Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
23:45:38 (3946250): wrapper (7.7.26015): starting
23:45:38 (3946250): wrapper: running run_atlas (--nthreads 8)
[2026-01-08 23:45:38] Arguments: --nthreads 8
[2026-01-08 23:45:38] Threads: 8
[2026-01-08 23:45:38] Checking for CVMFS
[2026-01-08 23:45:39] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 23:45:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 23:45:40] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 23:45:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 23:45:41] 2.13.3.0 6437 22446 232520 154931 2 369 24604560 40960001 8412 16776704 0 17701422 99.610 18463460 41816 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-08 23:45:41] CVMFS is ok
[2026-01-08 23:45:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-08 23:45:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-08 23:45:41] Further information can be found at the LHC@home message board.
[2026-01-08 23:45:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 23:45:41] Checking for apptainer binary...
[2026-01-08 23:45:41] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-08 23:45:41] Running /usr/bin/apptainer --version
[2026-01-08 23:45:41] apptainer version 1.4.5-2.el9
[2026-01-08 23:45:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 23:45:42] c-210-31-4.aglt2.org
[2026-01-08 23:45:42] apptainer works
[2026-01-08 23:45:42] Set ATHENA_PROC_NUMBER=8
[2026-01-08 23:45:42] Set ATHENA_CORE_NUMBER=8
[2026-01-08 23:45:42] Starting ATLAS job with PandaID=6963077635
[2026-01-08 23:45:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 09:58:59]  *** The last 200 lines of the pilot log: ***
[2026-01-09 09:58:59] 2026-01-09 14:58:18,892 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-09 09:58:59] 2026-01-09 14:58:18,921 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 3004.3875178571434
[2026-01-09 09:58:59] 2026-01-09 14:58:19,020 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6963077635/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 09:58:59] 2026-01-09 14:58:19,021 | INFO     | extracted standard info from prmon json
[2026-01-09 09:58:59] 2026-01-09 14:58:19,021 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 09:58:59] 2026-01-09 14:58:19,021 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 09:58:59] 2026-01-09 14:58:19,052 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 09:58:59] 2026-01-09 14:58:19,052 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 09:58:59] 2026-01-09 14:58:19,132 | INFO     | fitting pss+swap vs Time
[2026-01-09 09:58:59] 2026-01-09 14:58:19,133 | INFO     | sum of square deviations: 66973715748.16017
[2026-01-09 09:58:59] 2026-01-09 14:58:19,208 | INFO     | sum of deviations: 576712361838.7207
[2026-01-09 09:58:59] 2026-01-09 14:58:19,208 | INFO     | mean x: 1767952384.08
[2026-01-09 09:58:59] 2026-01-09 14:58:19,208 | INFO     | mean y: 2457673.776666667
[2026-01-09 09:58:59] 2026-01-09 14:58:19,208 | INFO     | intersect: -15221425063.671467
[2026-01-09 09:58:59] 2026-01-09 14:58:19,245 | INFO     | chi2: 7.2405115864327305
[2026-01-09 09:58:59] 2026-01-09 14:58:19,246 | INFO     | sum of square deviations: 65313288426.46383
[2026-01-09 09:58:59] 2026-01-09 14:58:19,315 | INFO     | sum of deviations: 646299719791.4974
[2026-01-09 09:58:59] 2026-01-09 14:58:19,315 | INFO     | mean x: 1767952231.584874
[2026-01-09 09:58:59] 2026-01-09 14:58:19,315 | INFO     | mean y: 2464029.3663865547
[2026-01-09 09:58:59] 2026-01-09 14:58:19,316 | INFO     | intersect: -17492092735.518288
[2026-01-09 09:58:59] 2026-01-09 14:58:19,316 | INFO     | chi2: 5.860937653973797
[2026-01-09 09:58:59] 2026-01-09 14:58:19,316 | INFO     | current chi2=5.860937653973797 (change=19.05354222544135 %)
[2026-01-09 09:58:59] 2026-01-09 14:58:19,316 | INFO     | right removable region: 594
[2026-01-09 09:58:59] 2026-01-09 14:58:19,317 | INFO     | sum of square deviations: 65313076146.463905
[2026-01-09 09:58:59] 2026-01-09 14:58:19,400 | INFO     | sum of deviations: 394710322552.55945
[2026-01-09 09:58:59] 2026-01-09 14:58:19,401 | INFO     | mean x: 1767952536.584874
[2026-01-09 09:58:59] 2026-01-09 14:58:19,401 | INFO     | mean y: 2474377.662184874
[2026-01-09 09:58:59] 2026-01-09 14:58:19,401 | INFO     | intersect: -10681896304.988813
[2026-01-09 09:58:59] 2026-01-09 14:58:19,401 | INFO     | chi2: 3.839411017534391
[2026-01-09 09:58:59] 2026-01-09 14:58:19,402 | INFO     | current chi2=3.839411017534391 (change=46.973208015733604 %)
[2026-01-09 09:58:59] 2026-01-09 14:58:19,402 | INFO     | sum of square deviations: 63680220245.76275
[2026-01-09 09:58:59] 2026-01-09 14:58:19,471 | INFO     | sum of deviations: 272304282362.72925
[2026-01-09 09:58:59] 2026-01-09 14:58:19,472 | INFO     | mean x: 1767952689.0847456
[2026-01-09 09:58:59] 2026-01-09 14:58:19,472 | INFO     | mean y: 2485802.625423729
[2026-01-09 09:58:59] 2026-01-09 14:58:19,472 | INFO     | intersect: -7557492576.76017
[2026-01-09 09:58:59] 2026-01-09 14:58:19,473 | INFO     | chi2: 2.3906359912504103
[2026-01-09 09:58:59] 2026-01-09 14:58:19,473 | INFO     | current chi2=2.3906359912504103 (change=37.73430402912062 %)
[2026-01-09 09:58:59] 2026-01-09 14:58:19,473 | INFO     | sum of square deviations: 62074878822.39311
[2026-01-09 09:58:59] 2026-01-09 14:58:19,543 | INFO     | sum of deviations: 220114338291.36743
[2026-01-09 09:58:59] 2026-01-09 14:58:19,544 | INFO     | mean x: 1767952841.5811965
[2026-01-09 09:58:59] 2026-01-09 14:58:19,544 | INFO     | mean y: 2490751.560683761
[2026-01-09 09:58:59] 2026-01-09 14:58:19,544 | INFO     | intersect: -6266579397.869939
[2026-01-09 09:58:59] 2026-01-09 14:58:19,545 | INFO     | chi2: 2.1236871582766454
[2026-01-09 09:58:59] 2026-01-09 14:58:19,545 | INFO     | current chi2=2.1236871582766454 (change=11.166435791596133 %)
[2026-01-09 09:58:59] 2026-01-09 14:58:19,545 | INFO     | left removable region: 30
[2026-01-09 09:58:59] 2026-01-09 14:58:19,545 | INFO     | sum of square deviations: 55626721741.91467
[2026-01-09 09:58:59] 2026-01-09 14:58:19,619 | INFO     | sum of deviations: 151542570244.55325
[2026-01-09 09:58:59] 2026-01-09 14:58:19,619 | INFO     | mean x: 1767953116.0851064
[2026-01-09 09:58:59] 2026-01-09 14:58:19,619 | INFO     | mean y: 2511436.9468085105
[2026-01-09 09:58:59] 2026-01-09 14:58:19,619 | INFO     | intersect: -4813881672.221918
[2026-01-09 09:58:59] 2026-01-09 14:58:19,620 | INFO     | chi2: 0.1368209770297111
[2026-01-09 09:58:59] 2026-01-09 14:58:19,620 | INFO     | current memory leak: 2.72 B/s (using 564 data points, chi2=0.14)
[2026-01-09 09:58:59] 2026-01-09 14:58:19,621 | INFO     | could have reported an average CPU frequency of 2925 MHz (23 samples)
[2026-01-09 09:58:59] 2026-01-09 14:58:19,657 | INFO     | ..............................
[2026-01-09 09:58:59] 2026-01-09 14:58:19,657 | INFO     | . Timing measurements:
[2026-01-09 09:58:59] 2026-01-09 14:58:19,657 | INFO     | . get job = 0 s
[2026-01-09 09:58:59] 2026-01-09 14:58:19,657 | INFO     | . initial setup = 4 s
[2026-01-09 09:58:59] 2026-01-09 14:58:19,657 | INFO     | . payload setup = 36 s
[2026-01-09 09:58:59] 2026-01-09 14:58:19,658 | INFO     | . stage-in = 0 s
[2026-01-09 09:58:59] 2026-01-09 14:58:19,658 | INFO     | . payload execution = 36566 s
[2026-01-09 09:58:59] 2026-01-09 14:58:19,658 | INFO     | . stage-out = 4 s
[2026-01-09 09:58:59] 2026-01-09 14:58:19,658 | INFO     | . log creation = 0 s
[2026-01-09 09:58:59] 2026-01-09 14:58:19,658 | INFO     | ..............................
[2026-01-09 09:58:59] 2026-01-09 14:58:20,993 | INFO     | 
[2026-01-09 09:58:59] 2026-01-09 14:58:20,993 | INFO     | job summary report
[2026-01-09 09:58:59] 2026-01-09 14:58:20,993 | INFO     | --------------------------------------------------
[2026-01-09 09:58:59] 2026-01-09 14:58:20,993 | INFO     | PanDA job id: 6963077635
[2026-01-09 09:58:59] 2026-01-09 14:58:20,993 | INFO     | task id: 47898826
[2026-01-09 09:58:59] 2026-01-09 14:58:20,993 | INFO     | errors: (none)
[2026-01-09 09:58:59] 2026-01-09 14:58:20,994 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 09:58:59] 2026-01-09 14:58:20,994 | INFO     | pilot state: finished 
[2026-01-09 09:58:59] 2026-01-09 14:58:20,994 | INFO     | transexitcode: 0
[2026-01-09 09:58:59] 2026-01-09 14:58:20,994 | INFO     | exeerrorcode: 0
[2026-01-09 09:58:59] 2026-01-09 14:58:20,994 | INFO     | exeerrordiag: 
[2026-01-09 09:58:59] 2026-01-09 14:58:20,994 | INFO     | exitcode: 0
[2026-01-09 09:58:59] 2026-01-09 14:58:20,994 | INFO     | exitmsg: OK
[2026-01-09 09:58:59] 2026-01-09 14:58:20,994 | INFO     | cpuconsumptiontime: 56631 s
[2026-01-09 09:58:59] 2026-01-09 14:58:20,994 | INFO     | nevents: 400
[2026-01-09 09:58:59] 2026-01-09 14:58:20,994 | INFO     | neventsw: 0
[2026-01-09 09:58:59] 2026-01-09 14:58:20,994 | INFO     | pid: 3958578
[2026-01-09 09:58:59] 2026-01-09 14:58:20,994 | INFO     | pgrp: 3958578
[2026-01-09 09:58:59] 2026-01-09 14:58:20,994 | INFO     | corecount: 8
[2026-01-09 09:58:59] 2026-01-09 14:58:20,994 | INFO     | event service: False
[2026-01-09 09:58:59] 2026-01-09 14:58:20,994 | INFO     | sizes: {0: 2283742, 1: 2283997, 2: 2283997, 12: 2284025, 23: 2284053, 28: 2284343, 34: 2284499, 36607: 2325213, 36612: 2334211, 36613: 2334267, 36649: 2334461}
[2026-01-09 09:58:59] 2026-01-09 14:58:20,995 | INFO     | --------------------------------------------------
[2026-01-09 09:58:59] 2026-01-09 14:58:20,995 | INFO     | 
[2026-01-09 09:58:59] 2026-01-09 14:58:20,995 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-01-09 09:58:59] 2026-01-09 14:58:21,125 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 09:58:59] 2026-01-09 14:58:21,126 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 09:58:59] 2026-01-09 14:58:21,126 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 09:58:59] 2026-01-09 14:58:21,126 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 09:58:59] 2026-01-09 14:58:21,126 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 09:58:59] 2026-01-09 14:58:21,126 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 09:58:59] 2026-01-09 14:58:21,126 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 09:58:59] 2026-01-09 14:58:21,126 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 09:58:59] 2026-01-09 14:58:21,126 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 09:58:59] 2026-01-09 14:58:21,126 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 09:58:59] 2026-01-09 14:58:21,126 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 09:58:59] 2026-01-09 14:58:21,126 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 09:58:59] 2026-01-09 14:58:21,126 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 09:58:59] 2026-01-09 14:58:21,127 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 09:58:59] 2026-01-09 14:58:21,127 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 09:58:59] 2026-01-09 14:58:21,127 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 09:58:59] 2026-01-09 14:58:21,127 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 09:58:59] 2026-01-09 14:58:21,127 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 09:58:59] 2026-01-09 14:58:21,127 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 09:58:59] 2026-01-09 14:58:21,127 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 09:58:59] 2026-01-09 14:58:21,127 | INFO     | job 6963077635 has completed (purged errors)
[2026-01-09 09:58:59] 2026-01-09 14:58:21,127 | INFO     | overall cleanup function is called
[2026-01-09 09:58:59] 2026-01-09 14:58:22,148 | INFO     | --- collectZombieJob: --- 10, [3958578]
[2026-01-09 09:58:59] 2026-01-09 14:58:22,148 | INFO     | zombie collector waiting for pid 3958578
[2026-01-09 09:58:59] 2026-01-09 14:58:22,148 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 09:58:59] 2026-01-09 14:58:22,148 | INFO     | collected zombie processes
[2026-01-09 09:58:59] 2026-01-09 14:58:22,148 | INFO     | will attempt to kill all subprocesses of pid=3958578
[2026-01-09 09:58:59] 2026-01-09 14:58:22,947 | INFO     | PID=3950069 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 09:58:59] 2026-01-09 14:58:22,948 | INFO     | .. there are 10 such processes running
[2026-01-09 09:58:59] 2026-01-09 14:58:23,117 | INFO     | process IDs to be killed: [3958578] (in reverse order)
[2026-01-09 09:58:59] 2026-01-09 14:58:23,531 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 09:58:59] 2026-01-09 14:58:23,531 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 09:58:59] 2026-01-09 14:58:23,569 | INFO     | did not find any defunct processes belonging to 3958578
[2026-01-09 09:58:59] 2026-01-09 14:58:23,586 | INFO     | did not find any defunct processes belonging to 3958578
[2026-01-09 09:58:59] 2026-01-09 14:58:23,586 | INFO     | ready for new job
[2026-01-09 09:58:59] 2026-01-09 14:58:23,586 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 09:58:59] 2026-01-09 14:58:23,593 | INFO     | ***************************************
[2026-01-09 09:58:59] 2026-01-09 14:58:23,593 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 09:58:59] 2026-01-09 14:58:23,593 | INFO     | ***************************************
[2026-01-09 09:58:59] 2026-01-09 14:58:23,594 | INFO     | 
[2026-01-09 09:58:59] 2026-01-09 14:58:23,601 | INFO     | architecture information:
[2026-01-09 09:58:59] 2026-01-09 14:58:23,601 | INFO     | executing command: cat /etc/os-release
[2026-01-09 09:58:59] 2026-01-09 14:58:23,718 | INFO     | cat /etc/os-release:
[2026-01-09 09:58:59] NAME="CentOS Linux"
[2026-01-09 09:58:59] VERSION="7 (Core)"
[2026-01-09 09:58:59] ID="centos"
[2026-01-09 09:58:59] ID_LIKE="rhel fedora"
[2026-01-09 09:58:59] VERSION_ID="7"
[2026-01-09 09:58:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 09:58:59] ANSI_COLOR="0;31"
[2026-01-09 09:58:59] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 09:58:59] HOME_URL="https://www.centos.org/"
[2026-01-09 09:58:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 09:58:59] 
[2026-01-09 09:58:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 09:58:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 09:58:59] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 09:58:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 09:58:59] 
[2026-01-09 09:58:59] 2026-01-09 14:58:23,719 | INFO     | ***************************************
[2026-01-09 09:58:59] 2026-01-09 14:58:24,221 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-01-09 09:58:59] 2026-01-09 14:58:24,402 | INFO     | sufficient remaining disk space (74102865920 B)
[2026-01-09 09:58:59] 2026-01-09 14:58:24,403 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 09:58:59] 2026-01-09 14:58:24,403 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 09:58:59] 2026-01-09 14:58:24,403 | INFO     | update_server=False
[2026-01-09 09:58:59] 2026-01-09 14:58:24,403 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 09:58:59] 2026-01-09 14:58:24,406 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 09:58:59] 2026-01-09 14:58:24,406 | INFO     | aborting loop
[2026-01-09 09:58:59] 2026-01-09 14:58:24,591 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 09:58:59] 2026-01-09 14:58:24,919 | INFO     | all job control threads have been joined
[2026-01-09 09:58:59] 2026-01-09 14:58:25,154 | INFO     | all data control threads have been joined
[2026-01-09 09:58:59] 2026-01-09 14:58:25,412 | INFO     | [job] job monitor thread has finished
[2026-01-09 09:58:59] 2026-01-09 14:58:25,424 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 09:58:59] 2026-01-09 14:58:25,437 | INFO     | [job] retrieve thread has finished
[2026-01-09 09:58:59] 2026-01-09 14:58:25,487 | INFO     | [payload] validate_post thread has finished
[2026-01-09 09:58:59] 2026-01-09 14:58:25,652 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 09:58:59] 2026-01-09 14:58:25,825 | INFO     | all payload control threads have been joined
[2026-01-09 09:58:59] 2026-01-09 14:58:25,925 | INFO     | [job] control thread has finished
[2026-01-09 09:58:59] 2026-01-09 14:58:25,960 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 09:58:59] 2026-01-09 14:58:26,058 | INFO     | [job] validate thread has finished
[2026-01-09 09:58:59] 2026-01-09 14:58:26,093 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 09:58:59] 2026-01-09 14:58:26,119 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 09:58:59] 2026-01-09 14:58:26,160 | INFO     | [data] control thread has finished
[2026-01-09 09:58:59] 2026-01-09 14:58:26,601 | INFO     | [data] copytool_out thread has finished
[2026-01-09 09:58:59] 2026-01-09 14:58:26,747 | INFO     | [data] copytool_in thread has finished
[2026-01-09 09:58:59] 2026-01-09 14:58:26,797 | INFO     | [payload] failed_post thread has finished
[2026-01-09 09:58:59] 2026-01-09 14:58:26,832 | INFO     | [payload] control thread has finished
[2026-01-09 09:58:59] 2026-01-09 14:58:26,966 | INFO     | [job] queue monitor thread has finished
[2026-01-09 09:58:59] 2026-01-09 14:58:27,120 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 09:58:59] 2026-01-09 14:58:31,129 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 09:58:59] 2026-01-09 14:58:38,706 | INFO     | [monitor] cgroup control has ended
[2026-01-09 09:58:59] 2026-01-09 14:58:40,091 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139925496088384)>', '<ExcThread(monitor, started 139925135554304)>']
[2026-01-09 09:58:59] 2026-01-09 14:58:45,117 | INFO     | all workflow threads have been joined
[2026-01-09 09:58:59] 2026-01-09 14:58:45,117 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 09:58:59] 2026-01-09 14:58:45,117 | INFO     | traces error code: 0
[2026-01-09 09:58:59] 2026-01-09 14:58:45,118 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 09:58:59] 2026-01-09 14:58:57,824 | INFO     | PID=3950069 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 09:58:59] 2026-01-09 14:58:57,824 | INFO     | .. there are 10 such processes running
[2026-01-09 09:58:59] 2026-01-09 14:58:57,825 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 09:58:59] 2026-01-09 14:58:57,825 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 09:58:59] 2026-01-09 14:58:57,825 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 09:58:59] 2026-01-09 14:58:57,825 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 09:58:59] 2026-01-09 14:58:57,825 | INFO     | [monitor] control thread has ended
[2026-01-09 09:58:59] 2026-01-09 14:58:57,967 [wrapper] ==== pilot stdout END ====
[2026-01-09 09:58:59] 2026-01-09 14:58:57,977 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 09:58:59] 2026-01-09 14:58:58,214 [wrapper] pilotpid: 3950069
[2026-01-09 09:58:59] 2026-01-09 14:58:58,229 [wrapper] Pilot exit status: 0
[2026-01-09 09:58:59] 2026-01-09 14:58:58,335 [wrapper] pandaids: 6963077635
[2026-01-09 09:58:59] 2026-01-09 14:58:58,426 [wrapper] cleanup supervisor_pilot  895937 3950070
[2026-01-09 09:58:59] 2026-01-09 14:58:58,457 [wrapper] Test setup, not cleaning
[2026-01-09 09:58:59] 2026-01-09 14:58:58,484 [wrapper] apfmon messages muted
[2026-01-09 09:58:59] 2026-01-09 14:58:58,495 [wrapper] ==== wrapper stdout END ====
[2026-01-09 09:58:59] 2026-01-09 14:58:58,541 [wrapper] ==== wrapper stderr END ====
[2026-01-09 09:58:59]  *** Error codes and diagnostics ***
[2026-01-09 09:58:59]     "exeErrorCode": 0,
[2026-01-09 09:58:59]     "exeErrorDiag": "",
[2026-01-09 09:58:59]     "pilotErrorCode": 0,
[2026-01-09 09:58:59]     "pilotErrorDiag": "",
[2026-01-09 09:58:59]  *** Listing of results directory ***
[2026-01-09 09:58:59] total 446476
[2026-01-09 09:58:59] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 06:09 pilot3.tar.gz
[2026-01-09 09:58:59] -rwx------. 1 boincer umatlas     36322 Jan  8 06:10 runpilot2-wrapper.sh
[2026-01-09 09:58:59] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 06:14 queuedata.json
[2026-01-09 09:58:59] -rw-r--r--. 1 boincer umatlas       100 Jan  8 23:45 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 09:58:59] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  8 23:45 run_atlas
[2026-01-09 09:58:59] -rw-r--r--. 1 boincer umatlas       105 Jan  8 23:45 job.xml
[2026-01-09 09:58:59] -rw-r--r--. 2 boincer umatlas 222028810 Jan  8 23:45 EVNT.47898824._000992.pool.root.1
[2026-01-09 09:58:59] -rw-r--r--. 2 boincer umatlas     15847 Jan  8 23:45 start_atlas.sh
[2026-01-09 09:58:59] drwxrwx--x. 2 boincer umatlas      4096 Jan  8 23:45 shared
[2026-01-09 09:58:59] -rw-r--r--. 2 boincer umatlas    592398 Jan  8 23:45 input.tar.gz
[2026-01-09 09:58:59] -rw-r--r--. 1 boincer umatlas         0 Jan  8 23:45 boinc_lockfile
[2026-01-09 09:58:59] -rw-r--r--. 1 boincer umatlas      2519 Jan  8 23:45 pandaJob.out
[2026-01-09 09:58:59] -rw-------. 1 boincer umatlas        57 Jan  8 23:45 setup.sh.local
[2026-01-09 09:58:59] -rw-------. 1 boincer umatlas    989771 Jan  8 23:46 agis_schedconf.cvmfs.json
[2026-01-09 09:58:59] drwx------. 5 boincer umatlas      4096 Jan  8 23:46 pilot3
[2026-01-09 09:58:59] -rw-------. 1 boincer umatlas 220578935 Jan  9 09:55 HITS.47898826._024290.pool.root.1
[2026-01-09 09:58:59] -rw-r--r--. 1 boincer umatlas       531 Jan  9 09:55 boinc_task_state.xml
[2026-01-09 09:58:59] -rw-r--r--. 1 boincer umatlas      6844 Jan  9 09:56 init_data.xml
[2026-01-09 09:58:59] -rw-------. 1 boincer umatlas      1040 Jan  9 09:57 memory_monitor_summary.json
[2026-01-09 09:58:59] -rw-------. 1 boincer umatlas   1516240 Jan  9 09:57 agis_ddmendpoints.agis.ALL.json
[2026-01-09 09:58:59] -rw-------. 1 boincer umatlas    745527 Jan  9 09:57 log.47898826._024290.job.log.tgz.1
[2026-01-09 09:58:59] -rw-------. 1 boincer umatlas      7824 Jan  9 09:58 heartbeat.json
[2026-01-09 09:58:59] -rw-r--r--. 1 boincer umatlas        28 Jan  9 09:58 wrapper_checkpoint.txt
[2026-01-09 09:58:59] -rw-r--r--. 1 boincer umatlas      8192 Jan  9 09:58 boinc_mmap_file
[2026-01-09 09:58:59] -rw-------. 1 boincer umatlas        95 Jan  9 09:58 pilot_heartbeat.json
[2026-01-09 09:58:59] -rw-------. 1 boincer umatlas       823 Jan  9 09:58 pilotlog.txt
[2026-01-09 09:58:59] -rw-------. 1 boincer umatlas   4586651 Jan  9 09:58 log.47898826._024290.job.log.1
[2026-01-09 09:58:59] -rw-------. 1 boincer umatlas       357 Jan  9 09:58 output.list
[2026-01-09 09:58:59] -rw-r--r--. 1 boincer umatlas       620 Jan  9 09:58 runtime_log
[2026-01-09 09:58:59] -rw-------. 1 boincer umatlas   5355520 Jan  9 09:58 result.tar.gz
[2026-01-09 09:58:59] -rw-------. 1 boincer umatlas       659 Jan  9 09:58 TuvMDmX52x8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmnOkKDm8q8g8m.diag
[2026-01-09 09:58:59] -rw-r--r--. 1 boincer umatlas      9353 Jan  9 09:58 runtime_log.err
[2026-01-09 09:58:59] -rw-r--r--. 1 boincer umatlas     21294 Jan  9 09:58 stderr.txt
[2026-01-09 09:58:59] HITS file was successfully produced:
[2026-01-09 09:58:59] -rw-------. 1 boincer umatlas 220578935 Jan  9 09:55 shared/HITS.pool.root.1
[2026-01-09 09:58:59]  *** Contents of shared directory: ***
[2026-01-09 09:58:59] total 438072
[2026-01-09 09:58:59] -rw-r--r--. 2 boincer umatlas 222028810 Jan  8 23:45 ATLAS.root_0
[2026-01-09 09:58:59] -rw-r--r--. 2 boincer umatlas     15847 Jan  8 23:45 start_atlas.sh
[2026-01-09 09:58:59] -rw-r--r--. 2 boincer umatlas    592398 Jan  8 23:45 input.tar.gz
[2026-01-09 09:58:59] -rw-------. 1 boincer umatlas 220578935 Jan  9 09:55 HITS.pool.root.1
[2026-01-09 09:58:59] -rw-------. 1 boincer umatlas   5355520 Jan  9 09:58 result.tar.gz
09:59:00 (3946250): run_atlas exited; CPU time 57646.861673
09:59:00 (3946250): called boinc_finish(0)

</stderr_txt>
]]>

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