Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:41:26 (2998313): wrapper (7.7.26015): starting
23:41:26 (2998313): wrapper: running run_atlas (--nthreads 4)
[2026-01-10 23:41:26] Arguments: --nthreads 4
[2026-01-10 23:41:26] Threads: 4
[2026-01-10 23:41:26] Checking for CVMFS
[2026-01-10 23:41:26] No cvmfs_config command found, will try listing directly
[2026-01-10 23:41:26] CVMFS is ok
[2026-01-10 23:41:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 23:41:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 23:41:26] Further information can be found at the LHC@home message board.
[2026-01-10 23:41:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 23:41:26] Checking for apptainer binary...
[2026-01-10 23:41:26] which: no apptainer in ((null))
[2026-01-10 23:41:26] apptainer is not installed, using version from CVMFS
[2026-01-10 23:41:26] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 23:41:27] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot124/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut12.grid.cesnet.cz
[2026-01-10 23:41:27] apptainer works
[2026-01-10 23:41:27] Set ATHENA_PROC_NUMBER=4
[2026-01-10 23:41:27] Set ATHENA_CORE_NUMBER=4
[2026-01-10 23:41:27] Starting ATLAS job with PandaID=6963078017
[2026-01-10 23:41:27] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot124/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-11 03:47:11]  *** The last 200 lines of the pilot log: ***
[2026-01-11 03:47:11] 2026-01-11 02:44:17,280 | INFO     | monitor loop #984: job 0:6963078017 is in state 'finished'
[2026-01-11 03:47:11] 2026-01-11 02:44:17,280 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 03:47:11] 2026-01-11 02:44:17,709 | INFO     | time since job start (14556s) is within the limit (174528.0s)
[2026-01-11 03:47:11] 2026-01-11 02:44:19,715 | INFO     | time since job start (14558s) is within the limit (174528.0s)
[2026-01-11 03:47:11] 2026-01-11 02:44:19,785 | INFO     | monitor loop #985: job 0:6963078017 is in state 'finished'
[2026-01-11 03:47:11] 2026-01-11 02:44:19,785 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 03:47:11] 2026-01-11 02:44:21,724 | INFO     | time since job start (14560s) is within the limit (174528.0s)
[2026-01-11 03:47:11] 2026-01-11 02:44:22,290 | INFO     | monitor loop #986: job 0:6963078017 is in state 'finished'
[2026-01-11 03:47:11] 2026-01-11 02:44:22,290 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 03:47:11] 2026-01-11 02:44:22,726 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-11 03:47:11] 2026-01-11 02:44:22,748 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 2677.1742031249983
[2026-01-11 03:47:11] 2026-01-11 02:44:22,773 | INFO     | using path: /scratch/boinc/var/slot124/slots/0/PanDA_Pilot-6963078017/memory_monitor_summary.json (trf name=prmon)
[2026-01-11 03:47:11] 2026-01-11 02:44:22,774 | INFO     | extracted standard info from prmon json
[2026-01-11 03:47:11] 2026-01-11 02:44:22,774 | INFO     | extracted standard memory fields from prmon json
[2026-01-11 03:47:11] 2026-01-11 02:44:22,774 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-11 03:47:11] 2026-01-11 02:44:22,774 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-11 03:47:11] 2026-01-11 02:44:22,774 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-11 03:47:11] 2026-01-11 02:44:22,779 | INFO     | fitting pss+swap vs Time
[2026-01-11 03:47:11] 2026-01-11 02:44:22,779 | INFO     | sum of square deviations: 4180243959.5
[2026-01-11 03:47:11] 2026-01-11 02:44:22,781 | INFO     | sum of deviations: 6662656466.500002
[2026-01-11 03:47:11] 2026-01-11 02:44:22,781 | INFO     | mean x: 1768092164.5
[2026-01-11 03:47:11] 2026-01-11 02:44:22,781 | INFO     | mean y: 2324940.449579832
[2026-01-11 03:47:11] 2026-01-11 02:44:22,781 | INFO     | intersect: -2815738026.043635
[2026-01-11 03:47:11] 2026-01-11 02:44:22,782 | INFO     | chi2: 1.3503274198770308
[2026-01-11 03:47:11] 2026-01-11 02:44:22,782 | INFO     | sum of square deviations: 3922276332.0
[2026-01-11 03:47:11] 2026-01-11 02:44:22,784 | INFO     | sum of deviations: 6530629316.999994
[2026-01-11 03:47:11] 2026-01-11 02:44:22,784 | INFO     | mean x: 1768092012.0
[2026-01-11 03:47:11] 2026-01-11 02:44:22,784 | INFO     | mean y: 2324862.3862660946
[2026-01-11 03:47:11] 2026-01-11 02:44:22,784 | INFO     | intersect: -2941566019.1704965
[2026-01-11 03:47:11] 2026-01-11 02:44:22,785 | INFO     | chi2: 1.3506524679482126
[2026-01-11 03:47:11] 2026-01-11 02:44:22,785 | INFO     | current chi2=1.3506524679482126 (change=-0.024071796691459733 %)
[2026-01-11 03:47:11] 2026-01-11 02:44:22,785 | INFO     | right removable region: 232
[2026-01-11 03:47:11] 2026-01-11 02:44:22,785 | INFO     | sum of square deviations: 3922276332.0
[2026-01-11 03:47:11] 2026-01-11 02:44:22,787 | INFO     | sum of deviations: -20503387343.999996
[2026-01-11 03:47:11] 2026-01-11 02:44:22,787 | INFO     | mean x: 1768092317.0
[2026-01-11 03:47:11] 2026-01-11 02:44:22,787 | INFO     | mean y: 2340797.5879828325
[2026-01-11 03:47:11] 2026-01-11 02:44:22,787 | INFO     | intersect: 9244902658.831528
[2026-01-11 03:47:11] 2026-01-11 02:44:22,787 | INFO     | chi2: 0.08696186799679939
[2026-01-11 03:47:11] 2026-01-11 02:44:22,788 | INFO     | current chi2=0.08696186799679939 (change=93.55994207651366 %)
[2026-01-11 03:47:11] 2026-01-11 02:44:22,788 | INFO     | sum of square deviations: 3675146117.0
[2026-01-11 03:47:11] 2026-01-11 02:44:22,790 | INFO     | sum of deviations: -15993053657.499998
[2026-01-11 03:47:11] 2026-01-11 02:44:22,790 | INFO     | mean x: 1768092469.5
[2026-01-11 03:47:11] 2026-01-11 02:44:22,790 | INFO     | mean y: 2338011.2763157897
[2026-01-11 03:47:11] 2026-01-11 02:44:22,790 | INFO     | intersect: 7696507667.642982
[2026-01-11 03:47:11] 2026-01-11 02:44:22,790 | INFO     | chi2: 0.07926765419594309
[2026-01-11 03:47:11] 2026-01-11 02:44:22,791 | INFO     | current chi2=0.07926765419594309 (change=8.847801890754562 %)
[2026-01-11 03:47:11] 2026-01-11 02:44:22,791 | INFO     | left removable region: 20
[2026-01-11 03:47:11] 2026-01-11 02:44:22,791 | INFO     | sum of square deviations: 2954447953.0
[2026-01-11 03:47:11] 2026-01-11 02:44:22,792 | INFO     | sum of deviations: -4385136310.499999
[2026-01-11 03:47:11] 2026-01-11 02:44:22,792 | INFO     | mean x: 1768092591.5
[2026-01-11 03:47:11] 2026-01-11 02:44:22,793 | INFO     | mean y: 2330440.617924528
[2026-01-11 03:47:11] 2026-01-11 02:44:22,793 | INFO     | intersect: 2626620036.0531135
[2026-01-11 03:47:11] 2026-01-11 02:44:22,793 | INFO     | chi2: 0.03938339490612806
[2026-01-11 03:47:11] 2026-01-11 02:44:22,793 | INFO     | current memory leak: -1.48 B/s (using 212 data points, chi2=0.04)
[2026-01-11 03:47:11] 2026-01-11 02:44:22,794 | INFO     | could have reported an average CPU frequency of 2659 MHz (12 samples)
[2026-01-11 03:47:11] 2026-01-11 02:44:22,794 | INFO     | ..............................
[2026-01-11 03:47:11] 2026-01-11 02:44:22,794 | INFO     | . Timing measurements:
[2026-01-11 03:47:11] 2026-01-11 02:44:22,794 | INFO     | . get job = 0 s
[2026-01-11 03:47:11] 2026-01-11 02:44:22,794 | INFO     | . initial setup = 1 s
[2026-01-11 03:47:11] 2026-01-11 02:44:22,794 | INFO     | . payload setup = 8 s
[2026-01-11 03:47:11] 2026-01-11 02:44:22,794 | INFO     | . stage-in = 0 s
[2026-01-11 03:47:11] 2026-01-11 02:44:22,794 | INFO     | . payload execution = 14518 s
[2026-01-11 03:47:11] 2026-01-11 02:44:22,794 | INFO     | . stage-out = 1 s
[2026-01-11 03:47:11] 2026-01-11 02:44:22,794 | INFO     | . log creation = 0 s
[2026-01-11 03:47:11] 2026-01-11 02:44:22,794 | INFO     | ..............................
[2026-01-11 03:47:11] 2026-01-11 02:44:23,250 | INFO     | 
[2026-01-11 03:47:11] 2026-01-11 02:44:23,250 | INFO     | job summary report
[2026-01-11 03:47:11] 2026-01-11 02:44:23,253 | INFO     | --------------------------------------------------
[2026-01-11 03:47:11] 2026-01-11 02:44:23,253 | INFO     | PanDA job id: 6963078017
[2026-01-11 03:47:11] 2026-01-11 02:44:23,253 | INFO     | task id: 47898826
[2026-01-11 03:47:11] 2026-01-11 02:44:23,253 | INFO     | errors: (none)
[2026-01-11 03:47:11] 2026-01-11 02:44:23,253 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-11 03:47:11] 2026-01-11 02:44:23,253 | INFO     | pilot state: finished 
[2026-01-11 03:47:11] 2026-01-11 02:44:23,253 | INFO     | transexitcode: 0
[2026-01-11 03:47:11] 2026-01-11 02:44:23,253 | INFO     | exeerrorcode: 0
[2026-01-11 03:47:11] 2026-01-11 02:44:23,254 | INFO     | exeerrordiag: 
[2026-01-11 03:47:11] 2026-01-11 02:44:23,254 | INFO     | exitcode: 0
[2026-01-11 03:47:11] 2026-01-11 02:44:23,254 | INFO     | exitmsg: OK
[2026-01-11 03:47:11] 2026-01-11 02:44:23,254 | INFO     | cpuconsumptiontime: 56016 s
[2026-01-11 03:47:11] 2026-01-11 02:44:23,254 | INFO     | nevents: 400
[2026-01-11 03:47:11] 2026-01-11 02:44:23,254 | INFO     | neventsw: 0
[2026-01-11 03:47:11] 2026-01-11 02:44:23,254 | INFO     | pid: 3009819
[2026-01-11 03:47:11] 2026-01-11 02:44:23,254 | INFO     | pgrp: 3009819
[2026-01-11 03:47:11] 2026-01-11 02:44:23,254 | INFO     | corecount: 4
[2026-01-11 03:47:11] 2026-01-11 02:44:23,254 | INFO     | event service: False
[2026-01-11 03:47:11] 2026-01-11 02:44:23,254 | INFO     | sizes: {0: 2283810, 1: 2284009, 8: 2284271, 11: 2284299, 14530: 2315601, 14532: 2324623, 14533: 2324807, 14543: 2325001}
[2026-01-11 03:47:11] 2026-01-11 02:44:23,255 | INFO     | --------------------------------------------------
[2026-01-11 03:47:11] 2026-01-11 02:44:23,255 | INFO     | 
[2026-01-11 03:47:11] 2026-01-11 02:44:23,255 | INFO     | executing command: ls -lF /scratch/boinc/var/slot124/slots/0
[2026-01-11 03:47:11] 2026-01-11 02:44:23,294 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-11 03:47:11] 2026-01-11 02:44:23,294 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-11 03:47:11] 2026-01-11 02:44:23,294 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-11 03:47:11] 2026-01-11 02:44:23,294 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-11 03:47:11] 2026-01-11 02:44:23,294 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-11 03:47:11] 2026-01-11 02:44:23,295 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-11 03:47:11] 2026-01-11 02:44:23,295 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-11 03:47:11] 2026-01-11 02:44:23,295 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-11 03:47:11] 2026-01-11 02:44:23,295 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-11 03:47:11] 2026-01-11 02:44:23,295 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-11 03:47:11] 2026-01-11 02:44:23,295 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-11 03:47:11] 2026-01-11 02:44:23,295 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-11 03:47:11] 2026-01-11 02:44:23,295 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-11 03:47:11] 2026-01-11 02:44:23,295 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-11 03:47:11] 2026-01-11 02:44:23,295 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-11 03:47:11] 2026-01-11 02:44:23,296 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-11 03:47:11] 2026-01-11 02:44:23,296 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-11 03:47:11] 2026-01-11 02:44:23,296 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-11 03:47:11] 2026-01-11 02:44:23,296 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-11 03:47:11] 2026-01-11 02:44:23,296 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-11 03:47:11] 2026-01-11 02:44:23,296 | INFO     | job 6963078017 has completed (purged errors)
[2026-01-11 03:47:11] 2026-01-11 02:44:23,296 | INFO     | overall cleanup function is called
[2026-01-11 03:47:11] 2026-01-11 02:44:24,305 | INFO     | --- collectZombieJob: --- 10, [3009819]
[2026-01-11 03:47:11] 2026-01-11 02:44:24,305 | INFO     | zombie collector waiting for pid 3009819
[2026-01-11 03:47:11] 2026-01-11 02:44:24,305 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-11 03:47:11] 2026-01-11 02:44:24,305 | INFO     | collected zombie processes
[2026-01-11 03:47:11] 2026-01-11 02:44:24,305 | INFO     | will attempt to kill all subprocesses of pid=3009819
[2026-01-11 03:47:11] 2026-01-11 02:44:25,166 | INFO     | process IDs to be killed: [3009819] (in reverse order)
[2026-01-11 03:47:11] 2026-01-11 02:44:25,440 | WARNING  | found no corresponding commands to process id(s)
[2026-01-11 03:47:11] 2026-01-11 02:44:25,440 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-11 03:47:11] 2026-01-11 02:44:25,475 | INFO     | did not find any defunct processes belonging to 3009819
[2026-01-11 03:47:11] 2026-01-11 02:44:25,507 | INFO     | did not find any defunct processes belonging to 3009819
[2026-01-11 03:47:11] 2026-01-11 02:44:25,508 | INFO     | ready for new job
[2026-01-11 03:47:11] 2026-01-11 02:44:25,508 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-11 03:47:11] 2026-01-11 02:44:25,511 | INFO     | ***************************************
[2026-01-11 03:47:11] 2026-01-11 02:44:25,511 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-11 03:47:11] 2026-01-11 02:44:25,511 | INFO     | ***************************************
[2026-01-11 03:47:11] 2026-01-11 02:44:25,511 | INFO     | 
[2026-01-11 03:47:11] 2026-01-11 02:44:25,519 | INFO     | architecture information:
[2026-01-11 03:47:11] 2026-01-11 02:44:25,520 | INFO     | executing command: cat /etc/os-release
[2026-01-11 03:47:11] 2026-01-11 02:44:25,545 | INFO     | cat /etc/os-release:
[2026-01-11 03:47:11] NAME="CentOS Linux"
[2026-01-11 03:47:11] VERSION="7 (Core)"
[2026-01-11 03:47:11] ID="centos"
[2026-01-11 03:47:11] ID_LIKE="rhel fedora"
[2026-01-11 03:47:11] VERSION_ID="7"
[2026-01-11 03:47:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-11 03:47:11] ANSI_COLOR="0;31"
[2026-01-11 03:47:11] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-11 03:47:11] HOME_URL="https://www.centos.org/"
[2026-01-11 03:47:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-11 03:47:11] 
[2026-01-11 03:47:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-11 03:47:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-11 03:47:11] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-11 03:47:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-11 03:47:11] 
[2026-01-11 03:47:11] 2026-01-11 02:44:25,545 | INFO     | ***************************************
[2026-01-11 03:47:11] 2026-01-11 02:44:26,048 | INFO     | executing command: df -mP /scratch/boinc/var/slot124/slots/0
[2026-01-11 03:47:11] 2026-01-11 02:44:26,081 | INFO     | sufficient remaining disk space (3345131503616 B)
[2026-01-11 03:47:11] 2026-01-11 02:44:26,082 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-11 03:47:11] 2026-01-11 02:44:26,082 | INFO     | current server update state: UPDATING_FINAL
[2026-01-11 03:47:11] 2026-01-11 02:44:26,082 | INFO     | update_server=False
[2026-01-11 03:47:11] 2026-01-11 02:44:26,082 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-11 03:47:11] 2026-01-11 02:44:26,083 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-11 03:47:11] 2026-01-11 02:44:26,083 | INFO     | aborting loop
[2026-01-11 03:47:11] 2026-01-11 02:44:26,811 | INFO     | all payload control threads have been joined
[2026-01-11 03:47:11] 2026-01-11 02:44:26,879 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-11 03:47:11] 2026-01-11 02:44:27,087 | INFO     | [job] retrieve thread has finished
[2026-01-11 03:47:11] 2026-01-11 02:44:27,088 | INFO     | [job] job monitor thread has finished
[2026-01-11 03:47:11] 2026-01-11 02:44:27,096 | INFO     | all data control threads have been joined
[2026-01-11 03:47:11] 2026-01-11 02:44:27,105 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-11 03:47:11] 2026-01-11 02:44:27,234 | INFO     | [payload] validate_post thread has finished
[2026-01-11 03:47:11] 2026-01-11 02:44:27,252 | INFO     | [data] copytool_in thread has finished
[2026-01-11 03:47:11] 2026-01-11 02:44:27,258 | INFO     | [payload] failed_post thread has finished
[2026-01-11 03:47:11] 2026-01-11 02:44:27,440 | INFO     | [job] validate thread has finished
[2026-01-11 03:47:11] 2026-01-11 02:44:27,630 | INFO     | all job control threads have been joined
[2026-01-11 03:47:11] 2026-01-11 02:44:27,636 | INFO     | [payload] execute_payloads thread has finished
[2026-01-11 03:47:11] 2026-01-11 02:44:27,747 | INFO     | [job] create_data_payload thread has finished
[2026-01-11 03:47:11] 2026-01-11 02:44:27,815 | INFO     | [payload] control thread has finished
[2026-01-11 03:47:11] 2026-01-11 02:44:27,843 | INFO     | [payload] validate_pre thread has finished
[2026-01-11 03:47:11] 2026-01-11 02:44:27,900 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-11 03:47:11] 2026-01-11 02:44:28,101 | INFO     | [data] control thread has finished
[2026-01-11 03:47:11] 2026-01-11 02:44:28,123 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-11 03:47:11] 2026-01-11 02:44:28,635 | INFO     | [job] control thread has finished
[2026-01-11 03:47:11] 2026-01-11 02:44:28,884 | INFO     | [data] copytool_out thread has finished
[2026-01-11 03:47:11] 2026-01-11 02:44:28,905 | INFO     | [job] queue monitor thread has finished
[2026-01-11 03:47:11] 2026-01-11 02:44:32,128 | INFO     | [data] queue_monitor thread has finished
[2026-01-11 03:47:11] 2026-01-11 02:44:55,847 | INFO     | PID=3002381 has CPU usage=5.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-11 03:47:11] 2026-01-11 02:44:55,847 | INFO     | .. there are 11 such processes running
[2026-01-11 03:47:11] 2026-01-11 02:44:55,848 | INFO     | found 0 job(s) in 20 queues
[2026-01-11 03:47:11] 2026-01-11 02:44:55,848 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-11 03:47:11] 2026-01-11 02:44:55,848 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-11 03:47:11] 2026-01-11 02:45:05,551 | INFO     | [monitor] cgroup control has ended
[2026-01-11 03:47:11] 2026-01-11 02:45:06,303 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22847603210048)>', '<ExcThread(monitor, started 22847365809920)>']
[2026-01-11 03:47:11] 2026-01-11 02:45:06,907 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-11 03:47:11] 2026-01-11 02:45:06,907 | INFO     | [monitor] control thread has ended
[2026-01-11 03:47:11] 2026-01-11 02:45:11,328 | INFO     | all workflow threads have been joined
[2026-01-11 03:47:11] 2026-01-11 02:45:11,328 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-11 03:47:11] 2026-01-11 02:45:11,328 | INFO     | traces error code: 0
[2026-01-11 03:47:11] 2026-01-11 02:45:11,329 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-11 03:47:11] 2026-01-11 02:45:11,461 [wrapper] ==== pilot stdout END ====
[2026-01-11 03:47:11] 2026-01-11 02:45:11,465 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-11 03:47:11] 2026-01-11 02:45:11,468 [wrapper] pilotpid: 3002381
[2026-01-11 03:47:11] 2026-01-11 02:45:11,472 [wrapper] Pilot exit status: 0
[2026-01-11 03:47:11] 2026-01-11 02:45:11,487 [wrapper] pandaids: 6963078017
[2026-01-11 03:47:11] 2026-01-11 02:45:11,657 [wrapper] cleanup supervisor_pilot 3571243 3002382
[2026-01-11 03:47:11] 2026-01-11 02:45:11,661 [wrapper] Test setup, not cleaning
[2026-01-11 03:47:11] 2026-01-11 02:45:11,665 [wrapper] apfmon messages muted
[2026-01-11 03:47:11] 2026-01-11 02:45:11,670 [wrapper] ==== wrapper stdout END ====
[2026-01-11 03:47:11] 2026-01-11 02:45:11,673 [wrapper] ==== wrapper stderr END ====
[2026-01-11 03:47:11]  *** Error codes and diagnostics ***
[2026-01-11 03:47:11]     "exeErrorCode": 0,
[2026-01-11 03:47:11]     "exeErrorDiag": "",
[2026-01-11 03:47:11]     "pilotErrorCode": 0,
[2026-01-11 03:47:11]     "pilotErrorDiag": "",
[2026-01-11 03:47:11]  *** Listing of results directory ***
[2026-01-11 03:47:11] total 446424
[2026-01-11 03:47:11] -rw-r--r-- 1 boinc boinc    579449 Jan  8 12:09 pilot3.tar.gz
[2026-01-11 03:47:11] -rwx------ 1 boinc boinc     36322 Jan  8 12:10 runpilot2-wrapper.sh
[2026-01-11 03:47:11] -rw-r--r-- 1 boinc boinc      5112 Jan  8 12:14 queuedata.json
[2026-01-11 03:47:11] -rw-r--r-- 1 boinc boinc       100 Jan 10 23:41 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-11 03:47:11] -rwxr-xr-x 1 boinc boinc      7986 Jan 10 23:41 run_atlas
[2026-01-11 03:47:11] -rw-r--r-- 1 boinc boinc       105 Jan 10 23:41 job.xml
[2026-01-11 03:47:11] -rw-r--r-- 2 boinc boinc 227429794 Jan 10 23:41 EVNT.47898824._000996.pool.root.1
[2026-01-11 03:47:11] -rw-r--r-- 1 boinc boinc      6691 Jan 10 23:41 init_data.xml
[2026-01-11 03:47:11] -rw-r--r-- 2 boinc boinc     15847 Jan 10 23:41 start_atlas.sh
[2026-01-11 03:47:11] drwxrwx--x 2 boinc boinc      4096 Jan 10 23:41 shared
[2026-01-11 03:47:11] -rw-r--r-- 2 boinc boinc    592403 Jan 10 23:41 input.tar.gz
[2026-01-11 03:47:11] -rw-r--r-- 1 boinc boinc         0 Jan 10 23:41 boinc_lockfile
[2026-01-11 03:47:11] -rw-r--r-- 1 boinc boinc      2519 Jan 10 23:41 pandaJob.out
[2026-01-11 03:47:11] -rw------- 1 boinc boinc    989548 Jan 10 23:41 agis_schedconf.cvmfs.json
[2026-01-11 03:47:11] drwx------ 5 boinc boinc      4096 Jan 10 23:41 pilot3
[2026-01-11 03:47:11] -rw------- 1 boinc boinc 220951911 Jan 11 03:43 HITS.47898826._024394.pool.root.1
[2026-01-11 03:47:11] -rw-r--r-- 1 boinc boinc       528 Jan 11 03:43 boinc_task_state.xml
[2026-01-11 03:47:11] -rw------- 1 boinc boinc      1045 Jan 11 03:44 memory_monitor_summary.json
[2026-01-11 03:47:11] -rw------- 1 boinc boinc   1516240 Jan 11 03:44 agis_ddmendpoints.agis.ALL.json
[2026-01-11 03:47:11] -rw------- 1 boinc boinc    414385 Jan 11 03:44 log.47898826._024394.job.log.tgz.1
[2026-01-11 03:47:11] -rw------- 1 boinc boinc      7806 Jan 11 03:44 heartbeat.json
[2026-01-11 03:47:11] -rw------- 1 boinc boinc        95 Jan 11 03:44 pilot_heartbeat.json
[2026-01-11 03:47:11] -rw------- 1 boinc boinc      4836 Jan 11 03:45 pilotlog.txt
[2026-01-11 03:47:11] -rw------- 1 boinc boinc   2008446 Jan 11 03:45 log.47898826._024394.job.log.1
[2026-01-11 03:47:11] -rw------- 1 boinc boinc       357 Jan 11 03:45 output.list
[2026-01-11 03:47:11] -rw-r--r-- 1 boinc boinc       620 Jan 11 03:45 runtime_log
[2026-01-11 03:47:11] -rw------- 1 boinc boinc   2437120 Jan 11 03:45 result.tar.gz
[2026-01-11 03:47:11] -rw-r--r-- 1 boinc boinc      9223 Jan 11 03:45 runtime_log.err
[2026-01-11 03:47:11] -rw------- 1 boinc boinc       666 Jan 11 03:45 6EUNDmX52x8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmGPkKDmVL6cJn.diag
[2026-01-11 03:47:11] -rw-r--r-- 1 boinc boinc        26 Jan 11 03:47 wrapper_checkpoint.txt
[2026-01-11 03:47:11] -rw-r--r-- 1 boinc boinc      8192 Jan 11 03:47 boinc_mmap_file
[2026-01-11 03:47:11] -rw-r--r-- 1 boinc boinc     21155 Jan 11 03:47 stderr.txt
[2026-01-11 03:47:11] HITS file was successfully produced:
[2026-01-11 03:47:11] -rw------- 1 boinc boinc 220951911 Jan 11 03:43 shared/HITS.pool.root.1
[2026-01-11 03:47:11]  *** Contents of shared directory: ***
[2026-01-11 03:47:11] total 440860
[2026-01-11 03:47:11] -rw-r--r-- 2 boinc boinc 227429794 Jan 10 23:41 ATLAS.root_0
[2026-01-11 03:47:11] -rw-r--r-- 2 boinc boinc     15847 Jan 10 23:41 start_atlas.sh
[2026-01-11 03:47:11] -rw-r--r-- 2 boinc boinc    592403 Jan 10 23:41 input.tar.gz
[2026-01-11 03:47:11] -rw------- 1 boinc boinc 220951911 Jan 11 03:43 HITS.pool.root.1
[2026-01-11 03:47:11] -rw------- 1 boinc boinc   2437120 Jan 11 03:45 result.tar.gz
03:47:12 (2998313): run_atlas exited; CPU time 56992.803386
03:47:12 (2998313): called boinc_finish(0)

</stderr_txt>
]]>

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