Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
14:58:31 (843259): wrapper (7.7.26015): starting
14:58:31 (843259): wrapper: running run_atlas (--nthreads 4)
[2026-01-09 14:58:31] Arguments: --nthreads 4
[2026-01-09 14:58:31] Threads: 4
[2026-01-09 14:58:31] Checking for CVMFS
[2026-01-09 14:58:32] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 14:58:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 14:58:32] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 14:58:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 14:58:32] 2.9.2.0 157024 2351 92176 154945 1 57 21835774 36864001 0 130560 0 1764922 99.990 86738 5177 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-09 14:58:32] CVMFS is ok
[2026-01-09 14:58:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 14:58:32] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 14:58:32] Further information can be found at the LHC@home message board.
[2026-01-09 14:58:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 14:58:32] Checking for apptainer binary...
[2026-01-09 14:58:32] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 14:58:32] Running /usr/bin/apptainer --version
[2026-01-09 14:58:32] apptainer version 1.4.1-1.1
[2026-01-09 14:58:32] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 14:58:32] atlasA139
[2026-01-09 14:58:32] apptainer works
[2026-01-09 14:58:32] Set ATHENA_PROC_NUMBER=4
[2026-01-09 14:58:32] Set ATHENA_CORE_NUMBER=4
[2026-01-09 14:58:32] Starting ATLAS job with PandaID=6963160844
[2026-01-09 14:58:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 16:34:53]  *** The last 200 lines of the pilot log: ***
[2026-01-09 16:34:53]  replicas=None
[2026-01-09 16:34:53]  scope=mc23_13p6TeV
[2026-01-09 16:34:53]  status=None
[2026-01-09 16:34:53]  status_code=0
[2026-01-09 16:34:53]  storage_token=
[2026-01-09 16:34:53]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6963160844/log.47898826._032667.job.log.tgz.1
[2026-01-09 16:34:53]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f9/42/log.47898826._032667.job.log.tgz.1
[2026-01-09 16:34:53]  workdir=None
[2026-01-09 16:34:53] ]
[2026-01-09 16:34:53] 2026-01-09 15:33:42,619 | INFO     | transferring file log.47898826._032667.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6963160844/log.47898826._032667.job.log.tgz.1 to /local/data/boinc/
[2026-01-09 16:34:53] 2026-01-09 15:33:42,619 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6963160844/log.47898826._032667.job.log.tgz.1 /local/data/boinc/slots/0/log.47898826._0326
[2026-01-09 16:34:53] 2026-01-09 15:33:42,638 | INFO     | adding to output.list: log.47898826._032667.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f9/42/log.47898826._032667.job.log.tg
[2026-01-09 16:34:53] 2026-01-09 15:33:42,638 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-09 16:34:53] 2026-01-09 15:33:42,638 | INFO     | summary of transferred files:
[2026-01-09 16:34:53] 2026-01-09 15:33:42,638 | INFO     |  -- lfn=log.47898826._032667.job.log.tgz.1, status_code=0, status=transferred
[2026-01-09 16:34:53] 2026-01-09 15:33:42,638 | INFO     | stage-out finished correctly
[2026-01-09 16:34:53] 2026-01-09 15:33:42,678 | INFO     | time since job start (5703s) is within the limit (349056.0s)
[2026-01-09 16:34:53] 2026-01-09 15:33:42,743 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-09 16:34:53] 2026-01-09 15:33:44,684 | INFO     | time since job start (5705s) is within the limit (349056.0s)
[2026-01-09 16:34:53] 2026-01-09 15:33:45,660 | INFO     | job 6963160844 has state=finished
[2026-01-09 16:34:53] 2026-01-09 15:33:45,660 | INFO     | preparing for final server update for job 6963160844 in state='finished'
[2026-01-09 16:34:53] 2026-01-09 15:33:45,661 | INFO     | this job has now completed (state=finished)
[2026-01-09 16:34:53] 2026-01-09 15:33:45,661 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-09 16:34:53] 2026-01-09 15:33:45,661 | INFO     | log transfer has been attempted: DONE
[2026-01-09 16:34:53] 2026-01-09 15:33:45,661 | INFO     | job 6963160844 has finished - writing final server update
[2026-01-09 16:34:53] 2026-01-09 15:33:45,661 | INFO     | total number of processed events: 400 (read)
[2026-01-09 16:34:53] 2026-01-09 15:33:45,662 | INFO     | executing command: lscpu
[2026-01-09 16:34:53] 2026-01-09 15:33:45,682 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-09 16:34:53] 2026-01-09 15:33:45,767 | INFO     | PID=847050 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-09 16:34:53] 2026-01-09 15:33:45,959 | WARNING  | process 853626 can no longer be monitored (due to stat problems) - aborting
[2026-01-09 16:34:53] 2026-01-09 15:33:45,959 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6963160844/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 16:34:53] 2026-01-09 15:33:46,022 | INFO     | number of running child processes to parent process 853626: 1
[2026-01-09 16:34:53] 2026-01-09 15:33:46,022 | INFO     | maximum number of monitored processes: 6
[2026-01-09 16:34:53] 2026-01-09 15:33:46,768 | INFO     | time since job start (5707s) is within the limit (349056.0s)
[2026-01-09 16:34:53] 2026-01-09 15:33:48,525 | INFO     | monitor loop #437: job 0:6963160844 is in state 'finished'
[2026-01-09 16:34:53] 2026-01-09 15:33:48,525 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 16:34:53] 2026-01-09 15:33:48,773 | INFO     | time since job start (5709s) is within the limit (349056.0s)
[2026-01-09 16:34:53] 2026-01-09 15:33:48,931 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 16:34:53] 2026-01-09 15:33:48,932 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 3531.1892499999994
[2026-01-09 16:34:53] 2026-01-09 15:33:48,934 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6963160844/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 16:34:53] 2026-01-09 15:33:48,934 | INFO     | extracted standard info from prmon json
[2026-01-09 16:34:53] 2026-01-09 15:33:48,934 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 16:34:53] 2026-01-09 15:33:48,934 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 16:34:53] 2026-01-09 15:33:48,934 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 16:34:53] 2026-01-09 15:33:48,934 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 16:34:53] 2026-01-09 15:33:48,935 | INFO     | fitting pss+swap vs Time
[2026-01-09 16:34:53] 2026-01-09 15:33:48,935 | INFO     | sum of square deviations: 204163828.0
[2026-01-09 16:34:53] 2026-01-09 15:33:48,935 | INFO     | sum of deviations: -8036674665.0
[2026-01-09 16:34:53] 2026-01-09 15:33:48,935 | INFO     | mean x: 1767970070.0
[2026-01-09 16:34:53] 2026-01-09 15:33:48,935 | INFO     | mean y: 2449229.942528736
[2026-01-09 16:34:53] 2026-01-09 15:33:48,935 | INFO     | intersect: 69596561023.5717
[2026-01-09 16:34:53] 2026-01-09 15:33:48,935 | INFO     | chi2: 0.11549546074896071
[2026-01-09 16:34:53] 2026-01-09 15:33:48,935 | INFO     | current memory leak: -39.36 B/s (using 87 data points, chi2=0.12)
[2026-01-09 16:34:53] 2026-01-09 15:33:48,935 | INFO     | could have reported an average CPU frequency of 3609 MHz (7 samples)
[2026-01-09 16:34:53] 2026-01-09 15:33:48,936 | INFO     | ..............................
[2026-01-09 16:34:53] 2026-01-09 15:33:48,936 | INFO     | . Timing measurements:
[2026-01-09 16:34:53] 2026-01-09 15:33:48,936 | INFO     | . get job = 0 s
[2026-01-09 16:34:53] 2026-01-09 15:33:48,936 | INFO     | . initial setup = 1 s
[2026-01-09 16:34:53] 2026-01-09 15:33:48,936 | INFO     | . payload setup = 4 s
[2026-01-09 16:34:53] 2026-01-09 15:33:48,936 | INFO     | . stage-in = 0 s
[2026-01-09 16:34:53] 2026-01-09 15:33:48,936 | INFO     | . payload execution = 5680 s
[2026-01-09 16:34:53] 2026-01-09 15:33:48,936 | INFO     | . stage-out = 0 s
[2026-01-09 16:34:53] 2026-01-09 15:33:48,936 | INFO     | . log creation = 0 s
[2026-01-09 16:34:53] 2026-01-09 15:33:48,936 | INFO     | ..............................
[2026-01-09 16:34:53] 2026-01-09 15:33:48,973 | INFO     | 
[2026-01-09 16:34:53] 2026-01-09 15:33:48,973 | INFO     | job summary report
[2026-01-09 16:34:53] 2026-01-09 15:33:48,973 | INFO     | --------------------------------------------------
[2026-01-09 16:34:53] 2026-01-09 15:33:48,973 | INFO     | PanDA job id: 6963160844
[2026-01-09 16:34:53] 2026-01-09 15:33:48,974 | INFO     | task id: 47898826
[2026-01-09 16:34:53] 2026-01-09 15:33:48,974 | INFO     | errors: (none)
[2026-01-09 16:34:53] 2026-01-09 15:33:48,974 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 16:34:53] 2026-01-09 15:33:48,974 | INFO     | pilot state: finished 
[2026-01-09 16:34:53] 2026-01-09 15:33:48,974 | INFO     | transexitcode: 0
[2026-01-09 16:34:53] 2026-01-09 15:33:48,974 | INFO     | exeerrorcode: 0
[2026-01-09 16:34:53] 2026-01-09 15:33:48,974 | INFO     | exeerrordiag: 
[2026-01-09 16:34:53] 2026-01-09 15:33:48,974 | INFO     | exitcode: 0
[2026-01-09 16:34:53] 2026-01-09 15:33:48,974 | INFO     | exitmsg: OK
[2026-01-09 16:34:53] 2026-01-09 15:33:48,974 | INFO     | cpuconsumptiontime: 21493 s
[2026-01-09 16:34:53] 2026-01-09 15:33:48,974 | INFO     | nevents: 400
[2026-01-09 16:34:53] 2026-01-09 15:33:48,974 | INFO     | neventsw: 0
[2026-01-09 16:34:53] 2026-01-09 15:33:48,974 | INFO     | pid: 853626
[2026-01-09 16:34:53] 2026-01-09 15:33:48,974 | INFO     | pgrp: 853626
[2026-01-09 16:34:53] 2026-01-09 15:33:48,974 | INFO     | corecount: 4
[2026-01-09 16:34:53] 2026-01-09 15:33:48,974 | INFO     | event service: False
[2026-01-09 16:34:53] 2026-01-09 15:33:48,974 | INFO     | sizes: {0: 2283974, 3: 2284236, 11: 2284264, 5687: 2311069, 5688: 2320129, 5695: 2320267}
[2026-01-09 16:34:53] 2026-01-09 15:33:48,974 | INFO     | --------------------------------------------------
[2026-01-09 16:34:53] 2026-01-09 15:33:48,974 | INFO     | 
[2026-01-09 16:34:53] 2026-01-09 15:33:48,974 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2026-01-09 16:34:53] 2026-01-09 15:33:48,992 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 16:34:53] 2026-01-09 15:33:48,992 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 16:34:53] 2026-01-09 15:33:48,992 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 16:34:53] 2026-01-09 15:33:48,992 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 16:34:53] 2026-01-09 15:33:48,992 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 16:34:53] 2026-01-09 15:33:48,992 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 16:34:53] 2026-01-09 15:33:48,992 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 16:34:53] 2026-01-09 15:33:48,992 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 16:34:53] 2026-01-09 15:33:48,992 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 16:34:53] 2026-01-09 15:33:48,992 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 16:34:53] 2026-01-09 15:33:48,992 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 16:34:53] 2026-01-09 15:33:48,992 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 16:34:53] 2026-01-09 15:33:48,992 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 16:34:53] 2026-01-09 15:33:48,992 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 16:34:53] 2026-01-09 15:33:48,993 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 16:34:53] 2026-01-09 15:33:48,993 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 16:34:53] 2026-01-09 15:33:48,993 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 16:34:53] 2026-01-09 15:33:48,993 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 16:34:53] 2026-01-09 15:33:48,993 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 16:34:53] 2026-01-09 15:33:48,993 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 16:34:53] 2026-01-09 15:33:48,993 | INFO     | job 6963160844 has completed (purged errors)
[2026-01-09 16:34:53] 2026-01-09 15:33:48,993 | INFO     | overall cleanup function is called
[2026-01-09 16:34:53] 2026-01-09 15:33:49,999 | INFO     | --- collectZombieJob: --- 10, [853626]
[2026-01-09 16:34:53] 2026-01-09 15:33:50,000 | INFO     | zombie collector waiting for pid 853626
[2026-01-09 16:34:53] 2026-01-09 15:33:50,000 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 16:34:53] 2026-01-09 15:33:50,000 | INFO     | collected zombie processes
[2026-01-09 16:34:53] 2026-01-09 15:33:50,000 | INFO     | will attempt to kill all subprocesses of pid=853626
[2026-01-09 16:34:53] 2026-01-09 15:33:50,045 | INFO     | process IDs to be killed: [853626] (in reverse order)
[2026-01-09 16:34:53] 2026-01-09 15:33:50,078 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 16:34:53] 2026-01-09 15:33:50,078 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 16:34:53] 2026-01-09 15:33:50,080 | INFO     | did not find any defunct processes belonging to 853626
[2026-01-09 16:34:53] 2026-01-09 15:33:50,081 | INFO     | did not find any defunct processes belonging to 853626
[2026-01-09 16:34:53] 2026-01-09 15:33:50,081 | INFO     | ready for new job
[2026-01-09 16:34:53] 2026-01-09 15:33:50,081 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 16:34:53] 2026-01-09 15:33:50,082 | INFO     | ***************************************
[2026-01-09 16:34:53] 2026-01-09 15:33:50,082 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 16:34:53] 2026-01-09 15:33:50,082 | INFO     | ***************************************
[2026-01-09 16:34:53] 2026-01-09 15:33:50,082 | INFO     | 
[2026-01-09 16:34:53] 2026-01-09 15:33:50,082 | INFO     | architecture information:
[2026-01-09 16:34:53] 2026-01-09 15:33:50,083 | INFO     | executing command: cat /etc/os-release
[2026-01-09 16:34:53] 2026-01-09 15:33:50,096 | INFO     | cat /etc/os-release:
[2026-01-09 16:34:53] NAME="CentOS Linux"
[2026-01-09 16:34:53] VERSION="7 (Core)"
[2026-01-09 16:34:53] ID="centos"
[2026-01-09 16:34:53] ID_LIKE="rhel fedora"
[2026-01-09 16:34:53] VERSION_ID="7"
[2026-01-09 16:34:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 16:34:53] ANSI_COLOR="0;31"
[2026-01-09 16:34:53] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 16:34:53] HOME_URL="https://www.centos.org/"
[2026-01-09 16:34:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 16:34:53] 
[2026-01-09 16:34:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 16:34:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 16:34:53] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 16:34:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 16:34:53] 
[2026-01-09 16:34:53] 2026-01-09 15:33:50,096 | INFO     | ***************************************
[2026-01-09 16:34:53] 2026-01-09 15:33:50,599 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-01-09 16:34:53] 2026-01-09 15:33:50,617 | INFO     | sufficient remaining disk space (337202118656 B)
[2026-01-09 16:34:53] 2026-01-09 15:33:50,617 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 16:34:53] 2026-01-09 15:33:50,617 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 16:34:53] 2026-01-09 15:33:50,617 | INFO     | update_server=False
[2026-01-09 16:34:53] 2026-01-09 15:33:50,617 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 16:34:53] 2026-01-09 15:33:50,618 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 16:34:53] 2026-01-09 15:33:50,618 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-01-09 16:34:53] 2026-01-09 15:33:50,618 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 16:34:53] 2026-01-09 15:33:50,618 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 16:34:53] 2026-01-09 15:33:50,618 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 16:34:53] 2026-01-09 15:33:50,691 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 16:34:53] 2026-01-09 15:33:51,029 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-09 16:34:53] 2026-01-09 15:33:51,029 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-09 16:34:53] 2026-01-09 15:33:51,029 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 16:34:53] 2026-01-09 15:33:51,029 | INFO     | will abort loop
[2026-01-09 16:34:53] 2026-01-09 15:33:51,299 | INFO     | all data control threads have been joined
[2026-01-09 16:34:53] 2026-01-09 15:33:51,623 | INFO     | [job] retrieve thread has finished
[2026-01-09 16:34:53] 2026-01-09 15:33:51,623 | INFO     | [job] queue monitor thread has finished
[2026-01-09 16:34:53] 2026-01-09 15:33:51,708 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 16:34:53] 2026-01-09 15:33:51,729 | INFO     | [data] copytool_in thread has finished
[2026-01-09 16:34:53] 2026-01-09 15:33:51,747 | INFO     | all job control threads have been joined
[2026-01-09 16:34:53] 2026-01-09 15:33:51,759 | INFO     | all payload control threads have been joined
[2026-01-09 16:34:53] 2026-01-09 15:33:52,035 | INFO     | [job] job monitor thread has finished
[2026-01-09 16:34:53] 2026-01-09 15:33:52,085 | INFO     | [payload] validate_post thread has finished
[2026-01-09 16:34:53] 2026-01-09 15:33:52,305 | INFO     | [data] control thread has finished
[2026-01-09 16:34:53] 2026-01-09 15:33:52,616 | INFO     | [payload] failed_post thread has finished
[2026-01-09 16:34:53] 2026-01-09 15:33:52,633 | INFO     | [job] validate thread has finished
[2026-01-09 16:34:53] 2026-01-09 15:33:52,697 | INFO     | [data] copytool_out thread has finished
[2026-01-09 16:34:53] 2026-01-09 15:33:52,748 | INFO     | [job] control thread has finished
[2026-01-09 16:34:53] 2026-01-09 15:33:52,764 | INFO     | [payload] control thread has finished
[2026-01-09 16:34:53] 2026-01-09 15:33:52,786 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 16:34:53] 2026-01-09 15:33:52,851 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 16:34:53] 2026-01-09 15:33:52,948 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 16:34:53] 2026-01-09 15:33:53,294 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 16:34:53] 2026-01-09 15:33:57,301 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 16:34:53] 2026-01-09 15:34:45,947 | INFO     | [monitor] cgroup control has ended
[2026-01-09 16:34:53] 2026-01-09 15:34:48,055 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140563148875584)>', '<ExcThread(monitor, started 140561923172096)>']
[2026-01-09 16:34:53] 2026-01-09 15:34:48,925 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 16:34:53] 2026-01-09 15:34:48,926 | INFO     | [monitor] control thread has ended
[2026-01-09 16:34:53] 2026-01-09 15:34:53,081 | INFO     | all workflow threads have been joined
[2026-01-09 16:34:53] 2026-01-09 15:34:53,081 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 16:34:53] 2026-01-09 15:34:53,081 | INFO     | traces error code: 0
[2026-01-09 16:34:53] 2026-01-09 15:34:53,082 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 16:34:53] 2026-01-09 15:34:53,151 [wrapper] ==== pilot stdout END ====
[2026-01-09 16:34:53] 2026-01-09 15:34:53,156 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 16:34:53] 2026-01-09 15:34:53,160 [wrapper] pilotpid: 847050
[2026-01-09 16:34:53] 2026-01-09 15:34:53,164 [wrapper] Pilot exit status: 0
[2026-01-09 16:34:53] 2026-01-09 15:34:53,176 [wrapper] pandaids: 6963160844
[2026-01-09 16:34:53] 2026-01-09 15:34:53,199 [wrapper] cleanup supervisor_pilot  865777 847051
[2026-01-09 16:34:53] 2026-01-09 15:34:53,202 [wrapper] Test setup, not cleaning
[2026-01-09 16:34:53] 2026-01-09 15:34:53,206 [wrapper] apfmon messages muted
[2026-01-09 16:34:53] 2026-01-09 15:34:53,209 [wrapper] ==== wrapper stdout END ====
[2026-01-09 16:34:53] 2026-01-09 15:34:53,213 [wrapper] ==== wrapper stderr END ====
[2026-01-09 16:34:53]  *** Error codes and diagnostics ***
[2026-01-09 16:34:53]     "exeErrorCode": 0,
[2026-01-09 16:34:53]     "exeErrorDiag": "",
[2026-01-09 16:34:53]     "pilotErrorCode": 0,
[2026-01-09 16:34:53]     "pilotErrorDiag": "",
[2026-01-09 16:34:53]  *** Listing of results directory ***
[2026-01-09 16:34:53] total 434068
[2026-01-09 16:34:53] -rw-r--r-- 1 boinc boinc    579449 Jan  8 22:44 pilot3.tar.gz
[2026-01-09 16:34:53] -rwx------ 1 boinc boinc     36322 Jan  8 22:46 runpilot2-wrapper.sh
[2026-01-09 16:34:53] -rw-r--r-- 1 boinc boinc      5112 Jan  8 22:47 queuedata.json
[2026-01-09 16:34:53] -rw-r--r-- 1 boinc boinc       100 Jan  9 14:58 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 16:34:53] -rwxr-xr-x 1 boinc boinc      7986 Jan  9 14:58 run_atlas
[2026-01-09 16:34:53] -rw-r--r-- 1 boinc boinc       105 Jan  9 14:58 job.xml
[2026-01-09 16:34:53] -rw-r--r-- 2 boinc boinc 222022961 Jan  9 14:58 EVNT.47898824._001262.pool.root.1
[2026-01-09 16:34:53] -rw-r--r-- 2 boinc boinc    592404 Jan  9 14:58 input.tar.gz
[2026-01-09 16:34:53] -rw-r--r-- 2 boinc boinc     15847 Jan  9 14:58 start_atlas.sh
[2026-01-09 16:34:53] drwxrwx--x 2 boinc boinc      4096 Jan  9 14:58 shared
[2026-01-09 16:34:53] -rw-r--r-- 1 boinc boinc         0 Jan  9 14:58 boinc_setup_complete
[2026-01-09 16:34:53] -rw-r--r-- 1 boinc boinc      6372 Jan  9 14:58 init_data.xml
[2026-01-09 16:34:53] -rw-r--r-- 1 boinc boinc         0 Jan  9 14:58 boinc_lockfile
[2026-01-09 16:34:53] -rw-r--r-- 1 boinc boinc      2520 Jan  9 14:58 pandaJob.out
[2026-01-09 16:34:53] -rw------- 1 boinc boinc    989377 Jan  9 14:58 agis_schedconf.cvmfs.json
[2026-01-09 16:34:53] -rw------- 1 boinc boinc   1516240 Jan  9 14:58 agis_ddmendpoints.agis.ALL.json
[2026-01-09 16:34:53] drwx------ 5 boinc boinc      4096 Jan  9 14:58 pilot3
[2026-01-09 16:34:53] -rw------- 1 boinc boinc        95 Jan  9 16:33 pilot_heartbeat.json
[2026-01-09 16:34:53] -rw------- 1 boinc boinc 216306900 Jan  9 16:33 HITS.47898826._032667.pool.root.1
[2026-01-09 16:34:53] -rw-r--r-- 1 boinc boinc       529 Jan  9 16:33 boinc_task_state.xml
[2026-01-09 16:34:53] -rw------- 1 boinc boinc      1019 Jan  9 16:33 memory_monitor_summary.json
[2026-01-09 16:34:53] -rw------- 1 boinc boinc    290941 Jan  9 16:33 log.47898826._032667.job.log.tgz.1
[2026-01-09 16:34:53] -rw------- 1 boinc boinc      7764 Jan  9 16:33 heartbeat.json
[2026-01-09 16:34:53] -rw-r--r-- 1 boinc boinc      8192 Jan  9 16:34 boinc_mmap_file
[2026-01-09 16:34:53] -rw-r--r-- 1 boinc boinc        27 Jan  9 16:34 wrapper_checkpoint.txt
[2026-01-09 16:34:53] -rw------- 1 boinc boinc      4742 Jan  9 16:34 pilotlog.txt
[2026-01-09 16:34:53] -rw------- 1 boinc boinc    830731 Jan  9 16:34 log.47898826._032667.job.log.1
[2026-01-09 16:34:53] -rw------- 1 boinc boinc       357 Jan  9 16:34 output.list
[2026-01-09 16:34:53] -rw-r--r-- 1 boinc boinc       620 Jan  9 16:34 runtime_log
[2026-01-09 16:34:53] -rw------- 1 boinc boinc   1136640 Jan  9 16:34 result.tar.gz
[2026-01-09 16:34:53] -rw-r--r-- 1 boinc boinc      8912 Jan  9 16:34 runtime_log.err
[2026-01-09 16:34:53] -rw------- 1 boinc boinc       662 Jan  9 16:34 dTQNDmq0Cy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmvRlKDmzC0Chn.diag
[2026-01-09 16:34:53] -rw-r--r-- 1 boinc boinc     21902 Jan  9 16:34 stderr.txt
[2026-01-09 16:34:53] HITS file was successfully produced:
[2026-01-09 16:34:53] -rw------- 1 boinc boinc 216306900 Jan  9 16:33 shared/HITS.pool.root.1
[2026-01-09 16:34:53]  *** Contents of shared directory: ***
[2026-01-09 16:34:53] total 429776
[2026-01-09 16:34:53] -rw-r--r-- 2 boinc boinc 222022961 Jan  9 14:58 ATLAS.root_0
[2026-01-09 16:34:53] -rw-r--r-- 2 boinc boinc    592404 Jan  9 14:58 input.tar.gz
[2026-01-09 16:34:53] -rw-r--r-- 2 boinc boinc     15847 Jan  9 14:58 start_atlas.sh
[2026-01-09 16:34:53] -rw------- 1 boinc boinc 216306900 Jan  9 16:33 HITS.pool.root.1
[2026-01-09 16:34:53] -rw------- 1 boinc boinc   1136640 Jan  9 16:34 result.tar.gz
16:34:55 (843259): run_atlas exited; CPU time 21511.957408
16:34:55 (843259): called boinc_finish(0)

</stderr_txt>
]]>

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