Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
22:04:37 (2523018): wrapper (7.7.26015): starting
22:04:37 (2523018): wrapper: running run_atlas (--nthreads 8)
[2026-01-08 22:04:37] Arguments: --nthreads 8
[2026-01-08 22:04:37] Threads: 8
[2026-01-08 22:04:37] Checking for CVMFS
[2026-01-08 22:04:38] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 22:04:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 22:04:38] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 22:04:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 22:04:40] 2.13.3.0 12537 92844 395616 154927 0 499 32395746 40960001 11839 16776704 43 375773990 99.601 394336893 37480 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-08 22:04:40] CVMFS is ok
[2026-01-08 22:04:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-08 22:04:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-08 22:04:40] Further information can be found at the LHC@home message board.
[2026-01-08 22:04:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 22:04:40] Checking for apptainer binary...
[2026-01-08 22:04:40] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-08 22:04:40] Running /usr/bin/apptainer --version
[2026-01-08 22:04:40] apptainer version 1.4.5-2.el9
[2026-01-08 22:04:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 22:04:41] c7-11-14.aglt2.org
[2026-01-08 22:04:41] apptainer works
[2026-01-08 22:04:41] Set ATHENA_PROC_NUMBER=8
[2026-01-08 22:04:41] Set ATHENA_CORE_NUMBER=8
[2026-01-08 22:04:41] Starting ATLAS job with PandaID=6963148995
[2026-01-08 22:04:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 07:43:35]  *** The last 200 lines of the pilot log: ***
[2026-01-09 07:43:35] 2026-01-09 12:43:00,735 | INFO     | intersect: -6048397154.066488
[2026-01-09 07:43:35] 2026-01-09 12:43:00,735 | INFO     | chi2: 3.061893911466129
[2026-01-09 07:43:35] 2026-01-09 12:43:00,736 | INFO     | sum of square deviations: 54163956653.26293
[2026-01-09 07:43:35] 2026-01-09 12:43:00,742 | INFO     | sum of deviations: 188142174265.413
[2026-01-09 07:43:35] 2026-01-09 12:43:00,742 | INFO     | mean x: 1767945188.8550985
[2026-01-09 07:43:35] 2026-01-09 12:43:00,742 | INFO     | mean y: 2499692.4865831845
[2026-01-09 07:43:35] 2026-01-09 12:43:00,742 | INFO     | intersect: -6138577739.182851
[2026-01-09 07:43:35] 2026-01-09 12:43:00,743 | INFO     | chi2: 3.0623868141874335
[2026-01-09 07:43:35] 2026-01-09 12:43:00,743 | INFO     | current chi2=3.0623868141874335 (change=-0.01609796862845239 %)
[2026-01-09 07:43:35] 2026-01-09 12:43:00,743 | INFO     | right removable region: 558
[2026-01-09 07:43:35] 2026-01-09 12:43:00,744 | INFO     | sum of square deviations: 54163934939.46751
[2026-01-09 07:43:35] 2026-01-09 12:43:00,750 | INFO     | sum of deviations: 51741448704.381035
[2026-01-09 07:43:35] 2026-01-09 12:43:00,750 | INFO     | mean x: 1767945493.8694096
[2026-01-09 07:43:35] 2026-01-09 12:43:00,750 | INFO     | mean y: 2514309.8819320216
[2026-01-09 07:43:35] 2026-01-09 12:43:00,750 | INFO     | intersect: -1686359683.2173028
[2026-01-09 07:43:35] 2026-01-09 12:43:00,751 | INFO     | chi2: 0.3888758580289547
[2026-01-09 07:43:35] 2026-01-09 12:43:00,751 | INFO     | current chi2=0.3888758580289547 (change=87.29949928791788 %)
[2026-01-09 07:43:35] 2026-01-09 12:43:00,751 | INFO     | sum of square deviations: 52723390321.65531
[2026-01-09 07:43:35] 2026-01-09 12:43:00,758 | INFO     | sum of deviations: 15215780176.731049
[2026-01-09 07:43:35] 2026-01-09 12:43:00,758 | INFO     | mean x: 1767945646.3736463
[2026-01-09 07:43:35] 2026-01-09 12:43:00,758 | INFO     | mean y: 2518181.474729242
[2026-01-09 07:43:35] 2026-01-09 12:43:00,758 | INFO     | intersect: -507704551.8418165
[2026-01-09 07:43:35] 2026-01-09 12:43:00,758 | INFO     | chi2: 0.2250930259485632
[2026-01-09 07:43:35] 2026-01-09 12:43:00,758 | INFO     | current chi2=0.2250930259485632 (change=42.11699664528844 %)
[2026-01-09 07:43:35] 2026-01-09 12:43:00,759 | INFO     | sum of square deviations: 51308579956.06568
[2026-01-09 07:43:35] 2026-01-09 12:43:00,765 | INFO     | sum of deviations: -15884341767.398954
[2026-01-09 07:43:35] 2026-01-09 12:43:00,765 | INFO     | mean x: 1767945798.8797815
[2026-01-09 07:43:35] 2026-01-09 12:43:00,765 | INFO     | mean y: 2521528.3424408017
[2026-01-09 07:43:35] 2026-01-09 12:43:00,765 | INFO     | intersect: 549850168.4975598
[2026-01-09 07:43:35] 2026-01-09 12:43:00,766 | INFO     | chi2: 0.10197121736753402
[2026-01-09 07:43:35] 2026-01-09 12:43:00,766 | INFO     | current chi2=0.10197121736753402 (change=54.698188920861625 %)
[2026-01-09 07:43:35] 2026-01-09 12:43:00,767 | INFO     | sum of square deviations: 49919305196.933754
[2026-01-09 07:43:35] 2026-01-09 12:43:00,772 | INFO     | sum of deviations: -33072723550.48895
[2026-01-09 07:43:35] 2026-01-09 12:43:00,772 | INFO     | mean x: 1767945951.3860295
[2026-01-09 07:43:35] 2026-01-09 12:43:00,773 | INFO     | mean y: 2523411.435661765
[2026-01-09 07:43:35] 2026-01-09 12:43:00,773 | INFO     | intersect: 1173829531.817879
[2026-01-09 07:43:35] 2026-01-09 12:43:00,773 | INFO     | chi2: 0.055924619913699014
[2026-01-09 07:43:35] 2026-01-09 12:43:00,773 | INFO     | current chi2=0.055924619913699014 (change=45.156465365976395 %)
[2026-01-09 07:43:35] 2026-01-09 12:43:00,774 | INFO     | sum of square deviations: 48555366178.541626
[2026-01-09 07:43:35] 2026-01-09 12:43:00,780 | INFO     | sum of deviations: -30177637421.85345
[2026-01-09 07:43:35] 2026-01-09 12:43:00,780 | INFO     | mean x: 1767946103.890538
[2026-01-09 07:43:35] 2026-01-09 12:43:00,780 | INFO     | mean y: 2523087.460111317
[2026-01-09 07:43:35] 2026-01-09 12:43:00,780 | INFO     | intersect: 1101318971.4908547
[2026-01-09 07:43:35] 2026-01-09 12:43:00,781 | INFO     | chi2: 0.0554611724051814
[2026-01-09 07:43:35] 2026-01-09 12:43:00,781 | INFO     | current chi2=0.0554611724051814 (change=0.8287003277497321 %)
[2026-01-09 07:43:35] 2026-01-09 12:43:00,781 | INFO     | left removable region: 50
[2026-01-09 07:43:35] 2026-01-09 12:43:00,781 | INFO     | sum of square deviations: 40649888159.67527
[2026-01-09 07:43:35] 2026-01-09 12:43:00,786 | INFO     | sum of deviations: 1263444813.3621964
[2026-01-09 07:43:35] 2026-01-09 12:43:00,786 | INFO     | mean x: 1767946683.3799212
[2026-01-09 07:43:35] 2026-01-09 12:43:00,787 | INFO     | mean y: 2519194.05511811
[2026-01-09 07:43:35] 2026-01-09 12:43:00,787 | INFO     | intersect: -52430602.08314271
[2026-01-09 07:43:35] 2026-01-09 12:43:00,787 | INFO     | chi2: 0.03295986987721574
[2026-01-09 07:43:35] 2026-01-09 12:43:00,787 | INFO     | current memory leak: 0.03 B/s (using 508 data points, chi2=0.03)
[2026-01-09 07:43:35] 2026-01-09 12:43:00,790 | INFO     | could have reported an average CPU frequency of 3290 MHz (22 samples)
[2026-01-09 07:43:35] 2026-01-09 12:43:00,790 | INFO     | ..............................
[2026-01-09 07:43:35] 2026-01-09 12:43:00,790 | INFO     | . Timing measurements:
[2026-01-09 07:43:35] 2026-01-09 12:43:00,790 | INFO     | . get job = 1 s
[2026-01-09 07:43:35] 2026-01-09 12:43:00,790 | INFO     | . initial setup = 9 s
[2026-01-09 07:43:35] 2026-01-09 12:43:00,790 | INFO     | . payload setup = 65 s
[2026-01-09 07:43:35] 2026-01-09 12:43:00,790 | INFO     | . stage-in = 0 s
[2026-01-09 07:43:35] 2026-01-09 12:43:00,790 | INFO     | . payload execution = 34423 s
[2026-01-09 07:43:35] 2026-01-09 12:43:00,790 | INFO     | . stage-out = 2 s
[2026-01-09 07:43:35] 2026-01-09 12:43:00,790 | INFO     | . log creation = 0 s
[2026-01-09 07:43:35] 2026-01-09 12:43:00,790 | INFO     | ..............................
[2026-01-09 07:43:35] 2026-01-09 12:43:01,001 | INFO     | time since job start (34599s) is within the limit (349056.0s)
[2026-01-09 07:43:35] 2026-01-09 12:43:01,171 | INFO     | 
[2026-01-09 07:43:35] 2026-01-09 12:43:01,172 | INFO     | job summary report
[2026-01-09 07:43:35] 2026-01-09 12:43:01,172 | INFO     | --------------------------------------------------
[2026-01-09 07:43:35] 2026-01-09 12:43:01,172 | INFO     | PanDA job id: 6963148995
[2026-01-09 07:43:35] 2026-01-09 12:43:01,172 | INFO     | task id: 47898826
[2026-01-09 07:43:35] 2026-01-09 12:43:01,172 | INFO     | errors: (none)
[2026-01-09 07:43:35] 2026-01-09 12:43:01,172 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 07:43:35] 2026-01-09 12:43:01,172 | INFO     | pilot state: finished 
[2026-01-09 07:43:35] 2026-01-09 12:43:01,173 | INFO     | transexitcode: 0
[2026-01-09 07:43:35] 2026-01-09 12:43:01,173 | INFO     | exeerrorcode: 0
[2026-01-09 07:43:35] 2026-01-09 12:43:01,173 | INFO     | exeerrordiag: 
[2026-01-09 07:43:35] 2026-01-09 12:43:01,173 | INFO     | exitcode: 0
[2026-01-09 07:43:35] 2026-01-09 12:43:01,173 | INFO     | exitmsg: OK
[2026-01-09 07:43:35] 2026-01-09 12:43:01,173 | INFO     | cpuconsumptiontime: 44636 s
[2026-01-09 07:43:35] 2026-01-09 12:43:01,173 | INFO     | nevents: 400
[2026-01-09 07:43:35] 2026-01-09 12:43:01,173 | INFO     | neventsw: 0
[2026-01-09 07:43:35] 2026-01-09 12:43:01,173 | INFO     | pid: 2566969
[2026-01-09 07:43:35] 2026-01-09 12:43:01,173 | INFO     | pgrp: 2566969
[2026-01-09 07:43:35] 2026-01-09 12:43:01,173 | INFO     | corecount: 8
[2026-01-09 07:43:35] 2026-01-09 12:43:01,173 | INFO     | event service: False
[2026-01-09 07:43:35] 2026-01-09 12:43:01,173 | INFO     | sizes: {0: 2283143, 1: 2283828, 2: 2283828, 3: 2284055, 14: 2284055, 25: 2284083, 36: 2284239, 44: 2284529, 48: 2284557, 34492: 2324551, 34495: 2333885, 34515: 233
[2026-01-09 07:43:35] 2026-01-09 12:43:01,173 | INFO     | --------------------------------------------------
[2026-01-09 07:43:35] 2026-01-09 12:43:01,174 | INFO     | 
[2026-01-09 07:43:35] 2026-01-09 12:43:01,174 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2026-01-09 07:43:35] 2026-01-09 12:43:01,233 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 07:43:35] 2026-01-09 12:43:01,233 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 07:43:35] 2026-01-09 12:43:01,234 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 07:43:35] 2026-01-09 12:43:01,234 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 07:43:35] 2026-01-09 12:43:01,234 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 07:43:35] 2026-01-09 12:43:01,234 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 07:43:35] 2026-01-09 12:43:01,234 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 07:43:35] 2026-01-09 12:43:01,234 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 07:43:35] 2026-01-09 12:43:01,234 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 07:43:35] 2026-01-09 12:43:01,234 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 07:43:35] 2026-01-09 12:43:01,234 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 07:43:35] 2026-01-09 12:43:01,234 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 07:43:35] 2026-01-09 12:43:01,234 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 07:43:35] 2026-01-09 12:43:01,234 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 07:43:35] 2026-01-09 12:43:01,234 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 07:43:35] 2026-01-09 12:43:01,234 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 07:43:35] 2026-01-09 12:43:01,234 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 07:43:35] 2026-01-09 12:43:01,234 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 07:43:35] 2026-01-09 12:43:01,235 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 07:43:35] 2026-01-09 12:43:01,235 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 07:43:35] 2026-01-09 12:43:01,235 | INFO     | job 6963148995 has completed (purged errors)
[2026-01-09 07:43:35] 2026-01-09 12:43:01,235 | INFO     | overall cleanup function is called
[2026-01-09 07:43:35] 2026-01-09 12:43:02,248 | INFO     | --- collectZombieJob: --- 10, [2566969]
[2026-01-09 07:43:35] 2026-01-09 12:43:02,248 | INFO     | zombie collector waiting for pid 2566969
[2026-01-09 07:43:35] 2026-01-09 12:43:02,248 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 07:43:35] 2026-01-09 12:43:02,248 | INFO     | collected zombie processes
[2026-01-09 07:43:35] 2026-01-09 12:43:02,248 | INFO     | will attempt to kill all subprocesses of pid=2566969
[2026-01-09 07:43:35] 2026-01-09 12:43:02,627 | INFO     | process IDs to be killed: [2566969] (in reverse order)
[2026-01-09 07:43:35] 2026-01-09 12:43:03,839 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 07:43:35] 2026-01-09 12:43:03,840 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 07:43:35] 2026-01-09 12:43:03,865 | INFO     | did not find any defunct processes belonging to 2566969
[2026-01-09 07:43:35] 2026-01-09 12:43:03,888 | INFO     | did not find any defunct processes belonging to 2566969
[2026-01-09 07:43:35] 2026-01-09 12:43:03,889 | INFO     | ready for new job
[2026-01-09 07:43:35] 2026-01-09 12:43:03,889 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 07:43:35] 2026-01-09 12:43:03,896 | INFO     | ***************************************
[2026-01-09 07:43:35] 2026-01-09 12:43:03,898 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 07:43:35] 2026-01-09 12:43:03,898 | INFO     | ***************************************
[2026-01-09 07:43:35] 2026-01-09 12:43:03,898 | INFO     | 
[2026-01-09 07:43:35] 2026-01-09 12:43:03,903 | INFO     | architecture information:
[2026-01-09 07:43:35] 2026-01-09 12:43:03,903 | INFO     | executing command: cat /etc/os-release
[2026-01-09 07:43:35] 2026-01-09 12:43:03,970 | INFO     | cat /etc/os-release:
[2026-01-09 07:43:35] NAME="CentOS Linux"
[2026-01-09 07:43:35] VERSION="7 (Core)"
[2026-01-09 07:43:35] ID="centos"
[2026-01-09 07:43:35] ID_LIKE="rhel fedora"
[2026-01-09 07:43:35] VERSION_ID="7"
[2026-01-09 07:43:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 07:43:35] ANSI_COLOR="0;31"
[2026-01-09 07:43:35] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 07:43:35] HOME_URL="https://www.centos.org/"
[2026-01-09 07:43:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 07:43:35] 
[2026-01-09 07:43:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 07:43:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 07:43:35] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 07:43:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 07:43:35] 
[2026-01-09 07:43:35] 2026-01-09 12:43:03,970 | INFO     | ***************************************
[2026-01-09 07:43:35] 2026-01-09 12:43:04,473 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2026-01-09 07:43:35] 2026-01-09 12:43:04,709 | INFO     | sufficient remaining disk space (85188411392 B)
[2026-01-09 07:43:35] 2026-01-09 12:43:04,709 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 07:43:35] 2026-01-09 12:43:04,710 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 07:43:35] 2026-01-09 12:43:04,710 | INFO     | update_server=False
[2026-01-09 07:43:35] 2026-01-09 12:43:04,710 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 07:43:35] 2026-01-09 12:43:04,711 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 07:43:35] 2026-01-09 12:43:04,711 | INFO     | aborting loop
[2026-01-09 07:43:35] 2026-01-09 12:43:04,715 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 07:43:35] 2026-01-09 12:43:05,071 | INFO     | all job control threads have been joined
[2026-01-09 07:43:35] 2026-01-09 12:43:05,136 | INFO     | all data control threads have been joined
[2026-01-09 07:43:35] 2026-01-09 12:43:05,479 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 07:43:35] 2026-01-09 12:43:05,716 | INFO     | [job] job monitor thread has finished
[2026-01-09 07:43:35] 2026-01-09 12:43:05,739 | INFO     | [job] retrieve thread has finished
[2026-01-09 07:43:35] 2026-01-09 12:43:05,891 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 07:43:35] 2026-01-09 12:43:05,982 | INFO     | [data] copytool_in thread has finished
[2026-01-09 07:43:35] 2026-01-09 12:43:06,019 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 07:43:35] 2026-01-09 12:43:06,077 | INFO     | [job] control thread has finished
[2026-01-09 07:43:35] 2026-01-09 12:43:06,142 | INFO     | [data] control thread has finished
[2026-01-09 07:43:35] 2026-01-09 12:43:06,181 | INFO     | all payload control threads have been joined
[2026-01-09 07:43:35] 2026-01-09 12:43:06,375 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 07:43:35] 2026-01-09 12:43:06,377 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 07:43:35] 2026-01-09 12:43:06,534 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 07:43:35] 2026-01-09 12:43:06,722 | INFO     | [data] copytool_out thread has finished
[2026-01-09 07:43:35] 2026-01-09 12:43:06,861 | INFO     | [payload] validate_post thread has finished
[2026-01-09 07:43:35] 2026-01-09 12:43:06,861 | INFO     | [payload] failed_post thread has finished
[2026-01-09 07:43:35] 2026-01-09 12:43:06,894 | INFO     | [job] validate thread has finished
[2026-01-09 07:43:35] 2026-01-09 12:43:06,896 | INFO     | [job] queue monitor thread has finished
[2026-01-09 07:43:35] 2026-01-09 12:43:07,187 | INFO     | [payload] control thread has finished
[2026-01-09 07:43:35] 2026-01-09 12:43:09,490 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 07:43:35] 2026-01-09 12:43:23,203 | INFO     | [monitor] cgroup control has ended
[2026-01-09 07:43:35] 2026-01-09 12:43:24,079 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140561337448256)>', '<ExcThread(monitor, started 140560715212544)>']
[2026-01-09 07:43:35] 2026-01-09 12:43:29,105 | INFO     | all workflow threads have been joined
[2026-01-09 07:43:35] 2026-01-09 12:43:29,105 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 07:43:35] 2026-01-09 12:43:29,105 | INFO     | traces error code: 0
[2026-01-09 07:43:35] 2026-01-09 12:43:29,105 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 07:43:35] 2026-01-09 12:43:34,376 | INFO     | PID=2537349 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 07:43:35] 2026-01-09 12:43:34,377 | INFO     | .. there are 11 such processes running
[2026-01-09 07:43:35] 2026-01-09 12:43:34,377 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 07:43:35] 2026-01-09 12:43:34,377 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 07:43:35] 2026-01-09 12:43:34,377 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 07:43:35] 2026-01-09 12:43:34,377 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 07:43:35] 2026-01-09 12:43:34,377 | INFO     | [monitor] control thread has ended
[2026-01-09 07:43:35] 2026-01-09 12:43:34,551 [wrapper] ==== pilot stdout END ====
[2026-01-09 07:43:35] 2026-01-09 12:43:34,599 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 07:43:35] 2026-01-09 12:43:34,601 [wrapper] pilotpid: 2537349
[2026-01-09 07:43:35] 2026-01-09 12:43:34,604 [wrapper] Pilot exit status: 0
[2026-01-09 07:43:35] 2026-01-09 12:43:34,745 [wrapper] pandaids: 6963148995
[2026-01-09 07:43:35] 2026-01-09 12:43:35,376 [wrapper] cleanup supervisor_pilot 3910374 2537350
[2026-01-09 07:43:35] 2026-01-09 12:43:35,380 [wrapper] Test setup, not cleaning
[2026-01-09 07:43:35] 2026-01-09 12:43:35,424 [wrapper] apfmon messages muted
[2026-01-09 07:43:35] 2026-01-09 12:43:35,451 [wrapper] ==== wrapper stdout END ====
[2026-01-09 07:43:35] 2026-01-09 12:43:35,497 [wrapper] ==== wrapper stderr END ====
[2026-01-09 07:43:35]  *** Error codes and diagnostics ***
[2026-01-09 07:43:35]     "exeErrorCode": 0,
[2026-01-09 07:43:35]     "exeErrorDiag": "",
[2026-01-09 07:43:35]     "pilotErrorCode": 0,
[2026-01-09 07:43:35]     "pilotErrorDiag": "",
[2026-01-09 07:43:35]  *** Listing of results directory ***
[2026-01-09 07:43:35] total 449168
[2026-01-09 07:43:35] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 11:02 queuedata.json
[2026-01-09 07:43:35] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 11:02 pilot3.tar.gz
[2026-01-09 07:43:35] -rwx------. 1 boincer umatlas     36322 Jan  8 11:02 runpilot2-wrapper.sh
[2026-01-09 07:43:35] -rw-r--r--. 1 boincer umatlas       100 Jan  8 22:04 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 07:43:35] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  8 22:04 run_atlas
[2026-01-09 07:43:35] -rw-r--r--. 1 boincer umatlas       105 Jan  8 22:04 job.xml
[2026-01-09 07:43:35] -rw-r--r--. 2 boincer umatlas 223113233 Jan  8 22:04 EVNT.47898824._001118.pool.root.1
[2026-01-09 07:43:35] -rw-r--r--. 2 boincer umatlas     15847 Jan  8 22:04 start_atlas.sh
[2026-01-09 07:43:35] drwxrwx--x. 2 boincer umatlas      4096 Jan  8 22:04 shared
[2026-01-09 07:43:35] -rw-r--r--. 2 boincer umatlas    592396 Jan  8 22:04 input.tar.gz
[2026-01-09 07:43:35] -rw-r--r--. 1 boincer umatlas         0 Jan  8 22:04 boinc_lockfile
[2026-01-09 07:43:35] -rw-r--r--. 1 boincer umatlas      2520 Jan  8 22:04 pandaJob.out
[2026-01-09 07:43:35] -rw-------. 1 boincer umatlas        57 Jan  8 22:04 setup.sh.local
[2026-01-09 07:43:35] -rw-------. 1 boincer umatlas    989763 Jan  8 22:06 agis_schedconf.cvmfs.json
[2026-01-09 07:43:35] drwx------. 5 boincer umatlas      4096 Jan  8 22:06 pilot3
[2026-01-09 07:43:35] -rw-r--r--. 1 boincer umatlas      6902 Jan  9 07:40 init_data.xml
[2026-01-09 07:43:35] -rw-------. 1 boincer umatlas 222813461 Jan  9 07:41 HITS.47898826._028343.pool.root.1
[2026-01-09 07:43:35] -rw-r--r--. 1 boincer umatlas       531 Jan  9 07:42 boinc_task_state.xml
[2026-01-09 07:43:35] -rw-------. 1 boincer umatlas      1030 Jan  9 07:42 memory_monitor_summary.json
[2026-01-09 07:43:35] -rw-------. 1 boincer umatlas   1516240 Jan  9 07:42 agis_ddmendpoints.agis.ALL.json
[2026-01-09 07:43:35] -rw-------. 1 boincer umatlas    726930 Jan  9 07:42 log.47898826._028343.job.log.tgz.1
[2026-01-09 07:43:35] -rw-------. 1 boincer umatlas        95 Jan  9 07:42 pilot_heartbeat.json
[2026-01-09 07:43:35] -rw-------. 1 boincer umatlas      7773 Jan  9 07:43 heartbeat.json
[2026-01-09 07:43:35] -rw-r--r--. 1 boincer umatlas      8192 Jan  9 07:43 boinc_mmap_file
[2026-01-09 07:43:35] -rw-r--r--. 1 boincer umatlas        28 Jan  9 07:43 wrapper_checkpoint.txt
[2026-01-09 07:43:35] -rw-------. 1 boincer umatlas       823 Jan  9 07:43 pilotlog.txt
[2026-01-09 07:43:35] -rw-------. 1 boincer umatlas   4326422 Jan  9 07:43 log.47898826._028343.job.log.1
[2026-01-09 07:43:35] -rw-------. 1 boincer umatlas       357 Jan  9 07:43 output.list
[2026-01-09 07:43:35] -rw-r--r--. 1 boincer umatlas       620 Jan  9 07:43 runtime_log
[2026-01-09 07:43:35] -rw-------. 1 boincer umatlas   5068800 Jan  9 07:43 result.tar.gz
[2026-01-09 07:43:35] -rw-r--r--. 1 boincer umatlas      9343 Jan  9 07:43 runtime_log.err
[2026-01-09 07:43:35] -rw-------. 1 boincer umatlas       658 Jan  9 07:43 Ob6KDm5d7x8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmSdfKDmHlDdlm.diag
[2026-01-09 07:43:35] -rw-r--r--. 1 boincer umatlas     21088 Jan  9 07:43 stderr.txt
[2026-01-09 07:43:35] HITS file was successfully produced:
[2026-01-09 07:43:35] -rw-------. 1 boincer umatlas 222813461 Jan  9 07:41 shared/HITS.pool.root.1
[2026-01-09 07:43:35]  *** Contents of shared directory: ***
[2026-01-09 07:43:35] total 441036
[2026-01-09 07:43:35] -rw-r--r--. 2 boincer umatlas 223113233 Jan  8 22:04 ATLAS.root_0
[2026-01-09 07:43:35] -rw-r--r--. 2 boincer umatlas     15847 Jan  8 22:04 start_atlas.sh
[2026-01-09 07:43:35] -rw-r--r--. 2 boincer umatlas    592396 Jan  8 22:04 input.tar.gz
[2026-01-09 07:43:35] -rw-------. 1 boincer umatlas 222813461 Jan  9 07:41 HITS.pool.root.1
[2026-01-09 07:43:35] -rw-------. 1 boincer umatlas   5068800 Jan  9 07:43 result.tar.gz
07:43:37 (2523018): run_atlas exited; CPU time 45282.806811
07:43:37 (2523018): called boinc_finish(0)

</stderr_txt>
]]>

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