Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:04:39 (3733454): wrapper (7.7.26015): starting
00:04:39 (3733454): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 00:04:40] Arguments: --nthreads 8
[2026-01-09 00:04:40] Threads: 8
[2026-01-09 00:04:40] Checking for CVMFS
[2026-01-09 00:04:41] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 00:04:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 00:04:42] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 00:04:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 00:04:44] 2.13.3.0 8980 92969 357444 154931 0 425 22727290 32935936 29979 16776704 0 437959481 99.709 328502368 33572 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-09 00:04:44] CVMFS is ok
[2026-01-09 00:04:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 00:04:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 00:04:44] Further information can be found at the LHC@home message board.
[2026-01-09 00:04:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 00:04:44] Checking for apptainer binary...
[2026-01-09 00:04:44] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 00:04:44] Running /usr/bin/apptainer --version
[2026-01-09 00:04:44] apptainer version 1.4.5-2.el9
[2026-01-09 00:04:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 00:04:47] c-5-4.aglt2.org
[2026-01-09 00:04:47] apptainer works
[2026-01-09 00:04:47] Set ATHENA_PROC_NUMBER=8
[2026-01-09 00:04:47] Set ATHENA_CORE_NUMBER=8
[2026-01-09 00:04:47] Starting ATLAS job with PandaID=6963148395
[2026-01-09 00:04:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 03:02:12]  *** The last 200 lines of the pilot log: ***
[2026-01-10 03:02:12] 2026-01-10 08:01:12,695 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-10 03:02:12] 2026-01-10 08:01:12,695 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-10 03:02:12] 2026-01-10 08:01:12,735 | INFO     | fitting pss+swap vs Time
[2026-01-10 03:02:12] 2026-01-10 08:01:12,738 | INFO     | sum of square deviations: 1227680925792.7551
[2026-01-10 03:02:12] 2026-01-10 08:01:13,141 | INFO     | sum of deviations: 2005212402179.0005
[2026-01-10 03:02:12] 2026-01-10 08:01:13,142 | INFO     | mean x: 1767983776.5897598
[2026-01-10 03:02:12] 2026-01-10 08:01:13,142 | INFO     | mean y: 2491498.9013906447
[2026-01-10 03:02:12] 2026-01-10 08:01:13,142 | INFO     | intersect: -2885215657.8908424
[2026-01-10 03:02:12] 2026-01-10 08:01:13,153 | INFO     | time since job start (96829s) is within the limit (349056.0s)
[2026-01-10 03:02:12] 2026-01-10 08:01:13,154 | INFO     | chi2: 10.584396619493546
[2026-01-10 03:02:12] 2026-01-10 08:01:13,177 | INFO     | sum of square deviations: 1216077604502.922
[2026-01-10 03:02:12] 2026-01-10 08:01:13,650 | INFO     | sum of deviations: 2408118335045.851
[2026-01-10 03:02:12] 2026-01-10 08:01:13,650 | INFO     | mean x: 1767983624.0944831
[2026-01-10 03:02:12] 2026-01-10 08:01:13,650 | INFO     | mean y: 2496790.9137603045
[2026-01-10 03:02:12] 2026-01-10 08:01:13,650 | INFO     | intersect: -3498524661.564198
[2026-01-10 03:02:12] 2026-01-10 08:01:13,652 | INFO     | chi2: 7.721856325321878
[2026-01-10 03:02:12] 2026-01-10 08:01:13,653 | INFO     | current chi2=7.721856325321878 (change=27.04490767947657 %)
[2026-01-10 03:02:12] 2026-01-10 08:01:13,655 | INFO     | sum of square deviations: 1204547441039.9148
[2026-01-10 03:02:12] 2026-01-10 08:01:13,725 | INFO     | sum of deviations: 2392925210088.503
[2026-01-10 03:02:12] 2026-01-10 08:01:13,726 | INFO     | mean x: 1767983471.5979643
[2026-01-10 03:02:12] 2026-01-10 08:01:13,726 | INFO     | mean y: 2496589.9707379136
[2026-01-10 03:02:12] 2026-01-10 08:01:13,726 | INFO     | intersect: -3509737196.8148913
[2026-01-10 03:02:12] 2026-01-10 08:01:13,728 | INFO     | chi2: 7.722106107590066
[2026-01-10 03:02:12] 2026-01-10 08:01:13,729 | INFO     | current chi2=7.722106107590066 (change=-0.0032347437930057336 %)
[2026-01-10 03:02:12] 2026-01-10 08:01:13,729 | INFO     | right removable region: 1571
[2026-01-10 03:02:12] 2026-01-10 08:01:13,732 | INFO     | sum of square deviations: 1216075876613.351
[2026-01-10 03:02:12] 2026-01-10 08:01:13,802 | INFO     | sum of deviations: 1482260151374.323
[2026-01-10 03:02:12] 2026-01-10 08:01:13,802 | INFO     | mean x: 1767983929.0963855
[2026-01-10 03:02:12] 2026-01-10 08:01:13,803 | INFO     | mean y: 2498370.0570703866
[2026-01-10 03:02:12] 2026-01-10 08:01:13,803 | INFO     | intersect: -2152475819.2738786
[2026-01-10 03:02:12] 2026-01-10 08:01:13,805 | INFO     | chi2: 6.709918453021681
[2026-01-10 03:02:12] 2026-01-10 08:01:13,805 | INFO     | current chi2=6.709918453021681 (change=36.60556483055579 %)
[2026-01-10 03:02:12] 2026-01-10 08:01:13,808 | INFO     | sum of square deviations: 1204544657659.3206
[2026-01-10 03:02:12] 2026-01-10 08:01:13,879 | INFO     | sum of deviations: 1068180489380.9222
[2026-01-10 03:02:12] 2026-01-10 08:01:13,879 | INFO     | mean x: 1767984081.5998728
[2026-01-10 03:02:12] 2026-01-10 08:01:13,879 | INFO     | mean y: 2503845.59605598
[2026-01-10 03:02:12] 2026-01-10 08:01:13,879 | INFO     | intersect: -1565330181.5547757
[2026-01-10 03:02:12] 2026-01-10 08:01:13,881 | INFO     | chi2: 4.345355178068213
[2026-01-10 03:02:12] 2026-01-10 08:01:13,881 | INFO     | current chi2=4.345355178068213 (change=35.2398213407293 %)
[2026-01-10 03:02:12] 2026-01-10 08:01:13,883 | INFO     | sum of square deviations: 1193086557575.251
[2026-01-10 03:02:12] 2026-01-10 08:01:13,982 | INFO     | sum of deviations: 828974953606.0444
[2026-01-10 03:02:12] 2026-01-10 08:01:13,983 | INFO     | mean x: 1767984234.1033823
[2026-01-10 03:02:12] 2026-01-10 08:01:13,983 | INFO     | mean y: 2507027.746649649
[2026-01-10 03:02:12] 2026-01-10 08:01:13,983 | INFO     | intersect: -1225915704.1469073
[2026-01-10 03:02:12] 2026-01-10 08:01:13,988 | INFO     | chi2: 3.52235417443562
[2026-01-10 03:02:12] 2026-01-10 08:01:13,988 | INFO     | current chi2=3.52235417443562 (change=18.939786735648827 %)
[2026-01-10 03:02:12] 2026-01-10 08:01:13,988 | INFO     | left removable region: 30
[2026-01-10 03:02:12] 2026-01-10 08:01:13,990 | INFO     | sum of square deviations: 1134677081116.7905
[2026-01-10 03:02:12] 2026-01-10 08:01:14,121 | INFO     | sum of deviations: 912205373967.2054
[2026-01-10 03:02:12] 2026-01-10 08:01:14,121 | INFO     | mean x: 1767984356.1200519
[2026-01-10 03:02:12] 2026-01-10 08:01:14,121 | INFO     | mean y: 2516412.420506165
[2026-01-10 03:02:12] 2026-01-10 08:01:14,121 | INFO     | intersect: -1418826150.6594837
[2026-01-10 03:02:12] 2026-01-10 08:01:14,126 | INFO     | chi2: 0.1855285407668863
[2026-01-10 03:02:12] 2026-01-10 08:01:14,127 | INFO     | current memory leak: 0.80 B/s (using 1541 data points, chi2=0.19)
[2026-01-10 03:02:12] 2026-01-10 08:01:14,128 | INFO     | could have reported an average CPU frequency of 2600 MHz (55 samples)
[2026-01-10 03:02:12] 2026-01-10 08:01:14,128 | INFO     | ..............................
[2026-01-10 03:02:12] 2026-01-10 08:01:14,128 | INFO     | . Timing measurements:
[2026-01-10 03:02:12] 2026-01-10 08:01:14,128 | INFO     | . get job = 0 s
[2026-01-10 03:02:12] 2026-01-10 08:01:14,129 | INFO     | . initial setup = 12 s
[2026-01-10 03:02:12] 2026-01-10 08:01:14,129 | INFO     | . payload setup = 98 s
[2026-01-10 03:02:12] 2026-01-10 08:01:14,129 | INFO     | . stage-in = 0 s
[2026-01-10 03:02:12] 2026-01-10 08:01:14,129 | INFO     | . payload execution = 96507 s
[2026-01-10 03:02:12] 2026-01-10 08:01:14,129 | INFO     | . stage-out = 14 s
[2026-01-10 03:02:12] 2026-01-10 08:01:14,129 | INFO     | . log creation = 3 s
[2026-01-10 03:02:12] 2026-01-10 08:01:14,134 | INFO     | ..............................
[2026-01-10 03:02:12] 2026-01-10 08:01:14,692 | INFO     | 
[2026-01-10 03:02:12] 2026-01-10 08:01:14,692 | INFO     | job summary report
[2026-01-10 03:02:12] 2026-01-10 08:01:14,692 | INFO     | --------------------------------------------------
[2026-01-10 03:02:12] 2026-01-10 08:01:14,693 | INFO     | PanDA job id: 6963148395
[2026-01-10 03:02:12] 2026-01-10 08:01:14,693 | INFO     | task id: 47898826
[2026-01-10 03:02:12] 2026-01-10 08:01:14,693 | INFO     | errors: (none)
[2026-01-10 03:02:12] 2026-01-10 08:01:14,693 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 03:02:12] 2026-01-10 08:01:14,693 | INFO     | pilot state: finished 
[2026-01-10 03:02:12] 2026-01-10 08:01:14,693 | INFO     | transexitcode: 0
[2026-01-10 03:02:12] 2026-01-10 08:01:14,693 | INFO     | exeerrorcode: 0
[2026-01-10 03:02:12] 2026-01-10 08:01:14,693 | INFO     | exeerrordiag: 
[2026-01-10 03:02:12] 2026-01-10 08:01:14,693 | INFO     | exitcode: 0
[2026-01-10 03:02:12] 2026-01-10 08:01:14,693 | INFO     | exitmsg: OK
[2026-01-10 03:02:12] 2026-01-10 08:01:14,694 | INFO     | cpuconsumptiontime: 73362 s
[2026-01-10 03:02:12] 2026-01-10 08:01:14,694 | INFO     | nevents: 400
[2026-01-10 03:02:12] 2026-01-10 08:01:14,694 | INFO     | neventsw: 0
[2026-01-10 03:02:12] 2026-01-10 08:01:14,694 | INFO     | pid: 3780622
[2026-01-10 03:02:12] 2026-01-10 08:01:14,694 | INFO     | pgrp: 3780622
[2026-01-10 03:02:12] 2026-01-10 08:01:14,694 | INFO     | corecount: 8
[2026-01-10 03:02:12] 2026-01-10 08:01:14,694 | INFO     | event service: False
[2026-01-10 03:02:12] 2026-01-10 08:01:14,694 | INFO     | sizes: {0: 2283142, 1: 2283743, 2: 2283827, 5: 2283855, 6: 2283855, 7: 2284082, 9: 2284238, 12: 2284266, 24: 2284294, 35: 2284322, 48: 2284350, 59: 2284658, 71: 22
[2026-01-10 03:02:12] 2026-01-10 08:01:14,695 | INFO     | --------------------------------------------------
[2026-01-10 03:02:12] 2026-01-10 08:01:14,695 | INFO     | 
[2026-01-10 03:02:12] 2026-01-10 08:01:14,695 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-01-10 03:02:12] 2026-01-10 08:01:14,836 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 03:02:12] 2026-01-10 08:01:14,836 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 03:02:12] 2026-01-10 08:01:14,836 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 03:02:12] 2026-01-10 08:01:14,836 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 03:02:12] 2026-01-10 08:01:14,836 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 03:02:12] 2026-01-10 08:01:14,836 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 03:02:12] 2026-01-10 08:01:14,837 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 03:02:12] 2026-01-10 08:01:14,837 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 03:02:12] 2026-01-10 08:01:14,837 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 03:02:12] 2026-01-10 08:01:14,837 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 03:02:12] 2026-01-10 08:01:14,837 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 03:02:12] 2026-01-10 08:01:14,837 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 03:02:12] 2026-01-10 08:01:14,837 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 03:02:12] 2026-01-10 08:01:14,837 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 03:02:12] 2026-01-10 08:01:14,837 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 03:02:12] 2026-01-10 08:01:14,837 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 03:02:12] 2026-01-10 08:01:14,837 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 03:02:12] 2026-01-10 08:01:14,838 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 03:02:12] 2026-01-10 08:01:14,838 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 03:02:12] 2026-01-10 08:01:14,838 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 03:02:12] 2026-01-10 08:01:14,838 | INFO     | job 6963148395 has completed (purged errors)
[2026-01-10 03:02:12] 2026-01-10 08:01:14,838 | INFO     | overall cleanup function is called
[2026-01-10 03:02:12] 2026-01-10 08:01:15,875 | INFO     | --- collectZombieJob: --- 10, [3780622]
[2026-01-10 03:02:12] 2026-01-10 08:01:15,876 | INFO     | zombie collector waiting for pid 3780622
[2026-01-10 03:02:12] 2026-01-10 08:01:15,876 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 03:02:12] 2026-01-10 08:01:15,876 | INFO     | collected zombie processes
[2026-01-10 03:02:12] 2026-01-10 08:01:15,876 | INFO     | will attempt to kill all subprocesses of pid=3780622
[2026-01-10 03:02:12] 2026-01-10 08:01:19,608 | INFO     | process IDs to be killed: [3780622] (in reverse order)
[2026-01-10 03:02:12] 2026-01-10 08:01:19,915 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 03:02:12] 2026-01-10 08:01:19,916 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 03:02:12] 2026-01-10 08:01:19,932 | INFO     | did not find any defunct processes belonging to 3780622
[2026-01-10 03:02:12] 2026-01-10 08:01:19,950 | INFO     | did not find any defunct processes belonging to 3780622
[2026-01-10 03:02:12] 2026-01-10 08:01:19,950 | INFO     | ready for new job
[2026-01-10 03:02:12] 2026-01-10 08:01:19,950 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 03:02:12] 2026-01-10 08:01:19,954 | INFO     | ***************************************
[2026-01-10 03:02:12] 2026-01-10 08:01:19,954 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 03:02:12] 2026-01-10 08:01:19,954 | INFO     | ***************************************
[2026-01-10 03:02:12] 2026-01-10 08:01:19,954 | INFO     | 
[2026-01-10 03:02:12] 2026-01-10 08:01:19,956 | INFO     | architecture information:
[2026-01-10 03:02:12] 2026-01-10 08:01:19,956 | INFO     | executing command: cat /etc/os-release
[2026-01-10 03:02:12] 2026-01-10 08:01:20,136 | INFO     | cat /etc/os-release:
[2026-01-10 03:02:12] NAME="CentOS Linux"
[2026-01-10 03:02:12] VERSION="7 (Core)"
[2026-01-10 03:02:12] ID="centos"
[2026-01-10 03:02:12] ID_LIKE="rhel fedora"
[2026-01-10 03:02:12] VERSION_ID="7"
[2026-01-10 03:02:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 03:02:12] ANSI_COLOR="0;31"
[2026-01-10 03:02:12] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 03:02:12] HOME_URL="https://www.centos.org/"
[2026-01-10 03:02:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 03:02:12] 
[2026-01-10 03:02:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 03:02:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 03:02:12] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 03:02:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 03:02:12] 
[2026-01-10 03:02:12] 2026-01-10 08:01:20,136 | INFO     | ***************************************
[2026-01-10 03:02:12] 2026-01-10 08:01:20,643 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-01-10 03:02:12] 2026-01-10 08:01:20,813 | INFO     | sufficient remaining disk space (75511103488 B)
[2026-01-10 03:02:12] 2026-01-10 08:01:20,813 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 03:02:12] 2026-01-10 08:01:20,814 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 03:02:12] 2026-01-10 08:01:20,814 | INFO     | update_server=False
[2026-01-10 03:02:12] 2026-01-10 08:01:20,814 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 03:02:12] 2026-01-10 08:01:20,816 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 03:02:12] 2026-01-10 08:01:20,976 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 03:02:12] 2026-01-10 08:01:20,977 | INFO     | aborting loop
[2026-01-10 03:02:12] 2026-01-10 08:01:21,210 | INFO     | all payload control threads have been joined
[2026-01-10 03:02:12] 2026-01-10 08:01:21,272 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 03:02:12] 2026-01-10 08:01:21,613 | INFO     | all data control threads have been joined
[2026-01-10 03:02:12] 2026-01-10 08:01:21,820 | INFO     | [job] retrieve thread has finished
[2026-01-10 03:02:12] 2026-01-10 08:01:21,973 | INFO     | all job control threads have been joined
[2026-01-10 03:02:12] 2026-01-10 08:01:21,980 | INFO     | [job] validate thread has finished
[2026-01-10 03:02:12] 2026-01-10 08:01:21,981 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 03:02:12] 2026-01-10 08:01:22,002 | INFO     | [job] job monitor thread has finished
[2026-01-10 03:02:12] 2026-01-10 08:01:22,067 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 03:02:12] 2026-01-10 08:01:22,216 | INFO     | [payload] control thread has finished
[2026-01-10 03:02:12] 2026-01-10 08:01:22,274 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 03:02:12] 2026-01-10 08:01:22,304 | INFO     | [payload] validate_post thread has finished
[2026-01-10 03:02:12] 2026-01-10 08:01:22,494 | INFO     | [payload] failed_post thread has finished
[2026-01-10 03:02:12] 2026-01-10 08:01:22,619 | INFO     | [data] control thread has finished
[2026-01-10 03:02:12] 2026-01-10 08:01:22,823 | INFO     | [data] copytool_in thread has finished
[2026-01-10 03:02:12] 2026-01-10 08:01:22,849 | INFO     | [data] copytool_out thread has finished
[2026-01-10 03:02:12] 2026-01-10 08:01:22,868 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 03:02:12] 2026-01-10 08:01:22,978 | INFO     | [job] control thread has finished
[2026-01-10 03:02:12] 2026-01-10 08:01:23,814 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 03:02:12] 2026-01-10 08:01:24,827 | INFO     | [job] queue monitor thread has finished
[2026-01-10 03:02:12] 2026-01-10 08:01:25,316 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 03:02:12] 2026-01-10 08:01:48,698 | INFO     | PID=3749464 has CPU usage=4.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 03:02:12] 2026-01-10 08:01:48,698 | INFO     | .. there are 42 such processes running
[2026-01-10 03:02:12] 2026-01-10 08:01:48,719 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 03:02:12] 2026-01-10 08:01:48,720 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 03:02:12] 2026-01-10 08:01:48,720 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 03:02:12] 2026-01-10 08:02:03,794 | INFO     | [monitor] cgroup control has ended
[2026-01-10 03:02:12] 2026-01-10 08:02:05,157 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140213882419008)>', '<ExcThread(monitor, started 140213074511616)>']
[2026-01-10 03:02:12] 2026-01-10 08:02:05,868 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 03:02:12] 2026-01-10 08:02:05,869 | INFO     | [monitor] control thread has ended
[2026-01-10 03:02:12] 2026-01-10 08:02:10,221 | INFO     | all workflow threads have been joined
[2026-01-10 03:02:12] 2026-01-10 08:02:10,222 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 03:02:12] 2026-01-10 08:02:10,222 | INFO     | traces error code: 0
[2026-01-10 03:02:12] 2026-01-10 08:02:10,222 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 03:02:12] 2026-01-10 08:02:10,993 [wrapper] ==== pilot stdout END ====
[2026-01-10 03:02:12] 2026-01-10 08:02:10,997 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 03:02:12] 2026-01-10 08:02:11,000 [wrapper] pilotpid: 3749464
[2026-01-10 03:02:12] 2026-01-10 08:02:11,069 [wrapper] Pilot exit status: 0
[2026-01-10 03:02:12] 2026-01-10 08:02:11,221 [wrapper] pandaids: 6963148395
[2026-01-10 03:02:12] 2026-01-10 08:02:11,441 [wrapper] cleanup supervisor_pilot 4168799 3749465
[2026-01-10 03:02:12] 2026-01-10 08:02:11,463 [wrapper] Test setup, not cleaning
[2026-01-10 03:02:12] 2026-01-10 08:02:11,513 [wrapper] apfmon messages muted
[2026-01-10 03:02:12] 2026-01-10 08:02:11,561 [wrapper] ==== wrapper stdout END ====
[2026-01-10 03:02:12] 2026-01-10 08:02:11,606 [wrapper] ==== wrapper stderr END ====
[2026-01-10 03:02:12]  *** Error codes and diagnostics ***
[2026-01-10 03:02:12]     "exeErrorCode": 0,
[2026-01-10 03:02:12]     "exeErrorDiag": "",
[2026-01-10 03:02:12]     "pilotErrorCode": 0,
[2026-01-10 03:02:12]     "pilotErrorDiag": "",
[2026-01-10 03:02:12]  *** Listing of results directory ***
[2026-01-10 03:02:12] total 459684
[2026-01-10 03:02:12] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 11:02 queuedata.json
[2026-01-10 03:02:12] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 11:02 pilot3.tar.gz
[2026-01-10 03:02:12] -rwx------. 1 boincer umatlas     36322 Jan  8 11:03 runpilot2-wrapper.sh
[2026-01-10 03:02:12] -rw-r--r--. 1 boincer umatlas       100 Jan  9 00:04 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 03:02:12] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 00:04 run_atlas
[2026-01-10 03:02:12] -rw-r--r--. 1 boincer umatlas       105 Jan  9 00:04 job.xml
[2026-01-10 03:02:12] -rw-r--r--. 2 boincer umatlas 226069866 Jan  9 00:04 EVNT.47898824._001107.pool.root.1
[2026-01-10 03:02:12] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 00:04 start_atlas.sh
[2026-01-10 03:02:12] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 00:04 shared
[2026-01-10 03:02:12] -rw-r--r--. 2 boincer umatlas    592399 Jan  9 00:04 input.tar.gz
[2026-01-10 03:02:12] -rw-r--r--. 1 boincer umatlas         0 Jan  9 00:04 boinc_lockfile
[2026-01-10 03:02:12] -rw-r--r--. 1 boincer umatlas      2519 Jan  9 00:04 pandaJob.out
[2026-01-10 03:02:12] -rw-------. 1 boincer umatlas        57 Jan  9 00:04 setup.sh.local
[2026-01-10 03:02:12] -rw-------. 1 boincer umatlas    989771 Jan  9 00:07 agis_schedconf.cvmfs.json
[2026-01-10 03:02:12] drwx------. 5 boincer umatlas      4096 Jan  9 00:07 pilot3
[2026-01-10 03:02:12] -rw-r--r--. 1 boincer umatlas      6658 Jan 10 02:56 init_data.xml
[2026-01-10 03:02:12] -rw-------. 1 boincer umatlas 219259913 Jan 10 02:56 HITS.47898826._028066.pool.root.1
[2026-01-10 03:02:12] -rw-r--r--. 1 boincer umatlas       531 Jan 10 02:56 boinc_task_state.xml
[2026-01-10 03:02:12] -rw-------. 1 boincer umatlas      1058 Jan 10 02:59 memory_monitor_summary.json
[2026-01-10 03:02:12] -rw-------. 1 boincer umatlas   1516240 Jan 10 03:00 agis_ddmendpoints.agis.ALL.json
[2026-01-10 03:02:12] -rw-------. 1 boincer umatlas   1324640 Jan 10 03:00 log.47898826._028066.job.log.tgz.1
[2026-01-10 03:02:12] -rw-------. 1 boincer umatlas      7849 Jan 10 03:01 heartbeat.json
[2026-01-10 03:02:12] -rw-------. 1 boincer umatlas        95 Jan 10 03:01 pilot_heartbeat.json
[2026-01-10 03:02:12] -rw-r--r--. 1 boincer umatlas      8192 Jan 10 03:02 boinc_mmap_file
[2026-01-10 03:02:12] -rw-r--r--. 1 boincer umatlas        28 Jan 10 03:02 wrapper_checkpoint.txt
[2026-01-10 03:02:12] -rw-------. 1 boincer umatlas      4824 Jan 10 03:02 pilotlog.txt
[2026-01-10 03:02:12] -rw-------. 1 boincer umatlas   9410033 Jan 10 03:02 log.47898826._028066.job.log.1
[2026-01-10 03:02:12] -rw-------. 1 boincer umatlas       357 Jan 10 03:02 output.list
[2026-01-10 03:02:12] -rw-r--r--. 1 boincer umatlas       620 Jan 10 03:02 runtime_log
[2026-01-10 03:02:12] -rw-------. 1 boincer umatlas  10752000 Jan 10 03:02 result.tar.gz
[2026-01-10 03:02:12] -rw-r--r--. 1 boincer umatlas      9328 Jan 10 03:02 runtime_log.err
[2026-01-10 03:02:12] -rw-------. 1 boincer umatlas       661 Jan 10 03:02 khOLDm4e7x8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmstkKDmOyBHBn.diag
[2026-01-10 03:02:12] -rw-r--r--. 1 boincer umatlas     21069 Jan 10 03:02 stderr.txt
[2026-01-10 03:02:12] HITS file was successfully produced:
[2026-01-10 03:02:12] -rw-------. 1 boincer umatlas 219259913 Jan 10 02:56 shared/HITS.pool.root.1
[2026-01-10 03:02:12]  *** Contents of shared directory: ***
[2026-01-10 03:02:12] total 446000
[2026-01-10 03:02:12] -rw-r--r--. 2 boincer umatlas 226069866 Jan  9 00:04 ATLAS.root_0
[2026-01-10 03:02:12] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 00:04 start_atlas.sh
[2026-01-10 03:02:12] -rw-r--r--. 2 boincer umatlas    592399 Jan  9 00:04 input.tar.gz
[2026-01-10 03:02:12] -rw-------. 1 boincer umatlas 219259913 Jan 10 02:56 HITS.pool.root.1
[2026-01-10 03:02:12] -rw-------. 1 boincer umatlas  10752000 Jan 10 03:02 result.tar.gz
03:02:14 (3733454): run_atlas exited; CPU time 77271.882576
03:02:14 (3733454): called boinc_finish(0)

</stderr_txt>
]]>

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