03:54:26,257 [wrapper] Test setup, not cleaning
[2026-01-08 19:54:26] 2026-01-09 03:54:26,259 [wrapper] apfmon messages muted
[2026-01-08 19:54:26] 2026-01-09 03:54:26,260 [wrapper] ==== wrapper stdout END ====
[2026-01-08 19:54:26] 2026-01-09 03:54:26,262 [wrapper] ==== wrapper stderr END ====
[2026-01-08 19:54:26]  *** Error codes and diagnostics ***
[2026-01-08 19:54:26]     "exeErrorCode": 65,
[2026-01-08 19:54:26]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-01-08 19:54:26]     "pilotErrorCode": 1305,
[2026-01-08 19:54:26]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-01-08 19:54:26]  *** Listing of results directory ***
[2026-01-08 19:54:26] total 221820
[2026-01-08 19:54:26] -rw-r--r--. 1 boinc boinc    579449 Jan  8 13:44 pilot3.tar.gz
[2026-01-08 19:54:26] -rwx------. 1 boinc boinc     36322 Jan  8 13:46 runpilot2-wrapper.sh
[2026-01-08 19:54:26] -rw-r--r--. 1 boinc boinc      5112 Jan  8 13:47 queuedata.json
[2026-01-08 19:54:26] -rw-r--r--. 1 boinc boinc       100 Jan  8 19:50 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-08 19:54:26] -rwxr-xr-x. 1 boinc boinc      7986 Jan  8 19:50 run_atlas
[2026-01-08 19:54:26] -rw-r--r--. 1 boinc boinc       105 Jan  8 19:50 job.xml
[2026-01-08 19:54:26] -rw-r--r--. 1 boinc boinc      6595 Jan  8 19:50 init_data.xml
[2026-01-08 19:54:26] -rw-r--r--. 2 boinc boinc 223024405 Jan  8 19:50 EVNT.47898824._001285.pool.root.1
[2026-01-08 19:54:26] -rw-r--r--. 2 boinc boinc     15847 Jan  8 19:50 start_atlas.sh
[2026-01-08 19:54:26] drwxrwx--x. 2 boinc boinc      4096 Jan  8 19:50 shared
[2026-01-08 19:54:26] -rw-r--r--. 2 boinc boinc    592395 Jan  8 19:50 input.tar.gz
[2026-01-08 19:54:26] -rw-r--r--. 1 boinc boinc         0 Jan  8 19:50 boinc_lockfile
[2026-01-08 19:54:26] -rw-r--r--. 1 boinc boinc      2519 Jan  8 19:50 pandaJob.out
[2026-01-08 19:54:26] -rw-------. 1 boinc boinc    989771 Jan  8 19:51 agis_schedconf.cvmfs.json
[2026-01-08 19:54:26] -rw-------. 1 boinc boinc   1516240 Jan  8 19:51 agis_ddmendpoints.agis.ALL.json
[2026-01-08 19:54:26] drwx------. 5 boinc boinc      4096 Jan  8 19:51 pilot3
[2026-01-08 19:54:26] -rw-r--r--. 1 boinc boinc       521 Jan  8 19:51 boinc_task_state.xml
[2026-01-08 19:54:26] -rw-------. 1 boinc boinc       954 Jan  8 19:51 memory_monitor_summary.json
[2026-01-08 19:54:26] -rw-------. 1 boinc boinc     20829 Jan  8 19:51 log.47898826._033244.job.log.tgz.1
[2026-01-08 19:54:26] -rw-------. 1 boinc boinc      8387 Jan  8 19:53 heartbeat.json
[2026-01-08 19:54:26] -rw-r--r--. 1 boinc boinc      8192 Jan  8 19:54 boinc_mmap_file
[2026-01-08 19:54:26] -rw-r--r--. 1 boinc boinc        22 Jan  8 19:54 wrapper_checkpoint.txt
[2026-01-08 19:54:26] -rw-------. 1 boinc boinc       892 Jan  8 19:54 pilotlog.txt
[2026-01-08 19:54:26] -rw-------. 1 boinc boinc        95 Jan  8 19:54 pilot_heartbeat.json
[2026-01-08 19:54:26] -rw-------. 1 boinc boinc     83229 Jan  8 19:54 log.47898826._033244.job.log.1
[2026-01-08 19:54:26] -rw-------. 1 boinc boinc       188 Jan  8 19:54 output.list
[2026-01-08 19:54:26] -rw-r--r--. 1 boinc boinc       620 Jan  8 19:54 runtime_log
[2026-01-08 19:54:26] -rw-------. 1 boinc boinc    122880 Jan  8 19:54 result.tar.gz
[2026-01-08 19:54:26] -rw-r--r--. 1 boinc boinc      8636 Jan  8 19:54 runtime_log.err
[2026-01-08 19:54:26] -rw-------. 1 boinc boinc       644 Jan  8 19:54 oD8KDmG1Cy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm1UlKDmzTEpSm.diag
[2026-01-08 19:54:26] -rw-r--r--. 1 boinc boinc     21617 Jan  8 19:54 stderr.txt
[2026-01-08 19:54:26] No HITS result produced
[2026-01-08 19:54:26]  *** Contents of shared directory: ***
[2026-01-08 19:54:26] total 218520
[2026-01-08 19:54:26] -rw-r--r--. 2 boinc boinc 223024405 Jan  8 19:50 ATLAS.root_0
[2026-01-08 19:54:26] -rw-r--r--. 2 boinc boinc     15847 Jan  8 19:50 start_atlas.sh
[2026-01-08 19:54:26] -rw-r--r--. 2 boinc boinc    592395 Jan  8 19:50 input.tar.gz
[2026-01-08 19:54:26] -rw-------. 1 boinc boinc    122880 Jan  8 19:54 result.tar.gz
19:54:27 (870073): run_atlas exited; CPU time 22.634828
19:54:27 (870073): called boinc_finish(0)

</stderr_txt>
]]>

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