Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2026-01-09 14:06:08 (12900): vboxwrapper version 26210
2026-01-09 14:06:08 (12900): BOINC client version: 8.0.2
2026-01-09 14:06:09 (12900): Detected: VirtualBox VboxManage Interface (Version: 7.0.8)
2026-01-09 14:06:09 (12900): Successfully copied 'init_data.xml' to the shared directory.
2026-01-09 14:06:09 (12900): Create VM. (boinc_5449522493ecd2ae, slot#8)
2026-01-09 14:06:10 (12900): Setting Memory Size for VM. (4800MB)
2026-01-09 14:06:10 (12900): Setting CPU Count for VM. (8)
2026-01-09 14:06:10 (12900): Setting Chipset Options for VM.
2026-01-09 14:06:10 (12900): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-01-09 14:06:11 (12900): Setting Boot Options for VM.
2026-01-09 14:06:11 (12900): Setting Network Configuration for NAT. (Driver: virtio)
2026-01-09 14:06:11 (12900): Enabling VM Network Access.
2026-01-09 14:06:12 (12900): Disabling USB Support for VM.
2026-01-09 14:06:12 (12900): Disabling COM Port Support for VM.
2026-01-09 14:06:12 (12900): Disabling LPT Port Support for VM.
2026-01-09 14:06:12 (12900): Disabling Audio Support for VM.
2026-01-09 14:06:13 (12900): Disabling Clipboard Support for VM.
2026-01-09 14:06:13 (12900): Disabling Drag and Drop Support for VM.
2026-01-09 14:06:13 (12900): Adding storage controller(s) to VM.
2026-01-09 14:06:14 (12900): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-01-09 14:06:16 (12900): Adding VirtualBox Guest Additions to VM.
2026-01-09 14:06:16 (12900): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-01-09 14:06:16 (12900): forwarding host port 53918 to guest port 80
2026-01-09 14:06:16 (12900): Enabling remote desktop for VM.
2026-01-09 14:06:17 (12900): Required extension pack not installed, remote desktop not enabled.
2026-01-09 14:06:17 (12900): Enabling shared directory for VM.
2026-01-09 14:06:17 (12900): Starting VM using VBoxManage interface. (boinc_5449522493ecd2ae, slot#8)
2026-01-09 14:06:24 (12900): Successfully started VM. (PID = '8380')
2026-01-09 14:06:24 (12900): Reporting VM Process ID to BOINC.
2026-01-09 14:06:24 (12900): Guest Log: BIOS: VirtualBox 7.0.8
2026-01-09 14:06:24 (12900): Guest Log: CPUID EDX: 0x178bfbff
2026-01-09 14:06:24 (12900): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-01-09 14:06:24 (12900): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-01-09 14:06:24 (12900): VM state change detected. (old = 'poweredoff', new = 'running')
2026-01-09 14:06:24 (12900): Detected: Web Application Enabled (http://localhost:53918)
2026-01-09 14:06:24 (12900): Preference change detected
2026-01-09 14:06:24 (12900): Setting CPU throttle for VM. (99%)
2026-01-09 14:06:24 (12900): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-01-09 14:06:26 (12900): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-01-09 14:06:26 (12900): Guest Log: BIOS: Booting from Hard Disk...
2026-01-09 14:06:29 (12900): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-01-09 14:06:29 (12900): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-01-09 14:06:29 (12900): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-01-09 14:06:29 (12900): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-01-09 14:06:29 (12900): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-01-09 14:06:29 (12900): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-01-09 14:06:29 (12900): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-01-09 14:06:29 (12900): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-01-09 14:06:29 (12900): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-01-09 14:06:29 (12900): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-01-09 14:06:29 (12900): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-01-09 14:06:29 (12900): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-01-09 14:06:29 (12900): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-01-09 14:06:29 (12900): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-01-09 14:06:29 (12900): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-01-09 14:06:29 (12900): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-01-09 14:06:29 (12900): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-01-09 14:06:29 (12900): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-01-09 14:06:29 (12900): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-01-09 14:06:29 (12900): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-01-09 14:06:29 (12900): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-01-09 14:06:29 (12900): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-01-09 14:06:29 (12900): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-01-09 14:06:29 (12900): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-01-09 14:06:29 (12900): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-01-09 14:06:29 (12900): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-01-09 14:06:29 (12900): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-01-09 14:06:29 (12900): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-01-09 14:06:29 (12900): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-01-09 14:06:29 (12900): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-01-09 14:06:29 (12900): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-01-09 14:06:29 (12900): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-01-09 14:06:37 (12900): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-01-09 14:06:37 (12900): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-01-09 14:06:45 (12900): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-01-09 14:06:45 (12900): Guest Log: 00:00:00.000196 main     Log opened 2026-01-09T14:06:43.328190000Z
2026-01-09 14:06:45 (12900): Guest Log: 00:00:00.000459 main     OS Product: Linux
2026-01-09 14:06:45 (12900): Guest Log: 00:00:00.000507 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-01-09 14:06:45 (12900): Guest Log: 00:00:00.000553 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-01-09 14:06:45 (12900): Guest Log: 00:00:00.000590 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-01-09 14:06:45 (12900): Guest Log: 00:00:00.000591 main     Process ID: 1368
2026-01-09 14:06:45 (12900): Guest Log: 00:00:00.000592 main     Package type: LINUX_64BITS_GENERIC
2026-01-09 14:06:45 (12900): Guest Log: 00:00:00.001954 main     5.2.32 r132073 started. Verbose level = 0
2026-01-09 14:06:45 (12900): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-01-09 14:06:45 (12900): Guest Log: [INFO] Mounting shared directory
2026-01-09 14:06:45 (12900): Guest Log: [INFO] Checking for init_data.xml
2026-01-09 14:06:53 (12900): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-01-09 14:06:53 (12900): Guest Log: [INFO] Detected branch: prod
2026-01-09 14:06:53 (12900): Guest Log: This is the prod version of the ATLAS job wrapper
2026-01-09 14:06:53 (12900): Guest Log: Copying input files
2026-01-09 14:06:55 (12900): Guest Log: Copied input files into RunAtlas.
2026-01-09 14:06:55 (12900): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-01-09 14:06:55 (12900): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-01-09 14:06:55 (12900): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-01-09 14:06:55 (12900): Guest Log: Further information can be found at the LHC@home message board.
2026-01-09 14:06:55 (12900): Guest Log: 00:00:10.004205 timesync vgsvcTimeSyncWorker: Radical guest time change: -39 588 767 446 000ns (GuestNow=1 767 928 014 563 862 000 ns GuestLast=1 767 967 603 331 308 000 ns fSetTimeLastLoop=true )
2026-01-09 14:07:37 (12900): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-01-09 14:07:38 (12900): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-01-09 14:07:38 (12900): Guest Log: 2.6.3.0 1650 0 30336 154928 3 1 3120734 4096000 0 65024 0 0 n/a 1336 40 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2026-01-09 14:07:39 (12900): Guest Log: copied the webapp to /var/www
2026-01-09 14:07:39 (12900): Guest Log: ATHENA_PROC_NUMBER=8
2026-01-09 14:07:39 (12900): Guest Log: ATHENA_CORE_NUMBER=8
2026-01-09 14:07:39 (12900): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-01-09 14:07:39 (12900): Guest Log:  *** Starting ATLAS job. (PandaID=6963149078 taskID=47898826) ***
2026-01-09 15:46:47 (12900): Status Report: Elapsed Time: '6000.000000'
2026-01-09 15:46:47 (12900): Status Report: CPU Time: '37200.953125'
2026-01-09 17:27:11 (12900): Status Report: Elapsed Time: '12000.000000'
2026-01-09 17:27:11 (12900): Status Report: CPU Time: '80507.796875'
2026-01-09 19:07:37 (12900): Status Report: Elapsed Time: '18000.000000'
2026-01-09 19:07:37 (12900): Status Report: CPU Time: '123085.843750'
2026-01-09 19:48:20 (12900): Guest Log:  *** Job finished ***
2026-01-09 19:48:20 (12900): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-01-09 19:48:20 (12900): Guest Log: 2026-01-09 08:48:11,432 | INFO     | all workflow threads have been joined
2026-01-09 19:48:20 (12900): Guest Log: 2026-01-09 08:48:11,432 | INFO     | end of generic workflow (traces error code: 0)
2026-01-09 19:48:20 (12900): Guest Log: 2026-01-09 08:48:11,432 | INFO     | traces error code: 0
2026-01-09 19:48:20 (12900): Guest Log: 2026-01-09 08:48:11,432 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-01-09 19:48:20 (12900): Guest Log: 2026-01-09 08:48:18,468 | INFO     | PID=6102 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2026-01-09 19:48:20 (12900): Guest Log: 2026-01-09 08:48:18,469 | INFO     | found 0 job(s) in 20 queues
2026-01-09 19:48:20 (12900): Guest Log: 2026-01-09 08:48:18,469 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-01-09 19:48:20 (12900): Guest Log: 2026-01-09 08:48:18,469 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-01-09 19:48:20 (12900): Guest Log: 2026-01-09 08:48:18,469 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-01-09 19:48:20 (12900): Guest Log: 2026-01-09 08:48:18,469 | INFO     | [monitor] control thread has ended
2026-01-09 19:48:20 (12900): Guest Log: 2026-01-09 08:48:18,579 [wrapper] ==== pilot stdout END ====
2026-01-09 19:48:20 (12900): Guest Log: 2026-01-09 08:48:18,584 [wrapper] ==== wrapper stdout RESUME ====
2026-01-09 19:48:20 (12900): Guest Log: 2026-01-09 08:48:18,589 [wrapper] pilotpid: 6102
2026-01-09 19:48:20 (12900): Guest Log: 2026-01-09 08:48:18,594 [wrapper] Pilot exit status: 0
2026-01-09 19:48:20 (12900): Guest Log: 2026-01-09 08:48:18,650 [wrapper] pandaids: 6963149078
2026-01-09 19:48:20 (12900): Guest Log: 2026-01-09 08:48:18,695 [wrapper] cleanup supervisor_pilot 19354 6103
2026-01-09 19:48:20 (12900): Guest Log: 2026-01-09 08:48:18,701 [wrapper] Test setup, not cleaning
2026-01-09 19:48:20 (12900): Guest Log: 2026-01-09 08:48:18,708 [wrapper] apfmon messages muted
2026-01-09 19:48:20 (12900): Guest Log: 2026-01-09 08:48:18,713 [wrapper] ==== wrapper stdout END ====
2026-01-09 19:48:20 (12900): Guest Log: 2026-01-09 08:48:18,718 [wrapper] ==== wrapper stderr END ====
2026-01-09 19:48:20 (12900): Guest Log:  *** Error codes and diagnostics ***
2026-01-09 19:48:21 (12900): Guest Log:     "exeErrorCode": 0,
2026-01-09 19:48:21 (12900): Guest Log:     "exeErrorDiag": "",
2026-01-09 19:48:21 (12900): Guest Log:     "pilotErrorCode": 0,
2026-01-09 19:48:21 (12900): Guest Log:     "pilotErrorDiag": "",
2026-01-09 19:48:21 (12900): Guest Log:  *** Listing of results directory ***
2026-01-09 19:48:21 (12900): Guest Log: total 222404
2026-01-09 19:48:21 (12900): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Jan  8 16:02 queuedata.json
2026-01-09 19:48:21 (12900): Guest Log: -rw-r--r--. 1 atlas atlas    579449 Jan  8 16:02 pilot3.tar.gz
2026-01-09 19:48:21 (12900): Guest Log: -rwx------. 1 atlas atlas     36322 Jan  8 16:02 runpilot2-wrapper.sh
2026-01-09 19:48:21 (12900): Guest Log: -rwxr-xr-x. 1 atlas atlas      8838 Jan  9 03:06 init_data.xml
2026-01-09 19:48:21 (12900): Guest Log: -rwxr-xr-x. 1 atlas atlas    592395 Jan  9 03:06 input.tar.gz
2026-01-09 19:48:21 (12900): Guest Log: -rwxr-xr-x. 1 atlas atlas     15847 Jan  9 03:06 start_atlas.sh
2026-01-09 19:48:21 (12900): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jan  9 03:06 EVNT.47898824._001084.pool.root.1 -> /data/./ATLAS.root_0
2026-01-09 19:48:21 (12900): Guest Log: -rw-r--r--. 1 atlas atlas      2520 Jan  9 03:07 pandaJob.out
2026-01-09 19:48:21 (12900): Guest Log: -rw-------. 1 atlas atlas    989763 Jan  9 03:08 agis_schedconf.cvmfs.json
2026-01-09 19:48:21 (12900): Guest Log: drwx------. 5 atlas atlas      4096 Jan  9 03:08 pilot3
2026-01-09 19:48:21 (12900): Guest Log: -rw-------. 1 atlas atlas 217678057 Jan  9 08:46 HITS.47898826._028426.pool.root.1
2026-01-09 19:48:21 (12900): Guest Log: -rw-------. 1 atlas atlas      1033 Jan  9 08:47 memory_monitor_summary.json
2026-01-09 19:48:21 (12900): Guest Log: -rw-------. 1 atlas atlas        95 Jan  9 08:47 pilot_heartbeat.json
2026-01-09 19:48:21 (12900): Guest Log: -rw-------. 1 atlas atlas   1516240 Jan  9 08:47 agis_ddmendpoints.agis.ALL.json
2026-01-09 19:48:21 (12900): Guest Log: -rw-------. 1 atlas atlas    524148 Jan  9 08:47 log.47898826._028426.job.log.tgz.1
2026-01-09 19:48:21 (12900): Guest Log: -rw-------. 1 atlas atlas      7837 Jan  9 08:47 heartbeat.json
2026-01-09 19:48:21 (12900): Guest Log: -rw-------. 1 atlas atlas       744 Jan  9 08:48 pilotlog.txt
2026-01-09 19:48:21 (12900): Guest Log: -rw-------. 1 atlas atlas   2585678 Jan  9 08:48 log.47898826._028426.job.log.1
2026-01-09 19:48:21 (12900): Guest Log: -rw-------. 1 atlas atlas       357 Jan  9 08:48 output.list
2026-01-09 19:48:21 (12900): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jan  9 08:48 runtime_log
2026-01-09 19:48:21 (12900): Guest Log: -rw-------. 1 atlas atlas   3133440 Jan  9 08:48 result.tar.gz
2026-01-09 19:48:21 (12900): Guest Log: -rw-r--r--. 1 atlas atlas      8756 Jan  9 08:48 runtime_log.err
2026-01-09 19:48:21 (12900): Guest Log: -rw-------. 1 atlas atlas       662 Jan  9 08:48 akiNDm5d7x8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm5dfKDm934Idm.diag
2026-01-09 19:48:21 (12900): Guest Log: Looking for outputfile HITS.47898826._028426.pool.root.1
2026-01-09 19:48:21 (12900): Guest Log: HITS file was successfully produced
2026-01-09 19:48:21 (12900): Guest Log: -rw-------. 1 atlas atlas 217678057 Jan  9 08:46 /home/atlas/RunAtlas/HITS.47898826._028426.pool.root.1
2026-01-09 19:48:22 (12900): Guest Log: Successfully finished the ATLAS job!
2026-01-09 19:48:22 (12900): Guest Log: Copying the results back to the shared directory!
2026-01-09 19:48:22 (12900): Guest Log:  *** Contents of shared directory: ***
2026-01-09 19:48:22 (12900): Guest Log: total 437384
2026-01-09 19:48:22 (12900): Guest Log: -rwxrwxrwx. 1 root root 226441236 Jan  9 03:06 ATLAS.root_0
2026-01-09 19:48:22 (12900): Guest Log: -rwxrwxrwx. 1 root root 217678057 Jan  9 08:48 HITS.pool.root.1
2026-01-09 19:48:22 (12900): Guest Log: -rwxrwxrwx. 1 root root      8838 Jan  9 03:06 init_data.xml
2026-01-09 19:48:22 (12900): Guest Log: -rwxrwxrwx. 1 root root    592395 Jan  9 02:38 input.tar.gz
2026-01-09 19:48:22 (12900): Guest Log: -rwxrwxrwx. 1 root root   3133440 Jan  9 08:48 result.tar.gz
2026-01-09 19:48:22 (12900): Guest Log: -rwxrwxrwx. 1 root root     15847 Jan  9 02:38 start_atlas.sh
2026-01-09 19:48:22 (12900): Guest Log:  *** Success! Shutting down the machine. ***
2026-01-09 19:48:22 (12900): VM Completion File Detected.
2026-01-09 19:48:22 (12900): Powering off VM.
2026-01-09 19:48:23 (12900): Successfully stopped VM.
2026-01-09 19:48:23 (12900): Deregistering VM. (boinc_5449522493ecd2ae, slot#8)
2026-01-09 19:48:23 (12900): Removing network bandwidth throttle group from VM.
2026-01-09 19:48:24 (12900): Removing VM from VirtualBox.
2026-01-09 19:48:29 (12900): called boinc_finish(0)

</stderr_txt>
]]>

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