Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
21:11:59 (4113622): wrapper (7.7.26015): starting
21:11:59 (4113622): wrapper: running run_atlas (--nthreads 3)
[2026-01-09 21:11:59] Arguments: --nthreads 3
[2026-01-09 21:11:59] Threads: 3
[2026-01-09 21:11:59] Checking for CVMFS
[2026-01-09 21:11:59] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 21:11:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 21:11:59] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 21:11:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 21:11:59] 2.9.2.0 3509459 2598 85160 154956 2 56 19824882 36864001 0 130560 0 1584626 99.987 102924 5052 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-09 21:11:59] CVMFS is ok
[2026-01-09 21:11:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 21:11:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 21:11:59] Further information can be found at the LHC@home message board.
[2026-01-09 21:11:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 21:11:59] Checking for apptainer binary...
[2026-01-09 21:11:59] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 21:11:59] Running /usr/bin/apptainer --version
[2026-01-09 21:11:59] apptainer version 1.4.1-1.1
[2026-01-09 21:11:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 21:11:59] thA361a
[2026-01-09 21:11:59] apptainer works
[2026-01-09 21:11:59] Set ATHENA_PROC_NUMBER=3
[2026-01-09 21:11:59] Set ATHENA_CORE_NUMBER=3
[2026-01-09 21:11:59] Starting ATLAS job with PandaID=6963148317
[2026-01-09 21:11:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 23:07:19]  *** The last 200 lines of the pilot log: ***
[2026-01-09 23:07:19] 2026-01-09 22:06:40,802 | INFO     | total number of processed events: 400 (read)
[2026-01-09 23:07:19] 2026-01-09 22:06:40,802 | INFO     | executing command: lscpu
[2026-01-09 23:07:19] 2026-01-09 22:06:40,818 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-09 23:07:19] 2026-01-09 22:06:41,343 | INFO     | PID=4117347 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 23:07:19] 2026-01-09 22:06:42,344 | INFO     | time since job start (6877s) is within the limit (349056.0s)
[2026-01-09 23:07:19] 2026-01-09 22:06:44,349 | INFO     | time since job start (6879s) is within the limit (349056.0s)
[2026-01-09 23:07:19] 2026-01-09 22:06:44,492 | WARNING  | process 4123791 can no longer be monitored (due to stat problems) - aborting
[2026-01-09 23:07:19] 2026-01-09 22:06:44,492 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6963148317/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 23:07:19] 2026-01-09 22:06:44,528 | INFO     | number of running child processes to parent process 4123791: 1
[2026-01-09 23:07:19] 2026-01-09 22:06:44,528 | INFO     | maximum number of monitored processes: 6
[2026-01-09 23:07:19] 2026-01-09 22:06:45,736 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 23:07:19] 2026-01-09 22:06:45,737 | INFO     | found 6 cores (6 cores per socket, 1 socket) HT, CPU MHz: 3677.7185833333333
[2026-01-09 23:07:19] 2026-01-09 22:06:45,738 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6963148317/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 23:07:19] 2026-01-09 22:06:45,738 | INFO     | extracted standard info from prmon json
[2026-01-09 23:07:19] 2026-01-09 22:06:45,738 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 23:07:19] 2026-01-09 22:06:45,738 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 23:07:19] 2026-01-09 22:06:45,738 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 23:07:19] 2026-01-09 22:06:45,739 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 23:07:19] 2026-01-09 22:06:45,739 | INFO     | fitting pss+swap vs Time
[2026-01-09 23:07:19] 2026-01-09 22:06:45,739 | INFO     | sum of square deviations: 447383272.0
[2026-01-09 23:07:19] 2026-01-09 22:06:45,740 | INFO     | sum of deviations: -15291895837.0
[2026-01-09 23:07:19] 2026-01-09 22:06:45,740 | INFO     | mean x: 1767992961.0
[2026-01-09 23:07:19] 2026-01-09 22:06:45,740 | INFO     | mean y: 2472891.3008849556
[2026-01-09 23:07:19] 2026-01-09 22:06:45,740 | INFO     | intersect: 60433798540.33232
[2026-01-09 23:07:19] 2026-01-09 22:06:45,740 | INFO     | chi2: 1.6102477385159801
[2026-01-09 23:07:19] 2026-01-09 22:06:45,740 | INFO     | sum of square deviations: 390582207.0
[2026-01-09 23:07:19] 2026-01-09 22:06:45,740 | INFO     | sum of deviations: -13303250818.999998
[2026-01-09 23:07:19] 2026-01-09 22:06:45,740 | INFO     | mean x: 1767992808.5
[2026-01-09 23:07:19] 2026-01-09 22:06:45,740 | INFO     | mean y: 2478233.7407407407
[2026-01-09 23:07:19] 2026-01-09 22:06:45,740 | INFO     | intersect: 60220407663.54636
[2026-01-09 23:07:19] 2026-01-09 22:06:45,740 | INFO     | chi2: 1.6105484132471517
[2026-01-09 23:07:19] 2026-01-09 22:06:45,740 | INFO     | current chi2=1.6105484132471517 (change=-0.018672575901188548 %)
[2026-01-09 23:07:19] 2026-01-09 22:06:45,740 | INFO     | right removable region: 107
[2026-01-09 23:07:19] 2026-01-09 22:06:45,740 | INFO     | sum of square deviations: 390582207.0
[2026-01-09 23:07:19] 2026-01-09 22:06:45,741 | INFO     | sum of deviations: -30153307323.5
[2026-01-09 23:07:19] 2026-01-09 22:06:45,741 | INFO     | mean x: 1767993113.5
[2026-01-09 23:07:19] 2026-01-09 22:06:45,741 | INFO     | mean y: 2511745.564814815
[2026-01-09 23:07:19] 2026-01-09 22:06:45,741 | INFO     | intersect: 136493213937.73384
[2026-01-09 23:07:19] 2026-01-09 22:06:45,741 | INFO     | chi2: 0.07456923128684019
[2026-01-09 23:07:19] 2026-01-09 22:06:45,741 | INFO     | current chi2=0.07456923128684019 (change=95.36908330915813 %)
[2026-01-09 23:07:19] 2026-01-09 22:06:45,741 | INFO     | sum of square deviations: 338804492.0
[2026-01-09 23:07:19] 2026-01-09 22:06:45,741 | INFO     | sum of deviations: -26628511841.000004
[2026-01-09 23:07:19] 2026-01-09 22:06:45,741 | INFO     | mean x: 1767993266.0
[2026-01-09 23:07:19] 2026-01-09 22:06:45,741 | INFO     | mean y: 2501341.3203883497
[2026-01-09 23:07:19] 2026-01-09 22:06:45,741 | INFO     | intersect: 138958833769.43137
[2026-01-09 23:07:19] 2026-01-09 22:06:45,741 | INFO     | chi2: 0.07395095692254935
[2026-01-09 23:07:19] 2026-01-09 22:06:45,741 | INFO     | current chi2=0.07395095692254935 (change=0.8291279843191132 %)
[2026-01-09 23:07:19] 2026-01-09 22:06:45,741 | INFO     | left removable region: 20
[2026-01-09 23:07:19] 2026-01-09 22:06:45,741 | INFO     | sum of square deviations: 204163828.0
[2026-01-09 23:07:19] 2026-01-09 22:06:45,741 | INFO     | sum of deviations: -16807255336.0
[2026-01-09 23:07:19] 2026-01-09 22:06:45,742 | INFO     | mean x: 1767993388.0
[2026-01-09 23:07:19] 2026-01-09 22:06:45,742 | INFO     | mean y: 2482594.5862068967
[2026-01-09 23:07:19] 2026-01-09 22:06:45,742 | INFO     | intersect: 145547933008.4358
[2026-01-09 23:07:19] 2026-01-09 22:06:45,742 | INFO     | chi2: 0.062642486376048
[2026-01-09 23:07:19] 2026-01-09 22:06:45,742 | INFO     | current memory leak: -82.32 B/s (using 87 data points, chi2=0.06)
[2026-01-09 23:07:19] 2026-01-09 22:06:45,742 | INFO     | could have reported an average CPU frequency of 3849 MHz (7 samples)
[2026-01-09 23:07:19] 2026-01-09 22:06:45,742 | INFO     | ..............................
[2026-01-09 23:07:19] 2026-01-09 22:06:45,742 | INFO     | . Timing measurements:
[2026-01-09 23:07:19] 2026-01-09 22:06:45,742 | INFO     | . get job = 0 s
[2026-01-09 23:07:19] 2026-01-09 22:06:45,742 | INFO     | . initial setup = 1 s
[2026-01-09 23:07:19] 2026-01-09 22:06:45,742 | INFO     | . payload setup = 3 s
[2026-01-09 23:07:19] 2026-01-09 22:06:45,742 | INFO     | . stage-in = 0 s
[2026-01-09 23:07:19] 2026-01-09 22:06:45,742 | INFO     | . payload execution = 6853 s
[2026-01-09 23:07:19] 2026-01-09 22:06:45,742 | INFO     | . stage-out = 0 s
[2026-01-09 23:07:19] 2026-01-09 22:06:45,742 | INFO     | . log creation = 0 s
[2026-01-09 23:07:19] 2026-01-09 22:06:45,742 | INFO     | ..............................
[2026-01-09 23:07:19] 2026-01-09 22:06:46,216 | INFO     | 
[2026-01-09 23:07:19] 2026-01-09 22:06:46,217 | INFO     | job summary report
[2026-01-09 23:07:19] 2026-01-09 22:06:46,217 | INFO     | --------------------------------------------------
[2026-01-09 23:07:19] 2026-01-09 22:06:46,217 | INFO     | PanDA job id: 6963148317
[2026-01-09 23:07:19] 2026-01-09 22:06:46,217 | INFO     | task id: 47898826
[2026-01-09 23:07:19] 2026-01-09 22:06:46,217 | INFO     | errors: (none)
[2026-01-09 23:07:19] 2026-01-09 22:06:46,217 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 23:07:19] 2026-01-09 22:06:46,217 | INFO     | pilot state: finished 
[2026-01-09 23:07:19] 2026-01-09 22:06:46,217 | INFO     | transexitcode: 0
[2026-01-09 23:07:19] 2026-01-09 22:06:46,217 | INFO     | exeerrorcode: 0
[2026-01-09 23:07:19] 2026-01-09 22:06:46,217 | INFO     | exeerrordiag: 
[2026-01-09 23:07:19] 2026-01-09 22:06:46,217 | INFO     | exitcode: 0
[2026-01-09 23:07:19] 2026-01-09 22:06:46,217 | INFO     | exitmsg: OK
[2026-01-09 23:07:19] 2026-01-09 22:06:46,217 | INFO     | cpuconsumptiontime: 19841 s
[2026-01-09 23:07:19] 2026-01-09 22:06:46,217 | INFO     | nevents: 400
[2026-01-09 23:07:19] 2026-01-09 22:06:46,217 | INFO     | neventsw: 0
[2026-01-09 23:07:19] 2026-01-09 22:06:46,217 | INFO     | pid: 4123791
[2026-01-09 23:07:19] 2026-01-09 22:06:46,217 | INFO     | pgrp: 4123791
[2026-01-09 23:07:19] 2026-01-09 22:06:46,217 | INFO     | corecount: 3
[2026-01-09 23:07:19] 2026-01-09 22:06:46,217 | INFO     | event service: False
[2026-01-09 23:07:19] 2026-01-09 22:06:46,217 | INFO     | sizes: {0: 2283973, 3: 2284235, 11: 2284263, 6860: 2311607, 6861: 2320667, 6867: 2320805}
[2026-01-09 23:07:19] 2026-01-09 22:06:46,217 | INFO     | --------------------------------------------------
[2026-01-09 23:07:19] 2026-01-09 22:06:46,217 | INFO     | 
[2026-01-09 23:07:19] 2026-01-09 22:06:46,217 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2026-01-09 23:07:19] 2026-01-09 22:06:46,233 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 23:07:19] 2026-01-09 22:06:46,233 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 23:07:19] 2026-01-09 22:06:46,233 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 23:07:19] 2026-01-09 22:06:46,233 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 23:07:19] 2026-01-09 22:06:46,233 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 23:07:19] 2026-01-09 22:06:46,233 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 23:07:19] 2026-01-09 22:06:46,233 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 23:07:19] 2026-01-09 22:06:46,233 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 23:07:19] 2026-01-09 22:06:46,233 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 23:07:19] 2026-01-09 22:06:46,233 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 23:07:19] 2026-01-09 22:06:46,233 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 23:07:19] 2026-01-09 22:06:46,233 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 23:07:19] 2026-01-09 22:06:46,233 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 23:07:19] 2026-01-09 22:06:46,233 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 23:07:19] 2026-01-09 22:06:46,233 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 23:07:19] 2026-01-09 22:06:46,233 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 23:07:19] 2026-01-09 22:06:46,233 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 23:07:19] 2026-01-09 22:06:46,233 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 23:07:19] 2026-01-09 22:06:46,233 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 23:07:19] 2026-01-09 22:06:46,233 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 23:07:19] 2026-01-09 22:06:46,233 | INFO     | job 6963148317 has completed (purged errors)
[2026-01-09 23:07:19] 2026-01-09 22:06:46,234 | INFO     | overall cleanup function is called
[2026-01-09 23:07:19] 2026-01-09 22:06:47,240 | INFO     | --- collectZombieJob: --- 10, [4123791]
[2026-01-09 23:07:19] 2026-01-09 22:06:47,241 | INFO     | zombie collector waiting for pid 4123791
[2026-01-09 23:07:19] 2026-01-09 22:06:47,241 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 23:07:19] 2026-01-09 22:06:47,241 | INFO     | collected zombie processes
[2026-01-09 23:07:19] 2026-01-09 22:06:47,241 | INFO     | will attempt to kill all subprocesses of pid=4123791
[2026-01-09 23:07:19] 2026-01-09 22:06:47,282 | INFO     | process IDs to be killed: [4123791] (in reverse order)
[2026-01-09 23:07:19] 2026-01-09 22:06:47,307 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 23:07:19] 2026-01-09 22:06:47,307 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 23:07:19] 2026-01-09 22:06:47,308 | INFO     | did not find any defunct processes belonging to 4123791
[2026-01-09 23:07:19] 2026-01-09 22:06:47,309 | INFO     | did not find any defunct processes belonging to 4123791
[2026-01-09 23:07:19] 2026-01-09 22:06:47,309 | INFO     | ready for new job
[2026-01-09 23:07:19] 2026-01-09 22:06:47,309 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 23:07:19] 2026-01-09 22:06:47,310 | INFO     | ***************************************
[2026-01-09 23:07:19] 2026-01-09 22:06:47,310 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 23:07:19] 2026-01-09 22:06:47,310 | INFO     | ***************************************
[2026-01-09 23:07:19] 2026-01-09 22:06:47,310 | INFO     | 
[2026-01-09 23:07:19] 2026-01-09 22:06:47,311 | INFO     | architecture information:
[2026-01-09 23:07:19] 2026-01-09 22:06:47,311 | INFO     | executing command: cat /etc/os-release
[2026-01-09 23:07:19] 2026-01-09 22:06:47,320 | INFO     | cat /etc/os-release:
[2026-01-09 23:07:19] NAME="CentOS Linux"
[2026-01-09 23:07:19] VERSION="7 (Core)"
[2026-01-09 23:07:19] ID="centos"
[2026-01-09 23:07:19] ID_LIKE="rhel fedora"
[2026-01-09 23:07:19] VERSION_ID="7"
[2026-01-09 23:07:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 23:07:19] ANSI_COLOR="0;31"
[2026-01-09 23:07:19] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 23:07:19] HOME_URL="https://www.centos.org/"
[2026-01-09 23:07:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 23:07:19] 
[2026-01-09 23:07:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 23:07:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 23:07:19] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 23:07:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 23:07:19] 
[2026-01-09 23:07:19] 2026-01-09 22:06:47,320 | INFO     | ***************************************
[2026-01-09 23:07:19] 2026-01-09 22:06:47,823 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-01-09 23:07:19] 2026-01-09 22:06:47,836 | INFO     | sufficient remaining disk space (284519563264 B)
[2026-01-09 23:07:19] 2026-01-09 22:06:47,836 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 23:07:19] 2026-01-09 22:06:47,837 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 23:07:19] 2026-01-09 22:06:47,837 | INFO     | update_server=False
[2026-01-09 23:07:19] 2026-01-09 22:06:47,837 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 23:07:19] 2026-01-09 22:06:47,837 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 23:07:19] 2026-01-09 22:06:48,037 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 23:07:19] 2026-01-09 22:06:48,037 | INFO     | aborting loop
[2026-01-09 23:07:19] 2026-01-09 22:06:48,128 | INFO     | all data control threads have been joined
[2026-01-09 23:07:19] 2026-01-09 22:06:48,226 | INFO     | all payload control threads have been joined
[2026-01-09 23:07:19] 2026-01-09 22:06:48,842 | INFO     | [job] retrieve thread has finished
[2026-01-09 23:07:19] 2026-01-09 22:06:48,918 | INFO     | [payload] validate_post thread has finished
[2026-01-09 23:07:19] 2026-01-09 22:06:49,043 | INFO     | [job] job monitor thread has finished
[2026-01-09 23:07:19] 2026-01-09 22:06:49,134 | INFO     | [data] control thread has finished
[2026-01-09 23:07:19] 2026-01-09 22:06:49,135 | INFO     | all job control threads have been joined
[2026-01-09 23:07:19] 2026-01-09 22:06:49,228 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 23:07:19] 2026-01-09 22:06:49,231 | INFO     | [payload] control thread has finished
[2026-01-09 23:07:19] 2026-01-09 22:06:49,784 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 23:07:19] 2026-01-09 22:06:49,843 | INFO     | [data] copytool_out thread has finished
[2026-01-09 23:07:19] 2026-01-09 22:06:49,988 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 23:07:19] 2026-01-09 22:06:49,990 | INFO     | [data] copytool_in thread has finished
[2026-01-09 23:07:19] 2026-01-09 22:06:50,015 | INFO     | [payload] failed_post thread has finished
[2026-01-09 23:07:19] 2026-01-09 22:06:50,137 | INFO     | [job] control thread has finished
[2026-01-09 23:07:19] 2026-01-09 22:06:50,221 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 23:07:19] 2026-01-09 22:06:50,235 | INFO     | [job] validate thread has finished
[2026-01-09 23:07:19] 2026-01-09 22:06:50,306 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 23:07:19] 2026-01-09 22:06:50,785 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 23:07:19] 2026-01-09 22:06:51,790 | INFO     | [job] queue monitor thread has finished
[2026-01-09 23:07:19] 2026-01-09 22:06:53,995 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 23:07:19] 2026-01-09 22:07:13,209 | INFO     | [monitor] cgroup control has ended
[2026-01-09 23:07:19] 2026-01-09 22:07:14,561 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139671300298560)>', '<ExcThread(monitor, started 139670943930112)>']
[2026-01-09 23:07:19] 2026-01-09 22:07:17,481 | INFO     | PID=4117347 has CPU usage=0.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 23:07:19] 2026-01-09 22:07:17,481 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 23:07:19] 2026-01-09 22:07:17,481 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 23:07:19] 2026-01-09 22:07:17,481 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 23:07:19] 2026-01-09 22:07:17,481 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 23:07:19] 2026-01-09 22:07:17,481 | INFO     | [monitor] control thread has ended
[2026-01-09 23:07:19] 2026-01-09 22:07:19,587 | INFO     | all workflow threads have been joined
[2026-01-09 23:07:19] 2026-01-09 22:07:19,587 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 23:07:19] 2026-01-09 22:07:19,588 | INFO     | traces error code: 0
[2026-01-09 23:07:19] 2026-01-09 22:07:19,588 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 23:07:19] 2026-01-09 22:07:19,638 [wrapper] ==== pilot stdout END ====
[2026-01-09 23:07:19] 2026-01-09 22:07:19,640 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 23:07:19] 2026-01-09 22:07:19,643 [wrapper] pilotpid: 4117347
[2026-01-09 23:07:19] 2026-01-09 22:07:19,645 [wrapper] Pilot exit status: 0
[2026-01-09 23:07:19] 2026-01-09 22:07:19,653 [wrapper] pandaids: 6963148317
[2026-01-09 23:07:19] 2026-01-09 22:07:19,670 [wrapper] cleanup supervisor_pilot 4138205 4117348
[2026-01-09 23:07:19] 2026-01-09 22:07:19,673 [wrapper] Test setup, not cleaning
[2026-01-09 23:07:19] 2026-01-09 22:07:19,676 [wrapper] apfmon messages muted
[2026-01-09 23:07:19] 2026-01-09 22:07:19,678 [wrapper] ==== wrapper stdout END ====
[2026-01-09 23:07:19] 2026-01-09 22:07:19,680 [wrapper] ==== wrapper stderr END ====
[2026-01-09 23:07:19]  *** Error codes and diagnostics ***
[2026-01-09 23:07:19]     "exeErrorCode": 0,
[2026-01-09 23:07:19]     "exeErrorDiag": "",
[2026-01-09 23:07:19]     "pilotErrorCode": 0,
[2026-01-09 23:07:19]     "pilotErrorDiag": "",
[2026-01-09 23:07:19]  *** Listing of results directory ***
[2026-01-09 23:07:19] total 441216
[2026-01-09 23:07:19] -rw-r--r-- 1 boinc boinc      5112 Jan  8 17:02 queuedata.json
[2026-01-09 23:07:19] -rw-r--r-- 1 boinc boinc    579449 Jan  8 17:02 pilot3.tar.gz
[2026-01-09 23:07:19] -rwx------ 1 boinc boinc     36322 Jan  8 17:03 runpilot2-wrapper.sh
[2026-01-09 23:07:19] -rw-r--r-- 1 boinc boinc       100 Jan  9 21:11 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 23:07:19] -rwxr-xr-x 1 boinc boinc      7986 Jan  9 21:11 run_atlas
[2026-01-09 23:07:19] -rw-r--r-- 1 boinc boinc       105 Jan  9 21:11 job.xml
[2026-01-09 23:07:19] -rw-r--r-- 2 boinc boinc 226909659 Jan  9 21:11 EVNT.47898824._001104.pool.root.1
[2026-01-09 23:07:19] drwxrwx--x 2 boinc boinc      4096 Jan  9 21:11 shared
[2026-01-09 23:07:19] -rw-r--r-- 2 boinc boinc    592398 Jan  9 21:11 input.tar.gz
[2026-01-09 23:07:19] -rw-r--r-- 2 boinc boinc     15847 Jan  9 21:11 start_atlas.sh
[2026-01-09 23:07:19] -rw-r--r-- 1 boinc boinc         0 Jan  9 21:11 boinc_setup_complete
[2026-01-09 23:07:19] -rw-r--r-- 1 boinc boinc      6448 Jan  9 21:11 init_data.xml
[2026-01-09 23:07:19] -rw-r--r-- 1 boinc boinc         0 Jan  9 21:11 boinc_lockfile
[2026-01-09 23:07:19] -rw-r--r-- 1 boinc boinc      2519 Jan  9 21:11 pandaJob.out
[2026-01-09 23:07:19] -rw------- 1 boinc boinc    989381 Jan  9 21:12 agis_schedconf.cvmfs.json
[2026-01-09 23:07:19] -rw------- 1 boinc boinc   1516240 Jan  9 21:12 agis_ddmendpoints.agis.ALL.json
[2026-01-09 23:07:19] drwx------ 5 boinc boinc      4096 Jan  9 21:12 pilot3
[2026-01-09 23:07:19] -rw-r--r-- 1 boinc boinc       529 Jan  9 23:06 boinc_task_state.xml
[2026-01-09 23:07:19] -rw------- 1 boinc boinc 218420638 Jan  9 23:06 HITS.47898826._027988.pool.root.1
[2026-01-09 23:07:19] -rw------- 1 boinc boinc      1013 Jan  9 23:06 memory_monitor_summary.json
[2026-01-09 23:07:19] -rw------- 1 boinc boinc        95 Jan  9 23:06 pilot_heartbeat.json
[2026-01-09 23:07:19] -rw------- 1 boinc boinc    286525 Jan  9 23:06 log.47898826._027988.job.log.tgz.1
[2026-01-09 23:07:19] -rw------- 1 boinc boinc      7750 Jan  9 23:06 heartbeat.json
[2026-01-09 23:07:19] -rw-r--r-- 1 boinc boinc      8192 Jan  9 23:07 boinc_mmap_file
[2026-01-09 23:07:19] -rw-r--r-- 1 boinc boinc        27 Jan  9 23:07 wrapper_checkpoint.txt
[2026-01-09 23:07:19] -rw------- 1 boinc boinc      4752 Jan  9 23:07 pilotlog.txt
[2026-01-09 23:07:19] -rw------- 1 boinc boinc    992595 Jan  9 23:07 log.47898826._027988.job.log.1
[2026-01-09 23:07:19] -rw------- 1 boinc boinc       357 Jan  9 23:07 output.list
[2026-01-09 23:07:19] -rw-r--r-- 1 boinc boinc       620 Jan  9 23:07 runtime_log
[2026-01-09 23:07:19] -rw------- 1 boinc boinc   1300480 Jan  9 23:07 result.tar.gz
[2026-01-09 23:07:19] -rw-r--r-- 1 boinc boinc      8902 Jan  9 23:07 runtime_log.err
[2026-01-09 23:07:19] -rw------- 1 boinc boinc       660 Jan  9 23:07 2oQKDm4e7x8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmNtkKDmHkLibm.diag
[2026-01-09 23:07:19] -rw-r--r-- 1 boinc boinc     21458 Jan  9 23:07 stderr.txt
[2026-01-09 23:07:19] HITS file was successfully produced:
[2026-01-09 23:07:19] -rw------- 1 boinc boinc 218420638 Jan  9 23:06 shared/HITS.pool.root.1
[2026-01-09 23:07:19]  *** Contents of shared directory: ***
[2026-01-09 23:07:19] total 436772
[2026-01-09 23:07:19] -rw-r--r-- 2 boinc boinc 226909659 Jan  9 21:11 ATLAS.root_0
[2026-01-09 23:07:19] -rw-r--r-- 2 boinc boinc    592398 Jan  9 21:11 input.tar.gz
[2026-01-09 23:07:19] -rw-r--r-- 2 boinc boinc     15847 Jan  9 21:11 start_atlas.sh
[2026-01-09 23:07:19] -rw------- 1 boinc boinc 218420638 Jan  9 23:06 HITS.pool.root.1
[2026-01-09 23:07:19] -rw------- 1 boinc boinc   1300480 Jan  9 23:07 result.tar.gz
23:07:21 (4113622): run_atlas exited; CPU time 19865.535924
23:07:21 (4113622): called boinc_finish(0)

</stderr_txt>
]]>

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