Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:38:52 (6143): wrapper (7.7.26015): starting
12:38:52 (6143): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 12:38:52] Arguments: --nthreads 8
[2026-01-09 12:38:52] Threads: 8
[2026-01-09 12:38:52] Checking for CVMFS
[2026-01-09 12:38:52] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 12:38:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 12:38:52] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 12:38:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 12:38:52] 2.11.2.0 3545 35363 89248 154942 3 57 21581529 25165825 0 130560 0 17612222 99.835 8647441 2686 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-09 12:38:52] CVMFS is ok
[2026-01-09 12:38:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 12:38:52] Checking for apptainer binary...
[2026-01-09 12:38:52] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 12:38:52] Running /usr/bin/apptainer --version
[2026-01-09 12:38:52] apptainer version 1.3.2-1.el7
[2026-01-09 12:38:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 12:38:53] cg-vwn466.simple-grid.lan
[2026-01-09 12:38:53] apptainer works
[2026-01-09 12:38:53] Set ATHENA_PROC_NUMBER=8
[2026-01-09 12:38:53] Set ATHENA_CORE_NUMBER=8
[2026-01-09 12:38:53] Starting ATLAS job with PandaID=6963160817
[2026-01-09 12:38:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 15:15:29]  *** The last 200 lines of the pilot log: ***
[2026-01-09 15:15:29] 2026-01-09 14:14:39,509 | INFO     | PID=9890 has CPU usage=8.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-09 15:15:29] 2026-01-09 14:14:40,097 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 15:15:29] 2026-01-09 14:14:40,098 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 2250.0
[2026-01-09 15:15:29] 2026-01-09 14:14:40,100 | INFO     | using path: /var/lib/boinc/slots/5/PanDA_Pilot-6963160817/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 15:15:29] 2026-01-09 14:14:40,101 | INFO     | extracted standard info from prmon json
[2026-01-09 15:15:29] 2026-01-09 14:14:40,101 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 15:15:29] 2026-01-09 14:14:40,101 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 15:15:29] 2026-01-09 14:14:40,102 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 15:15:29] 2026-01-09 14:14:40,102 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 15:15:29] 2026-01-09 14:14:40,106 | INFO     | fitting pss+swap vs Time
[2026-01-09 15:15:29] 2026-01-09 14:14:40,106 | INFO     | sum of square deviations: 1110539892.0
[2026-01-09 15:15:29] 2026-01-09 14:14:40,107 | INFO     | sum of deviations: -21189385841.0
[2026-01-09 15:15:29] 2026-01-09 14:14:40,107 | INFO     | mean x: 1767963421.0
[2026-01-09 15:15:29] 2026-01-09 14:14:40,107 | INFO     | mean y: 2552463.0784313725
[2026-01-09 15:15:29] 2026-01-09 14:14:40,108 | INFO     | intersect: 33735747776.64518
[2026-01-09 15:15:29] 2026-01-09 14:14:40,108 | INFO     | chi2: 2.5305564528872586
[2026-01-09 15:15:29] 2026-01-09 14:14:40,108 | INFO     | sum of square deviations: 1005179777.0
[2026-01-09 15:15:29] 2026-01-09 14:14:40,109 | INFO     | sum of deviations: -9610418422.999996
[2026-01-09 15:15:29] 2026-01-09 14:14:40,109 | INFO     | mean x: 1767963268.5
[2026-01-09 15:15:29] 2026-01-09 14:14:40,109 | INFO     | mean y: 2568836.891891892
[2026-01-09 15:15:29] 2026-01-09 14:14:40,110 | INFO     | intersect: 16905880220.144768
[2026-01-09 15:15:29] 2026-01-09 14:14:40,110 | INFO     | chi2: 1.7705092640111266
[2026-01-09 15:15:29] 2026-01-09 14:14:40,110 | INFO     | current chi2=1.7705092640111266 (change=30.034784958420907 %)
[2026-01-09 15:15:29] 2026-01-09 14:14:40,110 | INFO     | sum of square deviations: 906703512.0
[2026-01-09 15:15:29] 2026-01-09 14:14:40,111 | INFO     | sum of deviations: -8311031924.999998
[2026-01-09 15:15:29] 2026-01-09 14:14:40,111 | INFO     | mean x: 1767963116.0
[2026-01-09 15:15:29] 2026-01-09 14:14:40,111 | INFO     | mean y: 2570849.888111888
[2026-01-09 15:15:29] 2026-01-09 14:14:40,112 | INFO     | intersect: 16208086439.970524
[2026-01-09 15:15:29] 2026-01-09 14:14:40,112 | INFO     | chi2: 1.7716374929799916
[2026-01-09 15:15:29] 2026-01-09 14:14:40,112 | INFO     | current chi2=1.7716374929799916 (change=-0.0637234151663782 %)
[2026-01-09 15:15:29] 2026-01-09 14:14:40,112 | INFO     | right removable region: 142
[2026-01-09 15:15:29] 2026-01-09 14:14:40,113 | INFO     | sum of square deviations: 1005179777.0
[2026-01-09 15:15:29] 2026-01-09 14:14:40,114 | INFO     | sum of deviations: -45379694742.0
[2026-01-09 15:15:29] 2026-01-09 14:14:40,114 | INFO     | mean x: 1767963573.5
[2026-01-09 15:15:29] 2026-01-09 14:14:40,114 | INFO     | mean y: 2586967.608108108
[2026-01-09 15:15:29] 2026-01-09 14:14:40,114 | INFO     | intersect: 79818804042.58163
[2026-01-09 15:15:29] 2026-01-09 14:14:40,114 | INFO     | chi2: 0.9909763187461469
[2026-01-09 15:15:29] 2026-01-09 14:14:40,114 | INFO     | current chi2=0.9909763187461469 (change=60.839588557074684 %)
[2026-01-09 15:15:29] 2026-01-09 14:14:40,115 | INFO     | sum of square deviations: 906703512.0
[2026-01-09 15:15:29] 2026-01-09 14:14:40,116 | INFO     | sum of deviations: -47978558445.0
[2026-01-09 15:15:29] 2026-01-09 14:14:40,116 | INFO     | mean x: 1767963726.0
[2026-01-09 15:15:29] 2026-01-09 14:14:40,116 | INFO     | mean y: 2590940.4055944057
[2026-01-09 15:15:29] 2026-01-09 14:14:40,116 | INFO     | intersect: 93555058570.56403
[2026-01-09 15:15:29] 2026-01-09 14:14:40,116 | INFO     | chi2: 0.9243423811490667
[2026-01-09 15:15:29] 2026-01-09 14:14:40,116 | INFO     | current chi2=0.9243423811490667 (change=6.7240696206938715 %)
[2026-01-09 15:15:29] 2026-01-09 14:14:40,117 | INFO     | left removable region: 20
[2026-01-09 15:15:29] 2026-01-09 14:14:40,117 | INFO     | sum of square deviations: 563026370.5
[2026-01-09 15:15:29] 2026-01-09 14:14:40,118 | INFO     | sum of deviations: -28489286066.5
[2026-01-09 15:15:29] 2026-01-09 14:14:40,118 | INFO     | mean x: 1767963695.5
[2026-01-09 15:15:29] 2026-01-09 14:14:40,118 | INFO     | mean y: 2603494.4836065574
[2026-01-09 15:15:29] 2026-01-09 14:14:40,118 | INFO     | intersect: 89462042901.48027
[2026-01-09 15:15:29] 2026-01-09 14:14:40,118 | INFO     | chi2: 0.11726292143545382
[2026-01-09 15:15:29] 2026-01-09 14:14:40,118 | INFO     | current memory leak: -50.60 B/s (using 122 data points, chi2=0.12)
[2026-01-09 15:15:29] 2026-01-09 14:14:40,119 | INFO     | could have reported an average CPU frequency of 2250 MHz (8 samples)
[2026-01-09 15:15:29] 2026-01-09 14:14:40,119 | INFO     | ..............................
[2026-01-09 15:15:29] 2026-01-09 14:14:40,119 | INFO     | . Timing measurements:
[2026-01-09 15:15:29] 2026-01-09 14:14:40,120 | INFO     | . get job = 0 s
[2026-01-09 15:15:29] 2026-01-09 14:14:40,120 | INFO     | . initial setup = 2 s
[2026-01-09 15:15:29] 2026-01-09 14:14:40,120 | INFO     | . payload setup = 9 s
[2026-01-09 15:15:29] 2026-01-09 14:14:40,120 | INFO     | . stage-in = 0 s
[2026-01-09 15:15:29] 2026-01-09 14:14:40,120 | INFO     | . payload execution = 9292 s
[2026-01-09 15:15:29] 2026-01-09 14:14:40,120 | INFO     | . stage-out = 1 s
[2026-01-09 15:15:29] 2026-01-09 14:14:40,120 | INFO     | . log creation = 0 s
[2026-01-09 15:15:29] 2026-01-09 14:14:40,120 | INFO     | ..............................
[2026-01-09 15:15:29] 2026-01-09 14:14:40,224 | INFO     | 
[2026-01-09 15:15:29] 2026-01-09 14:14:40,224 | INFO     | job summary report
[2026-01-09 15:15:29] 2026-01-09 14:14:40,225 | INFO     | --------------------------------------------------
[2026-01-09 15:15:29] 2026-01-09 14:14:40,225 | INFO     | PanDA job id: 6963160817
[2026-01-09 15:15:29] 2026-01-09 14:14:40,225 | INFO     | task id: 47898826
[2026-01-09 15:15:29] 2026-01-09 14:14:40,225 | INFO     | errors: (none)
[2026-01-09 15:15:29] 2026-01-09 14:14:40,225 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 15:15:29] 2026-01-09 14:14:40,225 | INFO     | pilot state: finished 
[2026-01-09 15:15:29] 2026-01-09 14:14:40,225 | INFO     | transexitcode: 0
[2026-01-09 15:15:29] 2026-01-09 14:14:40,225 | INFO     | exeerrorcode: 0
[2026-01-09 15:15:29] 2026-01-09 14:14:40,225 | INFO     | exeerrordiag: 
[2026-01-09 15:15:29] 2026-01-09 14:14:40,225 | INFO     | exitcode: 0
[2026-01-09 15:15:29] 2026-01-09 14:14:40,225 | INFO     | exitmsg: OK
[2026-01-09 15:15:29] 2026-01-09 14:14:40,225 | INFO     | cpuconsumptiontime: 68946 s
[2026-01-09 15:15:29] 2026-01-09 14:14:40,225 | INFO     | nevents: 400
[2026-01-09 15:15:29] 2026-01-09 14:14:40,225 | INFO     | neventsw: 0
[2026-01-09 15:15:29] 2026-01-09 14:14:40,226 | INFO     | pid: 16318
[2026-01-09 15:15:29] 2026-01-09 14:14:40,226 | INFO     | pgrp: 16318
[2026-01-09 15:15:29] 2026-01-09 14:14:40,226 | INFO     | corecount: 8
[2026-01-09 15:15:29] 2026-01-09 14:14:40,226 | INFO     | event service: False
[2026-01-09 15:15:29] 2026-01-09 14:14:40,226 | INFO     | sizes: {0: 2283971, 7: 2284233, 11: 2284261, 9304: 2312197, 9305: 2312196, 9306: 2321434, 9314: 2321572}
[2026-01-09 15:15:29] 2026-01-09 14:14:40,226 | INFO     | --------------------------------------------------
[2026-01-09 15:15:29] 2026-01-09 14:14:40,226 | INFO     | 
[2026-01-09 15:15:29] 2026-01-09 14:14:40,226 | INFO     | executing command: ls -lF /var/lib/boinc/slots/5
[2026-01-09 15:15:29] 2026-01-09 14:14:40,260 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 15:15:29] 2026-01-09 14:14:40,260 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 15:15:29] 2026-01-09 14:14:40,260 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 15:15:29] 2026-01-09 14:14:40,260 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 15:15:29] 2026-01-09 14:14:40,261 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 15:15:29] 2026-01-09 14:14:40,261 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 15:15:29] 2026-01-09 14:14:40,261 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 15:15:29] 2026-01-09 14:14:40,261 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 15:15:29] 2026-01-09 14:14:40,261 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 15:15:29] 2026-01-09 14:14:40,261 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 15:15:29] 2026-01-09 14:14:40,261 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 15:15:29] 2026-01-09 14:14:40,261 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 15:15:29] 2026-01-09 14:14:40,261 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 15:15:29] 2026-01-09 14:14:40,261 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 15:15:29] 2026-01-09 14:14:40,262 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 15:15:29] 2026-01-09 14:14:40,262 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 15:15:29] 2026-01-09 14:14:40,262 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 15:15:29] 2026-01-09 14:14:40,262 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 15:15:29] 2026-01-09 14:14:40,262 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 15:15:29] 2026-01-09 14:14:40,262 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 15:15:29] 2026-01-09 14:14:40,262 | INFO     | job 6963160817 has completed (purged errors)
[2026-01-09 15:15:29] 2026-01-09 14:14:40,262 | INFO     | overall cleanup function is called
[2026-01-09 15:15:29] 2026-01-09 14:14:41,270 | INFO     | --- collectZombieJob: --- 10, [16318]
[2026-01-09 15:15:29] 2026-01-09 14:14:41,271 | INFO     | zombie collector waiting for pid 16318
[2026-01-09 15:15:29] 2026-01-09 14:14:41,271 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 15:15:29] 2026-01-09 14:14:41,271 | INFO     | collected zombie processes
[2026-01-09 15:15:29] 2026-01-09 14:14:41,271 | INFO     | will attempt to kill all subprocesses of pid=16318
[2026-01-09 15:15:29] 2026-01-09 14:14:41,331 | INFO     | process IDs to be killed: [16318] (in reverse order)
[2026-01-09 15:15:29] 2026-01-09 14:14:41,379 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 15:15:29] 2026-01-09 14:14:41,379 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 15:15:29] 2026-01-09 14:14:41,381 | INFO     | did not find any defunct processes belonging to 16318
[2026-01-09 15:15:29] 2026-01-09 14:14:41,383 | INFO     | did not find any defunct processes belonging to 16318
[2026-01-09 15:15:29] 2026-01-09 14:14:41,383 | INFO     | ready for new job
[2026-01-09 15:15:29] 2026-01-09 14:14:41,383 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 15:15:29] 2026-01-09 14:14:41,385 | INFO     | ***************************************
[2026-01-09 15:15:29] 2026-01-09 14:14:41,385 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 15:15:29] 2026-01-09 14:14:41,385 | INFO     | ***************************************
[2026-01-09 15:15:29] 2026-01-09 14:14:41,385 | INFO     | 
[2026-01-09 15:15:29] 2026-01-09 14:14:41,386 | INFO     | pilot is running in a VM
[2026-01-09 15:15:29] 2026-01-09 14:14:41,386 | INFO     | architecture information:
[2026-01-09 15:15:29] 2026-01-09 14:14:41,388 | INFO     | executing command: cat /etc/os-release
[2026-01-09 15:15:29] 2026-01-09 14:14:41,413 | INFO     | cat /etc/os-release:
[2026-01-09 15:15:29] NAME="CentOS Linux"
[2026-01-09 15:15:29] VERSION="7 (Core)"
[2026-01-09 15:15:29] ID="centos"
[2026-01-09 15:15:29] ID_LIKE="rhel fedora"
[2026-01-09 15:15:29] VERSION_ID="7"
[2026-01-09 15:15:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 15:15:29] ANSI_COLOR="0;31"
[2026-01-09 15:15:29] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 15:15:29] HOME_URL="https://www.centos.org/"
[2026-01-09 15:15:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 15:15:29] 
[2026-01-09 15:15:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 15:15:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 15:15:29] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 15:15:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 15:15:29] 
[2026-01-09 15:15:29] 2026-01-09 14:14:41,413 | INFO     | ***************************************
[2026-01-09 15:15:29] 2026-01-09 14:14:41,916 | INFO     | executing command: df -mP /var/lib/boinc/slots/5
[2026-01-09 15:15:29] 2026-01-09 14:14:41,939 | INFO     | sufficient remaining disk space (498053677056 B)
[2026-01-09 15:15:29] 2026-01-09 14:14:41,940 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 15:15:29] 2026-01-09 14:14:41,940 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 15:15:29] 2026-01-09 14:14:41,940 | INFO     | update_server=False
[2026-01-09 15:15:29] 2026-01-09 14:14:41,940 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 15:15:29] 2026-01-09 14:14:41,940 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 15:15:29] 2026-01-09 14:14:42,508 | INFO     | all data control threads have been joined
[2026-01-09 15:15:29] 2026-01-09 14:14:42,724 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 15:15:29] 2026-01-09 14:14:42,738 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 15:15:29] 2026-01-09 14:14:42,738 | INFO     | aborting loop
[2026-01-09 15:15:29] 2026-01-09 14:14:42,809 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 15:15:29] 2026-01-09 14:14:42,942 | INFO     | [job] retrieve thread has finished
[2026-01-09 15:15:29] 2026-01-09 14:14:42,946 | INFO     | [job] queue monitor thread has finished
[2026-01-09 15:15:29] 2026-01-09 14:14:43,144 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 15:15:29] 2026-01-09 14:14:43,251 | INFO     | [payload] validate_post thread has finished
[2026-01-09 15:15:29] 2026-01-09 14:14:43,320 | INFO     | all payload control threads have been joined
[2026-01-09 15:15:29] 2026-01-09 14:14:43,368 | INFO     | [data] copytool_in thread has finished
[2026-01-09 15:15:29] 2026-01-09 14:14:43,490 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 15:15:29] 2026-01-09 14:14:43,513 | INFO     | [payload] failed_post thread has finished
[2026-01-09 15:15:29] 2026-01-09 14:14:43,514 | INFO     | [data] control thread has finished
[2026-01-09 15:15:29] 2026-01-09 14:14:43,530 | INFO     | all job control threads have been joined
[2026-01-09 15:15:29] 2026-01-09 14:14:43,744 | INFO     | [job] job monitor thread has finished
[2026-01-09 15:15:29] 2026-01-09 14:14:44,069 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 15:15:29] 2026-01-09 14:14:44,326 | INFO     | [payload] control thread has finished
[2026-01-09 15:15:29] 2026-01-09 14:14:44,443 | INFO     | [job] validate thread has finished
[2026-01-09 15:15:29] 2026-01-09 14:14:44,536 | INFO     | [job] control thread has finished
[2026-01-09 15:15:29] 2026-01-09 14:14:44,730 | INFO     | [data] copytool_out thread has finished
[2026-01-09 15:15:29] 2026-01-09 14:14:46,812 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 15:15:29] 2026-01-09 14:14:52,954 | INFO     | job.realtimelogging is not enabled
[2026-01-09 15:15:29] 2026-01-09 14:14:53,960 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 15:15:29] 2026-01-09 14:15:11,596 | INFO     | PID=9890 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-09 15:15:29] 2026-01-09 14:15:11,597 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 15:15:29] 2026-01-09 14:15:11,597 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 15:15:29] 2026-01-09 14:15:11,597 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 15:15:29] 2026-01-09 14:15:23,806 | INFO     | [monitor] cgroup control has ended
[2026-01-09 15:15:29] 2026-01-09 14:15:24,506 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139831557519168)>', '<ExcThread(monitor, started 139831330531072)>']
[2026-01-09 15:15:29] 2026-01-09 14:15:24,664 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 15:15:29] 2026-01-09 14:15:24,665 | INFO     | [monitor] control thread has ended
[2026-01-09 15:15:29] 2026-01-09 14:15:29,512 | INFO     | all workflow threads have been joined
[2026-01-09 15:15:29] 2026-01-09 14:15:29,512 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 15:15:29] 2026-01-09 14:15:29,513 | INFO     | traces error code: 0
[2026-01-09 15:15:29] 2026-01-09 14:15:29,513 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 15:15:29] 2026-01-09 14:15:29,650 [wrapper] ==== pilot stdout END ====
[2026-01-09 15:15:29] 2026-01-09 14:15:29,655 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 15:15:29] 2026-01-09 14:15:29,660 [wrapper] pilotpid: 9890
[2026-01-09 15:15:29] 2026-01-09 14:15:29,664 [wrapper] Pilot exit status: 0
[2026-01-09 15:15:29] 2026-01-09 14:15:29,688 [wrapper] pandaids: 6963160817
[2026-01-09 15:15:29] 2026-01-09 14:15:29,727 [wrapper] cleanup supervisor_pilot   661 9891
[2026-01-09 15:15:29] 2026-01-09 14:15:29,734 [wrapper] Test setup, not cleaning
[2026-01-09 15:15:29] 2026-01-09 14:15:29,741 [wrapper] apfmon messages muted
[2026-01-09 15:15:29] 2026-01-09 14:15:29,745 [wrapper] ==== wrapper stdout END ====
[2026-01-09 15:15:29] 2026-01-09 14:15:29,752 [wrapper] ==== wrapper stderr END ====
[2026-01-09 15:15:29]  *** Error codes and diagnostics ***
[2026-01-09 15:15:29]     "exeErrorCode": 0,
[2026-01-09 15:15:29]     "exeErrorDiag": "",
[2026-01-09 15:15:29]     "pilotErrorCode": 0,
[2026-01-09 15:15:29]     "pilotErrorDiag": "",
[2026-01-09 15:15:29]  *** Listing of results directory ***
[2026-01-09 15:15:29] total 440748
[2026-01-09 15:15:29] -rw-r--r--. 1 boinc boinc    579449 Jan  8 22:44 pilot3.tar.gz
[2026-01-09 15:15:29] -rwx------. 1 boinc boinc     36322 Jan  8 22:46 runpilot2-wrapper.sh
[2026-01-09 15:15:29] -rw-r--r--. 1 boinc boinc      5112 Jan  8 22:47 queuedata.json
[2026-01-09 15:15:29] -rw-r--r--. 1 boinc boinc       100 Jan  9 12:38 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 15:15:29] -rwxr-xr-x. 1 boinc boinc      7986 Jan  9 12:38 run_atlas
[2026-01-09 15:15:29] -rw-r--r--. 1 boinc boinc       105 Jan  9 12:38 job.xml
[2026-01-09 15:15:29] -rw-r--r--. 1 boinc boinc      6392 Jan  9 12:38 init_data.xml
[2026-01-09 15:15:29] -rw-r--r--. 2 boinc boinc 226284033 Jan  9 12:38 EVNT.47898824._001261.pool.root.1
[2026-01-09 15:15:29] -rw-r--r--. 2 boinc boinc     15847 Jan  9 12:38 start_atlas.sh
[2026-01-09 15:15:29] drwxrwx--x. 2 boinc boinc        68 Jan  9 12:38 shared
[2026-01-09 15:15:29] -rw-r--r--. 2 boinc boinc    592399 Jan  9 12:38 input.tar.gz
[2026-01-09 15:15:29] -rw-r--r--. 1 boinc boinc         0 Jan  9 12:38 boinc_lockfile
[2026-01-09 15:15:29] -rw-r--r--. 1 boinc boinc      2520 Jan  9 12:38 pandaJob.out
[2026-01-09 15:15:29] -rw-------. 1 boinc boinc    989377 Jan  9 12:39 agis_schedconf.cvmfs.json
[2026-01-09 15:15:29] -rw-------. 1 boinc boinc   1516240 Jan  9 12:39 agis_ddmendpoints.agis.ALL.json
[2026-01-09 15:15:29] drwx------. 5 boinc boinc      4096 Jan  9 12:39 pilot3
[2026-01-09 15:15:29] -rw-------. 1 boinc boinc 217860004 Jan  9 15:13 HITS.47898826._032640.pool.root.1
[2026-01-09 15:15:29] -rw-r--r--. 1 boinc boinc       529 Jan  9 15:13 boinc_task_state.xml
[2026-01-09 15:15:29] -rw-------. 1 boinc boinc      1016 Jan  9 15:14 memory_monitor_summary.json
[2026-01-09 15:15:29] -rw-------. 1 boinc boinc    391817 Jan  9 15:14 log.47898826._032640.job.log.tgz.1
[2026-01-09 15:15:29] -rw-------. 1 boinc boinc      7777 Jan  9 15:14 heartbeat.json
[2026-01-09 15:15:29] -rw-r--r--. 1 boinc boinc        27 Jan  9 15:15 wrapper_checkpoint.txt
[2026-01-09 15:15:29] -rw-r--r--. 1 boinc boinc      8192 Jan  9 15:15 boinc_mmap_file
[2026-01-09 15:15:29] -rw-------. 1 boinc boinc        95 Jan  9 15:15 pilot_heartbeat.json
[2026-01-09 15:15:29] -rw-------. 1 boinc boinc      4880 Jan  9 15:15 pilotlog.txt
[2026-01-09 15:15:29] -rw-------. 1 boinc boinc   1252455 Jan  9 15:15 log.47898826._032640.job.log.1
[2026-01-09 15:15:29] -rw-------. 1 boinc boinc       357 Jan  9 15:15 output.list
[2026-01-09 15:15:29] -rw-r--r--. 1 boinc boinc       620 Jan  9 15:15 runtime_log
[2026-01-09 15:15:29] -rw-------. 1 boinc boinc   1658880 Jan  9 15:15 result.tar.gz
[2026-01-09 15:15:29] -rw-r--r--. 1 boinc boinc      8816 Jan  9 15:15 runtime_log.err
[2026-01-09 15:15:29] -rw-------. 1 boinc boinc       652 Jan  9 15:15 kbCMDmq0Cy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmiFgKDmjDurdn.diag
[2026-01-09 15:15:29] -rw-r--r--. 1 boinc boinc     20794 Jan  9 15:15 stderr.txt
[2026-01-09 15:15:29] HITS file was successfully produced:
[2026-01-09 15:15:29] -rw-------. 1 boinc boinc 217860004 Jan  9 15:13 shared/HITS.pool.root.1
[2026-01-09 15:15:29]  *** Contents of shared directory: ***
[2026-01-09 15:15:29] total 435956
[2026-01-09 15:15:29] -rw-r--r--. 2 boinc boinc 226284033 Jan  9 12:38 ATLAS.root_0
[2026-01-09 15:15:29] -rw-r--r--. 2 boinc boinc     15847 Jan  9 12:38 start_atlas.sh
[2026-01-09 15:15:29] -rw-r--r--. 2 boinc boinc    592399 Jan  9 12:38 input.tar.gz
[2026-01-09 15:15:29] -rw-------. 1 boinc boinc 217860004 Jan  9 15:13 HITS.pool.root.1
[2026-01-09 15:15:29] -rw-------. 1 boinc boinc   1658880 Jan  9 15:15 result.tar.gz
15:15:31 (6143): run_atlas exited; CPU time 69004.230372
15:15:31 (6143): called boinc_finish(0)

</stderr_txt>
]]>

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