Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
08:35:44 (1775224): wrapper (7.7.26015): starting
08:35:44 (1775224): wrapper: running run_atlas (--nthreads 4)
[2026-01-09 08:35:44] Arguments: --nthreads 4
[2026-01-09 08:35:44] Threads: 4
[2026-01-09 08:35:44] Checking for CVMFS
[2026-01-09 08:35:44] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 08:35:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 08:35:44] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 08:35:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 08:35:44] 2.9.2.0 1163962 2042 90348 154936 1 57 20273182 36864001 0 130560 0 1633191 99.990 78624 5036 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-09 08:35:44] CVMFS is ok
[2026-01-09 08:35:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 08:35:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 08:35:44] Further information can be found at the LHC@home message board.
[2026-01-09 08:35:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 08:35:44] Checking for apptainer binary...
[2026-01-09 08:35:44] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 08:35:44] Running /usr/bin/apptainer --version
[2026-01-09 08:35:44] apptainer version 1.4.1-1.1
[2026-01-09 08:35:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 08:35:44] magicA244a
[2026-01-09 08:35:44] apptainer works
[2026-01-09 08:35:44] Set ATHENA_PROC_NUMBER=4
[2026-01-09 08:35:44] Set ATHENA_CORE_NUMBER=4
[2026-01-09 08:35:44] Starting ATLAS job with PandaID=6963148918
[2026-01-09 08:35:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 10:00:16]  *** The last 200 lines of the pilot log: ***
[2026-01-09 10:00:16] 2026-01-09 08:59:45,121 | INFO     | will attempt to kill all subprocesses of pid=1785573
[2026-01-09 10:00:16] 2026-01-09 08:59:45,167 | INFO     | process IDs to be killed: [1785573] (in reverse order)
[2026-01-09 10:00:16] 2026-01-09 08:59:45,195 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 10:00:16] 2026-01-09 08:59:45,195 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 10:00:16] 2026-01-09 08:59:45,196 | INFO     | did not find any defunct processes belonging to 1785573
[2026-01-09 10:00:16] 2026-01-09 08:59:45,197 | INFO     | did not find any defunct processes belonging to 1785573
[2026-01-09 10:00:16] 2026-01-09 08:59:45,197 | INFO     | ready for new job
[2026-01-09 10:00:16] 2026-01-09 08:59:45,197 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 10:00:16] 2026-01-09 08:59:45,198 | INFO     | ***************************************
[2026-01-09 10:00:16] 2026-01-09 08:59:45,198 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 10:00:16] 2026-01-09 08:59:45,198 | INFO     | ***************************************
[2026-01-09 10:00:16] 2026-01-09 08:59:45,198 | INFO     | 
[2026-01-09 10:00:16] 2026-01-09 08:59:45,199 | INFO     | architecture information:
[2026-01-09 10:00:16] 2026-01-09 08:59:45,199 | INFO     | executing command: cat /etc/os-release
[2026-01-09 10:00:16] 2026-01-09 08:59:45,208 | INFO     | cat /etc/os-release:
[2026-01-09 10:00:16] NAME="CentOS Linux"
[2026-01-09 10:00:16] VERSION="7 (Core)"
[2026-01-09 10:00:16] ID="centos"
[2026-01-09 10:00:16] ID_LIKE="rhel fedora"
[2026-01-09 10:00:16] VERSION_ID="7"
[2026-01-09 10:00:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 10:00:16] ANSI_COLOR="0;31"
[2026-01-09 10:00:16] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 10:00:16] HOME_URL="https://www.centos.org/"
[2026-01-09 10:00:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 10:00:16] 
[2026-01-09 10:00:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 10:00:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 10:00:16] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 10:00:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 10:00:16] 
[2026-01-09 10:00:16] 2026-01-09 08:59:45,208 | INFO     | ***************************************
[2026-01-09 10:00:16] 2026-01-09 08:59:45,712 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-01-09 10:00:16] 2026-01-09 08:59:45,725 | INFO     | sufficient remaining disk space (340198948864 B)
[2026-01-09 10:00:16] 2026-01-09 08:59:45,726 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 10:00:16] 2026-01-09 08:59:45,726 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 10:00:16] 2026-01-09 08:59:45,726 | INFO     | update_server=False
[2026-01-09 10:00:16] 2026-01-09 08:59:45,726 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 10:00:16] 2026-01-09 08:59:45,726 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 10:00:16] 2026-01-09 08:59:45,726 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 10:00:16] 2026-01-09 08:59:45,871 | INFO     | all job control threads have been joined
[2026-01-09 10:00:16] 2026-01-09 08:59:45,958 | INFO     | all payload control threads have been joined
[2026-01-09 10:00:16] 2026-01-09 08:59:46,022 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 10:00:16] 2026-01-09 08:59:46,023 | INFO     | aborting loop
[2026-01-09 10:00:16] 2026-01-09 08:59:46,731 | INFO     | [job] retrieve thread has finished
[2026-01-09 10:00:16] 2026-01-09 08:59:46,732 | INFO     | [job] queue monitor thread has finished
[2026-01-09 10:00:16] 2026-01-09 08:59:46,770 | INFO     | all data control threads have been joined
[2026-01-09 10:00:16] 2026-01-09 08:59:46,855 | INFO     | [payload] failed_post thread has finished
[2026-01-09 10:00:16] 2026-01-09 08:59:46,877 | INFO     | [job] control thread has finished
[2026-01-09 10:00:16] 2026-01-09 08:59:46,961 | INFO     | [payload] control thread has finished
[2026-01-09 10:00:16] 2026-01-09 08:59:47,028 | INFO     | [job] job monitor thread has finished
[2026-01-09 10:00:16] 2026-01-09 08:59:47,040 | INFO     | [data] copytool_in thread has finished
[2026-01-09 10:00:16] 2026-01-09 08:59:47,232 | INFO     | [job] validate thread has finished
[2026-01-09 10:00:16] 2026-01-09 08:59:47,313 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 10:00:16] 2026-01-09 08:59:47,336 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 10:00:16] 2026-01-09 08:59:47,390 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 10:00:16] 2026-01-09 08:59:47,732 | INFO     | [data] copytool_out thread has finished
[2026-01-09 10:00:16] 2026-01-09 08:59:47,776 | INFO     | [data] control thread has finished
[2026-01-09 10:00:16] 2026-01-09 08:59:47,943 | INFO     | [payload] validate_post thread has finished
[2026-01-09 10:00:16] 2026-01-09 08:59:48,728 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 10:00:16] 2026-01-09 08:59:52,734 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 10:00:16] 2026-01-09 08:59:56,087 | INFO     | job.realtimelogging is not enabled
[2026-01-09 10:00:16] 2026-01-09 08:59:56,524 | INFO     | [monitor] cgroup control has ended
[2026-01-09 10:00:16] 2026-01-09 08:59:57,093 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 10:00:16] 2026-01-09 08:59:58,827 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140067575531328)>', '<ExcThread(monitor, started 140066726864640)>']
[2026-01-09 10:00:16] 2026-01-09 09:00:03,852 | INFO     | all workflow threads have been joined
[2026-01-09 10:00:16] 2026-01-09 09:00:03,853 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 10:00:16] 2026-01-09 09:00:03,853 | INFO     | traces error code: 0
[2026-01-09 10:00:16] 2026-01-09 09:00:03,853 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 10:00:16] 2026-01-09 09:00:16,785 | INFO     | PID=1779007 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 10:00:16] 2026-01-09 09:00:16,785 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 10:00:16] 2026-01-09 09:00:16,786 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 10:00:16] 2026-01-09 09:00:16,786 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 10:00:16] 2026-01-09 09:00:16,786 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 10:00:16] 2026-01-09 09:00:16,786 | INFO     | [monitor] control thread has ended
[2026-01-09 10:00:16] 2026-01-09 09:00:16,837 [wrapper] ==== pilot stdout END ====
[2026-01-09 10:00:16] 2026-01-09 09:00:16,839 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 10:00:16] 2026-01-09 09:00:16,841 [wrapper] pilotpid: 1779007
[2026-01-09 10:00:16] 2026-01-09 09:00:16,844 [wrapper] Pilot exit status: 0
[2026-01-09 10:00:16] 2026-01-09 09:00:16,852 [wrapper] pandaids: 6963148918
[2026-01-09 10:00:16] 2026-01-09 09:00:16,869 [wrapper] cleanup supervisor_pilot 1798765 1779008
[2026-01-09 10:00:16] 2026-01-09 09:00:16,872 [wrapper] Test setup, not cleaning
[2026-01-09 10:00:16] 2026-01-09 09:00:16,874 [wrapper] apfmon messages muted
[2026-01-09 10:00:16] 2026-01-09 09:00:16,877 [wrapper] ==== wrapper stdout END ====
[2026-01-09 10:00:16] 2026-01-09 09:00:16,879 [wrapper] ==== wrapper stderr END ====
[2026-01-09 10:00:16]  *** Error codes and diagnostics ***
[2026-01-09 10:00:16]     "exeErrorCode": 0,
[2026-01-09 10:00:16]     "exeErrorDiag": "",
[2026-01-09 10:00:16]     "pilotErrorCode": 0,
[2026-01-09 10:00:16]     "pilotErrorDiag": "",
[2026-01-09 10:00:16]  *** Listing of results directory ***
[2026-01-09 10:00:16] total 437500
[2026-01-09 10:00:16] -rw-r--r-- 1 boinc boinc      5112 Jan  8 17:02 queuedata.json
[2026-01-09 10:00:16] -rw-r--r-- 1 boinc boinc    579449 Jan  8 17:02 pilot3.tar.gz
[2026-01-09 10:00:16] -rwx------ 1 boinc boinc     36322 Jan  8 17:02 runpilot2-wrapper.sh
[2026-01-09 10:00:16] -rw-r--r-- 1 boinc boinc       100 Jan  9 08:35 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 10:00:16] -rwxr-xr-x 1 boinc boinc      7986 Jan  9 08:35 run_atlas
[2026-01-09 10:00:16] -rw-r--r-- 1 boinc boinc       105 Jan  9 08:35 job.xml
[2026-01-09 10:00:16] -rw-r--r-- 2 boinc boinc 224453097 Jan  9 08:35 EVNT.47898824._001115.pool.root.1
[2026-01-09 10:00:16] -rw-r--r-- 2 boinc boinc    592394 Jan  9 08:35 input.tar.gz
[2026-01-09 10:00:16] -rw-r--r-- 2 boinc boinc     15847 Jan  9 08:35 start_atlas.sh
[2026-01-09 10:00:16] drwxrwx--x 2 boinc boinc      4096 Jan  9 08:35 shared
[2026-01-09 10:00:16] -rw-r--r-- 1 boinc boinc         0 Jan  9 08:35 boinc_setup_complete
[2026-01-09 10:00:16] -rw-r--r-- 1 boinc boinc      6438 Jan  9 08:35 init_data.xml
[2026-01-09 10:00:16] -rw-r--r-- 1 boinc boinc         0 Jan  9 08:35 boinc_lockfile
[2026-01-09 10:00:16] -rw-r--r-- 1 boinc boinc      2520 Jan  9 08:35 pandaJob.out
[2026-01-09 10:00:16] -rw------- 1 boinc boinc    989771 Jan  9 08:35 agis_schedconf.cvmfs.json
[2026-01-09 10:00:16] -rw------- 1 boinc boinc   1516240 Jan  9 08:35 agis_ddmendpoints.agis.ALL.json
[2026-01-09 10:00:16] drwx------ 5 boinc boinc      4096 Jan  9 08:35 pilot3
[2026-01-09 10:00:16] -rw------- 1 boinc boinc 217613428 Jan  9 09:59 HITS.47898826._028266.pool.root.1
[2026-01-09 10:00:16] -rw-r--r-- 1 boinc boinc       530 Jan  9 09:59 boinc_task_state.xml
[2026-01-09 10:00:16] -rw------- 1 boinc boinc      1015 Jan  9 09:59 memory_monitor_summary.json
[2026-01-09 10:00:16] -rw------- 1 boinc boinc    276791 Jan  9 09:59 log.47898826._028266.job.log.tgz.1
[2026-01-09 10:00:16] -rw------- 1 boinc boinc      7761 Jan  9 09:59 heartbeat.json
[2026-01-09 10:00:16] -rw-r--r-- 1 boinc boinc      8192 Jan  9 10:00 boinc_mmap_file
[2026-01-09 10:00:16] -rw-r--r-- 1 boinc boinc        27 Jan  9 10:00 wrapper_checkpoint.txt
[2026-01-09 10:00:16] -rw------- 1 boinc boinc       747 Jan  9 10:00 pilotlog.txt
[2026-01-09 10:00:16] -rw------- 1 boinc boinc        95 Jan  9 10:00 pilot_heartbeat.json
[2026-01-09 10:00:16] -rw------- 1 boinc boinc    737430 Jan  9 10:00 log.47898826._028266.job.log.1
[2026-01-09 10:00:16] -rw------- 1 boinc boinc       357 Jan  9 10:00 output.list
[2026-01-09 10:00:16] -rw-r--r-- 1 boinc boinc       620 Jan  9 10:00 runtime_log
[2026-01-09 10:00:16] -rw------- 1 boinc boinc   1034240 Jan  9 10:00 result.tar.gz
[2026-01-09 10:00:16] -rw-r--r-- 1 boinc boinc      8917 Jan  9 10:00 runtime_log.err
[2026-01-09 10:00:16] -rw------- 1 boinc boinc       662 Jan  9 10:00 Z0dLDm5d7x8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmHrkKDmkThETm.diag
[2026-01-09 10:00:16] -rw-r--r-- 1 boinc boinc     10293 Jan  9 10:00 stderr.txt
[2026-01-09 10:00:16] HITS file was successfully produced:
[2026-01-09 10:00:16] -rw------- 1 boinc boinc 217613428 Jan  9 09:59 shared/HITS.pool.root.1
[2026-01-09 10:00:16]  *** Contents of shared directory: ***
[2026-01-09 10:00:16] total 433328
[2026-01-09 10:00:16] -rw-r--r-- 2 boinc boinc 224453097 Jan  9 08:35 ATLAS.root_0
[2026-01-09 10:00:16] -rw-r--r-- 2 boinc boinc    592394 Jan  9 08:35 input.tar.gz
[2026-01-09 10:00:16] -rw-r--r-- 2 boinc boinc     15847 Jan  9 08:35 start_atlas.sh
[2026-01-09 10:00:16] -rw------- 1 boinc boinc 217613428 Jan  9 09:59 HITS.pool.root.1
[2026-01-09 10:00:16] -rw------- 1 boinc boinc   1034240 Jan  9 10:00 result.tar.gz
10:00:18 (1775224): run_atlas exited; CPU time 19240.324760
10:00:18 (1775224): called boinc_finish(0)

</stderr_txt>
]]>

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