Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
22:27:13 (23202): wrapper (7.7.26015): starting
22:27:13 (23202): wrapper: running run_atlas (--nthreads 8)
[2026-01-08 22:27:13] Arguments: --nthreads 8
[2026-01-08 22:27:13] Threads: 8
[2026-01-08 22:27:13] Checking for CVMFS
[2026-01-08 22:27:13] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 22:27:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 22:27:14] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 22:27:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 22:27:14] 2.11.2.0 2776 105897 84700 154929 1 58 12474320 20275201 1 130560 0 21749801 99.791 6609213 31552 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-08 22:27:14] CVMFS is ok
[2026-01-08 22:27:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-08 22:27:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-08 22:27:14] Further information can be found at the LHC@home message board.
[2026-01-08 22:27:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 22:27:14] Checking for apptainer binary...
[2026-01-08 22:27:14] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-08 22:27:14] Running /usr/bin/apptainer --version
[2026-01-08 22:27:14] apptainer version 1.3.2-1.el7
[2026-01-08 22:27:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 22:27:15] c-115-7.aglt2.org
[2026-01-08 22:27:15] apptainer works
[2026-01-08 22:27:15] Set ATHENA_PROC_NUMBER=8
[2026-01-08 22:27:15] Set ATHENA_CORE_NUMBER=8
[2026-01-08 22:27:15] Starting ATLAS job with PandaID=6963152591
[2026-01-08 22:27:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 01:05:15]  *** The last 200 lines of the pilot log: ***
[2026-01-09 01:05:15] 2026-01-09 06:04:37,618 | INFO     | total number of processed events: 400 (read)
[2026-01-09 01:05:15] 2026-01-09 06:04:37,619 | INFO     | executing command: lscpu
[2026-01-09 01:05:15] 2026-01-09 06:04:37,646 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-09 01:05:15] 2026-01-09 06:04:38,210 | INFO     | time since job start (9426s) is within the limit (349056.0s)
[2026-01-09 01:05:15] 2026-01-09 06:04:39,819 | INFO     | monitor loop #699: job 0:6963152591 is in state 'finished'
[2026-01-09 01:05:15] 2026-01-09 06:04:39,819 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 01:05:15] 2026-01-09 06:04:40,217 | INFO     | time since job start (9428s) is within the limit (349056.0s)
[2026-01-09 01:05:15] 2026-01-09 06:04:42,222 | INFO     | time since job start (9430s) is within the limit (349056.0s)
[2026-01-09 01:05:15] 2026-01-09 06:04:42,322 | INFO     | monitor loop #700: job 0:6963152591 is in state 'finished'
[2026-01-09 01:05:15] 2026-01-09 06:04:42,322 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 01:05:15] 2026-01-09 06:04:43,236 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-09 01:05:15] 2026-01-09 06:04:43,240 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1729.125
[2026-01-09 01:05:15] 2026-01-09 06:04:43,241 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6963152591/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 01:05:15] 2026-01-09 06:04:43,242 | INFO     | extracted standard info from prmon json
[2026-01-09 01:05:15] 2026-01-09 06:04:43,242 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 01:05:15] 2026-01-09 06:04:43,242 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 01:05:15] 2026-01-09 06:04:43,243 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 01:05:15] 2026-01-09 06:04:43,243 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 01:05:15] 2026-01-09 06:04:43,246 | INFO     | fitting pss+swap vs Time
[2026-01-09 01:05:15] 2026-01-09 06:04:43,247 | INFO     | sum of square deviations: 1132458442.5
[2026-01-09 01:05:15] 2026-01-09 06:04:43,248 | INFO     | sum of deviations: -11938403574.0
[2026-01-09 01:05:15] 2026-01-09 06:04:43,248 | INFO     | mean x: 1767933949.5
[2026-01-09 01:05:15] 2026-01-09 06:04:43,248 | INFO     | mean y: 2567540.090909091
[2026-01-09 01:05:15] 2026-01-09 06:04:43,248 | INFO     | intersect: 18640168876.44788
[2026-01-09 01:05:15] 2026-01-09 06:04:43,248 | INFO     | chi2: 1.5467304664180441
[2026-01-09 01:05:15] 2026-01-09 06:04:43,249 | INFO     | sum of square deviations: 1025693650.0
[2026-01-09 01:05:15] 2026-01-09 06:04:43,250 | INFO     | sum of deviations: -11047518460.000002
[2026-01-09 01:05:15] 2026-01-09 06:04:43,250 | INFO     | mean x: 1767933797.0
[2026-01-09 01:05:15] 2026-01-09 06:04:43,250 | INFO     | mean y: 2568813.053691275
[2026-01-09 01:05:15] 2026-01-09 06:04:43,250 | INFO     | intersect: 19044591017.651913
[2026-01-09 01:05:15] 2026-01-09 06:04:43,250 | INFO     | chi2: 1.5458882914241139
[2026-01-09 01:05:15] 2026-01-09 06:04:43,250 | INFO     | current chi2=1.5458882914241139 (change=0.05444872343405596 %)
[2026-01-09 01:05:15] 2026-01-09 06:04:43,251 | INFO     | right removable region: 148
[2026-01-09 01:05:15] 2026-01-09 06:04:43,251 | INFO     | sum of square deviations: 1025693650.0
[2026-01-09 01:05:15] 2026-01-09 06:04:43,252 | INFO     | sum of deviations: -34095591076.0
[2026-01-09 01:05:15] 2026-01-09 06:04:43,252 | INFO     | mean x: 1767934102.0
[2026-01-09 01:05:15] 2026-01-09 06:04:43,252 | INFO     | mean y: 2598694.825503356
[2026-01-09 01:05:15] 2026-01-09 06:04:43,252 | INFO     | intersect: 58771372578.82807
[2026-01-09 01:05:15] 2026-01-09 06:04:43,252 | INFO     | chi2: 0.15131313749726008
[2026-01-09 01:05:15] 2026-01-09 06:04:43,253 | INFO     | current chi2=0.15131313749726008 (change=90.21722654447515 %)
[2026-01-09 01:05:15] 2026-01-09 06:04:43,253 | INFO     | sum of square deviations: 925859220.0
[2026-01-09 01:05:15] 2026-01-09 06:04:43,254 | INFO     | sum of deviations: -32440502354.0
[2026-01-09 01:05:15] 2026-01-09 06:04:43,254 | INFO     | mean x: 1767934254.5
[2026-01-09 01:05:15] 2026-01-09 06:04:43,254 | INFO     | mean y: 2596104.861111111
[2026-01-09 01:05:15] 2026-01-09 06:04:43,254 | INFO     | intersect: 61947948169.1031
[2026-01-09 01:05:15] 2026-01-09 06:04:43,254 | INFO     | chi2: 0.13821403452050535
[2026-01-09 01:05:15] 2026-01-09 06:04:43,254 | INFO     | current chi2=0.13821403452050535 (change=8.656950211604677 %)
[2026-01-09 01:05:15] 2026-01-09 06:04:43,254 | INFO     | left removable region: 20
[2026-01-09 01:05:15] 2026-01-09 06:04:43,255 | INFO     | sum of square deviations: 650252192.0
[2026-01-09 01:05:15] 2026-01-09 06:04:43,255 | INFO     | sum of deviations: -22904815214.0
[2026-01-09 01:05:15] 2026-01-09 06:04:43,255 | INFO     | mean x: 1767934376.5
[2026-01-09 01:05:15] 2026-01-09 06:04:43,256 | INFO     | mean y: 2584509.71875
[2026-01-09 01:05:15] 2026-01-09 06:04:43,256 | INFO     | intersect: 62277207651.951546
[2026-01-09 01:05:15] 2026-01-09 06:04:43,256 | INFO     | chi2: 0.1281627485058051
[2026-01-09 01:05:15] 2026-01-09 06:04:43,256 | INFO     | current memory leak: -35.22 B/s (using 128 data points, chi2=0.13)
[2026-01-09 01:05:15] 2026-01-09 06:04:43,256 | INFO     | could have reported an average CPU frequency of 2159 MHz (9 samples)
[2026-01-09 01:05:15] 2026-01-09 06:04:43,257 | INFO     | ..............................
[2026-01-09 01:05:15] 2026-01-09 06:04:43,257 | INFO     | . Timing measurements:
[2026-01-09 01:05:15] 2026-01-09 06:04:43,257 | INFO     | . get job = 0 s
[2026-01-09 01:05:15] 2026-01-09 06:04:43,257 | INFO     | . initial setup = 2 s
[2026-01-09 01:05:15] 2026-01-09 06:04:43,257 | INFO     | . payload setup = 7 s
[2026-01-09 01:05:15] 2026-01-09 06:04:43,257 | INFO     | . stage-in = 0 s
[2026-01-09 01:05:15] 2026-01-09 06:04:43,257 | INFO     | . payload execution = 9393 s
[2026-01-09 01:05:15] 2026-01-09 06:04:43,257 | INFO     | . stage-out = 0 s
[2026-01-09 01:05:15] 2026-01-09 06:04:43,257 | INFO     | . log creation = 0 s
[2026-01-09 01:05:15] 2026-01-09 06:04:43,258 | INFO     | ..............................
[2026-01-09 01:05:15] 2026-01-09 06:04:43,560 | INFO     | 
[2026-01-09 01:05:15] 2026-01-09 06:04:43,561 | INFO     | job summary report
[2026-01-09 01:05:15] 2026-01-09 06:04:43,561 | INFO     | --------------------------------------------------
[2026-01-09 01:05:15] 2026-01-09 06:04:43,561 | INFO     | PanDA job id: 6963152591
[2026-01-09 01:05:15] 2026-01-09 06:04:43,561 | INFO     | task id: 47898826
[2026-01-09 01:05:15] 2026-01-09 06:04:43,561 | INFO     | errors: (none)
[2026-01-09 01:05:15] 2026-01-09 06:04:43,562 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 01:05:15] 2026-01-09 06:04:43,562 | INFO     | pilot state: finished 
[2026-01-09 01:05:15] 2026-01-09 06:04:43,562 | INFO     | transexitcode: 0
[2026-01-09 01:05:15] 2026-01-09 06:04:43,562 | INFO     | exeerrorcode: 0
[2026-01-09 01:05:15] 2026-01-09 06:04:43,562 | INFO     | exeerrordiag: 
[2026-01-09 01:05:15] 2026-01-09 06:04:43,563 | INFO     | exitcode: 0
[2026-01-09 01:05:15] 2026-01-09 06:04:43,563 | INFO     | exitmsg: OK
[2026-01-09 01:05:15] 2026-01-09 06:04:43,563 | INFO     | cpuconsumptiontime: 70108 s
[2026-01-09 01:05:15] 2026-01-09 06:04:43,563 | INFO     | nevents: 400
[2026-01-09 01:05:15] 2026-01-09 06:04:43,563 | INFO     | neventsw: 0
[2026-01-09 01:05:15] 2026-01-09 06:04:43,564 | INFO     | pid: 865
[2026-01-09 01:05:15] 2026-01-09 06:04:43,564 | INFO     | pgrp: 865
[2026-01-09 01:05:15] 2026-01-09 06:04:43,564 | INFO     | corecount: 8
[2026-01-09 01:05:15] 2026-01-09 06:04:43,564 | INFO     | event service: False
[2026-01-09 01:05:15] 2026-01-09 06:04:43,564 | INFO     | sizes: {0: 2283795, 1: 2283994, 6: 2284256, 11: 2284284, 9405: 2312644, 9406: 2321642, 9408: 2321826, 9413: 2322084}
[2026-01-09 01:05:15] 2026-01-09 06:04:43,564 | INFO     | --------------------------------------------------
[2026-01-09 01:05:15] 2026-01-09 06:04:43,565 | INFO     | 
[2026-01-09 01:05:15] 2026-01-09 06:04:43,565 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-09 01:05:15] 2026-01-09 06:04:43,594 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 01:05:15] 2026-01-09 06:04:43,594 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 01:05:15] 2026-01-09 06:04:43,595 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 01:05:15] 2026-01-09 06:04:43,595 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 01:05:15] 2026-01-09 06:04:43,595 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 01:05:15] 2026-01-09 06:04:43,596 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 01:05:15] 2026-01-09 06:04:43,596 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 01:05:15] 2026-01-09 06:04:43,596 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 01:05:15] 2026-01-09 06:04:43,596 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 01:05:15] 2026-01-09 06:04:43,596 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 01:05:15] 2026-01-09 06:04:43,597 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 01:05:15] 2026-01-09 06:04:43,597 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 01:05:15] 2026-01-09 06:04:43,597 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 01:05:15] 2026-01-09 06:04:43,597 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 01:05:15] 2026-01-09 06:04:43,597 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 01:05:15] 2026-01-09 06:04:43,598 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 01:05:15] 2026-01-09 06:04:43,598 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 01:05:15] 2026-01-09 06:04:43,598 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 01:05:15] 2026-01-09 06:04:43,598 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 01:05:15] 2026-01-09 06:04:43,599 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 01:05:15] 2026-01-09 06:04:43,599 | INFO     | job 6963152591 has completed (purged errors)
[2026-01-09 01:05:15] 2026-01-09 06:04:43,599 | INFO     | overall cleanup function is called
[2026-01-09 01:05:15] 2026-01-09 06:04:44,607 | INFO     | --- collectZombieJob: --- 10, [865]
[2026-01-09 01:05:15] 2026-01-09 06:04:44,607 | INFO     | zombie collector waiting for pid 865
[2026-01-09 01:05:15] 2026-01-09 06:04:44,607 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 01:05:15] 2026-01-09 06:04:44,608 | INFO     | collected zombie processes
[2026-01-09 01:05:15] 2026-01-09 06:04:44,608 | INFO     | will attempt to kill all subprocesses of pid=865
[2026-01-09 01:05:15] 2026-01-09 06:04:44,693 | INFO     | process IDs to be killed: [865] (in reverse order)
[2026-01-09 01:05:15] 2026-01-09 06:04:44,749 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 01:05:15] 2026-01-09 06:04:44,750 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 01:05:15] 2026-01-09 06:04:44,756 | INFO     | did not find any defunct processes belonging to 865
[2026-01-09 01:05:15] 2026-01-09 06:04:44,760 | INFO     | did not find any defunct processes belonging to 865
[2026-01-09 01:05:15] 2026-01-09 06:04:44,760 | INFO     | ready for new job
[2026-01-09 01:05:15] 2026-01-09 06:04:44,760 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 01:05:15] 2026-01-09 06:04:44,762 | INFO     | ***************************************
[2026-01-09 01:05:15] 2026-01-09 06:04:44,762 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 01:05:15] 2026-01-09 06:04:44,762 | INFO     | ***************************************
[2026-01-09 01:05:15] 2026-01-09 06:04:44,763 | INFO     | 
[2026-01-09 01:05:15] 2026-01-09 06:04:44,763 | INFO     | architecture information:
[2026-01-09 01:05:15] 2026-01-09 06:04:44,764 | INFO     | executing command: cat /etc/os-release
[2026-01-09 01:05:15] 2026-01-09 06:04:44,782 | INFO     | cat /etc/os-release:
[2026-01-09 01:05:15] NAME="CentOS Linux"
[2026-01-09 01:05:15] VERSION="7 (Core)"
[2026-01-09 01:05:15] ID="centos"
[2026-01-09 01:05:15] ID_LIKE="rhel fedora"
[2026-01-09 01:05:15] VERSION_ID="7"
[2026-01-09 01:05:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 01:05:15] ANSI_COLOR="0;31"
[2026-01-09 01:05:15] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 01:05:15] HOME_URL="https://www.centos.org/"
[2026-01-09 01:05:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 01:05:15] 
[2026-01-09 01:05:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 01:05:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 01:05:15] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 01:05:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 01:05:15] 
[2026-01-09 01:05:15] 2026-01-09 06:04:44,783 | INFO     | ***************************************
[2026-01-09 01:05:15] 2026-01-09 06:04:45,286 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-09 01:05:15] 2026-01-09 06:04:45,306 | INFO     | sufficient remaining disk space (18540920832 B)
[2026-01-09 01:05:15] 2026-01-09 06:04:45,306 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 01:05:15] 2026-01-09 06:04:45,307 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 01:05:15] 2026-01-09 06:04:45,307 | INFO     | update_server=False
[2026-01-09 01:05:15] 2026-01-09 06:04:45,307 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 01:05:15] 2026-01-09 06:04:45,308 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 01:05:15] 2026-01-09 06:04:45,379 | INFO     | all data control threads have been joined
[2026-01-09 01:05:15] 2026-01-09 06:04:45,845 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 01:05:15] 2026-01-09 06:04:45,845 | INFO     | aborting loop
[2026-01-09 01:05:15] 2026-01-09 06:04:46,313 | INFO     | [job] retrieve thread has finished
[2026-01-09 01:05:15] 2026-01-09 06:04:46,313 | INFO     | [job] queue monitor thread has finished
[2026-01-09 01:05:15] 2026-01-09 06:04:46,362 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 01:05:15] 2026-01-09 06:04:46,382 | INFO     | [data] control thread has finished
[2026-01-09 01:05:15] 2026-01-09 06:04:46,428 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 01:05:15] 2026-01-09 06:04:46,446 | INFO     | all job control threads have been joined
[2026-01-09 01:05:15] 2026-01-09 06:04:46,450 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 01:05:15] 2026-01-09 06:04:46,479 | INFO     | [payload] failed_post thread has finished
[2026-01-09 01:05:15] 2026-01-09 06:04:46,664 | INFO     | all payload control threads have been joined
[2026-01-09 01:05:15] 2026-01-09 06:04:46,848 | INFO     | [job] job monitor thread has finished
[2026-01-09 01:05:15] 2026-01-09 06:04:47,113 | INFO     | [payload] validate_post thread has finished
[2026-01-09 01:05:15] 2026-01-09 06:04:47,332 | INFO     | [job] validate thread has finished
[2026-01-09 01:05:15] 2026-01-09 06:04:47,446 | INFO     | [job] control thread has finished
[2026-01-09 01:05:15] 2026-01-09 06:04:47,451 | INFO     | [monitor] cgroup control has ended
[2026-01-09 01:05:15] 2026-01-09 06:04:47,484 | INFO     | [data] copytool_in thread has finished
[2026-01-09 01:05:15] 2026-01-09 06:04:47,619 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 01:05:15] 2026-01-09 06:04:47,626 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 01:05:15] 2026-01-09 06:04:47,669 | INFO     | [payload] control thread has finished
[2026-01-09 01:05:15] 2026-01-09 06:04:48,124 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 01:05:15] 2026-01-09 06:04:48,365 | INFO     | [data] copytool_out thread has finished
[2026-01-09 01:05:15] 2026-01-09 06:04:52,130 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 01:05:15] 2026-01-09 06:04:52,836 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140631659435840)>', '<ExcThread(monitor, started 140630667794176)>']
[2026-01-09 01:05:15] 2026-01-09 06:04:57,859 | INFO     | all workflow threads have been joined
[2026-01-09 01:05:15] 2026-01-09 06:04:57,863 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 01:05:15] 2026-01-09 06:04:57,864 | INFO     | traces error code: 0
[2026-01-09 01:05:15] 2026-01-09 06:04:57,864 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 01:05:15] 2026-01-09 06:05:15,434 | INFO     | PID=26881 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-09 01:05:15] 2026-01-09 06:05:15,434 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 01:05:15] 2026-01-09 06:05:15,434 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 01:05:15] 2026-01-09 06:05:15,434 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 01:05:15] 2026-01-09 06:05:15,435 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 01:05:15] 2026-01-09 06:05:15,435 | INFO     | [monitor] control thread has ended
[2026-01-09 01:05:15] 2026-01-09 06:05:15,532 [wrapper] ==== pilot stdout END ====
[2026-01-09 01:05:15] 2026-01-09 06:05:15,536 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 01:05:15] 2026-01-09 06:05:15,540 [wrapper] pilotpid: 26881
[2026-01-09 01:05:15] 2026-01-09 06:05:15,545 [wrapper] Pilot exit status: 0
[2026-01-09 01:05:15] 2026-01-09 06:05:15,561 [wrapper] pandaids: 6963152591
[2026-01-09 01:05:15] 2026-01-09 06:05:15,607 [wrapper] cleanup supervisor_pilot  1731 26882
[2026-01-09 01:05:15] 2026-01-09 06:05:15,612 [wrapper] Test setup, not cleaning
[2026-01-09 01:05:15] 2026-01-09 06:05:15,617 [wrapper] apfmon messages muted
[2026-01-09 01:05:15] 2026-01-09 06:05:15,622 [wrapper] ==== wrapper stdout END ====
[2026-01-09 01:05:15] 2026-01-09 06:05:15,626 [wrapper] ==== wrapper stderr END ====
[2026-01-09 01:05:15]  *** Error codes and diagnostics ***
[2026-01-09 01:05:15]     "exeErrorCode": 0,
[2026-01-09 01:05:15]     "exeErrorDiag": "",
[2026-01-09 01:05:15]     "pilotErrorCode": 0,
[2026-01-09 01:05:15]     "pilotErrorDiag": "",
[2026-01-09 01:05:15]  *** Listing of results directory ***
[2026-01-09 01:05:15] total 435196
[2026-01-09 01:05:15] -rw-r--r-- 1 boincer umatlas    579449 Jan  8 11:02 pilot3.tar.gz
[2026-01-09 01:05:15] -rwx------ 1 boincer umatlas     36322 Jan  8 11:04 runpilot2-wrapper.sh
[2026-01-09 01:05:15] -rw-r--r-- 1 boincer umatlas      5112 Jan  8 11:04 queuedata.json
[2026-01-09 01:05:15] -rw-r--r-- 1 boincer umatlas       100 Jan  8 22:27 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 01:05:15] -rwxr-xr-x 1 boincer umatlas      7986 Jan  8 22:27 run_atlas
[2026-01-09 01:05:15] -rw-r--r-- 1 boincer umatlas       105 Jan  8 22:27 job.xml
[2026-01-09 01:05:15] -rw-r--r-- 2 boincer umatlas 223049276 Jan  8 22:27 EVNT.47898824._000875.pool.root.1
[2026-01-09 01:05:15] -rw-r--r-- 2 boincer umatlas     15847 Jan  8 22:27 start_atlas.sh
[2026-01-09 01:05:15] drwxrwx--x 2 boincer umatlas      4096 Jan  8 22:27 shared
[2026-01-09 01:05:15] -rw-r--r-- 2 boincer umatlas    592394 Jan  8 22:27 input.tar.gz
[2026-01-09 01:05:15] -rw-r--r-- 1 boincer umatlas         0 Jan  8 22:27 boinc_lockfile
[2026-01-09 01:05:15] -rw-r--r-- 1 boincer umatlas      2517 Jan  8 22:27 pandaJob.out
[2026-01-09 01:05:15] -rw------- 1 boincer umatlas        57 Jan  8 22:27 setup.sh.local
[2026-01-09 01:05:15] -rw------- 1 boincer umatlas    989771 Jan  8 22:27 agis_schedconf.cvmfs.json
[2026-01-09 01:05:15] -rw------- 1 boincer umatlas   1516240 Jan  8 22:27 agis_ddmendpoints.agis.ALL.json
[2026-01-09 01:05:15] drwx------ 5 boincer umatlas      4096 Jan  8 22:27 pilot3
[2026-01-09 01:05:15] -rw-r--r-- 1 boincer umatlas      5908 Jan  9 01:01 init_data.xml
[2026-01-09 01:05:15] -rw------- 1 boincer umatlas 215285533 Jan  9 01:04 HITS.47898826._029349.pool.root.1
[2026-01-09 01:05:15] -rw-r--r-- 1 boincer umatlas       529 Jan  9 01:04 boinc_task_state.xml
[2026-01-09 01:05:15] -rw------- 1 boincer umatlas      1047 Jan  9 01:04 memory_monitor_summary.json
[2026-01-09 01:05:15] -rw------- 1 boincer umatlas    382017 Jan  9 01:04 log.47898826._029349.job.log.tgz.1
[2026-01-09 01:05:15] -rw------- 1 boincer umatlas        95 Jan  9 01:04 pilot_heartbeat.json
[2026-01-09 01:05:15] -rw------- 1 boincer umatlas      7841 Jan  9 01:04 heartbeat.json
[2026-01-09 01:05:15] -rw-r--r-- 1 boincer umatlas        27 Jan  9 01:05 wrapper_checkpoint.txt
[2026-01-09 01:05:15] -rw-r--r-- 1 boincer umatlas      8192 Jan  9 01:05 boinc_mmap_file
[2026-01-09 01:05:15] -rw------- 1 boincer umatlas       745 Jan  9 01:05 pilotlog.txt
[2026-01-09 01:05:15] -rw------- 1 boincer umatlas   1315372 Jan  9 01:05 log.47898826._029349.job.log.1
[2026-01-09 01:05:15] -rw------- 1 boincer umatlas       357 Jan  9 01:05 output.list
[2026-01-09 01:05:15] -rw-r--r-- 1 boincer umatlas       620 Jan  9 01:05 runtime_log
[2026-01-09 01:05:15] -rw------- 1 boincer umatlas   1720320 Jan  9 01:05 result.tar.gz
[2026-01-09 01:05:15] -rw-r--r-- 1 boincer umatlas      9337 Jan  9 01:05 runtime_log.err
[2026-01-09 01:05:15] -rw------- 1 boincer umatlas       659 Jan  9 01:05 HGpLDmsf7x8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmFlfKDmoDSIHn.diag
[2026-01-09 01:05:15] -rw-r--r-- 1 boincer umatlas     21318 Jan  9 01:05 stderr.txt
[2026-01-09 01:05:15] HITS file was successfully produced:
[2026-01-09 01:05:15] -rw------- 1 boincer umatlas 215285533 Jan  9 01:04 shared/HITS.pool.root.1
[2026-01-09 01:05:15]  *** Contents of shared directory: ***
[2026-01-09 01:05:15] total 430340
[2026-01-09 01:05:15] -rw-r--r-- 2 boincer umatlas 223049276 Jan  8 22:27 ATLAS.root_0
[2026-01-09 01:05:15] -rw-r--r-- 2 boincer umatlas     15847 Jan  8 22:27 start_atlas.sh
[2026-01-09 01:05:15] -rw-r--r-- 2 boincer umatlas    592394 Jan  8 22:27 input.tar.gz
[2026-01-09 01:05:15] -rw------- 1 boincer umatlas 215285533 Jan  9 01:04 HITS.pool.root.1
[2026-01-09 01:05:15] -rw------- 1 boincer umatlas   1720320 Jan  9 01:05 result.tar.gz
01:05:17 (23202): run_atlas exited; CPU time 70050.012180
01:05:17 (23202): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN