Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:54:55 (8283): wrapper (7.7.26015): starting
08:54:55 (8283): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 08:54:55] Arguments: --nthreads 8
[2026-01-09 08:54:55] Threads: 8
[2026-01-09 08:54:55] Checking for CVMFS
[2026-01-09 08:54:56] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 08:54:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 08:54:56] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 08:54:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 08:54:56] 2.11.2.0 12981 35140 101012 154936 1 57 15332801 25165825 0 130560 0 15356406 99.810 10962339 3908 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-09 08:54:56] CVMFS is ok
[2026-01-09 08:54:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 08:54:56] Checking for apptainer binary...
[2026-01-09 08:54:56] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 08:54:56] Running /usr/bin/apptainer --version
[2026-01-09 08:54:56] apptainer version 1.3.2-1.el7
[2026-01-09 08:54:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 08:54:57] cg-vwn366.simple-grid.lan
[2026-01-09 08:54:57] apptainer works
[2026-01-09 08:54:57] Set ATHENA_PROC_NUMBER=8
[2026-01-09 08:54:57] Set ATHENA_CORE_NUMBER=8
[2026-01-09 08:54:57] Starting ATLAS job with PandaID=6963157104
[2026-01-09 08:54:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 11:44:50]  *** The last 200 lines of the pilot log: ***
[2026-01-09 11:44:50] 2026-01-09 10:44:12,378 | INFO     | total number of processed events: 400 (read)
[2026-01-09 11:44:50] 2026-01-09 10:44:12,379 | INFO     | executing command: lscpu
[2026-01-09 11:44:50] 2026-01-09 10:44:12,402 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-09 11:44:50] 2026-01-09 10:44:12,721 | INFO     | time since job start (10141s) is within the limit (349056.0s)
[2026-01-09 11:44:50] 2026-01-09 10:44:14,623 | INFO     | monitor loop #691: job 0:6963157104 is in state 'finished'
[2026-01-09 11:44:50] 2026-01-09 10:44:14,623 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 11:44:50] 2026-01-09 10:44:14,728 | INFO     | time since job start (10143s) is within the limit (349056.0s)
[2026-01-09 11:44:50] 2026-01-09 10:44:16,733 | INFO     | time since job start (10145s) is within the limit (349056.0s)
[2026-01-09 11:44:50] 2026-01-09 10:44:17,032 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 11:44:50] 2026-01-09 10:44:17,033 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2026-01-09 11:44:50] 2026-01-09 10:44:17,035 | INFO     | using path: /var/lib/boinc/slots/6/PanDA_Pilot-6963157104/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 11:44:50] 2026-01-09 10:44:17,036 | INFO     | extracted standard info from prmon json
[2026-01-09 11:44:50] 2026-01-09 10:44:17,037 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 11:44:50] 2026-01-09 10:44:17,037 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 11:44:50] 2026-01-09 10:44:17,037 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 11:44:50] 2026-01-09 10:44:17,037 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 11:44:50] 2026-01-09 10:44:17,041 | INFO     | fitting pss+swap vs Time
[2026-01-09 11:44:50] 2026-01-09 10:44:17,042 | INFO     | sum of square deviations: 1418361477.5
[2026-01-09 11:44:50] 2026-01-09 10:44:17,043 | INFO     | sum of deviations: 16001494654.49999
[2026-01-09 11:44:50] 2026-01-09 10:44:17,043 | INFO     | mean x: 1767950373.5
[2026-01-09 11:44:50] 2026-01-09 10:44:17,044 | INFO     | mean y: 2495051.379518072
[2026-01-09 11:44:50] 2026-01-09 10:44:17,044 | INFO     | intersect: -19942948264.55509
[2026-01-09 11:44:50] 2026-01-09 10:44:17,044 | INFO     | chi2: 1.5541151385366911
[2026-01-09 11:44:50] 2026-01-09 10:44:17,044 | INFO     | sum of square deviations: 1294014960.0
[2026-01-09 11:44:50] 2026-01-09 10:44:17,046 | INFO     | sum of deviations: 15459486993.000006
[2026-01-09 11:44:50] 2026-01-09 10:44:17,046 | INFO     | mean x: 1767950221.0
[2026-01-09 11:44:50] 2026-01-09 10:44:17,046 | INFO     | mean y: 2494386.48447205
[2026-01-09 11:44:50] 2026-01-09 10:44:17,046 | INFO     | intersect: -21119056979.36758
[2026-01-09 11:44:50] 2026-01-09 10:44:17,046 | INFO     | chi2: 1.5556605488145094
[2026-01-09 11:44:50] 2026-01-09 10:44:17,047 | INFO     | current chi2=1.5556605488145094 (change=-0.09943988315263474 %)
[2026-01-09 11:44:50] 2026-01-09 10:44:17,047 | INFO     | right removable region: 160
[2026-01-09 11:44:50] 2026-01-09 10:44:17,047 | INFO     | sum of square deviations: 1294014960.0
[2026-01-09 11:44:50] 2026-01-09 10:44:17,048 | INFO     | sum of deviations: -8779309832.000002
[2026-01-09 11:44:50] 2026-01-09 10:44:17,049 | INFO     | mean x: 1767950526.0
[2026-01-09 11:44:50] 2026-01-09 10:44:17,049 | INFO     | mean y: 2525011.7080745343
[2026-01-09 11:44:50] 2026-01-09 10:44:17,049 | INFO     | intersect: 11997274620.631742
[2026-01-09 11:44:50] 2026-01-09 10:44:17,049 | INFO     | chi2: 0.10443379604540703
[2026-01-09 11:44:50] 2026-01-09 10:44:17,049 | INFO     | current chi2=0.10443379604540703 (change=93.2801763874626 %)
[2026-01-09 11:44:50] 2026-01-09 10:44:17,050 | INFO     | sum of square deviations: 1177156955.0
[2026-01-09 11:44:50] 2026-01-09 10:44:17,051 | INFO     | sum of deviations: -8651823034.50001
[2026-01-09 11:44:50] 2026-01-09 10:44:17,051 | INFO     | mean x: 1767950678.5
[2026-01-09 11:44:50] 2026-01-09 10:44:17,051 | INFO     | mean y: 2524775.314102564
[2026-01-09 11:44:50] 2026-01-09 10:44:17,051 | INFO     | intersect: 12996540857.142563
[2026-01-09 11:44:50] 2026-01-09 10:44:17,052 | INFO     | chi2: 0.08827006706201071
[2026-01-09 11:44:50] 2026-01-09 10:44:17,052 | INFO     | current chi2=0.08827006706201071 (change=15.477488701424255 %)
[2026-01-09 11:44:50] 2026-01-09 10:44:17,052 | INFO     | left removable region: 20
[2026-01-09 11:44:50] 2026-01-09 10:44:17,052 | INFO     | sum of square deviations: 850825255.0
[2026-01-09 11:44:50] 2026-01-09 10:44:17,053 | INFO     | sum of deviations: 1936017572.9999998
[2026-01-09 11:44:50] 2026-01-09 10:44:17,053 | INFO     | mean x: 1767950800.5
[2026-01-09 11:44:50] 2026-01-09 10:44:17,053 | INFO     | mean y: 2508909.285714286
[2026-01-09 11:44:50] 2026-01-09 10:44:17,054 | INFO     | intersect: -4020389797.414543
[2026-01-09 11:44:50] 2026-01-09 10:44:17,054 | INFO     | chi2: 0.012984375830250573
[2026-01-09 11:44:50] 2026-01-09 10:44:17,054 | INFO     | current memory leak: 2.28 B/s (using 140 data points, chi2=0.01)
[2026-01-09 11:44:50] 2026-01-09 10:44:17,055 | INFO     | could have reported an average CPU frequency of 1999 MHz (9 samples)
[2026-01-09 11:44:50] 2026-01-09 10:44:17,055 | INFO     | ..............................
[2026-01-09 11:44:50] 2026-01-09 10:44:17,055 | INFO     | . Timing measurements:
[2026-01-09 11:44:50] 2026-01-09 10:44:17,055 | INFO     | . get job = 0 s
[2026-01-09 11:44:50] 2026-01-09 10:44:17,055 | INFO     | . initial setup = 2 s
[2026-01-09 11:44:50] 2026-01-09 10:44:17,055 | INFO     | . payload setup = 6 s
[2026-01-09 11:44:50] 2026-01-09 10:44:17,056 | INFO     | . stage-in = 0 s
[2026-01-09 11:44:50] 2026-01-09 10:44:17,056 | INFO     | . payload execution = 10113 s
[2026-01-09 11:44:50] 2026-01-09 10:44:17,056 | INFO     | . stage-out = 0 s
[2026-01-09 11:44:50] 2026-01-09 10:44:17,056 | INFO     | . log creation = 0 s
[2026-01-09 11:44:50] 2026-01-09 10:44:17,056 | INFO     | ..............................
[2026-01-09 11:44:50] 2026-01-09 10:44:17,172 | INFO     | 
[2026-01-09 11:44:50] 2026-01-09 10:44:17,172 | INFO     | job summary report
[2026-01-09 11:44:50] 2026-01-09 10:44:17,172 | INFO     | --------------------------------------------------
[2026-01-09 11:44:50] 2026-01-09 10:44:17,173 | INFO     | PanDA job id: 6963157104
[2026-01-09 11:44:50] 2026-01-09 10:44:17,173 | INFO     | task id: 47898826
[2026-01-09 11:44:50] 2026-01-09 10:44:17,173 | INFO     | errors: (none)
[2026-01-09 11:44:50] 2026-01-09 10:44:17,173 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 11:44:50] 2026-01-09 10:44:17,173 | INFO     | pilot state: finished 
[2026-01-09 11:44:50] 2026-01-09 10:44:17,173 | INFO     | transexitcode: 0
[2026-01-09 11:44:50] 2026-01-09 10:44:17,173 | INFO     | exeerrorcode: 0
[2026-01-09 11:44:50] 2026-01-09 10:44:17,173 | INFO     | exeerrordiag: 
[2026-01-09 11:44:50] 2026-01-09 10:44:17,173 | INFO     | exitcode: 0
[2026-01-09 11:44:50] 2026-01-09 10:44:17,174 | INFO     | exitmsg: OK
[2026-01-09 11:44:50] 2026-01-09 10:44:17,174 | INFO     | cpuconsumptiontime: 76558 s
[2026-01-09 11:44:50] 2026-01-09 10:44:17,174 | INFO     | nevents: 400
[2026-01-09 11:44:50] 2026-01-09 10:44:17,174 | INFO     | neventsw: 0
[2026-01-09 11:44:50] 2026-01-09 10:44:17,174 | INFO     | pid: 18492
[2026-01-09 11:44:50] 2026-01-09 10:44:17,174 | INFO     | pgrp: 18492
[2026-01-09 11:44:50] 2026-01-09 10:44:17,174 | INFO     | corecount: 8
[2026-01-09 11:44:50] 2026-01-09 10:44:17,174 | INFO     | event service: False
[2026-01-09 11:44:50] 2026-01-09 10:44:17,174 | INFO     | sizes: {0: 2283971, 1: 2283999, 5: 2284261, 11: 2284317, 10123: 2312716, 10125: 2321898, 10130: 2322100}
[2026-01-09 11:44:50] 2026-01-09 10:44:17,175 | INFO     | --------------------------------------------------
[2026-01-09 11:44:50] 2026-01-09 10:44:17,175 | INFO     | 
[2026-01-09 11:44:50] 2026-01-09 10:44:17,175 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2026-01-09 11:44:50] 2026-01-09 10:44:17,198 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 11:44:50] 2026-01-09 10:44:17,198 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 11:44:50] 2026-01-09 10:44:17,198 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 11:44:50] 2026-01-09 10:44:17,198 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 11:44:50] 2026-01-09 10:44:17,198 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 11:44:50] 2026-01-09 10:44:17,198 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 11:44:50] 2026-01-09 10:44:17,199 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 11:44:50] 2026-01-09 10:44:17,199 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 11:44:50] 2026-01-09 10:44:17,199 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 11:44:50] 2026-01-09 10:44:17,199 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 11:44:50] 2026-01-09 10:44:17,199 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 11:44:50] 2026-01-09 10:44:17,199 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 11:44:50] 2026-01-09 10:44:17,199 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 11:44:50] 2026-01-09 10:44:17,199 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 11:44:50] 2026-01-09 10:44:17,199 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 11:44:50] 2026-01-09 10:44:17,200 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 11:44:50] 2026-01-09 10:44:17,200 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 11:44:50] 2026-01-09 10:44:17,200 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 11:44:50] 2026-01-09 10:44:17,200 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 11:44:50] 2026-01-09 10:44:17,200 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 11:44:50] 2026-01-09 10:44:17,200 | INFO     | job 6963157104 has completed (purged errors)
[2026-01-09 11:44:50] 2026-01-09 10:44:17,200 | INFO     | overall cleanup function is called
[2026-01-09 11:44:50] 2026-01-09 10:44:18,209 | INFO     | --- collectZombieJob: --- 10, [18492]
[2026-01-09 11:44:50] 2026-01-09 10:44:18,209 | INFO     | zombie collector waiting for pid 18492
[2026-01-09 11:44:50] 2026-01-09 10:44:18,209 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 11:44:50] 2026-01-09 10:44:18,209 | INFO     | collected zombie processes
[2026-01-09 11:44:50] 2026-01-09 10:44:18,210 | INFO     | will attempt to kill all subprocesses of pid=18492
[2026-01-09 11:44:50] 2026-01-09 10:44:18,273 | INFO     | process IDs to be killed: [18492] (in reverse order)
[2026-01-09 11:44:50] 2026-01-09 10:44:18,330 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 11:44:50] 2026-01-09 10:44:18,330 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 11:44:50] 2026-01-09 10:44:18,332 | INFO     | did not find any defunct processes belonging to 18492
[2026-01-09 11:44:50] 2026-01-09 10:44:18,334 | INFO     | did not find any defunct processes belonging to 18492
[2026-01-09 11:44:50] 2026-01-09 10:44:18,334 | INFO     | ready for new job
[2026-01-09 11:44:50] 2026-01-09 10:44:18,334 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 11:44:50] 2026-01-09 10:44:18,336 | INFO     | ***************************************
[2026-01-09 11:44:50] 2026-01-09 10:44:18,336 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 11:44:50] 2026-01-09 10:44:18,337 | INFO     | ***************************************
[2026-01-09 11:44:50] 2026-01-09 10:44:18,337 | INFO     | 
[2026-01-09 11:44:50] 2026-01-09 10:44:18,337 | INFO     | pilot is running in a VM
[2026-01-09 11:44:50] 2026-01-09 10:44:18,337 | INFO     | architecture information:
[2026-01-09 11:44:50] 2026-01-09 10:44:18,338 | INFO     | executing command: cat /etc/os-release
[2026-01-09 11:44:50] 2026-01-09 10:44:18,363 | INFO     | cat /etc/os-release:
[2026-01-09 11:44:50] NAME="CentOS Linux"
[2026-01-09 11:44:50] VERSION="7 (Core)"
[2026-01-09 11:44:50] ID="centos"
[2026-01-09 11:44:50] ID_LIKE="rhel fedora"
[2026-01-09 11:44:50] VERSION_ID="7"
[2026-01-09 11:44:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 11:44:50] ANSI_COLOR="0;31"
[2026-01-09 11:44:50] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 11:44:50] HOME_URL="https://www.centos.org/"
[2026-01-09 11:44:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 11:44:50] 
[2026-01-09 11:44:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 11:44:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 11:44:50] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 11:44:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 11:44:50] 
[2026-01-09 11:44:50] 2026-01-09 10:44:18,363 | INFO     | ***************************************
[2026-01-09 11:44:50] 2026-01-09 10:44:18,867 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2026-01-09 11:44:50] 2026-01-09 10:44:18,894 | INFO     | sufficient remaining disk space (498120785920 B)
[2026-01-09 11:44:50] 2026-01-09 10:44:18,895 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 11:44:50] 2026-01-09 10:44:18,895 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 11:44:50] 2026-01-09 10:44:18,895 | INFO     | update_server=False
[2026-01-09 11:44:50] 2026-01-09 10:44:18,895 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 11:44:50] 2026-01-09 10:44:18,895 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 11:44:50] 2026-01-09 10:44:18,896 | INFO     | aborting loop
[2026-01-09 11:44:50] 2026-01-09 10:44:18,896 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 11:44:50] 2026-01-09 10:44:18,896 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 11:44:50] 2026-01-09 10:44:18,958 | INFO     | all payload control threads have been joined
[2026-01-09 11:44:50] 2026-01-09 10:44:19,901 | INFO     | [job] retrieve thread has finished
[2026-01-09 11:44:50] 2026-01-09 10:44:19,901 | INFO     | [job] job monitor thread has finished
[2026-01-09 11:44:50] 2026-01-09 10:44:19,902 | INFO     | [job] queue monitor thread has finished
[2026-01-09 11:44:50] 2026-01-09 10:44:19,942 | INFO     | all data control threads have been joined
[2026-01-09 11:44:50] 2026-01-09 10:44:19,964 | INFO     | [payload] control thread has finished
[2026-01-09 11:44:50] 2026-01-09 10:44:19,971 | INFO     | [payload] failed_post thread has finished
[2026-01-09 11:44:50] 2026-01-09 10:44:20,031 | INFO     | [data] copytool_in thread has finished
[2026-01-09 11:44:50] 2026-01-09 10:44:20,109 | INFO     | [payload] validate_post thread has finished
[2026-01-09 11:44:50] 2026-01-09 10:44:20,119 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 11:44:50] 2026-01-09 10:44:20,197 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 11:44:50] 2026-01-09 10:44:20,471 | INFO     | all job control threads have been joined
[2026-01-09 11:44:50] 2026-01-09 10:44:20,948 | INFO     | [data] control thread has finished
[2026-01-09 11:44:50] 2026-01-09 10:44:20,997 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 11:44:50] 2026-01-09 10:44:21,008 | INFO     | [job] validate thread has finished
[2026-01-09 11:44:50] 2026-01-09 10:44:21,337 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 11:44:50] 2026-01-09 10:44:21,477 | INFO     | [job] control thread has finished
[2026-01-09 11:44:50] 2026-01-09 10:44:22,203 | INFO     | [data] copytool_out thread has finished
[2026-01-09 11:44:50] 2026-01-09 10:44:22,902 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 11:44:50] 2026-01-09 10:44:27,579 | INFO     | [monitor] cgroup control has ended
[2026-01-09 11:44:50] 2026-01-09 10:44:29,549 | INFO     | job.realtimelogging is not enabled
[2026-01-09 11:44:50] 2026-01-09 10:44:30,555 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 11:44:50] 2026-01-09 10:44:32,593 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140418052138816)>', '<ExcThread(monitor, started 140417613936384)>']
[2026-01-09 11:44:50] 2026-01-09 10:44:37,619 | INFO     | all workflow threads have been joined
[2026-01-09 11:44:50] 2026-01-09 10:44:37,619 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 11:44:50] 2026-01-09 10:44:37,620 | INFO     | traces error code: 0
[2026-01-09 11:44:50] 2026-01-09 10:44:37,620 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 11:44:50] 2026-01-09 10:44:49,836 | INFO     | PID=12027 has CPU usage=4.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-09 11:44:50] 2026-01-09 10:44:49,837 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 11:44:50] 2026-01-09 10:44:49,837 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 11:44:50] 2026-01-09 10:44:49,837 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 11:44:50] 2026-01-09 10:44:49,837 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 11:44:50] 2026-01-09 10:44:49,837 | INFO     | [monitor] control thread has ended
[2026-01-09 11:44:50] 2026-01-09 10:44:49,982 [wrapper] ==== pilot stdout END ====
[2026-01-09 11:44:50] 2026-01-09 10:44:49,986 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 11:44:50] 2026-01-09 10:44:49,990 [wrapper] pilotpid: 12027
[2026-01-09 11:44:50] 2026-01-09 10:44:49,994 [wrapper] Pilot exit status: 0
[2026-01-09 11:44:50] 2026-01-09 10:44:50,009 [wrapper] pandaids: 6963157104
[2026-01-09 11:44:50] 2026-01-09 10:44:50,039 [wrapper] cleanup supervisor_pilot  3456 12028
[2026-01-09 11:44:50] 2026-01-09 10:44:50,043 [wrapper] Test setup, not cleaning
[2026-01-09 11:44:50] 2026-01-09 10:44:50,048 [wrapper] apfmon messages muted
[2026-01-09 11:44:50] 2026-01-09 10:44:50,052 [wrapper] ==== wrapper stdout END ====
[2026-01-09 11:44:50] 2026-01-09 10:44:50,055 [wrapper] ==== wrapper stderr END ====
[2026-01-09 11:44:50]  *** Error codes and diagnostics ***
[2026-01-09 11:44:50]     "exeErrorCode": 0,
[2026-01-09 11:44:50]     "exeErrorDiag": "",
[2026-01-09 11:44:50]     "pilotErrorCode": 0,
[2026-01-09 11:44:50]     "pilotErrorDiag": "",
[2026-01-09 11:44:50]  *** Listing of results directory ***
[2026-01-09 11:44:50] total 443072
[2026-01-09 11:44:50] -rw-r--r--. 1 boinc boinc    579449 Jan  8 22:44 pilot3.tar.gz
[2026-01-09 11:44:50] -rw-r--r--. 1 boinc boinc      5112 Jan  8 22:45 queuedata.json
[2026-01-09 11:44:50] -rwx------. 1 boinc boinc     36322 Jan  8 22:46 runpilot2-wrapper.sh
[2026-01-09 11:44:50] -rw-r--r--. 1 boinc boinc       100 Jan  9 08:54 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 11:44:50] -rwxr-xr-x. 1 boinc boinc      7986 Jan  9 08:54 run_atlas
[2026-01-09 11:44:50] -rw-r--r--. 1 boinc boinc       105 Jan  9 08:54 job.xml
[2026-01-09 11:44:50] -rw-r--r--. 2 boinc boinc 228564599 Jan  9 08:54 EVNT.47898824._001245.pool.root.1
[2026-01-09 11:44:50] drwxrwx--x. 2 boinc boinc        68 Jan  9 08:54 shared
[2026-01-09 11:44:50] -rw-r--r--. 2 boinc boinc    592401 Jan  9 08:54 input.tar.gz
[2026-01-09 11:44:50] -rw-r--r--. 1 boinc boinc      6389 Jan  9 08:54 init_data.xml
[2026-01-09 11:44:50] -rw-r--r--. 2 boinc boinc     15847 Jan  9 08:54 start_atlas.sh
[2026-01-09 11:44:50] -rw-r--r--. 1 boinc boinc         0 Jan  9 08:54 boinc_lockfile
[2026-01-09 11:44:50] -rw-r--r--. 1 boinc boinc      2520 Jan  9 08:54 pandaJob.out
[2026-01-09 11:44:50] -rw-------. 1 boinc boinc    989771 Jan  9 08:55 agis_schedconf.cvmfs.json
[2026-01-09 11:44:50] -rw-------. 1 boinc boinc   1516240 Jan  9 08:55 agis_ddmendpoints.agis.ALL.json
[2026-01-09 11:44:50] drwx------. 5 boinc boinc      4096 Jan  9 08:55 pilot3
[2026-01-09 11:44:50] -rw-r--r--. 1 boinc boinc       531 Jan  9 11:43 boinc_task_state.xml
[2026-01-09 11:44:50] -rw-------. 1 boinc boinc 217735996 Jan  9 11:43 HITS.47898826._032233.pool.root.1
[2026-01-09 11:44:50] -rw-------. 1 boinc boinc      1014 Jan  9 11:44 memory_monitor_summary.json
[2026-01-09 11:44:50] -rw-------. 1 boinc boinc    393468 Jan  9 11:44 log.47898826._032233.job.log.tgz.1
[2026-01-09 11:44:50] -rw-------. 1 boinc boinc      7770 Jan  9 11:44 heartbeat.json
[2026-01-09 11:44:50] -rw-r--r--. 1 boinc boinc      8192 Jan  9 11:44 boinc_mmap_file
[2026-01-09 11:44:50] -rw-r--r--. 1 boinc boinc        28 Jan  9 11:44 wrapper_checkpoint.txt
[2026-01-09 11:44:50] -rw-------. 1 boinc boinc       745 Jan  9 11:44 pilotlog.txt
[2026-01-09 11:44:50] -rw-------. 1 boinc boinc        95 Jan  9 11:44 pilot_heartbeat.json
[2026-01-09 11:44:50] -rw-------. 1 boinc boinc   1360134 Jan  9 11:44 log.47898826._032233.job.log.1
[2026-01-09 11:44:50] -rw-------. 1 boinc boinc       357 Jan  9 11:44 output.list
[2026-01-09 11:44:50] -rw-r--r--. 1 boinc boinc       620 Jan  9 11:44 runtime_log
[2026-01-09 11:44:50] -rw-------. 1 boinc boinc   1771520 Jan  9 11:44 result.tar.gz
[2026-01-09 11:44:50] -rw-------. 1 boinc boinc       655 Jan  9 11:44 tUmNDmc0Cy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmfCgKDmdysI1m.diag
[2026-01-09 11:44:50] -rw-r--r--. 1 boinc boinc      8817 Jan  9 11:44 runtime_log.err
[2026-01-09 11:44:50] -rw-r--r--. 1 boinc boinc     20975 Jan  9 11:44 stderr.txt
[2026-01-09 11:44:50] HITS file was successfully produced:
[2026-01-09 11:44:50] -rw-------. 1 boinc boinc 217735996 Jan  9 11:43 shared/HITS.pool.root.1
[2026-01-09 11:44:50]  *** Contents of shared directory: ***
[2026-01-09 11:44:50] total 438172
[2026-01-09 11:44:50] -rw-r--r--. 2 boinc boinc 228564599 Jan  9 08:54 ATLAS.root_0
[2026-01-09 11:44:50] -rw-r--r--. 2 boinc boinc    592401 Jan  9 08:54 input.tar.gz
[2026-01-09 11:44:50] -rw-r--r--. 2 boinc boinc     15847 Jan  9 08:54 start_atlas.sh
[2026-01-09 11:44:50] -rw-------. 1 boinc boinc 217735996 Jan  9 11:43 HITS.pool.root.1
[2026-01-09 11:44:50] -rw-------. 1 boinc boinc   1771520 Jan  9 11:44 result.tar.gz
11:44:51 (8283): run_atlas exited; CPU time 76627.847293
11:44:51 (8283): called boinc_finish(0)

</stderr_txt>
]]>

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