Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:01:45 (3297055): wrapper (7.7.26015): starting
00:01:45 (3297055): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 00:01:45] Arguments: --nthreads 8
[2026-01-09 00:01:45] Threads: 8
[2026-01-09 00:01:45] Checking for CVMFS
[2026-01-09 00:01:47] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 00:01:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 00:01:47] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 00:01:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 00:01:49] 2.13.3.0 10228 23610 200536 154931 2 272 30790193 32935936 22430 16776704 0 100010673 99.843 56163739 32914 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-09 00:01:49] CVMFS is ok
[2026-01-09 00:01:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 00:01:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 00:01:49] Further information can be found at the LHC@home message board.
[2026-01-09 00:01:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 00:01:49] Checking for apptainer binary...
[2026-01-09 00:01:49] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 00:01:49] Running /usr/bin/apptainer --version
[2026-01-09 00:01:49] apptainer version 1.4.5-2.el9
[2026-01-09 00:01:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 00:01:51] c-8-1.aglt2.org
[2026-01-09 00:01:51] apptainer works
[2026-01-09 00:01:51] Set ATHENA_PROC_NUMBER=8
[2026-01-09 00:01:51] Set ATHENA_CORE_NUMBER=8
[2026-01-09 00:01:51] Starting ATLAS job with PandaID=6963152472
[2026-01-09 00:01:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 21:07:16]  *** The last 200 lines of the pilot log: ***
[2026-01-09 21:07:16] 2026-01-10 02:06:06,018 | INFO     | fitting pss+swap vs Time
[2026-01-09 21:07:16] 2026-01-10 02:06:06,024 | INFO     | sum of square deviations: 586912941150.729
[2026-01-09 21:07:16] 2026-01-10 02:06:06,123 | INFO     | sum of deviations: 1369501518551.8047
[2026-01-09 21:07:16] 2026-01-10 02:06:06,124 | INFO     | mean x: 1767972947.9571545
[2026-01-09 21:07:16] 2026-01-10 02:06:06,124 | INFO     | mean y: 2496259.694421989
[2026-01-09 21:07:16] 2026-01-10 02:06:06,128 | INFO     | intersect: -4122888388.0501556
[2026-01-09 21:07:16] 2026-01-10 02:06:06,135 | INFO     | chi2: 7.6128363772759
[2026-01-09 21:07:16] 2026-01-10 02:06:06,136 | INFO     | sum of square deviations: 579824683685.9702
[2026-01-09 21:07:16] 2026-01-10 02:06:06,237 | INFO     | sum of deviations: 1520240107654.9453
[2026-01-09 21:07:16] 2026-01-10 02:06:06,242 | INFO     | mean x: 1767972795.4594157
[2026-01-09 21:07:16] 2026-01-10 02:06:06,242 | INFO     | mean y: 2499494.4488636362
[2026-01-09 21:07:16] 2026-01-10 02:06:06,242 | INFO     | intersect: -4632941576.831749
[2026-01-09 21:07:16] 2026-01-10 02:06:06,244 | INFO     | chi2: 6.245216957556176
[2026-01-09 21:07:16] 2026-01-10 02:06:06,244 | INFO     | current chi2=6.245216957556176 (change=17.964650124387664 %)
[2026-01-09 21:07:16] 2026-01-10 02:06:06,244 | INFO     | right removable region: 1231
[2026-01-09 21:07:16] 2026-01-10 02:06:06,248 | INFO     | sum of square deviations: 579824262661.9706
[2026-01-09 21:07:16] 2026-01-10 02:06:06,354 | INFO     | time since job start (75758s) is within the limit (349056.0s)
[2026-01-09 21:07:16] 2026-01-10 02:06:06,356 | INFO     | sum of deviations: 976216979904.0072
[2026-01-09 21:07:16] 2026-01-10 02:06:06,356 | INFO     | mean x: 1767973100.4594157
[2026-01-09 21:07:16] 2026-01-10 02:06:06,356 | INFO     | mean y: 2504717.6801948054
[2026-01-09 21:07:16] 2026-01-10 02:06:06,356 | INFO     | intersect: -2974130569.6365156
[2026-01-09 21:07:16] 2026-01-10 02:06:06,358 | INFO     | chi2: 3.9885863809603137
[2026-01-09 21:07:16] 2026-01-10 02:06:06,358 | INFO     | current chi2=3.9885863809603137 (change=47.60709171595845 %)
[2026-01-09 21:07:16] 2026-01-10 02:06:06,364 | INFO     | sum of square deviations: 572793339702.7123
[2026-01-09 21:07:16] 2026-01-10 02:06:06,468 | INFO     | sum of deviations: 717673958708.3745
[2026-01-09 21:07:16] 2026-01-10 02:06:06,468 | INFO     | mean x: 1767973252.9568052
[2026-01-09 21:07:16] 2026-01-10 02:06:06,468 | INFO     | mean y: 2510324.554197229
[2026-01-09 21:07:16] 2026-01-10 02:06:06,468 | INFO     | intersect: -2212648748.3473353
[2026-01-09 21:07:16] 2026-01-10 02:06:06,470 | INFO     | chi2: 2.495033227330207
[2026-01-09 21:07:16] 2026-01-10 02:06:06,470 | INFO     | current chi2=2.495033227330207 (change=37.4456765123515 %)
[2026-01-09 21:07:16] 2026-01-10 02:06:06,476 | INFO     | sum of square deviations: 565819261825.2013
[2026-01-09 21:07:16] 2026-01-10 02:06:06,559 | INFO     | sum of deviations: 546349464615.6767
[2026-01-09 21:07:16] 2026-01-10 02:06:06,559 | INFO     | mean x: 1767973405.4566286
[2026-01-09 21:07:16] 2026-01-10 02:06:06,559 | INFO     | mean y: 2514069.305237316
[2026-01-09 21:07:16] 2026-01-10 02:06:06,560 | INFO     | intersect: -1704623507.4716897
[2026-01-09 21:07:16] 2026-01-10 02:06:06,561 | INFO     | chi2: 1.8379964770810178
[2026-01-09 21:07:16] 2026-01-10 02:06:06,562 | INFO     | current chi2=1.8379964770810178 (change=26.333787584554408 %)
[2026-01-09 21:07:16] 2026-01-10 02:06:06,563 | INFO     | sum of square deviations: 558901649998.1067
[2026-01-09 21:07:16] 2026-01-10 02:06:06,612 | INFO     | sum of deviations: 433192155803.71277
[2026-01-09 21:07:16] 2026-01-10 02:06:06,612 | INFO     | mean x: 1767973557.9605587
[2026-01-09 21:07:16] 2026-01-10 02:06:06,612 | INFO     | mean y: 2516563.306491372
[2026-01-09 21:07:16] 2026-01-10 02:06:06,612 | INFO     | intersect: -1367800158.7491498
[2026-01-09 21:07:16] 2026-01-10 02:06:06,614 | INFO     | chi2: 1.5681539170356502
[2026-01-09 21:07:16] 2026-01-10 02:06:06,614 | INFO     | current chi2=1.5681539170356502 (change=14.681342614644906 %)
[2026-01-09 21:07:16] 2026-01-10 02:06:06,614 | INFO     | left removable region: 40
[2026-01-09 21:07:16] 2026-01-10 02:06:06,616 | INFO     | sum of square deviations: 523839566605.3
[2026-01-09 21:07:16] 2026-01-10 02:06:06,664 | INFO     | sum of deviations: 433151725693.12616
[2026-01-09 21:07:16] 2026-01-10 02:06:06,665 | INFO     | mean x: 1767973984.9622166
[2026-01-09 21:07:16] 2026-01-10 02:06:06,665 | INFO     | mean y: 2523333.2250209907
[2026-01-09 21:07:16] 2026-01-10 02:06:06,665 | INFO     | intersect: -1459376514.336416
[2026-01-09 21:07:16] 2026-01-10 02:06:06,667 | INFO     | chi2: 0.021778038579986014
[2026-01-09 21:07:16] 2026-01-10 02:06:06,667 | INFO     | current memory leak: 0.83 B/s (using 1191 data points, chi2=0.02)
[2026-01-09 21:07:16] 2026-01-10 02:06:06,668 | INFO     | could have reported an average CPU frequency of 2600 MHz (44 samples)
[2026-01-09 21:07:16] 2026-01-10 02:06:06,669 | INFO     | ..............................
[2026-01-09 21:07:16] 2026-01-10 02:06:06,669 | INFO     | . Timing measurements:
[2026-01-09 21:07:16] 2026-01-10 02:06:06,669 | INFO     | . get job = 0 s
[2026-01-09 21:07:16] 2026-01-10 02:06:06,669 | INFO     | . initial setup = 9 s
[2026-01-09 21:07:16] 2026-01-10 02:06:06,669 | INFO     | . payload setup = 71 s
[2026-01-09 21:07:16] 2026-01-10 02:06:06,669 | INFO     | . stage-in = 0 s
[2026-01-09 21:07:16] 2026-01-10 02:06:06,669 | INFO     | . payload execution = 75510 s
[2026-01-09 21:07:16] 2026-01-10 02:06:06,669 | INFO     | . stage-out = 10 s
[2026-01-09 21:07:16] 2026-01-10 02:06:06,669 | INFO     | . log creation = 2 s
[2026-01-09 21:07:16] 2026-01-10 02:06:06,669 | INFO     | ..............................
[2026-01-09 21:07:16] 2026-01-10 02:06:07,281 | INFO     | 
[2026-01-09 21:07:16] 2026-01-10 02:06:07,282 | INFO     | job summary report
[2026-01-09 21:07:16] 2026-01-10 02:06:07,282 | INFO     | --------------------------------------------------
[2026-01-09 21:07:16] 2026-01-10 02:06:07,286 | INFO     | PanDA job id: 6963152472
[2026-01-09 21:07:16] 2026-01-10 02:06:07,288 | INFO     | task id: 47898826
[2026-01-09 21:07:16] 2026-01-10 02:06:07,288 | INFO     | errors: (none)
[2026-01-09 21:07:16] 2026-01-10 02:06:07,288 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 21:07:16] 2026-01-10 02:06:07,288 | INFO     | pilot state: finished 
[2026-01-09 21:07:16] 2026-01-10 02:06:07,288 | INFO     | transexitcode: 0
[2026-01-09 21:07:16] 2026-01-10 02:06:07,288 | INFO     | exeerrorcode: 0
[2026-01-09 21:07:16] 2026-01-10 02:06:07,288 | INFO     | exeerrordiag: 
[2026-01-09 21:07:16] 2026-01-10 02:06:07,288 | INFO     | exitcode: 0
[2026-01-09 21:07:16] 2026-01-10 02:06:07,288 | INFO     | exitmsg: OK
[2026-01-09 21:07:16] 2026-01-10 02:06:07,288 | INFO     | cpuconsumptiontime: 71786 s
[2026-01-09 21:07:16] 2026-01-10 02:06:07,288 | INFO     | nevents: 400
[2026-01-09 21:07:16] 2026-01-10 02:06:07,289 | INFO     | neventsw: 0
[2026-01-09 21:07:16] 2026-01-10 02:06:07,289 | INFO     | pid: 3346118
[2026-01-09 21:07:16] 2026-01-10 02:06:07,289 | INFO     | pgrp: 3346118
[2026-01-09 21:07:16] 2026-01-10 02:06:07,289 | INFO     | corecount: 8
[2026-01-09 21:07:16] 2026-01-10 02:06:07,289 | INFO     | event service: False
[2026-01-09 21:07:16] 2026-01-10 02:06:07,289 | INFO     | sizes: {0: 2283140, 1: 2283741, 2: 2283825, 5: 2283909, 7: 2283909, 8: 2284080, 9: 2284236, 21: 2284264, 32: 2284292, 44: 2284320, 55: 2284348, 57: 2284918, 67: 22
[2026-01-09 21:07:16] 2026-01-10 02:06:07,289 | INFO     | --------------------------------------------------
[2026-01-09 21:07:16] 2026-01-10 02:06:07,289 | INFO     | 
[2026-01-09 21:07:16] 2026-01-10 02:06:07,289 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-01-09 21:07:16] 2026-01-10 02:06:07,513 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 21:07:16] 2026-01-10 02:06:07,513 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 21:07:16] 2026-01-10 02:06:07,513 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 21:07:16] 2026-01-10 02:06:07,513 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 21:07:16] 2026-01-10 02:06:07,514 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 21:07:16] 2026-01-10 02:06:07,514 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 21:07:16] 2026-01-10 02:06:07,514 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 21:07:16] 2026-01-10 02:06:07,514 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 21:07:16] 2026-01-10 02:06:07,514 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 21:07:16] 2026-01-10 02:06:07,514 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 21:07:16] 2026-01-10 02:06:07,514 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 21:07:16] 2026-01-10 02:06:07,514 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 21:07:16] 2026-01-10 02:06:07,525 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 21:07:16] 2026-01-10 02:06:07,526 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 21:07:16] 2026-01-10 02:06:07,526 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 21:07:16] 2026-01-10 02:06:07,526 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 21:07:16] 2026-01-10 02:06:07,526 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 21:07:16] 2026-01-10 02:06:07,526 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 21:07:16] 2026-01-10 02:06:07,526 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 21:07:16] 2026-01-10 02:06:07,526 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 21:07:16] 2026-01-10 02:06:07,526 | INFO     | job 6963152472 has completed (purged errors)
[2026-01-09 21:07:16] 2026-01-10 02:06:07,527 | INFO     | overall cleanup function is called
[2026-01-09 21:07:16] 2026-01-10 02:06:08,571 | INFO     | --- collectZombieJob: --- 10, [3346118]
[2026-01-09 21:07:16] 2026-01-10 02:06:08,572 | INFO     | zombie collector waiting for pid 3346118
[2026-01-09 21:07:16] 2026-01-10 02:06:08,572 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 21:07:16] 2026-01-10 02:06:08,572 | INFO     | collected zombie processes
[2026-01-09 21:07:16] 2026-01-10 02:06:08,572 | INFO     | will attempt to kill all subprocesses of pid=3346118
[2026-01-09 21:07:16] 2026-01-10 02:06:08,641 | INFO     | PID=3316556 has CPU usage=5.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 21:07:16] 2026-01-10 02:06:08,642 | INFO     | .. there are 35 such processes running
[2026-01-09 21:07:16] 2026-01-10 02:06:10,823 | INFO     | process IDs to be killed: [3346118] (in reverse order)
[2026-01-09 21:07:16] 2026-01-10 02:06:11,661 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 21:07:16] 2026-01-10 02:06:11,662 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 21:07:16] 2026-01-10 02:06:11,723 | INFO     | did not find any defunct processes belonging to 3346118
[2026-01-09 21:07:16] 2026-01-10 02:06:11,832 | INFO     | did not find any defunct processes belonging to 3346118
[2026-01-09 21:07:16] 2026-01-10 02:06:11,832 | INFO     | ready for new job
[2026-01-09 21:07:16] 2026-01-10 02:06:11,833 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 21:07:16] 2026-01-10 02:06:11,864 | INFO     | ***************************************
[2026-01-09 21:07:16] 2026-01-10 02:06:11,864 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 21:07:16] 2026-01-10 02:06:11,864 | INFO     | ***************************************
[2026-01-09 21:07:16] 2026-01-10 02:06:11,864 | INFO     | 
[2026-01-09 21:07:16] 2026-01-10 02:06:11,888 | INFO     | architecture information:
[2026-01-09 21:07:16] 2026-01-10 02:06:11,924 | INFO     | executing command: cat /etc/os-release
[2026-01-09 21:07:16] 2026-01-10 02:06:12,056 | INFO     | cat /etc/os-release:
[2026-01-09 21:07:16] NAME="CentOS Linux"
[2026-01-09 21:07:16] VERSION="7 (Core)"
[2026-01-09 21:07:16] ID="centos"
[2026-01-09 21:07:16] ID_LIKE="rhel fedora"
[2026-01-09 21:07:16] VERSION_ID="7"
[2026-01-09 21:07:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 21:07:16] ANSI_COLOR="0;31"
[2026-01-09 21:07:16] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 21:07:16] HOME_URL="https://www.centos.org/"
[2026-01-09 21:07:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 21:07:16] 
[2026-01-09 21:07:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 21:07:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 21:07:16] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 21:07:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 21:07:16] 
[2026-01-09 21:07:16] 2026-01-10 02:06:12,056 | INFO     | ***************************************
[2026-01-09 21:07:16] 2026-01-10 02:06:12,560 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-01-09 21:07:16] 2026-01-10 02:06:12,602 | INFO     | sufficient remaining disk space (75108450304 B)
[2026-01-09 21:07:16] 2026-01-10 02:06:12,602 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 21:07:16] 2026-01-10 02:06:12,602 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 21:07:16] 2026-01-10 02:06:12,603 | INFO     | update_server=False
[2026-01-09 21:07:16] 2026-01-10 02:06:12,603 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 21:07:16] 2026-01-10 02:06:12,603 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 21:07:16] 2026-01-10 02:06:13,082 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 21:07:16] 2026-01-10 02:06:13,083 | INFO     | aborting loop
[2026-01-09 21:07:16] 2026-01-10 02:06:13,095 | INFO     | all data control threads have been joined
[2026-01-09 21:07:16] 2026-01-10 02:06:13,608 | INFO     | [job] retrieve thread has finished
[2026-01-09 21:07:16] 2026-01-10 02:06:13,609 | INFO     | [job] queue monitor thread has finished
[2026-01-09 21:07:16] 2026-01-10 02:06:13,710 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 21:07:16] 2026-01-10 02:06:13,727 | INFO     | all payload control threads have been joined
[2026-01-09 21:07:16] 2026-01-10 02:06:13,754 | INFO     | [payload] failed_post thread has finished
[2026-01-09 21:07:16] 2026-01-10 02:06:13,845 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 21:07:16] 2026-01-10 02:06:13,870 | INFO     | [job] validate thread has finished
[2026-01-09 21:07:16] 2026-01-10 02:06:13,885 | INFO     | [data] copytool_in thread has finished
[2026-01-09 21:07:16] 2026-01-10 02:06:14,014 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 21:07:16] 2026-01-10 02:06:14,088 | INFO     | [job] job monitor thread has finished
[2026-01-09 21:07:16] 2026-01-10 02:06:14,101 | INFO     | [data] control thread has finished
[2026-01-09 21:07:16] 2026-01-10 02:06:14,119 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 21:07:16] 2026-01-10 02:06:14,169 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 21:07:16] 2026-01-10 02:06:14,274 | INFO     | all job control threads have been joined
[2026-01-09 21:07:16] 2026-01-10 02:06:14,702 | INFO     | [payload] validate_post thread has finished
[2026-01-09 21:07:16] 2026-01-10 02:06:14,733 | INFO     | [payload] control thread has finished
[2026-01-09 21:07:16] 2026-01-10 02:06:14,885 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 21:07:16] 2026-01-10 02:06:15,292 | INFO     | [job] control thread has finished
[2026-01-09 21:07:16] 2026-01-10 02:06:16,021 | INFO     | [data] copytool_out thread has finished
[2026-01-09 21:07:16] 2026-01-10 02:06:18,894 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 21:07:16] 2026-01-10 02:06:44,495 | INFO     | PID=3316556 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 21:07:16] 2026-01-10 02:06:44,495 | INFO     | .. there are 35 such processes running
[2026-01-09 21:07:16] 2026-01-10 02:06:44,495 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 21:07:16] 2026-01-10 02:06:44,495 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 21:07:16] 2026-01-10 02:06:44,495 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 21:07:16] 2026-01-10 02:07:06,745 | INFO     | [monitor] cgroup control has ended
[2026-01-09 21:07:16] 2026-01-10 02:07:08,010 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140164314543936)>', '<ExcThread(monitor, started 140163942430464)>']
[2026-01-09 21:07:16] 2026-01-10 02:07:08,711 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 21:07:16] 2026-01-10 02:07:08,712 | INFO     | [monitor] control thread has ended
[2026-01-09 21:07:16] 2026-01-10 02:07:13,036 | INFO     | all workflow threads have been joined
[2026-01-09 21:07:16] 2026-01-10 02:07:13,040 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 21:07:16] 2026-01-10 02:07:13,041 | INFO     | traces error code: 0
[2026-01-09 21:07:16] 2026-01-10 02:07:13,041 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 21:07:16] 2026-01-10 02:07:14,090 [wrapper] ==== pilot stdout END ====
[2026-01-09 21:07:16] 2026-01-10 02:07:14,109 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 21:07:16] 2026-01-10 02:07:14,126 [wrapper] pilotpid: 3316556
[2026-01-09 21:07:16] 2026-01-10 02:07:14,129 [wrapper] Pilot exit status: 0
[2026-01-09 21:07:16] 2026-01-10 02:07:14,317 [wrapper] pandaids: 6963152472
[2026-01-09 21:07:16] 2026-01-10 02:07:14,550 [wrapper] cleanup supervisor_pilot  812642 3316557
[2026-01-09 21:07:16] 2026-01-10 02:07:14,595 [wrapper] Test setup, not cleaning
[2026-01-09 21:07:16] 2026-01-10 02:07:14,659 [wrapper] apfmon messages muted
[2026-01-09 21:07:16] 2026-01-10 02:07:14,697 [wrapper] ==== wrapper stdout END ====
[2026-01-09 21:07:16] 2026-01-10 02:07:14,717 [wrapper] ==== wrapper stderr END ====
[2026-01-09 21:07:16]  *** Error codes and diagnostics ***
[2026-01-09 21:07:16]     "exeErrorCode": 0,
[2026-01-09 21:07:16]     "exeErrorDiag": "",
[2026-01-09 21:07:16]     "pilotErrorCode": 0,
[2026-01-09 21:07:16]     "pilotErrorDiag": "",
[2026-01-09 21:07:16]  *** Listing of results directory ***
[2026-01-09 21:07:16] total 454576
[2026-01-09 21:07:16] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 11:02 pilot3.tar.gz
[2026-01-09 21:07:16] -rwx------. 1 boincer umatlas     36322 Jan  8 11:04 runpilot2-wrapper.sh
[2026-01-09 21:07:16] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 11:04 queuedata.json
[2026-01-09 21:07:16] -rw-r--r--. 1 boincer umatlas       100 Jan  9 00:01 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 21:07:16] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 00:01 run_atlas
[2026-01-09 21:07:16] -rw-r--r--. 1 boincer umatlas       105 Jan  9 00:01 job.xml
[2026-01-09 21:07:16] -rw-r--r--. 2 boincer umatlas 224145140 Jan  9 00:01 EVNT.47898824._000870.pool.root.1
[2026-01-09 21:07:16] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 00:01 start_atlas.sh
[2026-01-09 21:07:16] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 00:01 shared
[2026-01-09 21:07:16] -rw-r--r--. 2 boincer umatlas    592399 Jan  9 00:01 input.tar.gz
[2026-01-09 21:07:16] -rw-r--r--. 1 boincer umatlas         0 Jan  9 00:01 boinc_lockfile
[2026-01-09 21:07:16] -rw-r--r--. 1 boincer umatlas      2518 Jan  9 00:01 pandaJob.out
[2026-01-09 21:07:16] -rw-------. 1 boincer umatlas        57 Jan  9 00:01 setup.sh.local
[2026-01-09 21:07:16] -rw-------. 1 boincer umatlas    989771 Jan  9 00:03 agis_schedconf.cvmfs.json
[2026-01-09 21:07:16] drwx------. 5 boincer umatlas      4096 Jan  9 00:03 pilot3
[2026-01-09 21:07:16] -rw-r--r--. 1 boincer umatlas      6659 Jan  9 21:00 init_data.xml
[2026-01-09 21:07:16] -rw-------. 1 boincer umatlas 219540746 Jan  9 21:02 HITS.47898826._029230.pool.root.1
[2026-01-09 21:07:16] -rw-r--r--. 1 boincer umatlas       531 Jan  9 21:02 boinc_task_state.xml
[2026-01-09 21:07:16] -rw-------. 1 boincer umatlas      1065 Jan  9 21:05 memory_monitor_summary.json
[2026-01-09 21:07:16] -rw-------. 1 boincer umatlas   1516240 Jan  9 21:05 agis_ddmendpoints.agis.ALL.json
[2026-01-09 21:07:16] -rw-------. 1 boincer umatlas   1120503 Jan  9 21:05 log.47898826._029230.job.log.tgz.1
[2026-01-09 21:07:16] -rw-------. 1 boincer umatlas        95 Jan  9 21:05 pilot_heartbeat.json
[2026-01-09 21:07:16] -rw-------. 1 boincer umatlas      7851 Jan  9 21:06 heartbeat.json
[2026-01-09 21:07:16] -rw-------. 1 boincer umatlas      4824 Jan  9 21:07 pilotlog.txt
[2026-01-09 21:07:16] -rw-------. 1 boincer umatlas   7825148 Jan  9 21:07 log.47898826._029230.job.log.1
[2026-01-09 21:07:16] -rw-------. 1 boincer umatlas       357 Jan  9 21:07 output.list
[2026-01-09 21:07:16] -rw-r--r--. 1 boincer umatlas      8192 Jan  9 21:07 boinc_mmap_file
[2026-01-09 21:07:16] -rw-r--r--. 1 boincer umatlas       620 Jan  9 21:07 runtime_log
[2026-01-09 21:07:16] -rw-------. 1 boincer umatlas   8960000 Jan  9 21:07 result.tar.gz
[2026-01-09 21:07:16] -rw-r--r--. 1 boincer umatlas        28 Jan  9 21:07 wrapper_checkpoint.txt
[2026-01-09 21:07:16] -rw-r--r--. 1 boincer umatlas      9328 Jan  9 21:07 runtime_log.err
[2026-01-09 21:07:16] -rw-------. 1 boincer umatlas       660 Jan  9 21:07 6gkKDmgf7x8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmBkfKDmaUG22m.diag
[2026-01-09 21:07:16] -rw-r--r--. 1 boincer umatlas     20938 Jan  9 21:07 stderr.txt
[2026-01-09 21:07:16] HITS file was successfully produced:
[2026-01-09 21:07:16] -rw-------. 1 boincer umatlas 219540746 Jan  9 21:02 shared/HITS.pool.root.1
[2026-01-09 21:07:16]  *** Contents of shared directory: ***
[2026-01-09 21:07:16] total 442640
[2026-01-09 21:07:16] -rw-r--r--. 2 boincer umatlas 224145140 Jan  9 00:01 ATLAS.root_0
[2026-01-09 21:07:16] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 00:01 start_atlas.sh
[2026-01-09 21:07:16] -rw-r--r--. 2 boincer umatlas    592399 Jan  9 00:01 input.tar.gz
[2026-01-09 21:07:16] -rw-------. 1 boincer umatlas 219540746 Jan  9 21:02 HITS.pool.root.1
[2026-01-09 21:07:16] -rw-------. 1 boincer umatlas   8960000 Jan  9 21:07 result.tar.gz
21:07:18 (3297055): run_atlas exited; CPU time 75066.012971
21:07:18 (3297055): called boinc_finish(0)

</stderr_txt>
]]>

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