Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
23:00:06 (2610683): wrapper (7.7.26015): starting
23:00:06 (2610683): wrapper: running run_atlas (--nthreads 8)
[2026-01-08 23:00:06] Arguments: --nthreads 8
[2026-01-08 23:00:06] Threads: 8
[2026-01-08 23:00:06] Checking for CVMFS
[2026-01-08 23:00:07] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 23:00:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 23:00:07] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 23:00:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 23:00:08] 2.13.3.0 5924 21001 185880 154929 1 311 35802489 39288833 8555 16776704 0 9092669 99.557 15507798 42295 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-08 23:00:08] CVMFS is ok
[2026-01-08 23:00:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-08 23:00:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-08 23:00:08] Further information can be found at the LHC@home message board.
[2026-01-08 23:00:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 23:00:08] Checking for apptainer binary...
[2026-01-08 23:00:08] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-08 23:00:08] Running /usr/bin/apptainer --version
[2026-01-08 23:00:08] apptainer version 1.4.5-2.el9
[2026-01-08 23:00:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 23:00:09] c-210-3.aglt2.org
[2026-01-08 23:00:09] apptainer works
[2026-01-08 23:00:09] Set ATHENA_PROC_NUMBER=8
[2026-01-08 23:00:09] Set ATHENA_CORE_NUMBER=8
[2026-01-08 23:00:09] Starting ATLAS job with PandaID=6963148282
[2026-01-08 23:00:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 07:13:18]  *** The last 200 lines of the pilot log: ***
[2026-01-09 07:13:18] 2026-01-09 12:12:11,240 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 07:13:18] 2026-01-09 12:12:11,599 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 07:13:18] 2026-01-09 12:12:11,651 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2599.9322249999996
[2026-01-09 07:13:18] 2026-01-09 12:12:11,746 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6963148282/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 07:13:18] 2026-01-09 12:12:11,747 | INFO     | extracted standard info from prmon json
[2026-01-09 07:13:18] 2026-01-09 12:12:11,747 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 07:13:18] 2026-01-09 12:12:11,747 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 07:13:18] 2026-01-09 12:12:11,762 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 07:13:18] 2026-01-09 12:12:11,762 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 07:13:18] 2026-01-09 12:12:11,832 | INFO     | fitting pss+swap vs Time
[2026-01-09 07:13:18] 2026-01-09 12:12:11,834 | INFO     | sum of square deviations: 34512366214.03322
[2026-01-09 07:13:18] 2026-01-09 12:12:11,989 | INFO     | sum of deviations: 79730985870.8088
[2026-01-09 07:13:18] 2026-01-09 12:12:11,989 | INFO     | mean x: 1767946022.7962577
[2026-01-09 07:13:18] 2026-01-09 12:12:11,989 | INFO     | mean y: 2499892.6715176716
[2026-01-09 07:13:18] 2026-01-09 12:12:11,990 | INFO     | intersect: -4081835515.9683185
[2026-01-09 07:13:18] 2026-01-09 12:12:11,990 | INFO     | chi2: 3.5441895295954415
[2026-01-09 07:13:18] 2026-01-09 12:12:11,991 | INFO     | sum of square deviations: 33447574227.602795
[2026-01-09 07:13:18] 2026-01-09 12:12:12,064 | INFO     | sum of deviations: 139625656825.82343
[2026-01-09 07:13:18] 2026-01-09 12:12:12,064 | INFO     | mean x: 1767945870.3088236
[2026-01-09 07:13:18] 2026-01-09 12:12:12,065 | INFO     | mean y: 2508415.899159664
[2026-01-09 07:13:18] 2026-01-09 12:12:12,065 | INFO     | intersect: -7377715982.277278
[2026-01-09 07:13:18] 2026-01-09 12:12:12,065 | INFO     | chi2: 2.1527820188589506
[2026-01-09 07:13:18] 2026-01-09 12:12:12,066 | INFO     | current chi2=2.1527820188589506 (change=39.258834752421265 %)
[2026-01-09 07:13:18] 2026-01-09 12:12:12,066 | INFO     | sum of square deviations: 32404717613.418232
[2026-01-09 07:13:18] 2026-01-09 12:12:12,147 | INFO     | sum of deviations: 137605148895.8344
[2026-01-09 07:13:18] 2026-01-09 12:12:12,147 | INFO     | mean x: 1767945717.8067942
[2026-01-09 07:13:18] 2026-01-09 12:12:12,147 | INFO     | mean y: 2508120.426751592
[2026-01-09 07:13:18] 2026-01-09 12:12:12,148 | INFO     | intersect: -7504992381.223027
[2026-01-09 07:13:18] 2026-01-09 12:12:12,148 | INFO     | chi2: 2.153052090872652
[2026-01-09 07:13:18] 2026-01-09 12:12:12,148 | INFO     | current chi2=2.153052090872652 (change=-0.012545255921654551 %)
[2026-01-09 07:13:18] 2026-01-09 12:12:12,148 | INFO     | right removable region: 470
[2026-01-09 07:13:18] 2026-01-09 12:12:12,149 | INFO     | sum of square deviations: 33447016246.176468
[2026-01-09 07:13:18] 2026-01-09 12:12:12,230 | INFO     | sum of deviations: -24830240052.676468
[2026-01-09 07:13:18] 2026-01-09 12:12:12,230 | INFO     | mean x: 1767946175.3235295
[2026-01-09 07:13:18] 2026-01-09 12:12:12,231 | INFO     | mean y: 2514817.9264705884
[2026-01-09 07:13:18] 2026-01-09 12:12:12,231 | INFO     | intersect: 1314994460.6662853
[2026-01-09 07:13:18] 2026-01-09 12:12:12,232 | INFO     | chi2: 1.4825732507800538
[2026-01-09 07:13:18] 2026-01-09 12:12:12,232 | INFO     | current chi2=1.4825732507800538 (change=58.16890608134929 %)
[2026-01-09 07:13:18] 2026-01-09 12:12:12,282 | INFO     | sum of square deviations: 32403979727.736813
[2026-01-09 07:13:18] 2026-01-09 12:12:12,339 | INFO     | sum of deviations: -19423439104.864136
[2026-01-09 07:13:18] 2026-01-09 12:12:12,340 | INFO     | mean x: 1767946327.8386412
[2026-01-09 07:13:18] 2026-01-09 12:12:12,340 | INFO     | mean y: 2514014.2123142253
[2026-01-09 07:13:18] 2026-01-09 12:12:12,340 | INFO     | intersect: 1062247976.7677954
[2026-01-09 07:13:18] 2026-01-09 12:12:12,341 | INFO     | chi2: 1.4440935783091269
[2026-01-09 07:13:18] 2026-01-09 12:12:12,341 | INFO     | current chi2=1.4440935783091269 (change=2.5954651785792606 %)
[2026-01-09 07:13:18] 2026-01-09 12:12:12,341 | INFO     | left removable region: 20
[2026-01-09 07:13:18] 2026-01-09 12:12:12,389 | INFO     | sum of square deviations: 28260339734.01991
[2026-01-09 07:13:18] 2026-01-09 12:12:12,404 | INFO     | sum of deviations: 34783406294.240005
[2026-01-09 07:13:18] 2026-01-09 12:12:12,405 | INFO     | mean x: 1767946297.38
[2026-01-09 07:13:18] 2026-01-09 12:12:12,405 | INFO     | mean y: 2523397.56
[2026-01-09 07:13:18] 2026-01-09 12:12:12,405 | INFO     | intersect: -2173501198.9928026
[2026-01-09 07:13:18] 2026-01-09 12:12:12,406 | INFO     | chi2: 0.006296491266102043
[2026-01-09 07:13:18] 2026-01-09 12:12:12,406 | INFO     | current memory leak: 1.23 B/s (using 450 data points, chi2=0.01)
[2026-01-09 07:13:18] 2026-01-09 12:12:12,419 | INFO     | could have reported an average CPU frequency of 2599 MHz (19 samples)
[2026-01-09 07:13:18] 2026-01-09 12:12:12,419 | INFO     | ..............................
[2026-01-09 07:13:18] 2026-01-09 12:12:12,419 | INFO     | . Timing measurements:
[2026-01-09 07:13:18] 2026-01-09 12:12:12,419 | INFO     | . get job = 0 s
[2026-01-09 07:13:18] 2026-01-09 12:12:12,419 | INFO     | . initial setup = 4 s
[2026-01-09 07:13:18] 2026-01-09 12:12:12,420 | INFO     | . payload setup = 27 s
[2026-01-09 07:13:18] 2026-01-09 12:12:12,420 | INFO     | . stage-in = 0 s
[2026-01-09 07:13:18] 2026-01-09 12:12:12,420 | INFO     | . payload execution = 29305 s
[2026-01-09 07:13:18] 2026-01-09 12:12:12,420 | INFO     | . stage-out = 9 s
[2026-01-09 07:13:18] 2026-01-09 12:12:12,420 | INFO     | . log creation = 1 s
[2026-01-09 07:13:18] 2026-01-09 12:12:12,420 | INFO     | ..............................
[2026-01-09 07:13:18] 2026-01-09 12:12:12,802 | INFO     | time since job start (29457s) is within the limit (349056.0s)
[2026-01-09 07:13:18] 2026-01-09 12:12:13,732 | INFO     | 
[2026-01-09 07:13:18] 2026-01-09 12:12:13,732 | INFO     | job summary report
[2026-01-09 07:13:18] 2026-01-09 12:12:13,732 | INFO     | --------------------------------------------------
[2026-01-09 07:13:18] 2026-01-09 12:12:13,732 | INFO     | PanDA job id: 6963148282
[2026-01-09 07:13:18] 2026-01-09 12:12:13,732 | INFO     | task id: 47898826
[2026-01-09 07:13:18] 2026-01-09 12:12:13,732 | INFO     | errors: (none)
[2026-01-09 07:13:18] 2026-01-09 12:12:13,732 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 07:13:18] 2026-01-09 12:12:13,733 | INFO     | pilot state: finished 
[2026-01-09 07:13:18] 2026-01-09 12:12:13,733 | INFO     | transexitcode: 0
[2026-01-09 07:13:18] 2026-01-09 12:12:13,733 | INFO     | exeerrorcode: 0
[2026-01-09 07:13:18] 2026-01-09 12:12:13,733 | INFO     | exeerrordiag: 
[2026-01-09 07:13:18] 2026-01-09 12:12:13,733 | INFO     | exitcode: 0
[2026-01-09 07:13:18] 2026-01-09 12:12:13,733 | INFO     | exitmsg: OK
[2026-01-09 07:13:18] 2026-01-09 12:12:13,733 | INFO     | cpuconsumptiontime: 67863 s
[2026-01-09 07:13:18] 2026-01-09 12:12:13,733 | INFO     | nevents: 400
[2026-01-09 07:13:18] 2026-01-09 12:12:13,733 | INFO     | neventsw: 0
[2026-01-09 07:13:18] 2026-01-09 12:12:13,733 | INFO     | pid: 2625635
[2026-01-09 07:13:18] 2026-01-09 12:12:13,733 | INFO     | pgrp: 2625635
[2026-01-09 07:13:18] 2026-01-09 12:12:13,734 | INFO     | corecount: 8
[2026-01-09 07:13:18] 2026-01-09 12:12:13,734 | INFO     | event service: False
[2026-01-09 07:13:18] 2026-01-09 12:12:13,734 | INFO     | sizes: {0: 2283142, 1: 2283827, 2: 2283827, 3: 2284026, 4: 2284082, 15: 2284082, 26: 2284238, 33: 2284528, 37: 2284584, 29340: 2321627, 29341: 2321626, 29352: 2331
[2026-01-09 07:13:18] 2026-01-09 12:12:13,734 | INFO     | --------------------------------------------------
[2026-01-09 07:13:18] 2026-01-09 12:12:13,734 | INFO     | 
[2026-01-09 07:13:18] 2026-01-09 12:12:13,734 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-09 07:13:18] 2026-01-09 12:12:14,085 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 07:13:18] 2026-01-09 12:12:14,085 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 07:13:18] 2026-01-09 12:12:14,085 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 07:13:18] 2026-01-09 12:12:14,085 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 07:13:18] 2026-01-09 12:12:14,086 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 07:13:18] 2026-01-09 12:12:14,086 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 07:13:18] 2026-01-09 12:12:14,086 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 07:13:18] 2026-01-09 12:12:14,086 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 07:13:18] 2026-01-09 12:12:14,086 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 07:13:18] 2026-01-09 12:12:14,101 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 07:13:18] 2026-01-09 12:12:14,101 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 07:13:18] 2026-01-09 12:12:14,101 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 07:13:18] 2026-01-09 12:12:14,101 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 07:13:18] 2026-01-09 12:12:14,101 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 07:13:18] 2026-01-09 12:12:14,101 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 07:13:18] 2026-01-09 12:12:14,101 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 07:13:18] 2026-01-09 12:12:14,101 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 07:13:18] 2026-01-09 12:12:14,101 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 07:13:18] 2026-01-09 12:12:14,102 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 07:13:18] 2026-01-09 12:12:14,102 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 07:13:18] 2026-01-09 12:12:14,102 | INFO     | job 6963148282 has completed (purged errors)
[2026-01-09 07:13:18] 2026-01-09 12:12:14,102 | INFO     | overall cleanup function is called
[2026-01-09 07:13:18] 2026-01-09 12:12:15,121 | INFO     | --- collectZombieJob: --- 10, [2625635]
[2026-01-09 07:13:18] 2026-01-09 12:12:15,121 | INFO     | zombie collector waiting for pid 2625635
[2026-01-09 07:13:18] 2026-01-09 12:12:15,121 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 07:13:18] 2026-01-09 12:12:15,121 | INFO     | collected zombie processes
[2026-01-09 07:13:18] 2026-01-09 12:12:15,121 | INFO     | will attempt to kill all subprocesses of pid=2625635
[2026-01-09 07:13:18] 2026-01-09 12:12:15,405 | INFO     | process IDs to be killed: [2625635] (in reverse order)
[2026-01-09 07:13:18] 2026-01-09 12:12:15,590 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 07:13:18] 2026-01-09 12:12:15,591 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 07:13:18] 2026-01-09 12:12:15,635 | INFO     | did not find any defunct processes belonging to 2625635
[2026-01-09 07:13:18] 2026-01-09 12:12:15,643 | INFO     | did not find any defunct processes belonging to 2625635
[2026-01-09 07:13:18] 2026-01-09 12:12:15,644 | INFO     | ready for new job
[2026-01-09 07:13:18] 2026-01-09 12:12:15,644 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 07:13:18] 2026-01-09 12:12:15,647 | INFO     | ***************************************
[2026-01-09 07:13:18] 2026-01-09 12:12:15,647 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 07:13:18] 2026-01-09 12:12:15,647 | INFO     | ***************************************
[2026-01-09 07:13:18] 2026-01-09 12:12:15,647 | INFO     | 
[2026-01-09 07:13:18] 2026-01-09 12:12:15,649 | INFO     | architecture information:
[2026-01-09 07:13:18] 2026-01-09 12:12:15,649 | INFO     | executing command: cat /etc/os-release
[2026-01-09 07:13:18] 2026-01-09 12:12:15,823 | INFO     | cat /etc/os-release:
[2026-01-09 07:13:18] NAME="CentOS Linux"
[2026-01-09 07:13:18] VERSION="7 (Core)"
[2026-01-09 07:13:18] ID="centos"
[2026-01-09 07:13:18] ID_LIKE="rhel fedora"
[2026-01-09 07:13:18] VERSION_ID="7"
[2026-01-09 07:13:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 07:13:18] ANSI_COLOR="0;31"
[2026-01-09 07:13:18] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 07:13:18] HOME_URL="https://www.centos.org/"
[2026-01-09 07:13:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 07:13:18] 
[2026-01-09 07:13:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 07:13:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 07:13:18] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 07:13:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 07:13:18] 
[2026-01-09 07:13:18] 2026-01-09 12:12:15,823 | INFO     | ***************************************
[2026-01-09 07:13:18] 2026-01-09 12:12:16,327 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-09 07:13:18] 2026-01-09 12:12:16,490 | INFO     | sufficient remaining disk space (52387905536 B)
[2026-01-09 07:13:18] 2026-01-09 12:12:16,490 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 07:13:18] 2026-01-09 12:12:16,508 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 07:13:18] 2026-01-09 12:12:16,508 | INFO     | update_server=False
[2026-01-09 07:13:18] 2026-01-09 12:12:16,508 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 07:13:18] 2026-01-09 12:12:16,511 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 07:13:18] 2026-01-09 12:12:16,672 | INFO     | all data control threads have been joined
[2026-01-09 07:13:18] 2026-01-09 12:12:16,895 | INFO     | all job control threads have been joined
[2026-01-09 07:13:18] 2026-01-09 12:12:17,451 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 07:13:18] 2026-01-09 12:12:17,451 | INFO     | aborting loop
[2026-01-09 07:13:18] 2026-01-09 12:12:17,514 | INFO     | [job] retrieve thread has finished
[2026-01-09 07:13:18] 2026-01-09 12:12:17,567 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 07:13:18] 2026-01-09 12:12:17,677 | INFO     | [data] control thread has finished
[2026-01-09 07:13:18] 2026-01-09 12:12:17,833 | INFO     | all payload control threads have been joined
[2026-01-09 07:13:18] 2026-01-09 12:12:17,901 | INFO     | [job] control thread has finished
[2026-01-09 07:13:18] 2026-01-09 12:12:18,077 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 07:13:18] 2026-01-09 12:12:18,167 | INFO     | [data] copytool_in thread has finished
[2026-01-09 07:13:18] 2026-01-09 12:12:18,172 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 07:13:18] 2026-01-09 12:12:18,174 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 07:13:18] 2026-01-09 12:12:18,314 | INFO     | [payload] validate_post thread has finished
[2026-01-09 07:13:18] 2026-01-09 12:12:18,428 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 07:13:18] 2026-01-09 12:12:18,457 | INFO     | [job] job monitor thread has finished
[2026-01-09 07:13:18] 2026-01-09 12:12:18,519 | INFO     | [data] copytool_out thread has finished
[2026-01-09 07:13:18] 2026-01-09 12:12:18,838 | INFO     | [payload] control thread has finished
[2026-01-09 07:13:18] 2026-01-09 12:12:18,916 | INFO     | [job] validate thread has finished
[2026-01-09 07:13:18] 2026-01-09 12:12:18,927 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 07:13:18] 2026-01-09 12:12:19,013 | INFO     | [payload] failed_post thread has finished
[2026-01-09 07:13:18] 2026-01-09 12:12:19,434 | INFO     | [job] queue monitor thread has finished
[2026-01-09 07:13:18] 2026-01-09 12:12:21,589 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 07:13:18] 2026-01-09 12:12:46,625 | INFO     | PID=2618350 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 07:13:18] 2026-01-09 12:12:46,625 | INFO     | .. there are 8 such processes running
[2026-01-09 07:13:18] 2026-01-09 12:12:46,627 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 07:13:18] 2026-01-09 12:12:46,627 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 07:13:18] 2026-01-09 12:12:46,627 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 07:13:18] 2026-01-09 12:13:10,135 | INFO     | [monitor] cgroup control has ended
[2026-01-09 07:13:18] 2026-01-09 12:13:11,123 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140187675440960)>', '<ExcThread(monitor, started 140187304707840)>']
[2026-01-09 07:13:18] 2026-01-09 12:13:11,820 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 07:13:18] 2026-01-09 12:13:11,821 | INFO     | [monitor] control thread has ended
[2026-01-09 07:13:18] 2026-01-09 12:13:16,149 | INFO     | all workflow threads have been joined
[2026-01-09 07:13:18] 2026-01-09 12:13:16,149 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 07:13:18] 2026-01-09 12:13:16,149 | INFO     | traces error code: 0
[2026-01-09 07:13:18] 2026-01-09 12:13:16,149 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 07:13:18] 2026-01-09 12:13:16,302 [wrapper] ==== pilot stdout END ====
[2026-01-09 07:13:18] 2026-01-09 12:13:16,305 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 07:13:18] 2026-01-09 12:13:16,308 [wrapper] pilotpid: 2618350
[2026-01-09 07:13:18] 2026-01-09 12:13:16,311 [wrapper] Pilot exit status: 0
[2026-01-09 07:13:18] 2026-01-09 12:13:16,687 [wrapper] pandaids: 6963148282
[2026-01-09 07:13:18] 2026-01-09 12:13:17,220 [wrapper] cleanup supervisor_pilot 3371215 2618352
[2026-01-09 07:13:18] 2026-01-09 12:13:17,288 [wrapper] Test setup, not cleaning
[2026-01-09 07:13:18] 2026-01-09 12:13:17,328 [wrapper] apfmon messages muted
[2026-01-09 07:13:18] 2026-01-09 12:13:17,373 [wrapper] ==== wrapper stdout END ====
[2026-01-09 07:13:18] 2026-01-09 12:13:17,651 [wrapper] ==== wrapper stderr END ====
[2026-01-09 07:13:18]  *** Error codes and diagnostics ***
[2026-01-09 07:13:18]     "exeErrorCode": 0,
[2026-01-09 07:13:18]     "exeErrorDiag": "",
[2026-01-09 07:13:18]     "pilotErrorCode": 0,
[2026-01-09 07:13:18]     "pilotErrorDiag": "",
[2026-01-09 07:13:18]  *** Listing of results directory ***
[2026-01-09 07:13:18] total 450320
[2026-01-09 07:13:18] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 11:02 queuedata.json
[2026-01-09 07:13:18] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 11:02 pilot3.tar.gz
[2026-01-09 07:13:18] -rwx------. 1 boincer umatlas     36322 Jan  8 11:03 runpilot2-wrapper.sh
[2026-01-09 07:13:18] -rw-r--r--. 1 boincer umatlas       100 Jan  8 23:00 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 07:13:18] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  8 23:00 run_atlas
[2026-01-09 07:13:18] -rw-r--r--. 1 boincer umatlas       105 Jan  8 23:00 job.xml
[2026-01-09 07:13:18] -rw-r--r--. 2 boincer umatlas 224569466 Jan  8 23:00 EVNT.47898824._001103.pool.root.1
[2026-01-09 07:13:18] -rw-r--r--. 2 boincer umatlas     15847 Jan  8 23:00 start_atlas.sh
[2026-01-09 07:13:18] drwxrwx--x. 2 boincer umatlas      4096 Jan  8 23:00 shared
[2026-01-09 07:13:18] -rw-r--r--. 2 boincer umatlas    592396 Jan  8 23:00 input.tar.gz
[2026-01-09 07:13:18] -rw-r--r--. 1 boincer umatlas         0 Jan  8 23:00 boinc_lockfile
[2026-01-09 07:13:18] -rw-r--r--. 1 boincer umatlas      2519 Jan  8 23:00 pandaJob.out
[2026-01-09 07:13:18] -rw-------. 1 boincer umatlas        57 Jan  8 23:00 setup.sh.local
[2026-01-09 07:13:18] -rw-------. 1 boincer umatlas    989771 Jan  8 23:01 agis_schedconf.cvmfs.json
[2026-01-09 07:13:18] drwx------. 5 boincer umatlas      4096 Jan  8 23:01 pilot3
[2026-01-09 07:13:18] -rw-------. 1 boincer umatlas 224059948 Jan  9 07:09 HITS.47898826._027953.pool.root.1
[2026-01-09 07:13:18] -rw-r--r--. 1 boincer umatlas       531 Jan  9 07:09 boinc_task_state.xml
[2026-01-09 07:13:18] -rw-------. 1 boincer umatlas      1036 Jan  9 07:11 memory_monitor_summary.json
[2026-01-09 07:13:18] -rw-------. 1 boincer umatlas   1516240 Jan  9 07:11 agis_ddmendpoints.agis.ALL.json
[2026-01-09 07:13:18] -rw-------. 1 boincer umatlas    635496 Jan  9 07:11 log.47898826._027953.job.log.tgz.1
[2026-01-09 07:13:18] -rw-------. 1 boincer umatlas      7822 Jan  9 07:12 heartbeat.json
[2026-01-09 07:13:18] -rw-r--r--. 1 boincer umatlas      6657 Jan  9 07:12 init_data.xml
[2026-01-09 07:13:18] -rw-------. 1 boincer umatlas        95 Jan  9 07:12 pilot_heartbeat.json
[2026-01-09 07:13:18] -rw-r--r--. 1 boincer umatlas        28 Jan  9 07:13 wrapper_checkpoint.txt
[2026-01-09 07:13:18] -rw-r--r--. 1 boincer umatlas      8192 Jan  9 07:13 boinc_mmap_file
[2026-01-09 07:13:18] -rw-------. 1 boincer umatlas      4823 Jan  9 07:13 pilotlog.txt
[2026-01-09 07:13:18] -rw-------. 1 boincer umatlas   3651323 Jan  9 07:13 log.47898826._027953.job.log.1
[2026-01-09 07:13:18] -rw-------. 1 boincer umatlas       357 Jan  9 07:13 output.list
[2026-01-09 07:13:18] -rw-r--r--. 1 boincer umatlas       620 Jan  9 07:13 runtime_log
[2026-01-09 07:13:18] -rw-------. 1 boincer umatlas   4311040 Jan  9 07:13 result.tar.gz
[2026-01-09 07:13:18] -rw-------. 1 boincer umatlas       656 Jan  9 07:13 zOKLDm4e7x8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmHgfKDm1ZOZBn.diag
[2026-01-09 07:13:18] -rw-r--r--. 1 boincer umatlas      9338 Jan  9 07:13 runtime_log.err
[2026-01-09 07:13:18] -rw-r--r--. 1 boincer umatlas     21240 Jan  9 07:13 stderr.txt
[2026-01-09 07:13:18] HITS file was successfully produced:
[2026-01-09 07:13:18] -rw-------. 1 boincer umatlas 224059948 Jan  9 07:09 shared/HITS.pool.root.1
[2026-01-09 07:13:18]  *** Contents of shared directory: ***
[2026-01-09 07:13:18] total 442932
[2026-01-09 07:13:18] -rw-r--r--. 2 boincer umatlas 224569466 Jan  8 23:00 ATLAS.root_0
[2026-01-09 07:13:18] -rw-r--r--. 2 boincer umatlas     15847 Jan  8 23:00 start_atlas.sh
[2026-01-09 07:13:18] -rw-r--r--. 2 boincer umatlas    592396 Jan  8 23:00 input.tar.gz
[2026-01-09 07:13:18] -rw-------. 1 boincer umatlas 224059948 Jan  9 07:09 HITS.pool.root.1
[2026-01-09 07:13:18] -rw-------. 1 boincer umatlas   4311040 Jan  9 07:13 result.tar.gz
07:13:19 (2610683): run_atlas exited; CPU time 68436.774178
07:13:19 (2610683): called boinc_finish(0)

</stderr_txt>
]]>

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