Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:46:12 (17462): wrapper (7.7.26015): starting
07:46:12 (17462): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 07:46:12] Arguments: --nthreads 8
[2026-01-09 07:46:12] Threads: 8
[2026-01-09 07:46:12] Checking for CVMFS
[2026-01-09 07:46:12] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 07:46:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 07:46:12] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 07:46:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 07:46:12] 2.11.2.0 9379 17669 95284 154934 3 57 20271742 25165824 0 130560 0 2064442 99.333 6690443 1915 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-09 07:46:12] CVMFS is ok
[2026-01-09 07:46:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 07:46:12] Checking for apptainer binary...
[2026-01-09 07:46:12] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 07:46:12] Running /usr/bin/apptainer --version
[2026-01-09 07:46:12] apptainer version 1.3.2-1.el7
[2026-01-09 07:46:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 07:46:14] cg-vwn452.simple-grid.lan
[2026-01-09 07:46:14] apptainer works
[2026-01-09 07:46:14] Set ATHENA_PROC_NUMBER=8
[2026-01-09 07:46:14] Set ATHENA_CORE_NUMBER=8
[2026-01-09 07:46:14] Starting ATLAS job with PandaID=6963148397
[2026-01-09 07:46:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 10:32:50]  *** The last 200 lines of the pilot log: ***
[2026-01-09 10:32:50] 2026-01-09 09:31:54,567 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 10:32:50] 2026-01-09 09:31:55,802 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 10:32:50] 2026-01-09 09:31:55,803 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2026-01-09 10:32:50] 2026-01-09 09:31:55,805 | INFO     | using path: /var/lib/boinc/slots/6/PanDA_Pilot-6963148397/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 10:32:50] 2026-01-09 09:31:55,805 | INFO     | extracted standard info from prmon json
[2026-01-09 10:32:50] 2026-01-09 09:31:55,806 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 10:32:50] 2026-01-09 09:31:55,806 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 10:32:50] 2026-01-09 09:31:55,806 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 10:32:50] 2026-01-09 09:31:55,806 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 10:32:50] 2026-01-09 09:31:55,810 | INFO     | fitting pss+swap vs Time
[2026-01-09 10:32:50] 2026-01-09 09:31:55,810 | INFO     | sum of square deviations: 1342841922.0
[2026-01-09 10:32:50] 2026-01-09 09:31:55,812 | INFO     | sum of deviations: 6866553206.000004
[2026-01-09 10:32:50] 2026-01-09 09:31:55,812 | INFO     | mean x: 1767946159.0
[2026-01-09 10:32:50] 2026-01-09 09:31:55,812 | INFO     | mean y: 2471286.226993865
[2026-01-09 10:32:50] 2026-01-09 09:31:55,812 | INFO     | intersect: -9037830604.286104
[2026-01-09 10:32:50] 2026-01-09 09:31:55,812 | INFO     | chi2: 2.293983998633589
[2026-01-09 10:32:50] 2026-01-09 09:31:55,813 | INFO     | sum of square deviations: 1223016419.5
[2026-01-09 10:32:50] 2026-01-09 09:31:55,814 | INFO     | sum of deviations: 17104179912.0
[2026-01-09 10:32:50] 2026-01-09 09:31:55,814 | INFO     | mean x: 1767946006.5
[2026-01-09 10:32:50] 2026-01-09 09:31:55,814 | INFO     | mean y: 2483974.4683544305
[2026-01-09 10:32:50] 2026-01-09 09:31:55,814 | INFO     | intersect: -24722667779.61889
[2026-01-09 10:32:50] 2026-01-09 09:31:55,815 | INFO     | chi2: 1.528157621656627
[2026-01-09 10:32:50] 2026-01-09 09:31:55,815 | INFO     | current chi2=1.528157621656627 (change=33.38412026557841 %)
[2026-01-09 10:32:50] 2026-01-09 09:31:55,815 | INFO     | sum of square deviations: 1110539892.0
[2026-01-09 10:32:50] 2026-01-09 09:31:55,816 | INFO     | sum of deviations: 16385588627.0
[2026-01-09 10:32:50] 2026-01-09 09:31:55,816 | INFO     | mean x: 1767945854.0
[2026-01-09 10:32:50] 2026-01-09 09:31:55,817 | INFO     | mean y: 2483000.3006535945
[2026-01-09 10:32:50] 2026-01-09 09:31:55,817 | INFO     | intersect: -26082877541.123463
[2026-01-09 10:32:50] 2026-01-09 09:31:55,817 | INFO     | chi2: 1.5298067576449237
[2026-01-09 10:32:50] 2026-01-09 09:31:55,817 | INFO     | current chi2=1.5298067576449237 (change=-0.10791661572900177 %)
[2026-01-09 10:32:50] 2026-01-09 09:31:55,818 | INFO     | right removable region: 152
[2026-01-09 10:32:50] 2026-01-09 09:31:55,818 | INFO     | sum of square deviations: 1223016419.5
[2026-01-09 10:32:50] 2026-01-09 09:31:55,819 | INFO     | sum of deviations: -16865399132.999996
[2026-01-09 10:32:50] 2026-01-09 09:31:55,819 | INFO     | mean x: 1767946311.5
[2026-01-09 10:32:50] 2026-01-09 09:31:55,819 | INFO     | mean y: 2501041.974683544
[2026-01-09 10:32:50] 2026-01-09 09:31:55,819 | INFO     | intersect: 24382484592.279453
[2026-01-09 10:32:50] 2026-01-09 09:31:55,820 | INFO     | chi2: 0.8803916011560665
[2026-01-09 10:32:50] 2026-01-09 09:31:55,820 | INFO     | current chi2=0.8803916011560665 (change=61.62172004336248 %)
[2026-01-09 10:32:50] 2026-01-09 09:31:55,820 | INFO     | sum of square deviations: 1110539892.0
[2026-01-09 10:32:50] 2026-01-09 09:31:55,821 | INFO     | sum of deviations: -16431913125.0
[2026-01-09 10:32:50] 2026-01-09 09:31:55,822 | INFO     | mean x: 1767946464.0
[2026-01-09 10:32:50] 2026-01-09 09:31:55,822 | INFO     | mean y: 2500386.8235294116
[2026-01-09 10:32:50] 2026-01-09 09:31:55,822 | INFO     | intersect: 26161617150.995506
[2026-01-09 10:32:50] 2026-01-09 09:31:55,822 | INFO     | chi2: 0.8676316085499535
[2026-01-09 10:32:50] 2026-01-09 09:31:55,823 | INFO     | current chi2=0.8676316085499535 (change=1.4493541952646467 %)
[2026-01-09 10:32:50] 2026-01-09 09:31:55,823 | INFO     | left removable region: 20
[2026-01-09 10:32:50] 2026-01-09 09:31:55,823 | INFO     | sum of square deviations: 713140813.0
[2026-01-09 10:32:50] 2026-01-09 09:31:55,824 | INFO     | sum of deviations: 2661188714.5
[2026-01-09 10:32:50] 2026-01-09 09:31:55,824 | INFO     | mean x: 1767946433.5
[2026-01-09 10:32:50] 2026-01-09 09:31:55,824 | INFO     | mean y: 2499766.871212121
[2026-01-09 10:32:50] 2026-01-09 09:31:55,824 | INFO     | intersect: -6594849607.761656
[2026-01-09 10:32:50] 2026-01-09 09:31:55,825 | INFO     | chi2: 0.00044487413266097937
[2026-01-09 10:32:50] 2026-01-09 09:31:55,825 | INFO     | current memory leak: 3.73 B/s (using 132 data points, chi2=0.00)
[2026-01-09 10:32:50] 2026-01-09 09:31:55,826 | INFO     | could have reported an average CPU frequency of 1999 MHz (9 samples)
[2026-01-09 10:32:50] 2026-01-09 09:31:55,826 | INFO     | ..............................
[2026-01-09 10:32:50] 2026-01-09 09:31:55,826 | INFO     | . Timing measurements:
[2026-01-09 10:32:50] 2026-01-09 09:31:55,826 | INFO     | . get job = 0 s
[2026-01-09 10:32:50] 2026-01-09 09:31:55,826 | INFO     | . initial setup = 2 s
[2026-01-09 10:32:50] 2026-01-09 09:31:55,826 | INFO     | . payload setup = 7 s
[2026-01-09 10:32:50] 2026-01-09 09:31:55,826 | INFO     | . stage-in = 0 s
[2026-01-09 10:32:50] 2026-01-09 09:31:55,827 | INFO     | . payload execution = 9892 s
[2026-01-09 10:32:50] 2026-01-09 09:31:55,827 | INFO     | . stage-out = 1 s
[2026-01-09 10:32:50] 2026-01-09 09:31:55,827 | INFO     | . log creation = 0 s
[2026-01-09 10:32:50] 2026-01-09 09:31:55,827 | INFO     | ..............................
[2026-01-09 10:32:50] 2026-01-09 09:31:56,119 | INFO     | 
[2026-01-09 10:32:50] 2026-01-09 09:31:56,119 | INFO     | job summary report
[2026-01-09 10:32:50] 2026-01-09 09:31:56,119 | INFO     | --------------------------------------------------
[2026-01-09 10:32:50] 2026-01-09 09:31:56,119 | INFO     | PanDA job id: 6963148397
[2026-01-09 10:32:50] 2026-01-09 09:31:56,120 | INFO     | task id: 47898826
[2026-01-09 10:32:50] 2026-01-09 09:31:56,120 | INFO     | errors: (none)
[2026-01-09 10:32:50] 2026-01-09 09:31:56,120 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 10:32:50] 2026-01-09 09:31:56,120 | INFO     | pilot state: finished 
[2026-01-09 10:32:50] 2026-01-09 09:31:56,120 | INFO     | transexitcode: 0
[2026-01-09 10:32:50] 2026-01-09 09:31:56,120 | INFO     | exeerrorcode: 0
[2026-01-09 10:32:50] 2026-01-09 09:31:56,120 | INFO     | exeerrordiag: 
[2026-01-09 10:32:50] 2026-01-09 09:31:56,120 | INFO     | exitcode: 0
[2026-01-09 10:32:50] 2026-01-09 09:31:56,121 | INFO     | exitmsg: OK
[2026-01-09 10:32:50] 2026-01-09 09:31:56,121 | INFO     | cpuconsumptiontime: 74478 s
[2026-01-09 10:32:50] 2026-01-09 09:31:56,121 | INFO     | nevents: 400
[2026-01-09 10:32:50] 2026-01-09 09:31:56,121 | INFO     | neventsw: 0
[2026-01-09 10:32:50] 2026-01-09 09:31:56,121 | INFO     | pid: 27635
[2026-01-09 10:32:50] 2026-01-09 09:31:56,121 | INFO     | pgrp: 27635
[2026-01-09 10:32:50] 2026-01-09 09:31:56,121 | INFO     | corecount: 8
[2026-01-09 10:32:50] 2026-01-09 09:31:56,121 | INFO     | event service: False
[2026-01-09 10:32:50] 2026-01-09 09:31:56,121 | INFO     | sizes: {0: 2283799, 1: 2283998, 6: 2284260, 12: 2284288, 9903: 2312668, 9904: 2312667, 9905: 2321849, 9907: 2321905, 9912: 2322163}
[2026-01-09 10:32:50] 2026-01-09 09:31:56,121 | INFO     | --------------------------------------------------
[2026-01-09 10:32:50] 2026-01-09 09:31:56,122 | INFO     | 
[2026-01-09 10:32:50] 2026-01-09 09:31:56,122 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2026-01-09 10:32:50] 2026-01-09 09:31:56,157 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 10:32:50] 2026-01-09 09:31:56,157 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 10:32:50] 2026-01-09 09:31:56,157 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 10:32:50] 2026-01-09 09:31:56,157 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 10:32:50] 2026-01-09 09:31:56,158 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 10:32:50] 2026-01-09 09:31:56,158 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 10:32:50] 2026-01-09 09:31:56,158 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 10:32:50] 2026-01-09 09:31:56,158 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 10:32:50] 2026-01-09 09:31:56,158 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 10:32:50] 2026-01-09 09:31:56,158 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 10:32:50] 2026-01-09 09:31:56,158 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 10:32:50] 2026-01-09 09:31:56,158 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 10:32:50] 2026-01-09 09:31:56,158 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 10:32:50] 2026-01-09 09:31:56,159 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 10:32:50] 2026-01-09 09:31:56,159 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 10:32:50] 2026-01-09 09:31:56,159 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 10:32:50] 2026-01-09 09:31:56,159 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 10:32:50] 2026-01-09 09:31:56,159 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 10:32:50] 2026-01-09 09:31:56,159 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 10:32:50] 2026-01-09 09:31:56,159 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 10:32:50] 2026-01-09 09:31:56,160 | INFO     | job 6963148397 has completed (purged errors)
[2026-01-09 10:32:50] 2026-01-09 09:31:56,160 | INFO     | overall cleanup function is called
[2026-01-09 10:32:50] 2026-01-09 09:31:57,168 | INFO     | --- collectZombieJob: --- 10, [27635]
[2026-01-09 10:32:50] 2026-01-09 09:31:57,168 | INFO     | zombie collector waiting for pid 27635
[2026-01-09 10:32:50] 2026-01-09 09:31:57,168 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 10:32:50] 2026-01-09 09:31:57,169 | INFO     | collected zombie processes
[2026-01-09 10:32:50] 2026-01-09 09:31:57,169 | INFO     | will attempt to kill all subprocesses of pid=27635
[2026-01-09 10:32:50] 2026-01-09 09:31:57,229 | INFO     | process IDs to be killed: [27635] (in reverse order)
[2026-01-09 10:32:50] 2026-01-09 09:31:57,272 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 10:32:50] 2026-01-09 09:31:57,273 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 10:32:50] 2026-01-09 09:31:57,275 | INFO     | did not find any defunct processes belonging to 27635
[2026-01-09 10:32:50] 2026-01-09 09:31:57,276 | INFO     | did not find any defunct processes belonging to 27635
[2026-01-09 10:32:50] 2026-01-09 09:31:57,276 | INFO     | ready for new job
[2026-01-09 10:32:50] 2026-01-09 09:31:57,277 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 10:32:50] 2026-01-09 09:31:57,278 | INFO     | ***************************************
[2026-01-09 10:32:50] 2026-01-09 09:31:57,278 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 10:32:50] 2026-01-09 09:31:57,278 | INFO     | ***************************************
[2026-01-09 10:32:50] 2026-01-09 09:31:57,278 | INFO     | 
[2026-01-09 10:32:50] 2026-01-09 09:31:57,279 | INFO     | pilot is running in a VM
[2026-01-09 10:32:50] 2026-01-09 09:31:57,279 | INFO     | architecture information:
[2026-01-09 10:32:50] 2026-01-09 09:31:57,279 | INFO     | executing command: cat /etc/os-release
[2026-01-09 10:32:50] 2026-01-09 09:31:57,296 | INFO     | cat /etc/os-release:
[2026-01-09 10:32:50] NAME="CentOS Linux"
[2026-01-09 10:32:50] VERSION="7 (Core)"
[2026-01-09 10:32:50] ID="centos"
[2026-01-09 10:32:50] ID_LIKE="rhel fedora"
[2026-01-09 10:32:50] VERSION_ID="7"
[2026-01-09 10:32:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 10:32:50] ANSI_COLOR="0;31"
[2026-01-09 10:32:50] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 10:32:50] HOME_URL="https://www.centos.org/"
[2026-01-09 10:32:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 10:32:50] 
[2026-01-09 10:32:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 10:32:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 10:32:50] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 10:32:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 10:32:50] 
[2026-01-09 10:32:50] 2026-01-09 09:31:57,296 | INFO     | ***************************************
[2026-01-09 10:32:50] 2026-01-09 09:31:57,799 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2026-01-09 10:32:50] 2026-01-09 09:31:57,818 | INFO     | sufficient remaining disk space (498295898112 B)
[2026-01-09 10:32:50] 2026-01-09 09:31:57,818 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 10:32:50] 2026-01-09 09:31:57,818 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 10:32:50] 2026-01-09 09:31:57,818 | INFO     | update_server=False
[2026-01-09 10:32:50] 2026-01-09 09:31:57,819 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 10:32:50] 2026-01-09 09:31:57,819 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 10:32:50] 2026-01-09 09:31:57,820 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 10:32:50] 2026-01-09 09:31:57,820 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 10:32:50] 2026-01-09 09:31:58,076 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 10:32:50] 2026-01-09 09:31:58,076 | INFO     | aborting loop
[2026-01-09 10:32:50] 2026-01-09 09:31:58,394 | INFO     | all data control threads have been joined
[2026-01-09 10:32:50] 2026-01-09 09:31:58,406 | INFO     | all payload control threads have been joined
[2026-01-09 10:32:50] 2026-01-09 09:31:58,500 | INFO     | all job control threads have been joined
[2026-01-09 10:32:50] 2026-01-09 09:31:58,824 | INFO     | [job] retrieve thread has finished
[2026-01-09 10:32:50] 2026-01-09 09:31:58,826 | INFO     | [job] queue monitor thread has finished
[2026-01-09 10:32:50] 2026-01-09 09:31:58,955 | INFO     | [job] validate thread has finished
[2026-01-09 10:32:50] 2026-01-09 09:31:59,077 | INFO     | [job] job monitor thread has finished
[2026-01-09 10:32:50] 2026-01-09 09:31:59,209 | INFO     | [data] copytool_in thread has finished
[2026-01-09 10:32:50] 2026-01-09 09:31:59,326 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 10:32:50] 2026-01-09 09:31:59,400 | INFO     | [data] control thread has finished
[2026-01-09 10:32:50] 2026-01-09 09:31:59,412 | INFO     | [payload] control thread has finished
[2026-01-09 10:32:50] 2026-01-09 09:31:59,466 | INFO     | [payload] failed_post thread has finished
[2026-01-09 10:32:50] 2026-01-09 09:31:59,506 | INFO     | [job] control thread has finished
[2026-01-09 10:32:50] 2026-01-09 09:31:59,602 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 10:32:50] 2026-01-09 09:31:59,826 | INFO     | [data] copytool_out thread has finished
[2026-01-09 10:32:50] 2026-01-09 09:32:00,137 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 10:32:50] 2026-01-09 09:32:00,144 | INFO     | [payload] validate_post thread has finished
[2026-01-09 10:32:50] 2026-01-09 09:32:01,826 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 10:32:50] 2026-01-09 09:32:08,717 | INFO     | job.realtimelogging is not enabled
[2026-01-09 10:32:50] 2026-01-09 09:32:09,723 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 10:32:50] 2026-01-09 09:32:27,430 | INFO     | PID=21190 has CPU usage=4.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-09 10:32:50] 2026-01-09 09:32:27,430 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 10:32:50] 2026-01-09 09:32:27,430 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 10:32:50] 2026-01-09 09:32:27,430 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 10:32:50] 2026-01-09 09:32:44,347 | INFO     | [monitor] cgroup control has ended
[2026-01-09 10:32:50] 2026-01-09 09:32:44,838 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140344904570688)>', '<ExcThread(monitor, started 140344096192256)>']
[2026-01-09 10:32:50] 2026-01-09 09:32:45,522 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 10:32:50] 2026-01-09 09:32:45,522 | INFO     | [monitor] control thread has ended
[2026-01-09 10:32:50] 2026-01-09 09:32:49,864 | INFO     | all workflow threads have been joined
[2026-01-09 10:32:50] 2026-01-09 09:32:49,864 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 10:32:50] 2026-01-09 09:32:49,864 | INFO     | traces error code: 0
[2026-01-09 10:32:50] 2026-01-09 09:32:49,865 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 10:32:50] 2026-01-09 09:32:50,001 [wrapper] ==== pilot stdout END ====
[2026-01-09 10:32:50] 2026-01-09 09:32:50,005 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 10:32:50] 2026-01-09 09:32:50,010 [wrapper] pilotpid: 21190
[2026-01-09 10:32:50] 2026-01-09 09:32:50,015 [wrapper] Pilot exit status: 0
[2026-01-09 10:32:50] 2026-01-09 09:32:50,030 [wrapper] pandaids: 6963148397
[2026-01-09 10:32:50] 2026-01-09 09:32:50,064 [wrapper] cleanup supervisor_pilot 14135 21191
[2026-01-09 10:32:50] 2026-01-09 09:32:50,068 [wrapper] Test setup, not cleaning
[2026-01-09 10:32:50] 2026-01-09 09:32:50,071 [wrapper] apfmon messages muted
[2026-01-09 10:32:50] 2026-01-09 09:32:50,075 [wrapper] ==== wrapper stdout END ====
[2026-01-09 10:32:50] 2026-01-09 09:32:50,079 [wrapper] ==== wrapper stderr END ====
[2026-01-09 10:32:50]  *** Error codes and diagnostics ***
[2026-01-09 10:32:50]     "exeErrorCode": 0,
[2026-01-09 10:32:50]     "exeErrorDiag": "",
[2026-01-09 10:32:50]     "pilotErrorCode": 0,
[2026-01-09 10:32:50]     "pilotErrorDiag": "",
[2026-01-09 10:32:50]  *** Listing of results directory ***
[2026-01-09 10:32:50] total 442248
[2026-01-09 10:32:50] -rw-r--r--. 1 boinc boinc      5112 Jan  8 17:02 queuedata.json
[2026-01-09 10:32:50] -rw-r--r--. 1 boinc boinc    579449 Jan  8 17:02 pilot3.tar.gz
[2026-01-09 10:32:50] -rwx------. 1 boinc boinc     36322 Jan  8 17:03 runpilot2-wrapper.sh
[2026-01-09 10:32:50] -rw-r--r--. 1 boinc boinc       100 Jan  9 07:46 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 10:32:50] -rwxr-xr-x. 1 boinc boinc      7986 Jan  9 07:46 run_atlas
[2026-01-09 10:32:50] -rw-r--r--. 1 boinc boinc       105 Jan  9 07:46 job.xml
[2026-01-09 10:32:50] -rw-r--r--. 2 boinc boinc 226069866 Jan  9 07:46 EVNT.47898824._001107.pool.root.1
[2026-01-09 10:32:50] drwxrwx--x. 2 boinc boinc        68 Jan  9 07:46 shared
[2026-01-09 10:32:50] -rw-r--r--. 2 boinc boinc    592399 Jan  9 07:46 input.tar.gz
[2026-01-09 10:32:50] -rw-r--r--. 1 boinc boinc      6389 Jan  9 07:46 init_data.xml
[2026-01-09 10:32:50] -rw-r--r--. 2 boinc boinc     15847 Jan  9 07:46 start_atlas.sh
[2026-01-09 10:32:50] -rw-r--r--. 1 boinc boinc         0 Jan  9 07:46 boinc_lockfile
[2026-01-09 10:32:50] -rw-r--r--. 1 boinc boinc      2519 Jan  9 07:46 pandaJob.out
[2026-01-09 10:32:50] -rw-------. 1 boinc boinc    989771 Jan  9 07:46 agis_schedconf.cvmfs.json
[2026-01-09 10:32:50] -rw-------. 1 boinc boinc   1516240 Jan  9 07:46 agis_ddmendpoints.agis.ALL.json
[2026-01-09 10:32:50] drwx------. 5 boinc boinc      4096 Jan  9 07:46 pilot3
[2026-01-09 10:32:50] -rw-------. 1 boinc boinc 219412603 Jan  9 10:31 HITS.47898826._028068.pool.root.1
[2026-01-09 10:32:50] -rw-r--r--. 1 boinc boinc       530 Jan  9 10:31 boinc_task_state.xml
[2026-01-09 10:32:50] -rw-------. 1 boinc boinc        95 Jan  9 10:31 pilot_heartbeat.json
[2026-01-09 10:32:50] -rw-------. 1 boinc boinc      1016 Jan  9 10:31 memory_monitor_summary.json
[2026-01-09 10:32:50] -rw-------. 1 boinc boinc    404461 Jan  9 10:31 log.47898826._028068.job.log.tgz.1
[2026-01-09 10:32:50] -rw-------. 1 boinc boinc      7767 Jan  9 10:31 heartbeat.json
[2026-01-09 10:32:50] -rw-r--r--. 1 boinc boinc      8192 Jan  9 10:32 boinc_mmap_file
[2026-01-09 10:32:50] -rw-r--r--. 1 boinc boinc        28 Jan  9 10:32 wrapper_checkpoint.txt
[2026-01-09 10:32:50] -rw-------. 1 boinc boinc      4881 Jan  9 10:32 pilotlog.txt
[2026-01-09 10:32:50] -rw-------. 1 boinc boinc   1335966 Jan  9 10:32 log.47898826._028068.job.log.1
[2026-01-09 10:32:50] -rw-------. 1 boinc boinc       357 Jan  9 10:32 output.list
[2026-01-09 10:32:50] -rw-r--r--. 1 boinc boinc       620 Jan  9 10:32 runtime_log
[2026-01-09 10:32:50] -rw-------. 1 boinc boinc   1761280 Jan  9 10:32 result.tar.gz
[2026-01-09 10:32:50] -rw-r--r--. 1 boinc boinc      8816 Jan  9 10:32 runtime_log.err
[2026-01-09 10:32:50] -rw-------. 1 boinc boinc       653 Jan  9 10:32 o0PLDm4e7x8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmttkKDmzMUNzn.diag
[2026-01-09 10:32:50] -rw-r--r--. 1 boinc boinc     20742 Jan  9 10:32 stderr.txt
[2026-01-09 10:32:50] HITS file was successfully produced:
[2026-01-09 10:32:50] -rw-------. 1 boinc boinc 219412603 Jan  9 10:31 shared/HITS.pool.root.1
[2026-01-09 10:32:50]  *** Contents of shared directory: ***
[2026-01-09 10:32:50] total 437360
[2026-01-09 10:32:50] -rw-r--r--. 2 boinc boinc 226069866 Jan  9 07:46 ATLAS.root_0
[2026-01-09 10:32:50] -rw-r--r--. 2 boinc boinc    592399 Jan  9 07:46 input.tar.gz
[2026-01-09 10:32:50] -rw-r--r--. 2 boinc boinc     15847 Jan  9 07:46 start_atlas.sh
[2026-01-09 10:32:50] -rw-------. 1 boinc boinc 219412603 Jan  9 10:31 HITS.pool.root.1
[2026-01-09 10:32:50] -rw-------. 1 boinc boinc   1761280 Jan  9 10:32 result.tar.gz
10:32:51 (17462): run_atlas exited; CPU time 74545.958086
10:32:51 (17462): called boinc_finish(0)

</stderr_txt>
]]>

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