Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:46:37 (32668): wrapper (7.7.26015): starting
06:46:37 (32668): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 06:46:37] Arguments: --nthreads 8
[2026-01-09 06:46:37] Threads: 8
[2026-01-09 06:46:37] Checking for CVMFS
[2026-01-09 06:46:37] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 06:46:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 06:46:37] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 06:46:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 06:46:38] 2.11.2.0 16377 34991 96808 154933 0 57 20835084 25165825 0 130560 0 15139605 99.828 8975657 2144 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-09 06:46:38] CVMFS is ok
[2026-01-09 06:46:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 06:46:38] Checking for apptainer binary...
[2026-01-09 06:46:38] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 06:46:38] Running /usr/bin/apptainer --version
[2026-01-09 06:46:38] apptainer version 1.3.2-1.el7
[2026-01-09 06:46:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 06:46:39] cg-vwn414.simple-grid.lan
[2026-01-09 06:46:39] apptainer works
[2026-01-09 06:46:39] Set ATHENA_PROC_NUMBER=8
[2026-01-09 06:46:39] Set ATHENA_CORE_NUMBER=8
[2026-01-09 06:46:39] Starting ATLAS job with PandaID=6963148898
[2026-01-09 06:46:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 09:38:17]  *** The last 200 lines of the pilot log: ***
[2026-01-09 09:38:17] 2026-01-09 08:37:17,768 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-09 09:38:17] 2026-01-09 08:37:17,790 | INFO     | time since job start (10222s) is within the limit (349056.0s)
[2026-01-09 09:38:17] 2026-01-09 08:37:18,669 | INFO     | monitor loop #690: job 0:6963148898 is in state 'finished'
[2026-01-09 09:38:17] 2026-01-09 08:37:18,669 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 09:38:17] 2026-01-09 08:37:19,795 | INFO     | time since job start (10224s) is within the limit (349056.0s)
[2026-01-09 09:38:17] 2026-01-09 08:37:21,172 | INFO     | monitor loop #691: job 0:6963148898 is in state 'finished'
[2026-01-09 09:38:17] 2026-01-09 08:37:21,172 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 09:38:17] 2026-01-09 08:37:21,801 | INFO     | time since job start (10226s) is within the limit (349056.0s)
[2026-01-09 09:38:17] 2026-01-09 08:37:22,793 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 09:38:17] 2026-01-09 08:37:22,795 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2026-01-09 09:38:17] 2026-01-09 08:37:22,797 | INFO     | using path: /var/lib/boinc/slots/7/PanDA_Pilot-6963148898/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 09:38:17] 2026-01-09 08:37:22,797 | INFO     | extracted standard info from prmon json
[2026-01-09 09:38:17] 2026-01-09 08:37:22,798 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 09:38:17] 2026-01-09 08:37:22,798 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 09:38:17] 2026-01-09 08:37:22,798 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 09:38:17] 2026-01-09 08:37:22,798 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 09:38:17] 2026-01-09 08:37:22,802 | INFO     | fitting pss+swap vs Time
[2026-01-09 09:38:17] 2026-01-09 08:37:22,803 | INFO     | sum of square deviations: 1444149868.0
[2026-01-09 09:38:17] 2026-01-09 08:37:22,804 | INFO     | sum of deviations: 10289296146.000008
[2026-01-09 09:38:17] 2026-01-09 08:37:22,804 | INFO     | mean x: 1767942710.0
[2026-01-09 09:38:17] 2026-01-09 08:37:22,804 | INFO     | mean y: 2504022.8083832334
[2026-01-09 09:38:17] 2026-01-09 08:37:22,804 | INFO     | intersect: -12593755212.768272
[2026-01-09 09:38:17] 2026-01-09 08:37:22,805 | INFO     | chi2: 1.623088786432003
[2026-01-09 09:38:17] 2026-01-09 08:37:22,805 | INFO     | sum of square deviations: 1318277740.5
[2026-01-09 09:38:17] 2026-01-09 08:37:22,806 | INFO     | sum of deviations: 10016021849.499998
[2026-01-09 09:38:17] 2026-01-09 08:37:22,806 | INFO     | mean x: 1767942557.5
[2026-01-09 09:38:17] 2026-01-09 08:37:22,807 | INFO     | mean y: 2503691.635802469
[2026-01-09 09:38:17] 2026-01-09 08:37:22,807 | INFO     | intersect: -13429985335.953074
[2026-01-09 09:38:17] 2026-01-09 08:37:22,807 | INFO     | chi2: 1.6244532632571993
[2026-01-09 09:38:17] 2026-01-09 08:37:22,807 | INFO     | current chi2=1.6244532632571993 (change=-0.08406667808948737 %)
[2026-01-09 09:38:17] 2026-01-09 08:37:22,808 | INFO     | right removable region: 161
[2026-01-09 09:38:17] 2026-01-09 08:37:22,808 | INFO     | sum of square deviations: 1318277740.5
[2026-01-09 09:38:17] 2026-01-09 08:37:22,809 | INFO     | sum of deviations: -14856564243.499998
[2026-01-09 09:38:17] 2026-01-09 08:37:22,809 | INFO     | mean x: 1767942862.5
[2026-01-09 09:38:17] 2026-01-09 08:37:22,809 | INFO     | mean y: 2534062.2407407407
[2026-01-09 09:38:17] 2026-01-09 08:37:22,809 | INFO     | intersect: 19926678958.752808
[2026-01-09 09:38:17] 2026-01-09 08:37:22,810 | INFO     | chi2: 0.1547617906526285
[2026-01-09 09:38:17] 2026-01-09 08:37:22,810 | INFO     | current chi2=0.1547617906526285 (change=90.46498306523098 %)
[2026-01-09 09:38:17] 2026-01-09 08:37:22,810 | INFO     | sum of square deviations: 1199940638.0
[2026-01-09 09:38:17] 2026-01-09 08:37:22,811 | INFO     | sum of deviations: -16336601112.999998
[2026-01-09 09:38:17] 2026-01-09 08:37:22,812 | INFO     | mean x: 1767943015.0
[2026-01-09 09:38:17] 2026-01-09 08:37:22,812 | INFO     | mean y: 2535924.7834394905
[2026-01-09 09:38:17] 2026-01-09 08:37:22,812 | INFO     | intersect: 24072209800.24191
[2026-01-09 09:38:17] 2026-01-09 08:37:22,812 | INFO     | chi2: 0.13344521580110663
[2026-01-09 09:38:17] 2026-01-09 08:37:22,812 | INFO     | current chi2=0.13344521580110663 (change=13.773796982853542 %)
[2026-01-09 09:38:17] 2026-01-09 08:37:22,813 | INFO     | left removable region: 20
[2026-01-09 09:38:17] 2026-01-09 08:37:22,813 | INFO     | sum of square deviations: 869188390.0
[2026-01-09 09:38:17] 2026-01-09 08:37:22,814 | INFO     | sum of deviations: -5716588281.999999
[2026-01-09 09:38:17] 2026-01-09 08:37:22,814 | INFO     | mean x: 1767943137.0
[2026-01-09 09:38:17] 2026-01-09 08:37:22,814 | INFO     | mean y: 2521301.9787234045
[2026-01-09 09:38:17] 2026-01-09 08:37:22,814 | INFO     | intersect: 11630153627.137276
[2026-01-09 09:38:17] 2026-01-09 08:37:22,815 | INFO     | chi2: 0.08610665659508093
[2026-01-09 09:38:17] 2026-01-09 08:37:22,815 | INFO     | current memory leak: -6.58 B/s (using 141 data points, chi2=0.09)
[2026-01-09 09:38:17] 2026-01-09 08:37:22,816 | INFO     | could have reported an average CPU frequency of 1999 MHz (9 samples)
[2026-01-09 09:38:17] 2026-01-09 08:37:22,816 | INFO     | ..............................
[2026-01-09 09:38:17] 2026-01-09 08:37:22,816 | INFO     | . Timing measurements:
[2026-01-09 09:38:17] 2026-01-09 08:37:22,816 | INFO     | . get job = 0 s
[2026-01-09 09:38:17] 2026-01-09 08:37:22,817 | INFO     | . initial setup = 1 s
[2026-01-09 09:38:17] 2026-01-09 08:37:22,817 | INFO     | . payload setup = 7 s
[2026-01-09 09:38:17] 2026-01-09 08:37:22,817 | INFO     | . stage-in = 0 s
[2026-01-09 09:38:17] 2026-01-09 08:37:22,817 | INFO     | . payload execution = 10191 s
[2026-01-09 09:38:17] 2026-01-09 08:37:22,817 | INFO     | . stage-out = 1 s
[2026-01-09 09:38:17] 2026-01-09 08:37:22,817 | INFO     | . log creation = 0 s
[2026-01-09 09:38:17] 2026-01-09 08:37:22,817 | INFO     | ..............................
[2026-01-09 09:38:17] 2026-01-09 08:37:23,015 | INFO     | PID=4003 has CPU usage=8.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-09 09:38:17] 2026-01-09 08:37:23,211 | INFO     | 
[2026-01-09 09:38:17] 2026-01-09 08:37:23,211 | INFO     | job summary report
[2026-01-09 09:38:17] 2026-01-09 08:37:23,211 | INFO     | --------------------------------------------------
[2026-01-09 09:38:17] 2026-01-09 08:37:23,212 | INFO     | PanDA job id: 6963148898
[2026-01-09 09:38:17] 2026-01-09 08:37:23,212 | INFO     | task id: 47898826
[2026-01-09 09:38:17] 2026-01-09 08:37:23,212 | INFO     | errors: (none)
[2026-01-09 09:38:17] 2026-01-09 08:37:23,212 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 09:38:17] 2026-01-09 08:37:23,212 | INFO     | pilot state: finished 
[2026-01-09 09:38:17] 2026-01-09 08:37:23,212 | INFO     | transexitcode: 0
[2026-01-09 09:38:17] 2026-01-09 08:37:23,212 | INFO     | exeerrorcode: 0
[2026-01-09 09:38:17] 2026-01-09 08:37:23,212 | INFO     | exeerrordiag: 
[2026-01-09 09:38:17] 2026-01-09 08:37:23,212 | INFO     | exitcode: 0
[2026-01-09 09:38:17] 2026-01-09 08:37:23,213 | INFO     | exitmsg: OK
[2026-01-09 09:38:17] 2026-01-09 08:37:23,213 | INFO     | cpuconsumptiontime: 76695 s
[2026-01-09 09:38:17] 2026-01-09 08:37:23,213 | INFO     | nevents: 400
[2026-01-09 09:38:17] 2026-01-09 08:37:23,213 | INFO     | neventsw: 0
[2026-01-09 09:38:17] 2026-01-09 08:37:23,213 | INFO     | pid: 10444
[2026-01-09 09:38:17] 2026-01-09 08:37:23,213 | INFO     | pgrp: 10444
[2026-01-09 09:38:17] 2026-01-09 08:37:23,213 | INFO     | corecount: 8
[2026-01-09 09:38:17] 2026-01-09 08:37:23,213 | INFO     | event service: False
[2026-01-09 09:38:17] 2026-01-09 08:37:23,213 | INFO     | sizes: {0: 2283800, 1: 2283999, 6: 2284261, 11: 2284289, 10202: 2312724, 10204: 2321722, 10205: 2321906, 10211: 2322164}
[2026-01-09 09:38:17] 2026-01-09 08:37:23,214 | INFO     | --------------------------------------------------
[2026-01-09 09:38:17] 2026-01-09 08:37:23,214 | INFO     | 
[2026-01-09 09:38:17] 2026-01-09 08:37:23,214 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2026-01-09 09:38:17] 2026-01-09 08:37:23,238 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 09:38:17] 2026-01-09 08:37:23,238 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 09:38:17] 2026-01-09 08:37:23,239 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 09:38:17] 2026-01-09 08:37:23,239 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 09:38:17] 2026-01-09 08:37:23,239 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 09:38:17] 2026-01-09 08:37:23,239 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 09:38:17] 2026-01-09 08:37:23,239 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 09:38:17] 2026-01-09 08:37:23,239 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 09:38:17] 2026-01-09 08:37:23,239 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 09:38:17] 2026-01-09 08:37:23,239 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 09:38:17] 2026-01-09 08:37:23,240 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 09:38:17] 2026-01-09 08:37:23,240 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 09:38:17] 2026-01-09 08:37:23,240 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 09:38:17] 2026-01-09 08:37:23,240 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 09:38:17] 2026-01-09 08:37:23,240 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 09:38:17] 2026-01-09 08:37:23,240 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 09:38:17] 2026-01-09 08:37:23,240 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 09:38:17] 2026-01-09 08:37:23,240 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 09:38:17] 2026-01-09 08:37:23,240 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 09:38:17] 2026-01-09 08:37:23,241 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 09:38:17] 2026-01-09 08:37:23,241 | INFO     | job 6963148898 has completed (purged errors)
[2026-01-09 09:38:17] 2026-01-09 08:37:23,241 | INFO     | overall cleanup function is called
[2026-01-09 09:38:17] 2026-01-09 08:37:24,249 | INFO     | --- collectZombieJob: --- 10, [10444]
[2026-01-09 09:38:17] 2026-01-09 08:37:24,250 | INFO     | zombie collector waiting for pid 10444
[2026-01-09 09:38:17] 2026-01-09 08:37:24,250 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 09:38:17] 2026-01-09 08:37:24,250 | INFO     | collected zombie processes
[2026-01-09 09:38:17] 2026-01-09 08:37:24,250 | INFO     | will attempt to kill all subprocesses of pid=10444
[2026-01-09 09:38:17] 2026-01-09 08:37:24,313 | INFO     | process IDs to be killed: [10444] (in reverse order)
[2026-01-09 09:38:17] 2026-01-09 08:37:24,375 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 09:38:17] 2026-01-09 08:37:24,375 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 09:38:17] 2026-01-09 08:37:24,377 | INFO     | did not find any defunct processes belonging to 10444
[2026-01-09 09:38:17] 2026-01-09 08:37:24,379 | INFO     | did not find any defunct processes belonging to 10444
[2026-01-09 09:38:17] 2026-01-09 08:37:24,379 | INFO     | ready for new job
[2026-01-09 09:38:17] 2026-01-09 08:37:24,380 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 09:38:17] 2026-01-09 08:37:24,381 | INFO     | ***************************************
[2026-01-09 09:38:17] 2026-01-09 08:37:24,382 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 09:38:17] 2026-01-09 08:37:24,382 | INFO     | ***************************************
[2026-01-09 09:38:17] 2026-01-09 08:37:24,382 | INFO     | 
[2026-01-09 09:38:17] 2026-01-09 08:37:24,383 | INFO     | pilot is running in a VM
[2026-01-09 09:38:17] 2026-01-09 08:37:24,383 | INFO     | architecture information:
[2026-01-09 09:38:17] 2026-01-09 08:37:24,383 | INFO     | executing command: cat /etc/os-release
[2026-01-09 09:38:17] 2026-01-09 08:37:24,404 | INFO     | cat /etc/os-release:
[2026-01-09 09:38:17] NAME="CentOS Linux"
[2026-01-09 09:38:17] VERSION="7 (Core)"
[2026-01-09 09:38:17] ID="centos"
[2026-01-09 09:38:17] ID_LIKE="rhel fedora"
[2026-01-09 09:38:17] VERSION_ID="7"
[2026-01-09 09:38:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 09:38:17] ANSI_COLOR="0;31"
[2026-01-09 09:38:17] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 09:38:17] HOME_URL="https://www.centos.org/"
[2026-01-09 09:38:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 09:38:17] 
[2026-01-09 09:38:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 09:38:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 09:38:17] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 09:38:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 09:38:17] 
[2026-01-09 09:38:17] 2026-01-09 08:37:24,404 | INFO     | ***************************************
[2026-01-09 09:38:17] 2026-01-09 08:37:24,908 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2026-01-09 09:38:17] 2026-01-09 08:37:24,927 | INFO     | sufficient remaining disk space (498105057280 B)
[2026-01-09 09:38:17] 2026-01-09 08:37:24,928 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 09:38:17] 2026-01-09 08:37:24,928 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 09:38:17] 2026-01-09 08:37:24,928 | INFO     | update_server=False
[2026-01-09 09:38:17] 2026-01-09 08:37:24,928 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 09:38:17] 2026-01-09 08:37:24,929 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 09:38:17] 2026-01-09 08:37:24,929 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 09:38:17] 2026-01-09 08:37:24,929 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 09:38:17] 2026-01-09 08:37:24,930 | INFO     | aborting loop
[2026-01-09 09:38:17] 2026-01-09 08:37:24,984 | INFO     | all payload control threads have been joined
[2026-01-09 09:38:17] 2026-01-09 08:37:25,540 | INFO     | all job control threads have been joined
[2026-01-09 09:38:17] 2026-01-09 08:37:25,773 | INFO     | all data control threads have been joined
[2026-01-09 09:38:17] 2026-01-09 08:37:25,931 | INFO     | [job] job monitor thread has finished
[2026-01-09 09:38:17] 2026-01-09 08:37:25,934 | INFO     | [job] retrieve thread has finished
[2026-01-09 09:38:17] 2026-01-09 08:37:25,935 | INFO     | [job] queue monitor thread has finished
[2026-01-09 09:38:17] 2026-01-09 08:37:25,990 | INFO     | [payload] control thread has finished
[2026-01-09 09:38:17] 2026-01-09 08:37:26,041 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 09:38:17] 2026-01-09 08:37:26,422 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 09:38:17] 2026-01-09 08:37:26,431 | INFO     | [data] copytool_in thread has finished
[2026-01-09 09:38:17] 2026-01-09 08:37:26,510 | INFO     | [job] validate thread has finished
[2026-01-09 09:38:17] 2026-01-09 08:37:26,546 | INFO     | [job] control thread has finished
[2026-01-09 09:38:17] 2026-01-09 08:37:26,779 | INFO     | [data] control thread has finished
[2026-01-09 09:38:17] 2026-01-09 08:37:26,936 | INFO     | [data] copytool_out thread has finished
[2026-01-09 09:38:17] 2026-01-09 08:37:27,061 | INFO     | [payload] validate_post thread has finished
[2026-01-09 09:38:17] 2026-01-09 08:37:27,158 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 09:38:17] 2026-01-09 08:37:27,193 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 09:38:17] 2026-01-09 08:37:27,205 | INFO     | [payload] failed_post thread has finished
[2026-01-09 09:38:17] 2026-01-09 08:37:28,251 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 09:38:17] 2026-01-09 08:37:32,258 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 09:38:17] 2026-01-09 08:37:55,110 | INFO     | PID=4003 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-09 09:38:17] 2026-01-09 08:37:55,110 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 09:38:17] 2026-01-09 08:37:55,111 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 09:38:17] 2026-01-09 08:37:55,111 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 09:38:17] 2026-01-09 08:38:11,431 | INFO     | [monitor] cgroup control has ended
[2026-01-09 09:38:17] 2026-01-09 08:38:12,074 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139644608661312)>', '<ExcThread(monitor, started 139643790018304)>']
[2026-01-09 09:38:17] 2026-01-09 08:38:12,199 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 09:38:17] 2026-01-09 08:38:12,199 | INFO     | [monitor] control thread has ended
[2026-01-09 09:38:17] 2026-01-09 08:38:17,100 | INFO     | all workflow threads have been joined
[2026-01-09 09:38:17] 2026-01-09 08:38:17,100 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 09:38:17] 2026-01-09 08:38:17,101 | INFO     | traces error code: 0
[2026-01-09 09:38:17] 2026-01-09 08:38:17,101 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 09:38:17] 2026-01-09 08:38:17,242 [wrapper] ==== pilot stdout END ====
[2026-01-09 09:38:17] 2026-01-09 08:38:17,246 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 09:38:17] 2026-01-09 08:38:17,250 [wrapper] pilotpid: 4003
[2026-01-09 09:38:17] 2026-01-09 08:38:17,255 [wrapper] Pilot exit status: 0
[2026-01-09 09:38:17] 2026-01-09 08:38:17,273 [wrapper] pandaids: 6963148898
[2026-01-09 09:38:17] 2026-01-09 08:38:17,309 [wrapper] cleanup supervisor_pilot 27636 4004
[2026-01-09 09:38:17] 2026-01-09 08:38:17,315 [wrapper] Test setup, not cleaning
[2026-01-09 09:38:17] 2026-01-09 08:38:17,319 [wrapper] apfmon messages muted
[2026-01-09 09:38:17] 2026-01-09 08:38:17,323 [wrapper] ==== wrapper stdout END ====
[2026-01-09 09:38:17] 2026-01-09 08:38:17,326 [wrapper] ==== wrapper stderr END ====
[2026-01-09 09:38:17]  *** Error codes and diagnostics ***
[2026-01-09 09:38:17]     "exeErrorCode": 0,
[2026-01-09 09:38:17]     "exeErrorDiag": "",
[2026-01-09 09:38:17]     "pilotErrorCode": 0,
[2026-01-09 09:38:17]     "pilotErrorDiag": "",
[2026-01-09 09:38:17]  *** Listing of results directory ***
[2026-01-09 09:38:17] total 446372
[2026-01-09 09:38:17] -rw-r--r--. 1 boinc boinc      5112 Jan  8 17:02 queuedata.json
[2026-01-09 09:38:17] -rw-r--r--. 1 boinc boinc    579449 Jan  8 17:02 pilot3.tar.gz
[2026-01-09 09:38:17] -rwx------. 1 boinc boinc     36322 Jan  8 17:02 runpilot2-wrapper.sh
[2026-01-09 09:38:17] -rw-r--r--. 1 boinc boinc       100 Jan  9 06:46 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 09:38:17] -rwxr-xr-x. 1 boinc boinc      7986 Jan  9 06:46 run_atlas
[2026-01-09 09:38:17] -rw-r--r--. 1 boinc boinc       105 Jan  9 06:46 job.xml
[2026-01-09 09:38:17] -rw-r--r--. 1 boinc boinc      6390 Jan  9 06:46 init_data.xml
[2026-01-09 09:38:17] -rw-r--r--. 2 boinc boinc 223848865 Jan  9 06:46 EVNT.47898824._001114.pool.root.1
[2026-01-09 09:38:17] -rw-r--r--. 2 boinc boinc     15847 Jan  9 06:46 start_atlas.sh
[2026-01-09 09:38:17] drwxrwx--x. 2 boinc boinc        68 Jan  9 06:46 shared
[2026-01-09 09:38:17] -rw-r--r--. 2 boinc boinc    592393 Jan  9 06:46 input.tar.gz
[2026-01-09 09:38:17] -rw-r--r--. 1 boinc boinc         0 Jan  9 06:46 boinc_lockfile
[2026-01-09 09:38:17] -rw-r--r--. 1 boinc boinc      2520 Jan  9 06:46 pandaJob.out
[2026-01-09 09:38:17] -rw-------. 1 boinc boinc    989771 Jan  9 06:46 agis_schedconf.cvmfs.json
[2026-01-09 09:38:17] -rw-------. 1 boinc boinc   1516240 Jan  9 06:46 agis_ddmendpoints.agis.ALL.json
[2026-01-09 09:38:17] drwx------. 5 boinc boinc      4096 Jan  9 06:46 pilot3
[2026-01-09 09:38:17] -rw-------. 1 boinc boinc 225778093 Jan  9 09:36 HITS.47898826._028246.pool.root.1
[2026-01-09 09:38:17] -rw-r--r--. 1 boinc boinc       531 Jan  9 09:36 boinc_task_state.xml
[2026-01-09 09:38:17] -rw-------. 1 boinc boinc        95 Jan  9 09:37 pilot_heartbeat.json
[2026-01-09 09:38:17] -rw-------. 1 boinc boinc      1013 Jan  9 09:37 memory_monitor_summary.json
[2026-01-09 09:38:17] -rw-------. 1 boinc boinc    412865 Jan  9 09:37 log.47898826._028246.job.log.tgz.1
[2026-01-09 09:38:17] -rw-------. 1 boinc boinc      7773 Jan  9 09:37 heartbeat.json
[2026-01-09 09:38:17] -rw-r--r--. 1 boinc boinc      8192 Jan  9 09:37 boinc_mmap_file
[2026-01-09 09:38:17] -rw-r--r--. 1 boinc boinc        28 Jan  9 09:37 wrapper_checkpoint.txt
[2026-01-09 09:38:17] -rw-------. 1 boinc boinc      4808 Jan  9 09:38 pilotlog.txt
[2026-01-09 09:38:17] -rw-------. 1 boinc boinc   1365114 Jan  9 09:38 log.47898826._028246.job.log.1
[2026-01-09 09:38:17] -rw-------. 1 boinc boinc       357 Jan  9 09:38 output.list
[2026-01-09 09:38:17] -rw-r--r--. 1 boinc boinc       620 Jan  9 09:38 runtime_log
[2026-01-09 09:38:17] -rw-------. 1 boinc boinc   1802240 Jan  9 09:38 result.tar.gz
[2026-01-09 09:38:17] -rw-------. 1 boinc boinc       655 Jan  9 09:38 UALLDm5d7x8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm8qkKDmeFqFim.diag
[2026-01-09 09:38:17] -rw-r--r--. 1 boinc boinc      8817 Jan  9 09:38 runtime_log.err
[2026-01-09 09:38:17] -rw-r--r--. 1 boinc boinc     21194 Jan  9 09:38 stderr.txt
[2026-01-09 09:38:17] HITS file was successfully produced:
[2026-01-09 09:38:17] -rw-------. 1 boinc boinc 225778093 Jan  9 09:36 shared/HITS.pool.root.1
[2026-01-09 09:38:17]  *** Contents of shared directory: ***
[2026-01-09 09:38:17] total 441448
[2026-01-09 09:38:17] -rw-r--r--. 2 boinc boinc 223848865 Jan  9 06:46 ATLAS.root_0
[2026-01-09 09:38:17] -rw-r--r--. 2 boinc boinc     15847 Jan  9 06:46 start_atlas.sh
[2026-01-09 09:38:17] -rw-r--r--. 2 boinc boinc    592393 Jan  9 06:46 input.tar.gz
[2026-01-09 09:38:17] -rw-------. 1 boinc boinc 225778093 Jan  9 09:36 HITS.pool.root.1
[2026-01-09 09:38:17] -rw-------. 1 boinc boinc   1802240 Jan  9 09:38 result.tar.gz
09:38:18 (32668): run_atlas exited; CPU time 76766.049155
09:38:18 (32668): called boinc_finish(0)

</stderr_txt>
]]>

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