Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:24:31 (3456235): wrapper (7.7.26015): starting
21:24:31 (3456235): wrapper: running run_atlas (--nthreads 4)
[2026-01-10 21:24:31] Arguments: --nthreads 4
[2026-01-10 21:24:31] Threads: 4
[2026-01-10 21:24:31] Checking for CVMFS
[2026-01-10 21:24:31] No cvmfs_config command found, will try listing directly
[2026-01-10 21:24:31] CVMFS is ok
[2026-01-10 21:24:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 21:24:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 21:24:31] Further information can be found at the LHC@home message board.
[2026-01-10 21:24:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 21:24:31] Checking for apptainer binary...
[2026-01-10 21:24:31] which: no apptainer in ((null))
[2026-01-10 21:24:31] apptainer is not installed, using version from CVMFS
[2026-01-10 21:24:31] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 21:24:31] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot64/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut08.grid.cesnet.cz
[2026-01-10 21:24:31] apptainer works
[2026-01-10 21:24:31] Set ATHENA_PROC_NUMBER=4
[2026-01-10 21:24:31] Set ATHENA_CORE_NUMBER=4
[2026-01-10 21:24:31] Starting ATLAS job with PandaID=6963148327
[2026-01-10 21:24:31] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot64/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-11 01:33:15]  *** The last 200 lines of the pilot log: ***
[2026-01-11 01:33:15] 2026-01-11 00:31:17,453 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-11 01:33:15] 2026-01-11 00:31:17,999 | INFO     | time since job start (14795s) is within the limit (349056.0s)
[2026-01-11 01:33:15] 2026-01-11 00:31:18,922 | INFO     | monitor loop #1071: job 0:6963148327 is in state 'finished'
[2026-01-11 01:33:15] 2026-01-11 00:31:18,923 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 01:33:15] 2026-01-11 00:31:20,004 | INFO     | time since job start (14798s) is within the limit (349056.0s)
[2026-01-11 01:33:15] 2026-01-11 00:31:21,429 | INFO     | monitor loop #1072: job 0:6963148327 is in state 'finished'
[2026-01-11 01:33:15] 2026-01-11 00:31:21,429 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 01:33:15] 2026-01-11 00:31:22,010 | INFO     | time since job start (14800s) is within the limit (349056.0s)
[2026-01-11 01:33:15] 2026-01-11 00:31:22,064 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-11 01:33:15] 2026-01-11 00:31:22,074 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 2632.0678437500005
[2026-01-11 01:33:15] 2026-01-11 00:31:22,087 | INFO     | using path: /scratch/boinc/var/slot64/slots/0/PanDA_Pilot-6963148327/memory_monitor_summary.json (trf name=prmon)
[2026-01-11 01:33:15] 2026-01-11 00:31:22,088 | INFO     | extracted standard info from prmon json
[2026-01-11 01:33:15] 2026-01-11 00:31:22,088 | INFO     | extracted standard memory fields from prmon json
[2026-01-11 01:33:15] 2026-01-11 00:31:22,088 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-11 01:33:15] 2026-01-11 00:31:22,089 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-11 01:33:15] 2026-01-11 00:31:22,089 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-11 01:33:15] 2026-01-11 00:31:22,094 | INFO     | fitting pss+swap vs Time
[2026-01-11 01:33:15] 2026-01-11 00:31:22,095 | INFO     | sum of square deviations: 4394577280.5
[2026-01-11 01:33:15] 2026-01-11 00:31:22,096 | INFO     | sum of deviations: -83809606597.0
[2026-01-11 01:33:15] 2026-01-11 00:31:22,096 | INFO     | mean x: 1768084060.5
[2026-01-11 01:33:15] 2026-01-11 00:31:22,096 | INFO     | mean y: 2408741.4380165287
[2026-01-11 01:33:15] 2026-01-11 00:31:22,097 | INFO     | intersect: 33721790625.665943
[2026-01-11 01:33:15] 2026-01-11 00:31:22,097 | INFO     | chi2: 1.8004231715273078
[2026-01-11 01:33:15] 2026-01-11 00:31:22,097 | INFO     | sum of square deviations: 4127772278.0
[2026-01-11 01:33:15] 2026-01-11 00:31:22,099 | INFO     | sum of deviations: -81665184720.0
[2026-01-11 01:33:15] 2026-01-11 00:31:22,099 | INFO     | mean x: 1768083908.0
[2026-01-11 01:33:15] 2026-01-11 00:31:22,099 | INFO     | mean y: 2409967.29535865
[2026-01-11 01:33:15] 2026-01-11 00:31:22,100 | INFO     | intersect: 34982755108.14702
[2026-01-11 01:33:15] 2026-01-11 00:31:22,100 | INFO     | chi2: 1.7906101894155326
[2026-01-11 01:33:15] 2026-01-11 00:31:22,100 | INFO     | current chi2=1.7906101894155326 (change=0.5450375371169418 %)
[2026-01-11 01:33:15] 2026-01-11 00:31:22,100 | INFO     | right removable region: 236
[2026-01-11 01:33:15] 2026-01-11 00:31:22,101 | INFO     | sum of square deviations: 4127772278.0
[2026-01-11 01:33:15] 2026-01-11 00:31:22,102 | INFO     | sum of deviations: -108905683148.00002
[2026-01-11 01:33:15] 2026-01-11 00:31:22,102 | INFO     | mean x: 1768084213.0
[2026-01-11 01:33:15] 2026-01-11 00:31:22,102 | INFO     | mean y: 2422875.0168776372
[2026-01-11 01:33:15] 2026-01-11 00:31:22,102 | INFO     | intersect: 46650931104.55904
[2026-01-11 01:33:15] 2026-01-11 00:31:22,103 | INFO     | chi2: 0.5545656842817137
[2026-01-11 01:33:15] 2026-01-11 00:31:22,103 | INFO     | current chi2=0.5545656842817137 (change=69.19803671426463 %)
[2026-01-11 01:33:15] 2026-01-11 00:31:22,103 | INFO     | sum of square deviations: 3871990738.0
[2026-01-11 01:33:15] 2026-01-11 00:31:22,105 | INFO     | sum of deviations: -98060473902.49998
[2026-01-11 01:33:15] 2026-01-11 00:31:22,105 | INFO     | mean x: 1768084365.5
[2026-01-11 01:33:15] 2026-01-11 00:31:22,105 | INFO     | mean y: 2416405.7629310344
[2026-01-11 01:33:15] 2026-01-11 00:31:22,105 | INFO     | intersect: 44780207085.6256
[2026-01-11 01:33:15] 2026-01-11 00:31:22,106 | INFO     | chi2: 0.5442538951075163
[2026-01-11 01:33:15] 2026-01-11 00:31:22,106 | INFO     | current chi2=0.5442538951075163 (change=1.859435133919882 %)
[2026-01-11 01:33:15] 2026-01-11 00:31:22,106 | INFO     | left removable region: 20
[2026-01-11 01:33:15] 2026-01-11 00:31:22,106 | INFO     | sum of square deviations: 3124858590.0
[2026-01-11 01:33:15] 2026-01-11 00:31:22,108 | INFO     | sum of deviations: -72655779990.50002
[2026-01-11 01:33:15] 2026-01-11 00:31:22,108 | INFO     | mean x: 1768084487.5
[2026-01-11 01:33:15] 2026-01-11 00:31:22,108 | INFO     | mean y: 2402996.282407407
[2026-01-11 01:33:15] 2026-01-11 00:31:22,108 | INFO     | intersect: 41111961662.236626
[2026-01-11 01:33:15] 2026-01-11 00:31:22,108 | INFO     | chi2: 0.4906093129052876
[2026-01-11 01:33:15] 2026-01-11 00:31:22,109 | INFO     | current memory leak: -23.25 B/s (using 216 data points, chi2=0.49)
[2026-01-11 01:33:15] 2026-01-11 00:31:22,109 | INFO     | could have reported an average CPU frequency of 2739 MHz (12 samples)
[2026-01-11 01:33:15] 2026-01-11 00:31:22,109 | INFO     | ..............................
[2026-01-11 01:33:15] 2026-01-11 00:31:22,109 | INFO     | . Timing measurements:
[2026-01-11 01:33:15] 2026-01-11 00:31:22,110 | INFO     | . get job = 0 s
[2026-01-11 01:33:15] 2026-01-11 00:31:22,110 | INFO     | . initial setup = 1 s
[2026-01-11 01:33:15] 2026-01-11 00:31:22,110 | INFO     | . payload setup = 6 s
[2026-01-11 01:33:15] 2026-01-11 00:31:22,110 | INFO     | . stage-in = 0 s
[2026-01-11 01:33:15] 2026-01-11 00:31:22,110 | INFO     | . payload execution = 14761 s
[2026-01-11 01:33:15] 2026-01-11 00:31:22,110 | INFO     | . stage-out = 1 s
[2026-01-11 01:33:15] 2026-01-11 00:31:22,110 | INFO     | . log creation = 0 s
[2026-01-11 01:33:15] 2026-01-11 00:31:22,110 | INFO     | ..............................
[2026-01-11 01:33:15] 2026-01-11 00:31:22,214 | INFO     | 
[2026-01-11 01:33:15] 2026-01-11 00:31:22,214 | INFO     | job summary report
[2026-01-11 01:33:15] 2026-01-11 00:31:22,214 | INFO     | --------------------------------------------------
[2026-01-11 01:33:15] 2026-01-11 00:31:22,214 | INFO     | PanDA job id: 6963148327
[2026-01-11 01:33:15] 2026-01-11 00:31:22,214 | INFO     | task id: 47898826
[2026-01-11 01:33:15] 2026-01-11 00:31:22,214 | INFO     | errors: (none)
[2026-01-11 01:33:15] 2026-01-11 00:31:22,215 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-11 01:33:15] 2026-01-11 00:31:22,215 | INFO     | pilot state: finished 
[2026-01-11 01:33:15] 2026-01-11 00:31:22,215 | INFO     | transexitcode: 0
[2026-01-11 01:33:15] 2026-01-11 00:31:22,215 | INFO     | exeerrorcode: 0
[2026-01-11 01:33:15] 2026-01-11 00:31:22,215 | INFO     | exeerrordiag: 
[2026-01-11 01:33:15] 2026-01-11 00:31:22,215 | INFO     | exitcode: 0
[2026-01-11 01:33:15] 2026-01-11 00:31:22,215 | INFO     | exitmsg: OK
[2026-01-11 01:33:15] 2026-01-11 00:31:22,215 | INFO     | cpuconsumptiontime: 57454 s
[2026-01-11 01:33:15] 2026-01-11 00:31:22,215 | INFO     | nevents: 400
[2026-01-11 01:33:15] 2026-01-11 00:31:22,215 | INFO     | neventsw: 0
[2026-01-11 01:33:15] 2026-01-11 00:31:22,215 | INFO     | pid: 3467217
[2026-01-11 01:33:15] 2026-01-11 00:31:22,215 | INFO     | pgrp: 3467217
[2026-01-11 01:33:15] 2026-01-11 00:31:22,216 | INFO     | corecount: 4
[2026-01-11 01:33:15] 2026-01-11 00:31:22,216 | INFO     | event service: False
[2026-01-11 01:33:15] 2026-01-11 00:31:22,216 | INFO     | sizes: {0: 2283976, 1: 2283976, 5: 2284266, 11: 2284322, 14771: 2315284, 14773: 2324304, 14776: 2324488, 14783: 2324682}
[2026-01-11 01:33:15] 2026-01-11 00:31:22,216 | INFO     | --------------------------------------------------
[2026-01-11 01:33:15] 2026-01-11 00:31:22,216 | INFO     | 
[2026-01-11 01:33:15] 2026-01-11 00:31:22,216 | INFO     | executing command: ls -lF /scratch/boinc/var/slot64/slots/0
[2026-01-11 01:33:15] 2026-01-11 00:31:22,237 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-11 01:33:15] 2026-01-11 00:31:22,237 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-11 01:33:15] 2026-01-11 00:31:22,237 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-11 01:33:15] 2026-01-11 00:31:22,237 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-11 01:33:15] 2026-01-11 00:31:22,237 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-11 01:33:15] 2026-01-11 00:31:22,238 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-11 01:33:15] 2026-01-11 00:31:22,238 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-11 01:33:15] 2026-01-11 00:31:22,238 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-11 01:33:15] 2026-01-11 00:31:22,238 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-11 01:33:15] 2026-01-11 00:31:22,238 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-11 01:33:15] 2026-01-11 00:31:22,238 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-11 01:33:15] 2026-01-11 00:31:22,238 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-11 01:33:15] 2026-01-11 00:31:22,238 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-11 01:33:15] 2026-01-11 00:31:22,238 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-11 01:33:15] 2026-01-11 00:31:22,238 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-11 01:33:15] 2026-01-11 00:31:22,239 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-11 01:33:15] 2026-01-11 00:31:22,239 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-11 01:33:15] 2026-01-11 00:31:22,239 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-11 01:33:15] 2026-01-11 00:31:22,239 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-11 01:33:15] 2026-01-11 00:31:22,239 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-11 01:33:15] 2026-01-11 00:31:22,239 | INFO     | job 6963148327 has completed (purged errors)
[2026-01-11 01:33:15] 2026-01-11 00:31:22,239 | INFO     | overall cleanup function is called
[2026-01-11 01:33:15] 2026-01-11 00:31:23,247 | INFO     | --- collectZombieJob: --- 10, [3467217]
[2026-01-11 01:33:15] 2026-01-11 00:31:23,248 | INFO     | zombie collector waiting for pid 3467217
[2026-01-11 01:33:15] 2026-01-11 00:31:23,248 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-11 01:33:15] 2026-01-11 00:31:23,248 | INFO     | collected zombie processes
[2026-01-11 01:33:15] 2026-01-11 00:31:23,248 | INFO     | will attempt to kill all subprocesses of pid=3467217
[2026-01-11 01:33:15] 2026-01-11 00:31:23,656 | INFO     | process IDs to be killed: [3467217] (in reverse order)
[2026-01-11 01:33:15] 2026-01-11 00:31:23,771 | WARNING  | found no corresponding commands to process id(s)
[2026-01-11 01:33:15] 2026-01-11 00:31:23,771 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-11 01:33:15] 2026-01-11 00:31:23,785 | INFO     | did not find any defunct processes belonging to 3467217
[2026-01-11 01:33:15] 2026-01-11 00:31:23,799 | INFO     | did not find any defunct processes belonging to 3467217
[2026-01-11 01:33:15] 2026-01-11 00:31:23,800 | INFO     | ready for new job
[2026-01-11 01:33:15] 2026-01-11 00:31:23,800 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-11 01:33:15] 2026-01-11 00:31:23,802 | INFO     | ***************************************
[2026-01-11 01:33:15] 2026-01-11 00:31:23,802 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-11 01:33:15] 2026-01-11 00:31:23,803 | INFO     | ***************************************
[2026-01-11 01:33:15] 2026-01-11 00:31:23,803 | INFO     | 
[2026-01-11 01:33:15] 2026-01-11 00:31:23,807 | INFO     | architecture information:
[2026-01-11 01:33:15] 2026-01-11 00:31:23,807 | INFO     | executing command: cat /etc/os-release
[2026-01-11 01:33:15] 2026-01-11 00:31:23,825 | INFO     | cat /etc/os-release:
[2026-01-11 01:33:15] NAME="CentOS Linux"
[2026-01-11 01:33:15] VERSION="7 (Core)"
[2026-01-11 01:33:15] ID="centos"
[2026-01-11 01:33:15] ID_LIKE="rhel fedora"
[2026-01-11 01:33:15] VERSION_ID="7"
[2026-01-11 01:33:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-11 01:33:15] ANSI_COLOR="0;31"
[2026-01-11 01:33:15] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-11 01:33:15] HOME_URL="https://www.centos.org/"
[2026-01-11 01:33:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-11 01:33:15] 
[2026-01-11 01:33:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-11 01:33:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-11 01:33:15] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-11 01:33:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-11 01:33:15] 
[2026-01-11 01:33:15] 2026-01-11 00:31:23,825 | INFO     | ***************************************
[2026-01-11 01:33:15] 2026-01-11 00:31:24,328 | INFO     | executing command: df -mP /scratch/boinc/var/slot64/slots/0
[2026-01-11 01:33:15] 2026-01-11 00:31:24,347 | INFO     | sufficient remaining disk space (694332424192 B)
[2026-01-11 01:33:15] 2026-01-11 00:31:24,347 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-11 01:33:15] 2026-01-11 00:31:24,347 | INFO     | current server update state: UPDATING_FINAL
[2026-01-11 01:33:15] 2026-01-11 00:31:24,347 | INFO     | update_server=False
[2026-01-11 01:33:15] 2026-01-11 00:31:24,348 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-11 01:33:15] 2026-01-11 00:31:24,390 | INFO     | all data control threads have been joined
[2026-01-11 01:33:15] 2026-01-11 00:31:24,938 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-11 01:33:15] 2026-01-11 00:31:24,938 | INFO     | aborting loop
[2026-01-11 01:33:15] 2026-01-11 00:31:25,085 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-11 01:33:15] 2026-01-11 00:31:25,290 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-11 01:33:15] 2026-01-11 00:31:25,353 | INFO     | [job] retrieve thread has finished
[2026-01-11 01:33:15] 2026-01-11 00:31:25,394 | INFO     | [data] control thread has finished
[2026-01-11 01:33:15] 2026-01-11 00:31:25,572 | INFO     | [payload] execute_payloads thread has finished
[2026-01-11 01:33:15] 2026-01-11 00:31:25,640 | INFO     | all payload control threads have been joined
[2026-01-11 01:33:15] 2026-01-11 00:31:25,891 | INFO     | all job control threads have been joined
[2026-01-11 01:33:15] 2026-01-11 00:31:25,943 | INFO     | [job] job monitor thread has finished
[2026-01-11 01:33:15] 2026-01-11 00:31:25,995 | INFO     | [payload] failed_post thread has finished
[2026-01-11 01:33:15] 2026-01-11 00:31:26,268 | INFO     | [job] validate thread has finished
[2026-01-11 01:33:15] 2026-01-11 00:31:26,543 | INFO     | [data] copytool_in thread has finished
[2026-01-11 01:33:15] 2026-01-11 00:31:26,613 | INFO     | [job] create_data_payload thread has finished
[2026-01-11 01:33:15] 2026-01-11 00:31:26,645 | INFO     | [payload] control thread has finished
[2026-01-11 01:33:15] 2026-01-11 00:31:26,654 | INFO     | [payload] validate_pre thread has finished
[2026-01-11 01:33:15] 2026-01-11 00:31:26,830 | INFO     | [payload] validate_post thread has finished
[2026-01-11 01:33:15] 2026-01-11 00:31:26,892 | INFO     | [job] control thread has finished
[2026-01-11 01:33:15] 2026-01-11 00:31:27,225 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-11 01:33:15] 2026-01-11 00:31:27,291 | INFO     | [data] copytool_out thread has finished
[2026-01-11 01:33:15] 2026-01-11 00:31:28,230 | INFO     | [job] queue monitor thread has finished
[2026-01-11 01:33:15] 2026-01-11 00:31:29,091 | INFO     | [data] queue_monitor thread has finished
[2026-01-11 01:33:15] 2026-01-11 00:31:35,318 | INFO     | job.realtimelogging is not enabled
[2026-01-11 01:33:15] 2026-01-11 00:31:36,323 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-11 01:33:15] 2026-01-11 00:31:55,620 | INFO     | PID=3460013 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-11 01:33:15] 2026-01-11 00:31:55,620 | INFO     | .. there are 4 such processes running
[2026-01-11 01:33:15] 2026-01-11 00:31:55,620 | INFO     | found 0 job(s) in 20 queues
[2026-01-11 01:33:15] 2026-01-11 00:31:55,620 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-11 01:33:15] 2026-01-11 00:31:55,620 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-11 01:33:15] 2026-01-11 00:32:04,929 | INFO     | [monitor] cgroup control has ended
[2026-01-11 01:33:15] 2026-01-11 00:32:05,079 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22801854097216)>', '<ExcThread(monitor, started 22801608034048)>']
[2026-01-11 01:33:15] 2026-01-11 00:32:05,666 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-11 01:33:15] 2026-01-11 00:32:05,666 | INFO     | [monitor] control thread has ended
[2026-01-11 01:33:15] 2026-01-11 00:32:10,105 | INFO     | all workflow threads have been joined
[2026-01-11 01:33:15] 2026-01-11 00:32:10,105 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-11 01:33:15] 2026-01-11 00:32:10,105 | INFO     | traces error code: 0
[2026-01-11 01:33:15] 2026-01-11 00:32:10,106 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-11 01:33:15] 2026-01-11 00:32:10,319 [wrapper] ==== pilot stdout END ====
[2026-01-11 01:33:15] 2026-01-11 00:32:10,322 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-11 01:33:15] 2026-01-11 00:32:10,325 [wrapper] pilotpid: 3460013
[2026-01-11 01:33:15] 2026-01-11 00:32:10,328 [wrapper] Pilot exit status: 0
[2026-01-11 01:33:15] 2026-01-11 00:32:10,340 [wrapper] pandaids: 6963148327
[2026-01-11 01:33:15] 2026-01-11 00:32:10,421 [wrapper] cleanup supervisor_pilot 3694974 3460014
[2026-01-11 01:33:15] 2026-01-11 00:32:10,424 [wrapper] Test setup, not cleaning
[2026-01-11 01:33:15] 2026-01-11 00:32:10,427 [wrapper] apfmon messages muted
[2026-01-11 01:33:15] 2026-01-11 00:32:10,430 [wrapper] ==== wrapper stdout END ====
[2026-01-11 01:33:15] 2026-01-11 00:32:10,433 [wrapper] ==== wrapper stderr END ====
[2026-01-11 01:33:15]  *** Error codes and diagnostics ***
[2026-01-11 01:33:15]     "exeErrorCode": 0,
[2026-01-11 01:33:15]     "exeErrorDiag": "",
[2026-01-11 01:33:15]     "pilotErrorCode": 0,
[2026-01-11 01:33:15]     "pilotErrorDiag": "",
[2026-01-11 01:33:15]  *** Listing of results directory ***
[2026-01-11 01:33:15] total 447092
[2026-01-11 01:33:15] -rw-r--r-- 1 boinc boinc      5112 Jan  8 17:02 queuedata.json
[2026-01-11 01:33:15] -rw-r--r-- 1 boinc boinc    579449 Jan  8 17:02 pilot3.tar.gz
[2026-01-11 01:33:15] -rwx------ 1 boinc boinc     36322 Jan  8 17:02 runpilot2-wrapper.sh
[2026-01-11 01:33:15] -rw-r--r-- 1 boinc boinc       100 Jan 10 21:24 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-11 01:33:15] -rwxr-xr-x 1 boinc boinc      7986 Jan 10 21:24 run_atlas
[2026-01-11 01:33:15] -rw-r--r-- 1 boinc boinc       105 Jan 10 21:24 job.xml
[2026-01-11 01:33:15] -rw-r--r-- 2 boinc boinc 225651727 Jan 10 21:24 EVNT.47898824._001105.pool.root.1
[2026-01-11 01:33:15] -rw-r--r-- 1 boinc boinc      6639 Jan 10 21:24 init_data.xml
[2026-01-11 01:33:15] drwxrwx--x 2 boinc boinc      4096 Jan 10 21:24 shared
[2026-01-11 01:33:15] -rw-r--r-- 2 boinc boinc    592395 Jan 10 21:24 input.tar.gz
[2026-01-11 01:33:15] -rw-r--r-- 2 boinc boinc     15847 Jan 10 21:24 start_atlas.sh
[2026-01-11 01:33:15] -rw-r--r-- 1 boinc boinc         0 Jan 10 21:24 boinc_lockfile
[2026-01-11 01:33:15] -rw-r--r-- 1 boinc boinc      2517 Jan 10 21:24 pandaJob.out
[2026-01-11 01:33:15] -rw------- 1 boinc boinc    989548 Jan 10 21:24 agis_schedconf.cvmfs.json
[2026-01-11 01:33:15] drwx------ 5 boinc boinc      4096 Jan 10 21:24 pilot3
[2026-01-11 01:33:15] -rw------- 1 boinc boinc 223284665 Jan 11 01:30 HITS.47898826._027998.pool.root.1
[2026-01-11 01:33:15] -rw-r--r-- 1 boinc boinc       528 Jan 11 01:30 boinc_task_state.xml
[2026-01-11 01:33:15] -rw------- 1 boinc boinc      1036 Jan 11 01:31 memory_monitor_summary.json
[2026-01-11 01:33:15] -rw------- 1 boinc boinc   1516240 Jan 11 01:31 agis_ddmendpoints.agis.ALL.json
[2026-01-11 01:33:15] -rw------- 1 boinc boinc    400136 Jan 11 01:31 log.47898826._027998.job.log.tgz.1
[2026-01-11 01:33:15] -rw------- 1 boinc boinc        95 Jan 11 01:31 pilot_heartbeat.json
[2026-01-11 01:33:15] -rw------- 1 boinc boinc      7831 Jan 11 01:31 heartbeat.json
[2026-01-11 01:33:15] -rw------- 1 boinc boinc      4905 Jan 11 01:32 pilotlog.txt
[2026-01-11 01:33:15] -rw------- 1 boinc boinc   2088412 Jan 11 01:32 log.47898826._027998.job.log.1
[2026-01-11 01:33:15] -rw------- 1 boinc boinc       357 Jan 11 01:32 output.list
[2026-01-11 01:33:15] -rw-r--r-- 1 boinc boinc       620 Jan 11 01:32 runtime_log
[2026-01-11 01:33:15] -rw------- 1 boinc boinc   2508800 Jan 11 01:32 result.tar.gz
[2026-01-11 01:33:15] -rw-r--r-- 1 boinc boinc      9206 Jan 11 01:32 runtime_log.err
[2026-01-11 01:33:15] -rw------- 1 boinc boinc       665 Jan 11 01:32 BO1NDm4d7x8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmLqkKDmkNYwXm.diag
[2026-01-11 01:33:15] -rw-r--r-- 1 boinc boinc        26 Jan 11 01:32 wrapper_checkpoint.txt
[2026-01-11 01:33:15] -rw-r--r-- 1 boinc boinc      8192 Jan 11 01:33 boinc_mmap_file
[2026-01-11 01:33:15] -rw-r--r-- 1 boinc boinc     21192 Jan 11 01:33 stderr.txt
[2026-01-11 01:33:15] HITS file was successfully produced:
[2026-01-11 01:33:15] -rw------- 1 boinc boinc 223284665 Jan 11 01:30 shared/HITS.pool.root.1
[2026-01-11 01:33:15]  *** Contents of shared directory: ***
[2026-01-11 01:33:15] total 441468
[2026-01-11 01:33:15] -rw-r--r-- 2 boinc boinc 225651727 Jan 10 21:24 ATLAS.root_0
[2026-01-11 01:33:15] -rw-r--r-- 2 boinc boinc    592395 Jan 10 21:24 input.tar.gz
[2026-01-11 01:33:15] -rw-r--r-- 2 boinc boinc     15847 Jan 10 21:24 start_atlas.sh
[2026-01-11 01:33:15] -rw------- 1 boinc boinc 223284665 Jan 11 01:30 HITS.pool.root.1
[2026-01-11 01:33:15] -rw------- 1 boinc boinc   2508800 Jan 11 01:32 result.tar.gz
01:33:17 (3456235): run_atlas exited; CPU time 58121.268872
01:33:17 (3456235): called boinc_finish(0)

</stderr_txt>
]]>

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